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Overview

ID MAG02041
Name LYD2_bin.16
Sample SMP0053
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Bacteroidales
Family VadinHA17
Genus LD21
Species
Assembly information
Completeness (%) 95.9
Contamination (%) 2.64
GC content (%) 41.0
N50 (bp) 15,449
Genome size (bp) 3,828,161

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3195

Gene name Description KEGG GOs EC E-value Score Sequence
LYD2_k127_1005006_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 498.0
LYD2_k127_1005006_1 Mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 410.0
LYD2_k127_1005006_10 gliding motility - - - 0.000000000000000000000000000000000000000000000000000000000000000006536 234.0
LYD2_k127_1005006_11 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000002069 188.0
LYD2_k127_1005006_12 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000001147 139.0
LYD2_k127_1005006_13 Glycosyl transferase family 1 - - - 0.0000004119 54.0
LYD2_k127_1005006_14 Domain of unknown function (DUF4296) - - - 0.0001053 53.0
LYD2_k127_1005006_2 Efflux ABC transporter, permease protein K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 383.0
LYD2_k127_1005006_3 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 361.0
LYD2_k127_1005006_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 375.0
LYD2_k127_1005006_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 315.0
LYD2_k127_1005006_6 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 310.0
LYD2_k127_1005006_7 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 306.0
LYD2_k127_1005006_8 Gliding motility-associated protein GldM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004268 291.0
LYD2_k127_1005006_9 amidohydrolase K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007407 289.0
LYD2_k127_1021127_0 UPF0761 membrane protein K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 368.0
LYD2_k127_1021127_1 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000000005646 228.0
LYD2_k127_1021127_2 Pfam Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000001638 192.0
LYD2_k127_1021127_3 Protein of unknown function (DUF452) K09789 - 3.1.1.85 0.000000000000000000000000000000000003074 146.0
LYD2_k127_1021127_4 - - - - 0.00000000000000000000000000000000001466 141.0
LYD2_k127_1047533_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 575.0
LYD2_k127_1047533_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 559.0
LYD2_k127_1047533_2 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 300.0
LYD2_k127_1047533_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000001752 176.0
LYD2_k127_1047533_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000006747 108.0
LYD2_k127_1047685_0 RNA methyltransferase, RsmD family K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000004889 195.0
LYD2_k127_1047685_1 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K01144 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000002424 189.0
LYD2_k127_1047685_2 Protein of unknown function (DUF3822) - - - 0.000000000000000000004425 103.0
LYD2_k127_1054726_0 FtsX-like permease family K02004 - - 3.238e-227 728.0
LYD2_k127_1054726_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 1.149e-220 688.0
LYD2_k127_1054726_10 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000001277 149.0
LYD2_k127_1054726_11 Magnesium chelatase, subunit ChlI - - - 0.000001449 50.0
LYD2_k127_1054726_2 permease K02004 - - 7.099e-212 684.0
LYD2_k127_1054726_3 Psort location Extracellular, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 533.0
LYD2_k127_1054726_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 375.0
LYD2_k127_1054726_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 375.0
LYD2_k127_1054726_6 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 345.0
LYD2_k127_1054726_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 322.0
LYD2_k127_1054726_8 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000002802 214.0
LYD2_k127_1054726_9 permease K02004 - - 0.000000000000000000000000000000000000001073 170.0
LYD2_k127_1060781_0 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01535 - 3.6.3.6 0.0 1100.0
LYD2_k127_1060781_1 Beta-lactamase K21469 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 525.0
LYD2_k127_1060781_10 transcriptional regulator K07722 - - 0.0000000000000000000000000000000000000000000000000004394 187.0
LYD2_k127_1060781_11 PFAM Cobalt transport protein K02008 - - 0.0000000000000000000000004602 116.0
LYD2_k127_1060781_12 PDGLE domain - - - 0.00000000000000006969 85.0
LYD2_k127_1060781_13 Haem-binding domain - - - 0.00008576 51.0
LYD2_k127_1060781_2 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 472.0
LYD2_k127_1060781_3 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 325.0
LYD2_k127_1060781_4 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 303.0
LYD2_k127_1060781_5 AAA domain, putative AbiEii toxin, Type IV TA system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007507 277.0
LYD2_k127_1060781_6 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003904 263.0
LYD2_k127_1060781_7 (ABC) transporter K02471,K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000104 247.0
LYD2_k127_1060781_8 cobalt ion transport K02007 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000003465 235.0
LYD2_k127_1060781_9 Methyltransferase FkbM family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009884 238.0
LYD2_k127_1077356_0 TonB dependent receptor K02014 - - 3.79e-201 646.0
LYD2_k127_1077356_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 554.0
LYD2_k127_1077356_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 398.0
LYD2_k127_1079415_0 Dihydroxyacetone kinase family K07030 - - 3.496e-207 660.0
LYD2_k127_1079415_1 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 364.0
LYD2_k127_1079415_2 epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 317.0
LYD2_k127_1079415_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004425 286.0
LYD2_k127_1079415_4 HlyD family secretion protein - - - 0.00000000000000000000000000001056 126.0
LYD2_k127_1079415_5 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000944 119.0
LYD2_k127_1079415_6 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000004033 113.0
LYD2_k127_1079415_7 Protein of unknown function (DUF1616) - - - 0.00000000000001075 87.0
LYD2_k127_1079415_8 Protein of unknown function (DUF1616) - - - 0.0000001628 63.0
LYD2_k127_1098826_0 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - 0.0 1417.0
LYD2_k127_1098826_1 SusD family K21572 - - 8.513e-259 810.0
LYD2_k127_1098826_10 Phosphodiester glycosidase - - - 0.000000006312 57.0
LYD2_k127_1098826_11 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000006355 52.0
LYD2_k127_1098826_12 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.00003771 48.0
LYD2_k127_1098826_2 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 382.0
LYD2_k127_1098826_3 PFAM Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 364.0
LYD2_k127_1098826_4 PFAM Receptor L domain - - - 0.000000000000000000000001192 107.0
LYD2_k127_1098826_5 COGs COG5616 integral membrane protein - - - 0.00000000000000000000006307 115.0
LYD2_k127_1098826_6 DUF218 domain - - - 0.00000000000004392 76.0
LYD2_k127_1098826_7 Phosphodiester glycosidase - - - 0.00000000000006155 73.0
LYD2_k127_1098826_8 Tetratricopeptide repeat - - - 0.0000000000001373 84.0
LYD2_k127_1098826_9 Chlorite dismutase - - - 0.0000000000008787 72.0
LYD2_k127_1224213_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 568.0
LYD2_k127_1224213_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 453.0
LYD2_k127_1224213_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 387.0
LYD2_k127_1224213_3 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 330.0
LYD2_k127_1224213_4 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.00000000000000000000000000000001004 128.0
LYD2_k127_1224213_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000004301 136.0
LYD2_k127_123929_0 Fibronectin type 3 domain K21571 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 374.0
LYD2_k127_123929_1 Transcriptional regulator - - - 0.0000000000000000000000000000001038 132.0
LYD2_k127_123929_2 Heat shock protein - - - 0.00001316 53.0
LYD2_k127_123929_3 Sporulation related domain - - - 0.0007132 48.0
LYD2_k127_125166_0 cystathionine gamma-synthase activity K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 373.0
LYD2_k127_125166_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 359.0
LYD2_k127_125166_2 Bacterial SH3 domain - - - 0.00000000000000000000000000000000000000000000000003642 186.0
LYD2_k127_125248_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 342.0
LYD2_k127_125248_1 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 325.0
LYD2_k127_125248_2 Involved in the TonB-independent uptake of proteins K03641 - - 0.0008097 47.0
LYD2_k127_1266901_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 9.327e-200 649.0
LYD2_k127_1266901_1 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 543.0
LYD2_k127_1266901_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 344.0
LYD2_k127_1266901_3 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 338.0
LYD2_k127_1266901_4 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 332.0
LYD2_k127_1266901_5 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000625 217.0
LYD2_k127_1266901_6 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000003698 198.0
LYD2_k127_1266901_7 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000003038 177.0
LYD2_k127_1276396_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1187.0
LYD2_k127_1276396_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1019.0
LYD2_k127_1276396_10 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 544.0
LYD2_k127_1276396_11 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 456.0
LYD2_k127_1276396_12 Ribosomal Proteins L2, C-terminal domain K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 438.0
LYD2_k127_1276396_13 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008613 451.0
LYD2_k127_1276396_14 TIGRFAM gliding motility-associated protein GldE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 432.0
LYD2_k127_1276396_15 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 417.0
LYD2_k127_1276396_16 amino acid aldolase or racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 394.0
LYD2_k127_1276396_17 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 376.0
LYD2_k127_1276396_18 metallocarboxypeptidase activity K06987,K07752 - 3.4.17.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 374.0
LYD2_k127_1276396_19 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 353.0
LYD2_k127_1276396_2 Elongation factor G, domain IV K02355 - - 2.164e-311 968.0
LYD2_k127_1276396_20 OmpA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 338.0
LYD2_k127_1276396_21 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 314.0
LYD2_k127_1276396_22 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000883 321.0
LYD2_k127_1276396_23 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 314.0
LYD2_k127_1276396_24 ribosomal L5P family C-terminus K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 289.0
LYD2_k127_1276396_25 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 291.0
LYD2_k127_1276396_26 Ribosomal protein L3 K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 288.0
LYD2_k127_1276396_27 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 282.0
LYD2_k127_1276396_28 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009689 258.0
LYD2_k127_1276396_29 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000129 243.0
LYD2_k127_1276396_3 DNA helicase K03657 - 3.6.4.12 3.816e-274 863.0
LYD2_k127_1276396_30 Ribosomal protein S7p/S5e K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000004725 240.0
LYD2_k127_1276396_31 Ribosomal protein S12/S23 K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000001638 236.0
LYD2_k127_1276396_32 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000000000000000000005078 228.0
LYD2_k127_1276396_33 - - - - 0.0000000000000000000000000000000000000000000000000000000000000012 228.0
LYD2_k127_1276396_34 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000167 226.0
LYD2_k127_1276396_35 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000008629 217.0
LYD2_k127_1276396_36 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000102 215.0
LYD2_k127_1276396_37 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000003755 212.0
LYD2_k127_1276396_38 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001278 205.0
LYD2_k127_1276396_39 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000005823 215.0
LYD2_k127_1276396_4 Belongs to the UbiD family K03182 - 4.1.1.98 1.907e-208 665.0
LYD2_k127_1276396_40 50S ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001403 199.0
LYD2_k127_1276396_41 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000008986 194.0
LYD2_k127_1276396_42 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000001717 194.0
LYD2_k127_1276396_43 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001524 186.0
LYD2_k127_1276396_44 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000002784 177.0
LYD2_k127_1276396_45 Gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000000002501 180.0
LYD2_k127_1276396_46 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000002039 186.0
LYD2_k127_1276396_47 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000002164 164.0
LYD2_k127_1276396_48 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000000000003251 159.0
LYD2_k127_1276396_49 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000003212 159.0
LYD2_k127_1276396_5 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.92e-208 653.0
LYD2_k127_1276396_50 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001554 148.0
LYD2_k127_1276396_51 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000009169 146.0
LYD2_k127_1276396_52 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000001096 147.0
LYD2_k127_1276396_53 Translation initiation factor 1A / IF-1 K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000001678 144.0
LYD2_k127_1276396_54 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000005048 143.0
LYD2_k127_1276396_55 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000002077 142.0
LYD2_k127_1276396_56 Belongs to the P-Pant transferase superfamily - - - 0.00000000000000000000000000000000002477 142.0
LYD2_k127_1276396_57 COG NOG19114 non supervised orthologous group - - - 0.00000000000000000000000000000000009428 135.0
LYD2_k127_1276396_58 Domain of unknown function (DUF4870) K09940 - - 0.000000000000000000000000004741 114.0
LYD2_k127_1276396_6 SecY translocase K03076 - - 9.867e-200 630.0
LYD2_k127_1276396_60 Ribosomal protein L30 K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000131 86.0
LYD2_k127_1276396_61 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000009904 81.0
LYD2_k127_1276396_63 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000961 71.0
LYD2_k127_1276396_64 - - - - 0.000001943 49.0
LYD2_k127_1276396_7 S1 RNA binding domain protein K08301 - - 1.725e-199 633.0
LYD2_k127_1276396_8 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 612.0
LYD2_k127_1276396_9 H gluconate symporter and related K06155 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 565.0
LYD2_k127_1293243_0 PFAM ASPIC and UnbV - - - 6.132e-272 873.0
LYD2_k127_1293243_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 418.0
LYD2_k127_1293243_2 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000001577 181.0
LYD2_k127_1293879_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1325.0
LYD2_k127_1293879_1 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 573.0
LYD2_k127_1293879_10 YigZ family - - - 0.0000000000000000000000000000000000000000000000000000000000001719 217.0
LYD2_k127_1293879_11 Chaperonin 10 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000002642 190.0
LYD2_k127_1293879_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000008235 122.0
LYD2_k127_1293879_13 Domain of unknown function (DUF4293) - - - 0.00000000001656 70.0
LYD2_k127_1293879_14 Vi polysaccharide biosynthesis protein VipB TviC K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000003843 63.0
LYD2_k127_1293879_15 chaperone-mediated protein folding - - - 0.0001025 53.0
LYD2_k127_1293879_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 527.0
LYD2_k127_1293879_3 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 486.0
LYD2_k127_1293879_4 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 400.0
LYD2_k127_1293879_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 380.0
LYD2_k127_1293879_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 361.0
LYD2_k127_1293879_7 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 306.0
LYD2_k127_1293879_8 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006357 274.0
LYD2_k127_1293879_9 Aspartate carbamoyltransferase regulatory chain, metal binding domain K00610 - - 0.000000000000000000000000000000000000000000000000000000000000001495 222.0
LYD2_k127_1305985_0 cellulase activity K20276 - - 0.00000000000000000000000000000000000000004692 171.0
LYD2_k127_1305985_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000004114 130.0
LYD2_k127_1305985_3 Protein of unknown function (DUF1566) - - - 0.0000000000000000000027 109.0
LYD2_k127_1306969_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 400.0
LYD2_k127_1306969_1 Transcription termination factor nusG - - - 0.000000000000000000000000000000000000000009268 159.0
LYD2_k127_1306969_2 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000002814 88.0
LYD2_k127_1313714_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001739 289.0
LYD2_k127_1313714_2 - - - - 0.00000000000000000000711 102.0
LYD2_k127_1313953_0 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000001991 261.0
LYD2_k127_1313953_1 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000003671 208.0
LYD2_k127_1313953_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000789 203.0
LYD2_k127_1313953_3 - - - - 0.000000000000000000000000000000001936 141.0
LYD2_k127_1313953_4 - - - - 0.000000000000003038 87.0
LYD2_k127_1313953_5 protein involved in outer membrane biogenesis K07289 - - 0.0000000000001305 82.0
LYD2_k127_1323587_0 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 354.0
LYD2_k127_1323587_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003985 241.0
LYD2_k127_1323587_2 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000125 192.0
LYD2_k127_1323587_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000009066 190.0
LYD2_k127_1323587_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000002031 69.0
LYD2_k127_1324647_0 Peptidase S46 - - - 3.705e-267 839.0
LYD2_k127_1324647_1 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.0000000000000000000000000000000000000000000000000000000000000000000000000003762 259.0
LYD2_k127_1341976_0 alpha-glucan phosphorylase K00688,K00691,K16153 - 2.4.1.1,2.4.1.11,2.4.1.8 0.0 1554.0
LYD2_k127_1341976_1 formate C-acetyltransferase activity K00656 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.3.1.54 0.0 1158.0
LYD2_k127_1341976_10 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009603 523.0
LYD2_k127_1341976_11 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 379.0
LYD2_k127_1341976_12 glycyl-radical enzyme activating activity K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 301.0
LYD2_k127_1341976_13 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 295.0
LYD2_k127_1341976_14 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005541 276.0
LYD2_k127_1341976_15 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001061 258.0
LYD2_k127_1341976_16 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005323 256.0
LYD2_k127_1341976_17 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000008837 241.0
LYD2_k127_1341976_18 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000006467 238.0
LYD2_k127_1341976_19 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000004277 231.0
LYD2_k127_1341976_2 1,4-alpha-glucan branching enzyme K00700 - 2.4.1.18 3.357e-269 843.0
LYD2_k127_1341976_20 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000522 226.0
LYD2_k127_1341976_21 Transcription elongation factor, N-terminal K03624 - - 0.000000000000000000000000000000000000000000000000000000000008545 210.0
LYD2_k127_1341976_22 HIT family hydrolase K02503 - - 0.0000000000000000000000000000000000000000000000000000000007239 203.0
LYD2_k127_1341976_23 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000003655 184.0
LYD2_k127_1341976_24 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000001213 170.0
LYD2_k127_1341976_25 - - - - 0.0000000000000000000000000000000004448 145.0
LYD2_k127_1341976_26 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.000000000000001889 87.0
LYD2_k127_1341976_27 nitrite reductase [NAD(P)H] activity - - - 0.00000000000005273 79.0
LYD2_k127_1341976_3 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 1.437e-267 832.0
LYD2_k127_1341976_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.807e-253 787.0
LYD2_k127_1341976_5 Glycogen debranching enzyme - - - 6.978e-244 769.0
LYD2_k127_1341976_6 magnesium chelatase K07391 - - 3.486e-234 733.0
LYD2_k127_1341976_7 TrkA-C domain K11105 - - 1.114e-203 644.0
LYD2_k127_1341976_8 Starch synthase catalytic domain - - - 2.437e-199 628.0
LYD2_k127_1341976_9 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 612.0
LYD2_k127_134280_0 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.0 1189.0
LYD2_k127_134280_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 2.47e-228 724.0
LYD2_k127_134280_10 CoA-binding domain K13012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 340.0
LYD2_k127_134280_11 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 324.0
LYD2_k127_134280_12 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 330.0
LYD2_k127_134280_13 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 304.0
LYD2_k127_134280_14 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005026 271.0
LYD2_k127_134280_15 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001702 264.0
LYD2_k127_134280_16 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000223 267.0
LYD2_k127_134280_17 FG-GAP repeat protein K01179,K01728,K03932 - 3.2.1.4,4.2.2.2 0.00000000000000000000000000000000000000000000000000000000000000000002438 249.0
LYD2_k127_134280_18 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000003569 242.0
LYD2_k127_134280_19 Right handed beta helix region - - - 0.0000000000000000000000000000000000000000000000000000000000000000006952 259.0
LYD2_k127_134280_2 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 589.0
LYD2_k127_134280_21 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000003574 213.0
LYD2_k127_134280_22 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000004034 204.0
LYD2_k127_134280_23 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000401 222.0
LYD2_k127_134280_24 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000002498 203.0
LYD2_k127_134280_25 Lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000001047 192.0
LYD2_k127_134280_26 - - - - 0.00000000000000000000000000000000000000000000000006817 182.0
LYD2_k127_134280_27 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000008811 174.0
LYD2_k127_134280_28 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000002419 180.0
LYD2_k127_134280_29 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000225 154.0
LYD2_k127_134280_3 amp-binding K01897,K18660 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 558.0
LYD2_k127_134280_30 YoeB-like toxin of bacterial type II toxin-antitoxin system K19158 - - 0.00000000000000000000000000000000008283 134.0
LYD2_k127_134280_31 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K17810 - 6.3.1.12 0.0000000000000000000000000000000003953 143.0
LYD2_k127_134280_32 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000001924 136.0
LYD2_k127_134280_33 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000006912 124.0
LYD2_k127_134280_34 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000002296 113.0
LYD2_k127_134280_35 Phosphopantetheine attachment site - - - 0.000000000000000000002991 95.0
LYD2_k127_134280_36 chlorophyll binding - - - 0.000000000000000001363 102.0
LYD2_k127_134280_37 Antitoxin component of a toxin-antitoxin (TA) module K19159 - - 0.000000000000000004824 86.0
LYD2_k127_134280_38 C-terminal domain of CHU protein family - - - 0.000000000000003422 90.0
LYD2_k127_134280_39 Chondroitinase B - - - 0.0000000000001026 86.0
LYD2_k127_134280_4 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 536.0
LYD2_k127_134280_40 Xylose isomerase domain protein TIM barrel - - - 0.000000002081 59.0
LYD2_k127_134280_41 - - - - 0.000000653 53.0
LYD2_k127_134280_5 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 513.0
LYD2_k127_134280_6 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 486.0
LYD2_k127_134280_7 Carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 509.0
LYD2_k127_134280_8 NAD synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 426.0
LYD2_k127_134280_9 TIGRFAM capsular exopolysaccharide family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 412.0
LYD2_k127_136302_0 Bacterial DNA topoisomeraes I ATP-binding domain K03168 - 5.99.1.2 8.13e-295 923.0
LYD2_k127_136302_1 SIS domain K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 7.398e-266 830.0
LYD2_k127_136302_10 Arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001265 273.0
LYD2_k127_136302_11 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.000000000000000000000000000000000000000000000000000000000000163 224.0
LYD2_k127_136302_12 Gliding motility protein GldL - - - 0.000000000000000000000000000000000000000000000000000000001247 211.0
LYD2_k127_136302_13 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000007531 183.0
LYD2_k127_136302_14 GldM C-terminal domain - - - 0.000000000000000000000004445 106.0
LYD2_k127_136302_2 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 6.977e-265 840.0
LYD2_k127_136302_3 Psort location Cytoplasmic, score 8.96 - - - 2.454e-242 766.0
LYD2_k127_136302_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009943 602.0
LYD2_k127_136302_5 gliding motility-associated lipoprotein GldK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 554.0
LYD2_k127_136302_6 Male sterility protein K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 536.0
LYD2_k127_136302_7 Starch synthase, catalytic domain K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 382.0
LYD2_k127_136302_8 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000139 282.0
LYD2_k127_136302_9 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001429 280.0
LYD2_k127_1373393_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 302.0
LYD2_k127_1373393_1 COGs COG5616 integral membrane protein - - - 0.000000000000000000445 100.0
LYD2_k127_1373393_2 - - - - 0.0000008475 53.0
LYD2_k127_1373393_3 - - - - 0.00003617 53.0
LYD2_k127_1377291_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 580.0
LYD2_k127_1377291_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 381.0
LYD2_k127_138123_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1300.0
LYD2_k127_138123_1 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 368.0
LYD2_k127_138123_2 - - - - 0.0000000000000000000000000003061 117.0
LYD2_k127_138123_3 TIGRFAM efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139,K18300 - - 0.00000000000000000001075 96.0
LYD2_k127_1407431_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000004954 199.0
LYD2_k127_1407431_1 TIR domain - - - 0.00007058 50.0
LYD2_k127_1409615_0 Dehydrogenase E1 component K00615 - 2.2.1.1 1.449e-306 956.0
LYD2_k127_1409615_1 Domain of unknown function (DUF5103) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 362.0
LYD2_k127_1409615_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 308.0
LYD2_k127_1409615_3 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000001783 201.0
LYD2_k127_1409615_4 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000004914 189.0
LYD2_k127_1416473_0 Beta galactosidase small chain K01190 - 3.2.1.23 0.0 1123.0
LYD2_k127_1416473_1 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 1.623e-235 741.0
LYD2_k127_1416473_2 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 442.0
LYD2_k127_1416473_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 352.0
LYD2_k127_1416473_4 Domain of unknown function K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 300.0
LYD2_k127_1416473_5 Outer membrane protein beta-barrel domain - - - 0.00000000000000001978 90.0
LYD2_k127_1416473_6 Putative zincin peptidase - - - 0.0000000000000004667 86.0
LYD2_k127_1416473_7 cAMP biosynthetic process - - - 0.00000000001986 69.0
LYD2_k127_1417367_0 Domain of unknown function K03737 - 1.2.7.1 0.0 1824.0
LYD2_k127_1417367_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.633e-220 698.0
LYD2_k127_1417367_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 409.0
LYD2_k127_1417367_3 Acyl-CoA reductase (LuxC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005304 345.0
LYD2_k127_1417367_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 329.0
LYD2_k127_1417367_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 290.0
LYD2_k127_1417367_6 Plasmid pRiA4b ORF-3-like protein - - - 0.0000000000000000000000005288 111.0
LYD2_k127_1417367_7 23S rRNA-intervening sequence protein - - - 0.000000000000000000000019 103.0
LYD2_k127_1423554_1 Ferric reductase like transmembrane component - - - 0.0000000000000000000000000003222 123.0
LYD2_k127_1423554_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000008733 111.0
LYD2_k127_1423554_3 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.00000000003777 68.0
LYD2_k127_1423554_4 Protein of unknown function (DUF1761) - - - 0.00001479 50.0
LYD2_k127_1427320_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000007169 254.0
LYD2_k127_1428207_0 Belongs to the glycosyl hydrolase 2 family K15855 - 3.2.1.165 1.332e-235 756.0
LYD2_k127_1428207_1 carboxylic acid catabolic process K01187 - 3.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 552.0
LYD2_k127_1428207_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01776,K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20,5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 527.0
LYD2_k127_1428207_3 Transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 434.0
LYD2_k127_1428207_4 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 401.0
LYD2_k127_1428207_5 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 295.0
LYD2_k127_1428207_6 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000001278 72.0
LYD2_k127_1434258_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 1.843e-207 651.0
LYD2_k127_1434258_1 Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 529.0
LYD2_k127_1434258_10 domain protein K07154 - 2.7.11.1 0.0000000000000000000000000000000000000005243 150.0
LYD2_k127_1434258_11 Domain of unknown function (DUF1987) - - - 0.00000000000000000000001878 106.0
LYD2_k127_1434258_12 endonuclease containing a URI domain K07461 - - 0.00000000000000000000002607 102.0
LYD2_k127_1434258_14 transcriptional regulator, y4mF family - - - 0.00000000000000000000127 96.0
LYD2_k127_1434258_15 Tetratricopeptide repeat - - - 0.000000000000002414 87.0
LYD2_k127_1434258_16 - - - - 0.00000000004904 66.0
LYD2_k127_1434258_2 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 432.0
LYD2_k127_1434258_3 Pfam:HipA_N K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 426.0
LYD2_k127_1434258_4 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 348.0
LYD2_k127_1434258_5 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 324.0
LYD2_k127_1434258_6 Elongation factor P (EF-P) OB domain K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001935 265.0
LYD2_k127_1434258_7 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004282 252.0
LYD2_k127_1434258_8 Universal bacterial protein YeaZ K14742 - - 0.000000000000000000000000000000000000000000000000000000000005984 214.0
LYD2_k127_1434258_9 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000001103 156.0
LYD2_k127_1438448_0 Oxidoreductase domain protein - - - 5.805e-220 690.0
LYD2_k127_1438448_1 Alpha-L-fucosidase K01206 - 3.2.1.51 2.602e-197 623.0
LYD2_k127_1438448_2 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 431.0
LYD2_k127_1438448_3 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 426.0
LYD2_k127_1438448_4 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001822 265.0
LYD2_k127_1438448_5 - - - - 0.00000000000000000000000597 109.0
LYD2_k127_1445265_0 - - - - 1.534e-202 637.0
LYD2_k127_1445265_1 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 382.0
LYD2_k127_1445265_2 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005169 297.0
LYD2_k127_1445265_3 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000001639 58.0
LYD2_k127_1446722_0 Beta-lactamase class C - - - 1.209e-211 675.0
LYD2_k127_1446722_1 transcriptional regulator (AraC family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006887 269.0
LYD2_k127_1446722_2 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000003155 205.0
LYD2_k127_1446722_3 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000000000000001467 191.0
LYD2_k127_1446722_4 Tetratricopeptide repeat - - - 0.0000000000000000000001825 113.0
LYD2_k127_1446722_5 AAA-like domain - - - 0.000000000000001079 91.0
LYD2_k127_1446722_6 DNA repair protein K03630 - - 0.000000004814 60.0
LYD2_k127_1453537_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 512.0
LYD2_k127_1453537_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 345.0
LYD2_k127_1453537_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004425 287.0
LYD2_k127_1453537_3 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000003874 185.0
LYD2_k127_1453537_4 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00000000000000000000000000000000000000000000001862 181.0
LYD2_k127_1453537_5 Uncharacterized ACR, COG1399 - - - 0.00000000000000000000000000000000000002074 150.0
LYD2_k127_1453537_6 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000004786 135.0
LYD2_k127_1453537_7 Ribosomal L32p protein family K02911 - - 0.00000000000000000000000002345 108.0
LYD2_k127_1453537_9 membrane protein (DUF2154) - - - 0.0004719 48.0
LYD2_k127_1463310_0 peptidyl-tyrosine sulfation - - - 4.247e-272 878.0
LYD2_k127_1463310_1 Receptor family ligand binding region - - - 0.000000000000000000000000003796 124.0
LYD2_k127_149461_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.051e-206 655.0
LYD2_k127_149461_1 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 575.0
LYD2_k127_149461_2 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 565.0
LYD2_k127_149461_3 COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1 K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 290.0
LYD2_k127_149461_4 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002381 277.0
LYD2_k127_149461_5 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000144 153.0
LYD2_k127_149461_6 hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000001854 152.0
LYD2_k127_149461_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000001713 70.0
LYD2_k127_1501894_0 serine-type peptidase activity K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 406.0
LYD2_k127_1501894_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 283.0
LYD2_k127_1501894_2 His Kinase A (phosphoacceptor) domain K02484,K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000002028 271.0
LYD2_k127_1517845_0 Major Facilitator Superfamily K02429 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 489.0
LYD2_k127_1517845_1 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 340.0
LYD2_k127_1517845_2 Oxidoreductase NAD-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 313.0
LYD2_k127_1517845_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003932 289.0
LYD2_k127_1517845_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002647 272.0
LYD2_k127_1517845_5 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000819 264.0
LYD2_k127_1517845_6 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000005934 204.0
LYD2_k127_1517845_7 PspC domain protein K03973 - - 0.00000000000000000000000000000000000000000000000000114 203.0
LYD2_k127_1517845_8 PspC domain K03973 - - 0.00000000000000000000000000000000000000000000002596 176.0
LYD2_k127_1517845_9 Transcriptional regulator PadR-like family K10947 - - 0.0000000000000000000000000000000000000000000002568 169.0
LYD2_k127_1531732_0 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 326.0
LYD2_k127_1531732_1 Psort location Cytoplasmic, score 8.96 K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000006986 255.0
LYD2_k127_1531732_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000339 143.0
LYD2_k127_1531732_3 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000004636 112.0
LYD2_k127_1531732_4 Peptidyl-prolyl cis-trans isomerase K01802,K03767 - 5.2.1.8 0.0000000000001473 77.0
LYD2_k127_1531732_5 Sulfatase-modifying factor enzyme 1 - - - 0.0000001392 59.0
LYD2_k127_1531732_6 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00002975 49.0
LYD2_k127_1542615_0 polygalacturonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008104 280.0
LYD2_k127_1542615_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000001198 201.0
LYD2_k127_1542615_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000002244 166.0
LYD2_k127_1542615_3 PFAM FecR protein - - - 0.00000000000000000000000000005347 135.0
LYD2_k127_1560017_0 ATP-grasp domain K09181 - - 1.485e-290 906.0
LYD2_k127_1560017_1 In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS K03150 - 4.1.99.19 3.22e-207 653.0
LYD2_k127_1560017_2 Iron-only hydrogenase maturation rSAM protein HydE K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 491.0
LYD2_k127_1560017_3 protein histidine kinase activity K02484,K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 341.0
LYD2_k127_1560017_4 ATPase domain predominantly from Archaea - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 291.0
LYD2_k127_1560017_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000000000146 229.0
LYD2_k127_1560017_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000003806 208.0
LYD2_k127_1560017_7 ACT domain protein - - - 0.00000000000000000000000000000000000000001103 157.0
LYD2_k127_1560017_8 - - - - 0.0000006183 58.0
LYD2_k127_1560017_9 - - - - 0.000007085 55.0
LYD2_k127_1561632_0 Peptidase, M28 - - - 2.092e-225 711.0
LYD2_k127_1561632_1 IPT/TIG domain - - - 0.000000000000000000000000000000000000000000000000000000000000000149 233.0
LYD2_k127_1561632_2 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000000006033 178.0
LYD2_k127_1561632_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000005982 156.0
LYD2_k127_1561632_4 Outer membrane protein beta-barrel domain - - - 0.00000001028 64.0
LYD2_k127_1561632_5 Carboxypeptidase regulatory-like domain K01292,K01294,K07752 GO:0001505,GO:0001956,GO:0003007,GO:0003205,GO:0003206,GO:0003208,GO:0003214,GO:0003231,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0004185,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005886,GO:0006464,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0007186,GO:0007218,GO:0007267,GO:0007268,GO:0007269,GO:0007271,GO:0007275,GO:0007507,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0008582,GO:0009056,GO:0009653,GO:0009887,GO:0009914,GO:0009987,GO:0010033,GO:0010035,GO:0010037,GO:0010467,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0012506,GO:0014055,GO:0014056,GO:0014057,GO:0015695,GO:0015696,GO:0015870,GO:0015893,GO:0016020,GO:0016055,GO:0016485,GO:0016486,GO:0016787,GO:0017171,GO:0019538,GO:0019904,GO:0022603,GO:0023051,GO:0023052,GO:0023056,GO:0023061,GO:0030070,GO:0030141,GO:0030424,GO:0030425,GO:0030536,GO:0030537,GO:0030659,GO:0030667,GO:0031045,GO:0031090,GO:0031410,GO:0031982,GO:0032222,GO:0032224,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033036,GO:0034230,GO:0034613,GO:0034641,GO:0035690,GO:0036211,GO:0036477,GO:0040008,GO:0040012,GO:0040017,GO:0042043,GO:0042221,GO:0042445,GO:0042493,GO:0042995,GO:0043005,GO:0043025,GO:0043051,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043204,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043412,GO:0043603,GO:0044057,GO:0044058,GO:0044062,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045121,GO:0045202,GO:0045887,GO:0045927,GO:0046872,GO:0046879,GO:0046883,GO:0046887,GO:0046903,GO:0046914,GO:0046928,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048521,GO:0048522,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050804,GO:0050806,GO:0050807,GO:0050839,GO:0050896,GO:0050897,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051588,GO:0051590,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0051952,GO:0051954,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051965,GO:0060259,GO:0060341,GO:0060456,GO:0060688,GO:0061526,GO:0061837,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070727,GO:0070887,GO:0071241,GO:0071244,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072347,GO:0072359,GO:0072657,GO:0090257,GO:0090325,GO:0090326,GO:0097060,GO:0097447,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098805,GO:0098857,GO:0098916,GO:0099177,GO:0099503,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140096,GO:0198738,GO:1901142,GO:1901374,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1903530,GO:1903532,GO:1903745,GO:1903998,GO:1903999,GO:1904396,GO:1904398,GO:1905114,GO:2000026,GO:2000172,GO:2000173,GO:2000252,GO:2000292,GO:2000294,GO:2001023,GO:2001025 3.4.17.10,3.4.17.22,3.4.17.3 0.0001273 54.0
LYD2_k127_1563070_0 glucosamine-6-phosphate deaminase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 511.0
LYD2_k127_1563070_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001764 237.0
LYD2_k127_1563070_2 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003783 238.0
LYD2_k127_1563070_3 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000002485 223.0
LYD2_k127_1563070_4 inositol monophosphate 1-phosphatase activity K01082,K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000000000003184 165.0
LYD2_k127_1563070_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00847,K00852,K18478 - 2.7.1.15,2.7.1.184,2.7.1.4 0.0000000004938 63.0
LYD2_k127_1581809_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.327e-225 704.0
LYD2_k127_1581809_1 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 467.0
LYD2_k127_1581809_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 363.0
LYD2_k127_1586509_0 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 481.0
LYD2_k127_1586509_1 Domain of unknown function (DUF5060) - - - 0.0000000000000000000000000000000000000000000000000009315 203.0
LYD2_k127_1586509_2 Psort location Cytoplasmic, score K00008 - 1.1.1.14 0.000000002863 58.0
LYD2_k127_1589015_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000183 201.0
LYD2_k127_1589015_1 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000007956 194.0
LYD2_k127_1589015_2 domain, Protein K20276,K21449 - - 0.00000000000000000000001327 106.0
LYD2_k127_1601129_0 PFAM TonB-dependent Receptor Plug - - - 0.0 1138.0
LYD2_k127_1601129_1 PFAM ASPIC and UnbV - - - 1.413e-279 885.0
LYD2_k127_1601129_2 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 582.0
LYD2_k127_1677810_0 ABC-2 type transporter - - - 8.087e-252 805.0
LYD2_k127_1677810_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000004311 241.0
LYD2_k127_1677810_2 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000004007 220.0
LYD2_k127_1677810_3 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000000000000000000000002133 193.0
LYD2_k127_1677810_4 - - - - 0.0000000000000000000000000000000000000000002306 164.0
LYD2_k127_1677810_5 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000002918 147.0
LYD2_k127_1698276_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 1.874e-293 914.0
LYD2_k127_1698276_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 565.0
LYD2_k127_1698276_2 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 549.0
LYD2_k127_1698276_3 succinate dehydrogenase K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 370.0
LYD2_k127_1698276_4 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000006335 236.0
LYD2_k127_1698276_5 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000004274 199.0
LYD2_k127_1698276_6 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000006018 205.0
LYD2_k127_1698276_7 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.0000000000000000000000000000000000000000000000001279 184.0
LYD2_k127_1698276_8 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000001583 106.0
LYD2_k127_1698276_9 Major facilitator superfamily - - - 0.000000000000000004009 84.0
LYD2_k127_1722673_0 PFAM Bacterial alpha-L-rhamnosidase K05989 - 3.2.1.40 0.0 1033.0
LYD2_k127_1722673_1 lysine 2,3-aminomutase activity K01843,K19810 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 339.0
LYD2_k127_1722673_2 RF-1 domain K15034 - - 0.000000000000000000000001652 109.0
LYD2_k127_1741954_0 serine-type peptidase activity K03641 - - 0.000000000000000000000000000000000000000000000000000000000006795 225.0
LYD2_k127_1741954_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000002022 211.0
LYD2_k127_1741954_2 His Kinase A (phosphoacceptor) domain K02484,K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000006392 167.0
LYD2_k127_1784443_0 Aminotransferase class I and II K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 606.0
LYD2_k127_1784443_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 488.0
LYD2_k127_1784443_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000156 162.0
LYD2_k127_1784443_3 Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000004138 153.0
LYD2_k127_1784443_4 PFAM cytoplasmic chaperone TorD family protein - - - 0.00000000003347 72.0
LYD2_k127_1812520_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1262.0
LYD2_k127_1812520_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.172e-241 751.0
LYD2_k127_1812520_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 592.0
LYD2_k127_1812520_3 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 402.0
LYD2_k127_1812520_4 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 385.0
LYD2_k127_1812520_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 302.0
LYD2_k127_1812520_6 Formyl transferase K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000162 246.0
LYD2_k127_1812520_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000001221 209.0
LYD2_k127_1812520_8 Phosphopantetheine attachment site K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000004911 137.0
LYD2_k127_1812520_9 - - - - 0.000000002064 64.0
LYD2_k127_18493_0 ABC transporter, ATP-binding protein K06147 - - 3.666e-272 855.0
LYD2_k127_18493_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.627e-257 802.0
LYD2_k127_18493_10 ABC transporter, ATP-binding protein K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007328 288.0
LYD2_k127_18493_11 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006793 274.0
LYD2_k127_18493_12 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005313 253.0
LYD2_k127_18493_13 Sigma-70 region 2 - - - 0.000000000000000000000000000004134 126.0
LYD2_k127_18493_14 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000133 79.0
LYD2_k127_18493_2 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 622.0
LYD2_k127_18493_3 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 596.0
LYD2_k127_18493_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 529.0
LYD2_k127_18493_5 Domain of unknown function (DUF4369) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 400.0
LYD2_k127_18493_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 368.0
LYD2_k127_18493_7 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 319.0
LYD2_k127_18493_8 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 326.0
LYD2_k127_18493_9 HlyD family secretion protein K02022 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 297.0
LYD2_k127_1849514_0 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 406.0
LYD2_k127_1849514_1 Hydrolase of X-linked nucleoside diphosphate N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002034 259.0
LYD2_k127_1849514_2 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000001482 257.0
LYD2_k127_1849514_3 Pfam Phosphate-selective porin O and P - - - 0.0000000000000000000000001022 110.0
LYD2_k127_1849514_4 DsrE/DsrF-like family K04085 - - 0.0000001466 53.0
LYD2_k127_190098_0 S4 RNA-binding domain K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 497.0
LYD2_k127_190098_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 447.0
LYD2_k127_190098_10 Glycosyl transferase family 2 - - - 0.0000000000000000000000004383 110.0
LYD2_k127_190098_11 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000001641 79.0
LYD2_k127_190098_2 rRNA small subunit methyltransferase G K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000006414 252.0
LYD2_k127_190098_3 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003468 246.0
LYD2_k127_190098_4 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006508 241.0
LYD2_k127_190098_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000005374 239.0
LYD2_k127_190098_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001082 247.0
LYD2_k127_190098_7 PASTA K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000001533 219.0
LYD2_k127_190098_8 Transposase K07491 - - 0.0000000000000000000000000000000000000000000000000006602 187.0
LYD2_k127_190098_9 TPM domain - - - 0.00000000000000000000000000000000000000000000000007832 181.0
LYD2_k127_190422_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.817e-284 884.0
LYD2_k127_190422_1 Acetolactate synthase, large subunit K01652 - 2.2.1.6 1.861e-229 724.0
LYD2_k127_190422_2 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 490.0
LYD2_k127_190422_3 Cytidylyltransferase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 394.0
LYD2_k127_190422_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 381.0
LYD2_k127_190422_5 COG COG1082 Sugar phosphate isomerases epimerases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 377.0
LYD2_k127_190422_6 Alpha mannosidase, middle domain K01191 - 3.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 354.0
LYD2_k127_190422_7 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000003713 116.0
LYD2_k127_190422_8 Glycosyl hydrolase 38 domain protein K01191 - 3.2.1.24 0.00000000000000000000000002619 115.0
LYD2_k127_1927316_0 Alpha-L-rhamnosidase N-terminal domain protein K05989 - 3.2.1.40 0.0 1234.0
LYD2_k127_1927316_1 Polyphosphate kinase middle domain K00937 - 2.7.4.1 9.611e-227 721.0
LYD2_k127_1927316_10 phosphohistidine phosphatase K08296 - - 0.0000000000000000000004853 102.0
LYD2_k127_1927316_11 - - - - 0.000003608 58.0
LYD2_k127_1927316_12 CHAD - - - 0.00001537 56.0
LYD2_k127_1927316_13 - - - - 0.0004055 49.0
LYD2_k127_1927316_2 pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 556.0
LYD2_k127_1927316_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 460.0
LYD2_k127_1927316_4 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 330.0
LYD2_k127_1927316_5 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000231 239.0
LYD2_k127_1927316_6 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000006507 238.0
LYD2_k127_1927316_7 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000892 149.0
LYD2_k127_1927316_8 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000008089 142.0
LYD2_k127_1927316_9 DsrC like protein K11179 - - 0.000000000000000000000000000000000009934 138.0
LYD2_k127_1928935_0 Psort location Cytoplasmic, score K07137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 616.0
LYD2_k127_1928935_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 556.0
LYD2_k127_1928935_10 COG NOG25147 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000008528 220.0
LYD2_k127_1928935_11 RNA methyltransferase TrmH K03437 - - 0.000000000000000000000000000000000000000000000000007211 184.0
LYD2_k127_1928935_12 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000002466 187.0
LYD2_k127_1928935_13 PFAM Penicillinase repressor - - - 0.000000000000000000000000000000000000000000007733 166.0
LYD2_k127_1928935_14 - - - - 0.000000000000000000000000000003494 130.0
LYD2_k127_1928935_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 541.0
LYD2_k127_1928935_3 AP endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 524.0
LYD2_k127_1928935_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 467.0
LYD2_k127_1928935_5 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 449.0
LYD2_k127_1928935_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 404.0
LYD2_k127_1928935_7 Nitroreductase family K19285,K19286 - 1.5.1.38,1.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 359.0
LYD2_k127_1928935_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 334.0
LYD2_k127_1928935_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000001208 239.0
LYD2_k127_1935312_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1229.0
LYD2_k127_1935312_1 Belongs to the phosphoenolpyruvate carboxykinase (ATP) family K01610 GO:0000287,GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 4.1.1.49 4.528e-236 740.0
LYD2_k127_1935312_2 Tyrosine recombinase XerC K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 366.0
LYD2_k127_1935312_3 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 351.0
LYD2_k127_1935312_4 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003327 242.0
LYD2_k127_1935312_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000007383 216.0
LYD2_k127_1935312_6 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - 0.0000000000000000000000000000000000000000007412 158.0
LYD2_k127_1935312_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00001506 47.0
LYD2_k127_1958798_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 6.859e-222 699.0
LYD2_k127_1958798_1 Glutamine amidotransferase domain K00764 - 2.4.2.14 1.795e-211 665.0
LYD2_k127_1958798_10 Phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000001865 236.0
LYD2_k127_1958798_11 nucleotide phosphatase activity, acting on free nucleotides K00943,K02013,K02017,K03574,K03752,K06928 - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 0.000000000000000000000000000000000000000000000000000000000005889 228.0
LYD2_k127_1958798_12 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000155 199.0
LYD2_k127_1958798_13 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000002796 185.0
LYD2_k127_1958798_14 Transcriptional regulator - - - 0.00000000000000000000000000000000000007517 146.0
LYD2_k127_1958798_15 Putative heavy-metal chelation - - - 0.000000000000000000000000000000000006444 147.0
LYD2_k127_1958798_16 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000003703 122.0
LYD2_k127_1958798_17 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000001262 111.0
LYD2_k127_1958798_18 YCII-related domain K09780 - - 0.00000000000000000000000002271 111.0
LYD2_k127_1958798_19 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000001114 70.0
LYD2_k127_1958798_2 Natural resistance-associated macrophage protein K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 559.0
LYD2_k127_1958798_3 Tat pathway signal sequence domain protein K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 515.0
LYD2_k127_1958798_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 424.0
LYD2_k127_1958798_5 Streptomycin adenylyltransferase K05593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 422.0
LYD2_k127_1958798_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 404.0
LYD2_k127_1958798_7 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 373.0
LYD2_k127_1958798_8 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 348.0
LYD2_k127_1958798_9 creatininase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 321.0
LYD2_k127_1976678_0 PFAM Tetratricopeptide - - - 0.0 1296.0
LYD2_k127_1976678_1 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 599.0
LYD2_k127_1976678_2 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 580.0
LYD2_k127_1976678_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000005325 231.0
LYD2_k127_2008226_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 493.0
LYD2_k127_2008226_1 AcrB/AcrD/AcrF family K07787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 359.0
LYD2_k127_2008226_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000009582 111.0
LYD2_k127_2057013_0 ATPase domain predominantly from Archaea - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 342.0
LYD2_k127_2057013_1 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001675 264.0
LYD2_k127_207204_0 Glycosyl hydrolases family 2, sugar binding domain - - - 3.14e-265 835.0
LYD2_k127_207204_1 Major facilitator Superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000005712 86.0
LYD2_k127_2093533_0 serine-type aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000005867 228.0
LYD2_k127_2093533_1 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.00000000000000000000000000000000000000000000000002334 193.0
LYD2_k127_20977_0 Domain of unknown function (DUF5107) - - - 8.504e-253 817.0
LYD2_k127_20977_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004444 558.0
LYD2_k127_20977_2 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 410.0
LYD2_k127_20977_3 - - - - 0.0000000000000000000000000000000000001379 149.0
LYD2_k127_2164259_0 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 6.933e-198 625.0
LYD2_k127_2164259_1 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 460.0
LYD2_k127_2164259_2 permease K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 390.0
LYD2_k127_2164259_3 permease K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 383.0
LYD2_k127_2164259_4 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001768 280.0
LYD2_k127_2164259_5 Efflux ABC transporter, permease protein K09808 - - 0.0000000000001883 74.0
LYD2_k127_2164259_6 HNH endonuclease - - - 0.0000000000003223 70.0
LYD2_k127_2173212_0 HlyD membrane-fusion protein of T1SS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 306.0
LYD2_k127_2173212_1 DoxX K15977 - - 0.000000000000000000000000000000000000000003701 157.0
LYD2_k127_2173212_2 Bacterial virulence protein (VirJ) - - - 0.000000000000000000000000002688 115.0
LYD2_k127_2173212_4 Bacterial virulence protein (VirJ) - - - 0.00000000001001 66.0
LYD2_k127_2218046_0 Valyl tRNA synthetase tRNA binding arm K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1250.0
LYD2_k127_2218046_1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 608.0
LYD2_k127_2218046_10 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 350.0
LYD2_k127_2218046_11 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 328.0
LYD2_k127_2218046_12 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 344.0
LYD2_k127_2218046_13 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005301 284.0
LYD2_k127_2218046_14 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001832 240.0
LYD2_k127_2218046_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000001826 234.0
LYD2_k127_2218046_16 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000000000000000000000000000001373 207.0
LYD2_k127_2218046_17 Domain of unknown function (DUF4270) - - - 0.000000000000000000000000000000000000000000000000000001348 209.0
LYD2_k127_2218046_18 Psort location OuterMembrane, score - - - 0.0000000000000000000000000000000000000000000000000003851 199.0
LYD2_k127_2218046_19 Predicted SPOUT methyltransferase K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000001967 175.0
LYD2_k127_2218046_2 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 639.0
LYD2_k127_2218046_20 Histidine kinase-like ATPases - - - 0.00000000000000000000000005963 108.0
LYD2_k127_2218046_21 COG NOG32209 non supervised orthologous group - - - 0.0000000000000000000002959 100.0
LYD2_k127_2218046_22 Domain of unknown function (DUF4907) - - - 0.000000000000001567 81.0
LYD2_k127_2218046_23 - - - - 0.000455 49.0
LYD2_k127_2218046_3 Aspartate aminotransferase K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 597.0
LYD2_k127_2218046_4 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 557.0
LYD2_k127_2218046_5 Efflux ABC transporter, permease protein K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 442.0
LYD2_k127_2218046_6 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 436.0
LYD2_k127_2218046_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 407.0
LYD2_k127_2218046_8 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 394.0
LYD2_k127_2218046_9 Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 361.0
LYD2_k127_2249440_0 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 598.0
LYD2_k127_2249440_1 COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 487.0
LYD2_k127_2249440_10 Psort location CytoplasmicMembrane, score 9.82 - - - 0.00000000000000000000000000002383 118.0
LYD2_k127_2249440_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 411.0
LYD2_k127_2249440_3 cell adhesion K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000122 307.0
LYD2_k127_2249440_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009377 282.0
LYD2_k127_2249440_5 FtsX-like permease family K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001621 278.0
LYD2_k127_2249440_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000002607 266.0
LYD2_k127_2249440_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000002113 235.0
LYD2_k127_2249440_8 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000007664 242.0
LYD2_k127_2249440_9 domain, Protein K20276 - - 0.0000000000000000000000000000001349 144.0
LYD2_k127_2299486_0 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 599.0
LYD2_k127_2299486_1 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002989 260.0
LYD2_k127_2299486_2 - - - - 0.00000000000000000000000004624 114.0
LYD2_k127_2328754_0 Domain of unknown function (DUF5009) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009473 407.0
LYD2_k127_2328754_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000008843 157.0
LYD2_k127_2328754_2 - - - - 0.000000000000000000004947 100.0
LYD2_k127_2328754_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000002662 68.0
LYD2_k127_234185_0 TIGRFAM gliding motility-associated lipoprotein GldJ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 524.0
LYD2_k127_234185_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 393.0
LYD2_k127_234185_2 glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 327.0
LYD2_k127_234185_3 Ser Thr phosphatase family protein K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 308.0
LYD2_k127_2354795_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.747e-265 838.0
LYD2_k127_2354795_1 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001215 291.0
LYD2_k127_2354795_2 - - - - 0.0000000005743 66.0
LYD2_k127_2354795_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000001861 58.0
LYD2_k127_2354795_4 Beta-ketoacyl synthase K13613 - - 0.00000003979 64.0
LYD2_k127_2354795_5 D-mannonate dehydratase (UxuA) K01686 - 4.2.1.8 0.0000171 48.0
LYD2_k127_2367435_0 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 493.0
LYD2_k127_2367435_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000002291 220.0
LYD2_k127_2367435_2 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000003892 100.0
LYD2_k127_2414554_0 FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 322.0
LYD2_k127_2414554_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003568 246.0
LYD2_k127_2414554_2 DoxX K15977 - - 0.0000000000000000000000000000000000000000001389 162.0
LYD2_k127_2414554_3 CsbD-like - - - 0.0000000000000000000002098 97.0
LYD2_k127_2414554_4 Methionine biosynthesis protein MetW - - - 0.00000000000000003708 91.0
LYD2_k127_2414554_5 COG NOG30576 non supervised orthologous group - - - 0.0003061 48.0
LYD2_k127_2418273_0 Glycosyl Hydrolase Family 88 K18581 - 3.2.1.180 9.375e-232 722.0
LYD2_k127_2418273_1 polysaccharide deacetylase - - - 3.659e-226 724.0
LYD2_k127_2432955_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 496.0
LYD2_k127_2432955_1 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000006834 265.0
LYD2_k127_2432955_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003435 259.0
LYD2_k127_2432955_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000007903 176.0
LYD2_k127_2432955_4 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000111 146.0
LYD2_k127_2432955_5 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000001303 102.0
LYD2_k127_2445753_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 300.0
LYD2_k127_2445753_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 298.0
LYD2_k127_2445753_2 Domain of Unknown Function (DUF1259) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001077 276.0
LYD2_k127_2445753_3 Haem-binding domain - - - 0.000000000000000000000000000000000000000000000003299 177.0
LYD2_k127_2445753_4 Protein of unknown function (DUF3347) - - - 0.0000000000000000000000000000000000000000000005029 172.0
LYD2_k127_2445753_5 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000001386 106.0
LYD2_k127_2452387_0 ABC transporter K06147 - - 7.479e-250 783.0
LYD2_k127_2452387_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.587e-246 775.0
LYD2_k127_2452387_10 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000563 379.0
LYD2_k127_2452387_11 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 339.0
LYD2_k127_2452387_12 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001383 278.0
LYD2_k127_2452387_13 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001449 275.0
LYD2_k127_2452387_14 Peptidase, M23 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002307 267.0
LYD2_k127_2452387_15 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000002526 226.0
LYD2_k127_2452387_16 IA, variant 3 K07025,K20866 - 3.1.3.10 0.0000000000000000000000000000000000000000000003119 173.0
LYD2_k127_2452387_17 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000005391 126.0
LYD2_k127_2452387_18 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000000000001555 116.0
LYD2_k127_2452387_19 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000007101 95.0
LYD2_k127_2452387_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 5.897e-241 758.0
LYD2_k127_2452387_20 Uncharacterized conserved protein (DUF2196) - - - 0.0000000000000000001204 90.0
LYD2_k127_2452387_21 Domain of unknown function (DUF4292) - - - 0.000034 54.0
LYD2_k127_2452387_3 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 579.0
LYD2_k127_2452387_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 560.0
LYD2_k127_2452387_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 522.0
LYD2_k127_2452387_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 466.0
LYD2_k127_2452387_7 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 415.0
LYD2_k127_2452387_8 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 398.0
LYD2_k127_2452387_9 SMP-30 Gluconolaconase LRE-like K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 369.0
LYD2_k127_245828_0 Phosphoesterase family - - - 0.0 1080.0
LYD2_k127_245828_1 Pfam SNARE associated Golgi protein - - - 1.297e-244 767.0
LYD2_k127_245828_2 penicillin-binding protein K05367 - 2.4.1.129 1.883e-244 777.0
LYD2_k127_245828_3 1-pyrroline-5-carboxylate dehydrogenase K00294 - 1.2.1.88 2.609e-239 750.0
LYD2_k127_245828_4 Alpha-macro-globulin thiol-ester bond-forming region K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 539.0
LYD2_k127_245828_5 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006801 333.0
LYD2_k127_245828_6 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000007296 195.0
LYD2_k127_245828_7 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000114 194.0
LYD2_k127_245828_8 - - - - 0.00000000000000000003281 92.0
LYD2_k127_247525_0 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 366.0
LYD2_k127_247525_1 Serine aminopeptidase, S33 - - - 0.00000000000006797 76.0
LYD2_k127_249756_0 Class II glutamine amidotransferase K00764 - 2.4.2.14 6.718e-260 816.0
LYD2_k127_249756_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 582.0
LYD2_k127_249756_2 Hemolysin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 364.0
LYD2_k127_249756_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 334.0
LYD2_k127_249756_4 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 334.0
LYD2_k127_249756_5 - - - - 0.0000000000000002569 85.0
LYD2_k127_2526225_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 291.0
LYD2_k127_2526225_1 Hep Hag repeat protein K20276 - - 0.0000000000000000000000000000000008689 136.0
LYD2_k127_2526225_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000001213 121.0
LYD2_k127_2526225_3 Tetratricopeptide repeat - - - 0.000000003765 70.0
LYD2_k127_2526225_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000006764 59.0
LYD2_k127_2551612_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 404.0
LYD2_k127_2551612_1 oxidation-reduction process K18239,K18240 GO:0003674,GO:0003824,GO:0016787,GO:0016801,GO:0016803 3.3.2.13,4.1.3.40,4.1.3.45 0.000000000000000000000000000000000000000000000000007435 186.0
LYD2_k127_2551612_2 - - - - 0.0000000000000000000000000000000000000000006324 162.0
LYD2_k127_2551612_3 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000003479 76.0
LYD2_k127_2554022_0 TonB-dependent receptor plug domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 324.0
LYD2_k127_2554022_1 - - - - 0.0000001066 62.0
LYD2_k127_2554022_2 Domain of unknown function (DUF4249) - - - 0.00007671 46.0
LYD2_k127_2564409_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 1.993e-225 704.0
LYD2_k127_2564409_1 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000006712 183.0
LYD2_k127_2564409_2 phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000005226 183.0
LYD2_k127_257994_0 Aminotransferase class-V - - - 4.829e-214 674.0
LYD2_k127_2632007_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 599.0
LYD2_k127_2632007_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 586.0
LYD2_k127_2632007_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 288.0
LYD2_k127_2632007_11 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000004534 256.0
LYD2_k127_2632007_12 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004609 227.0
LYD2_k127_2632007_13 Transcription elongation factor K04760 - - 0.000000000000000000000000000000000000000000000000000000000000004027 220.0
LYD2_k127_2632007_14 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000001133 218.0
LYD2_k127_2632007_15 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000002894 204.0
LYD2_k127_2632007_16 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000006655 186.0
LYD2_k127_2632007_17 - - - - 0.00000000000000000000000000001213 133.0
LYD2_k127_2632007_18 - - - - 0.00000000000000000000000000155 115.0
LYD2_k127_2632007_19 DsrE/DsrF-like family - - - 0.0000000000000000000000008516 110.0
LYD2_k127_2632007_2 Belongs to the DegT DnrJ EryC1 family K19715 - 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 542.0
LYD2_k127_2632007_21 - - - - 0.000000000000005105 81.0
LYD2_k127_2632007_22 PFAM blue (type 1) copper domain protein K00368,K02638 - 1.7.2.1 0.000000000000007875 79.0
LYD2_k127_2632007_23 Nodulation protein S (NodS) - - - 0.00000000005386 65.0
LYD2_k127_2632007_24 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.0000002207 53.0
LYD2_k127_2632007_26 - K03646 - - 0.000003844 56.0
LYD2_k127_2632007_27 Peptidase C39, bacteriocin processing - - - 0.0003357 51.0
LYD2_k127_2632007_3 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 508.0
LYD2_k127_2632007_4 Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 434.0
LYD2_k127_2632007_5 alcohol dehydrogenase K19714 - 1.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 426.0
LYD2_k127_2632007_6 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008336 413.0
LYD2_k127_2632007_7 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 399.0
LYD2_k127_2632007_8 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 356.0
LYD2_k127_2632007_9 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 327.0
LYD2_k127_2637235_0 Domain of unknown function (DUF5107) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 469.0
LYD2_k127_2641151_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 2.898e-262 817.0
LYD2_k127_2641151_1 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 438.0
LYD2_k127_2641151_10 Quinol cytochrome c oxidoreductase membrane protein - - - 0.00000000000000000000000000000000000001437 150.0
LYD2_k127_2641151_11 - - - - 0.0000000000000000000000002319 109.0
LYD2_k127_2641151_12 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000001451 74.0
LYD2_k127_2641151_2 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 438.0
LYD2_k127_2641151_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 350.0
LYD2_k127_2641151_4 Pfam Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 334.0
LYD2_k127_2641151_5 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000778 261.0
LYD2_k127_2641151_6 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000004357 225.0
LYD2_k127_2641151_7 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000001123 212.0
LYD2_k127_2641151_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000001355 205.0
LYD2_k127_2641151_9 Cytochrome C - - - 0.000000000000000000000000000000000000000000000001805 180.0
LYD2_k127_267545_0 Alpha galactosidase A K07407 - 3.2.1.22 3.663e-199 627.0
LYD2_k127_267545_1 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002283 300.0
LYD2_k127_267545_2 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000000000000001436 143.0
LYD2_k127_267545_3 Domain of unknown function (DUF5009) - - - 0.0000000001827 63.0
LYD2_k127_267545_4 GlcNAc-PI de-N-acetylase K01463 - - 0.00004051 55.0
LYD2_k127_2711510_0 Belongs to the helicase family. UvrD subfamily - - - 3.949e-218 713.0
LYD2_k127_2711510_1 PD-(D/E)XK nuclease superfamily - - - 3.89e-197 648.0
LYD2_k127_2711510_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 410.0
LYD2_k127_2711510_4 Radical_SAM C-terminal domain K07139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 379.0
LYD2_k127_2711510_5 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003476 232.0
LYD2_k127_2711510_6 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000001431 224.0
LYD2_k127_2711510_7 domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000006646 183.0
LYD2_k127_2711510_8 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000009812 178.0
LYD2_k127_2711510_9 Protein of unknown function (DUF721) - - - 0.000000000000001192 80.0
LYD2_k127_2730523_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1648.0
LYD2_k127_2730523_1 RQC K03654 - 3.6.4.12 0.0 1089.0
LYD2_k127_2730523_10 ABC transporter, ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 377.0
LYD2_k127_2730523_11 Clp protease K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 350.0
LYD2_k127_2730523_12 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 345.0
LYD2_k127_2730523_13 carboxylic acid catabolic process K01187 - 3.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 323.0
LYD2_k127_2730523_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 302.0
LYD2_k127_2730523_15 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000009056 229.0
LYD2_k127_2730523_16 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000001191 220.0
LYD2_k127_2730523_17 - - - - 0.00000000000000000000000000000000000000000000001166 179.0
LYD2_k127_2730523_18 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000025 168.0
LYD2_k127_2730523_19 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000002078 164.0
LYD2_k127_2730523_2 ClpX C4-type zinc finger K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.145e-204 642.0
LYD2_k127_2730523_20 EamA-like transporter family - - - 0.00000000000000000000000000000000000000005728 156.0
LYD2_k127_2730523_21 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000001034 139.0
LYD2_k127_2730523_22 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000014 141.0
LYD2_k127_2730523_23 Carbamoyl-phosphate synthase small chain, CPSase domain K11540 GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002119,GO:0002134,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0022612,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035295,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055086,GO:0055123,GO:0060465,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 0.0000000000000000000000000000003545 127.0
LYD2_k127_2730523_24 Arginine repressor, DNA binding domain K03402 - - 0.0000000000000000000000001017 112.0
LYD2_k127_2730523_3 Seryl-tRNA synthetase N-terminal domain K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008832 594.0
LYD2_k127_2730523_4 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 586.0
LYD2_k127_2730523_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046385,GO:0046483,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 451.0
LYD2_k127_2730523_6 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 452.0
LYD2_k127_2730523_7 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 417.0
LYD2_k127_2730523_8 carboxylic acid catabolic process K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 412.0
LYD2_k127_2730523_9 Trigger factor K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 407.0
LYD2_k127_2756304_0 Oxidoreductase domain protein - - - 1.197e-269 833.0
LYD2_k127_2756304_1 PFAM Major Facilitator Superfamily K08191 - - 2.806e-249 773.0
LYD2_k127_2756304_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002353 276.0
LYD2_k127_2756304_11 DoxX K16937 - 1.8.5.2 0.00000000000000000000000000000000000000000000000001397 184.0
LYD2_k127_2756304_12 Glycosyl Hydrolase Family 88 K18581 - 3.2.1.180 0.0000000000000000000000000005023 113.0
LYD2_k127_2756304_13 amidohydrolase K07045 - - 0.0000000000000000000000002383 117.0
LYD2_k127_2756304_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 6.914e-226 711.0
LYD2_k127_2756304_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 5.277e-221 688.0
LYD2_k127_2756304_4 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 564.0
LYD2_k127_2756304_5 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 474.0
LYD2_k127_2756304_6 Dihydrodipicolinate synthetase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 452.0
LYD2_k127_2756304_7 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 446.0
LYD2_k127_2756304_8 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 414.0
LYD2_k127_2756304_9 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 316.0
LYD2_k127_2778586_0 TIGRFAM FeS assembly protein SufB K09014 - - 1.895e-263 816.0
LYD2_k127_2778586_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 559.0
LYD2_k127_2778586_10 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 353.0
LYD2_k127_2778586_11 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 336.0
LYD2_k127_2778586_12 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 299.0
LYD2_k127_2778586_13 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 289.0
LYD2_k127_2778586_14 Fe-S metabolism K02426 - - 0.000000000000000000000000000000000000000000000000000000003922 202.0
LYD2_k127_2778586_15 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000001052 202.0
LYD2_k127_2778586_16 Inner membrane component domain - - - 0.000000000000000000000000000000000000000000000001164 176.0
LYD2_k127_2778586_17 FeS assembly SUF system protein - - - 0.00000000000000000000000000000000000018 143.0
LYD2_k127_2778586_2 Cys/Met metabolism PLP-dependent enzyme K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 529.0
LYD2_k127_2778586_3 arsenite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 522.0
LYD2_k127_2778586_4 phosphohydrolase K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 471.0
LYD2_k127_2778586_5 FeS assembly protein SufD K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 461.0
LYD2_k127_2778586_6 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 427.0
LYD2_k127_2778586_7 Part of SUF system involved in inserting iron-sulfur clusters into proteins K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 397.0
LYD2_k127_2778586_8 ABC-type multidrug transport system ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 392.0
LYD2_k127_2778586_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 394.0
LYD2_k127_2779411_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 325.0
LYD2_k127_2779411_1 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 306.0
LYD2_k127_2779411_10 Glycosyl hydrolases family 16 - - - 0.0000000004586 69.0
LYD2_k127_2779411_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 316.0
LYD2_k127_2779411_3 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001262 274.0
LYD2_k127_2779411_4 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001923 282.0
LYD2_k127_2779411_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002632 278.0
LYD2_k127_2779411_6 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000003865 225.0
LYD2_k127_2779411_7 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000003372 134.0
LYD2_k127_2779411_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000001354 120.0
LYD2_k127_2779411_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000433 98.0
LYD2_k127_2784156_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 308.0
LYD2_k127_2784156_1 smart pdz dhr glgf - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002021 284.0
LYD2_k127_2784156_2 3'-5' exonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000002863 191.0
LYD2_k127_2784156_3 membrane - - - 0.0000000000000000000000000000000000000000000000007536 176.0
LYD2_k127_2784156_4 acid phosphatase activity K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000001249 168.0
LYD2_k127_2784156_5 - - - - 0.000000000004577 77.0
LYD2_k127_2794760_0 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000001523 160.0
LYD2_k127_2794760_1 SPTR CHU large protein - - - 0.000000000000000000000000000000000000402 151.0
LYD2_k127_2822270_0 GH3 auxin-responsive promoter - - - 3.493e-214 675.0
LYD2_k127_2822270_1 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 480.0
LYD2_k127_2822270_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
LYD2_k127_2822270_3 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 334.0
LYD2_k127_2822270_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 335.0
LYD2_k127_2822270_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000002692 204.0
LYD2_k127_2824702_0 Domain of unknown function (DUF1846) - - - 3.069e-226 710.0
LYD2_k127_2824702_1 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 493.0
LYD2_k127_2824702_2 Phosphorylase superfamily K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 353.0
LYD2_k127_2824702_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 339.0
LYD2_k127_2824702_4 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000009561 218.0
LYD2_k127_2824702_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000003168 179.0
LYD2_k127_2824702_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000002198 162.0
LYD2_k127_2833522_0 ABC-2 type transporter - - - 2.509e-235 763.0
LYD2_k127_2833522_1 PFAM Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 548.0
LYD2_k127_2833522_2 SpoIIE domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 420.0
LYD2_k127_2833522_3 sigma factor antagonist activity K04757 - 2.7.11.1 0.000000000000000000000001072 108.0
LYD2_k127_2833522_4 Belongs to the anti-sigma-factor antagonist family - - - 0.000000000000000001665 89.0
LYD2_k127_2869942_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 6.078e-252 794.0
LYD2_k127_2869942_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.04e-250 794.0
LYD2_k127_2869942_10 HpcH/HpaI aldolase/citrate lyase family K01644,K01646,K18292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008815,GO:0009346,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016833,GO:0032991,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 4.1.3.25,4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 496.0
LYD2_k127_2869942_11 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 492.0
LYD2_k127_2869942_12 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 477.0
LYD2_k127_2869942_13 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 464.0
LYD2_k127_2869942_14 NQR2, RnfD, RnfE family K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009386 445.0
LYD2_k127_2869942_15 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 441.0
LYD2_k127_2869942_16 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 436.0
LYD2_k127_2869942_17 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 413.0
LYD2_k127_2869942_18 Tat pathway signal sequence domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 388.0
LYD2_k127_2869942_19 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 327.0
LYD2_k127_2869942_2 Citrate lyase, alpha subunit (CitF) - - - 8.312e-236 738.0
LYD2_k127_2869942_20 Belongs to the serpin family K13963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 319.0
LYD2_k127_2869942_21 mRNA catabolic process K06950,K09163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007938 301.0
LYD2_k127_2869942_22 Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 315.0
LYD2_k127_2869942_23 MotA TolQ ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 288.0
LYD2_k127_2869942_24 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001535 264.0
LYD2_k127_2869942_25 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003766 259.0
LYD2_k127_2869942_26 TIGRFAM TIGR00268 family protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000251 261.0
LYD2_k127_2869942_27 Putative Fe-S cluster K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000007301 230.0
LYD2_k127_2869942_28 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000001299 226.0
LYD2_k127_2869942_29 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000003698 213.0
LYD2_k127_2869942_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.899e-231 719.0
LYD2_k127_2869942_30 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000002932 190.0
LYD2_k127_2869942_31 TonB family domain protein - - - 0.00000000000000000000000000000000000000000000645 174.0
LYD2_k127_2869942_32 Protein of unknown function (DUF3575) - - - 0.00000000000000000000000000000000000000000002517 168.0
LYD2_k127_2869942_33 Carboxyl transferase domain - - - 0.00000000000000000000000000000000000000000004928 164.0
LYD2_k127_2869942_34 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000000000007956 143.0
LYD2_k127_2869942_35 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000008599 122.0
LYD2_k127_2869942_36 Psort location Cytoplasmic, score - - - 0.00000000000000000001387 91.0
LYD2_k127_2869942_37 DnaJ molecular chaperone homology domain - - - 0.00000000000000001357 89.0
LYD2_k127_2869942_38 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000004161 74.0
LYD2_k127_2869942_39 peptidase - - - 0.00000000001221 77.0
LYD2_k127_2869942_4 Psort location OuterMembrane, score 9.49 - - - 1.457e-215 723.0
LYD2_k127_2869942_5 Voltage gated chloride channel K03281 - - 1.302e-205 655.0
LYD2_k127_2869942_6 Isocitrate isopropylmalate dehydrogenase K00030,K00031,K00052 - 1.1.1.41,1.1.1.42,1.1.1.85 6.795e-197 619.0
LYD2_k127_2869942_7 RnfC Barrel sandwich hybrid domain K03615 - - 2.686e-196 620.0
LYD2_k127_2869942_8 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 565.0
LYD2_k127_2869942_9 Xaa-His dipeptidase K01270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 533.0
LYD2_k127_2876461_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1115.0
LYD2_k127_2876461_1 Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 582.0
LYD2_k127_2876461_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000111 224.0
LYD2_k127_2908762_0 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001177 265.0
LYD2_k127_2908762_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000001969 261.0
LYD2_k127_2908762_2 IPT/TIG domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008804 246.0
LYD2_k127_2908762_3 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000001168 205.0
LYD2_k127_2908762_4 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000008071 190.0
LYD2_k127_2908762_5 Sigma-70 region 2 K03088 - - 0.000000000000000000000000003434 118.0
LYD2_k127_2908762_6 - - - - 0.00000001974 58.0
LYD2_k127_2938611_0 Belongs to the glycosyl hydrolase 32 family K03332 - 3.2.1.80 2.389e-196 625.0
LYD2_k127_2938611_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 610.0
LYD2_k127_2938611_2 PFAM Transposase IS116 IS110 IS902 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 432.0
LYD2_k127_2938611_3 heptosyltransferase K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 301.0
LYD2_k127_2938611_4 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.0000000000000000000000000000000000000000000004735 169.0
LYD2_k127_2938611_5 Domain of unknown function (DUF5009) - - - 0.00000000000000000000000000000000000000000001454 166.0
LYD2_k127_2947922_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 461.0
LYD2_k127_2947922_1 PQQ-like domain K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 429.0
LYD2_k127_2947922_2 LytTr DNA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 393.0
LYD2_k127_2947922_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 391.0
LYD2_k127_2947922_4 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 344.0
LYD2_k127_2947922_5 - K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000006337 239.0
LYD2_k127_2947922_6 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000004665 157.0
LYD2_k127_2947922_7 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000003081 120.0
LYD2_k127_2947922_8 amine dehydrogenase activity - - - 0.00000000000000000000004539 110.0
LYD2_k127_2959005_0 Belongs to the glycosyl hydrolase 43 family - - - 3.175e-306 945.0
LYD2_k127_2959005_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 595.0
LYD2_k127_2959005_10 - - - - 0.0000000000000000000000000000188 126.0
LYD2_k127_2959005_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.0000005297 56.0
LYD2_k127_2959005_13 GDSL-like Lipase/Acylhydrolase - - - 0.000001698 59.0
LYD2_k127_2959005_2 Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 516.0
LYD2_k127_2959005_3 Peptidase family M3 K01284 - 3.4.15.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 452.0
LYD2_k127_2959005_4 Membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 360.0
LYD2_k127_2959005_5 Acetyl xylan esterase (AXE1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 290.0
LYD2_k127_2959005_6 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002894 276.0
LYD2_k127_2959005_7 CYTH - - - 0.000000000000000000000000000000000000000000000000000000000000006905 220.0
LYD2_k127_2959005_8 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000004683 202.0
LYD2_k127_2959005_9 Lysophospholipase l1-like esterase - - - 0.0000000000000000000000000000000593 134.0
LYD2_k127_2966425_0 protein conserved in bacteria - - - 1.592e-208 657.0
LYD2_k127_2966425_1 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005855 285.0
LYD2_k127_2966425_2 Domain of unknown function (DUF4249) - - - 0.0002003 45.0
LYD2_k127_2991430_0 Fibronectin type 3 domain K21571 - - 0.000000000000000000000000000000000000000000000000000000000000000004913 236.0
LYD2_k127_2991430_1 Transglycosylase associated protein - - - 0.0000000000000000000000000000000004134 132.0
LYD2_k127_2991430_2 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000643 122.0
LYD2_k127_3001536_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.798e-294 910.0
LYD2_k127_3001536_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 407.0
LYD2_k127_3001536_10 SPTR Transposase - - - 0.00000000000000000000000000000000000000002797 156.0
LYD2_k127_3001536_12 ketosteroid isomerase - - - 0.000000000000000000000000000000000003927 141.0
LYD2_k127_3001536_13 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000003934 128.0
LYD2_k127_3001536_15 Winged helix DNA-binding domain - - - 0.000000000000000002529 88.0
LYD2_k127_3001536_16 Protein of unknown function (DUF2892) - - - 0.000000000000000004696 85.0
LYD2_k127_3001536_17 Sulfurtransferase - - - 0.00000000007685 65.0
LYD2_k127_3001536_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 315.0
LYD2_k127_3001536_3 phosphoribosylanthranilate isomerase activity K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 285.0
LYD2_k127_3001536_4 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000009258 241.0
LYD2_k127_3001536_5 DoxX K16937 - 1.8.5.2 0.000000000000000000000000000000000000000000000000000000000001474 213.0
LYD2_k127_3001536_6 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000009774 191.0
LYD2_k127_3001536_7 - - - - 0.0000000000000000000000000000000000000000000005939 172.0
LYD2_k127_3001536_8 Predicted membrane protein (DUF2177) - - - 0.00000000000000000000000000000000000000000004305 164.0
LYD2_k127_304982_0 Pfam:KaiC K08482 - - 3.057e-232 732.0
LYD2_k127_304982_1 PFAM Radical SAM - - - 2.408e-196 623.0
LYD2_k127_304982_10 Ig domain protein group 2 domain protein - - - 0.0007192 51.0
LYD2_k127_304982_2 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 584.0
LYD2_k127_304982_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001005 293.0
LYD2_k127_304982_4 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000002333 164.0
LYD2_k127_304982_5 KaiB K08481 - - 0.0000000000000000000000000000000000005553 142.0
LYD2_k127_304982_6 PFAM KaiB domain K08481 - - 0.000000000000000000000000000000001253 133.0
LYD2_k127_304982_7 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000901 127.0
LYD2_k127_304982_8 protein conserved in bacteria (DUF2329) - - - 0.00000000000002292 72.0
LYD2_k127_304982_9 - - - - 0.0001038 51.0
LYD2_k127_306339_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 515.0
LYD2_k127_306339_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 401.0
LYD2_k127_306339_2 lyase activity - - - 0.00000000000000000000001316 114.0
LYD2_k127_3069060_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 337.0
LYD2_k127_3071736_0 PFAM TonB-dependent Receptor Plug - - - 3.633e-242 777.0
LYD2_k127_3071736_1 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000001907 164.0
LYD2_k127_3071736_2 - - - - 0.00000000000009678 80.0
LYD2_k127_3071786_0 Xaa-His dipeptidase K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 580.0
LYD2_k127_3071786_1 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 410.0
LYD2_k127_3071786_2 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.00000000000000000000000000000000000000002723 160.0
LYD2_k127_3071786_3 Cupin domain - - - 0.00000000000000000000000000000000000007957 144.0
LYD2_k127_3071786_4 Major Facilitator Superfamily - - - 0.000000000000000367 78.0
LYD2_k127_3072824_0 serine-type peptidase activity K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 318.0
LYD2_k127_3072824_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002568 253.0
LYD2_k127_3072824_2 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000003858 119.0
LYD2_k127_3072824_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000004013 99.0
LYD2_k127_310712_0 SIS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 451.0
LYD2_k127_310712_1 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 308.0
LYD2_k127_310712_2 Periplasmic copper-binding protein (NosD) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000549 247.0
LYD2_k127_310712_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000003222 168.0
LYD2_k127_310712_4 nickel cation binding K04651 - - 0.000000000000001379 80.0
LYD2_k127_310712_5 Sugar (and other) transporter - - - 0.00001595 48.0
LYD2_k127_315464_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1732.0
LYD2_k127_315464_1 CotH kinase protein - - - 1.564e-219 700.0
LYD2_k127_315464_2 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 399.0
LYD2_k127_315464_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001199 262.0
LYD2_k127_315464_4 SdiA-regulated - - - 0.0000000000000000000000000000000000000000000000000000000000000006843 231.0
LYD2_k127_315464_5 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000004556 145.0
LYD2_k127_315464_6 Tellurite resistance protein TerB - - - 0.00000000000000334 81.0
LYD2_k127_315464_7 Belongs to the ompA family - - - 0.00000000000006543 78.0
LYD2_k127_315464_8 lytic transglycosylase activity K08307 - - 0.000001305 57.0
LYD2_k127_315464_9 FMN_bind - - - 0.000002001 56.0
LYD2_k127_3161083_0 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000004122 147.0
LYD2_k127_3161083_1 Outer membrane protein beta-barrel domain - - - 0.000000000000007973 85.0
LYD2_k127_3161083_2 Putative binding domain, N-terminal - - - 0.000000002844 70.0
LYD2_k127_3161083_3 Putative binding domain, N-terminal - - - 0.00000007964 65.0
LYD2_k127_3161083_4 Protein conserved in bacteria - - - 0.0000001831 64.0
LYD2_k127_3192629_0 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.0 1297.0
LYD2_k127_3192629_1 Psort location OuterMembrane, score - - - 0.0 1066.0
LYD2_k127_3192629_2 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 3.362e-204 640.0
LYD2_k127_3192629_3 Psort location Cytoplasmic, score 8.96 K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 360.0
LYD2_k127_3192818_0 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 331.0
LYD2_k127_3192818_1 4-phosphoerythronate dehydrogenase activity K00058 GO:0003674,GO:0003824,GO:0004617,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008219,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0012501,GO:0016053,GO:0016491,GO:0016597,GO:0016614,GO:0016616,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047545,GO:0055114,GO:0070905,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000004228 223.0
LYD2_k127_3192818_2 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000001859 149.0
LYD2_k127_3192818_3 - - - - 0.00000000000000000000000008691 114.0
LYD2_k127_3192818_4 4-phosphoerythronate dehydrogenase activity K00058 GO:0003674,GO:0003824,GO:0004617,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008219,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0012501,GO:0016053,GO:0016491,GO:0016597,GO:0016614,GO:0016616,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047545,GO:0055114,GO:0070905,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.399,1.1.1.95 0.0000000000005248 69.0
LYD2_k127_3198178_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1275.0
LYD2_k127_3213973_0 RNA polymerase I subunit A N-terminus K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2344.0
LYD2_k127_3213973_1 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2145.0
LYD2_k127_3213973_10 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000008522 211.0
LYD2_k127_3213973_11 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000000000000000000000001693 216.0
LYD2_k127_3213973_12 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000139 198.0
LYD2_k127_3213973_13 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000007844 186.0
LYD2_k127_3213973_14 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000007893 158.0
LYD2_k127_3213973_15 RNA methyltransferase, TrmH K03437 - - 0.0000000000000000000000000001685 120.0
LYD2_k127_3213973_16 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.000000000000000000000000002367 113.0
LYD2_k127_3213973_17 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000005486 121.0
LYD2_k127_3213973_18 Ribosomal protein S21 K02970 - - 0.00000000000000000000001334 100.0
LYD2_k127_3213973_19 SecE/Sec61-gamma subunits of protein translocation complex K03073 - - 0.00000000000000005269 81.0
LYD2_k127_3213973_2 Elongation factor Tu C-terminal domain K02358 - - 2.222e-230 716.0
LYD2_k127_3213973_22 - - - - 0.00003852 47.0
LYD2_k127_3213973_3 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 587.0
LYD2_k127_3213973_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 380.0
LYD2_k127_3213973_5 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 322.0
LYD2_k127_3213973_6 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 289.0
LYD2_k127_3213973_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000002042 240.0
LYD2_k127_3213973_8 Ribosomal protein L10 K02864 - - 0.0000000000000000000000000000000000000000000000000000000000007477 214.0
LYD2_k127_3213973_9 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000001215 214.0
LYD2_k127_3214046_0 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 344.0
LYD2_k127_3214046_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 285.0
LYD2_k127_3214046_2 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.0000000009311 59.0
LYD2_k127_3216825_0 AMP-binding enzyme C-terminal domain K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 587.0
LYD2_k127_3216825_1 EcsC protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 365.0
LYD2_k127_3216825_2 Domain of unknown function (DUF4918) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 327.0
LYD2_k127_3216825_3 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 312.0
LYD2_k127_3216825_4 - - - - 0.000000000000000000000000000000000000000000000000000000699 196.0
LYD2_k127_3216825_5 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000311 205.0
LYD2_k127_3223933_0 Fibronectin type 3 domain K21571 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 396.0
LYD2_k127_3223933_1 Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 334.0
LYD2_k127_3223933_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 346.0
LYD2_k127_3223933_3 Fibronectin type 3 domain K21571 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008218 333.0
LYD2_k127_3223933_4 Fibronectin type 3 domain K21571 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 314.0
LYD2_k127_3223933_5 Peptidase, M28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000276 276.0
LYD2_k127_3223933_6 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000001491 158.0
LYD2_k127_3223933_7 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000001137 123.0
LYD2_k127_3223933_8 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.00000001977 67.0
LYD2_k127_3257909_0 Pyruvate formate lyase-like K00656,K18427 - 2.3.1.54,4.1.1.83 0.0 1161.0
LYD2_k127_3257909_1 Domain of Unknown Function (DUF1080) - - - 1.03e-293 938.0
LYD2_k127_3257909_10 COGs COG2610 H gluconate symporter and related permease K03299 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 354.0
LYD2_k127_3257909_11 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 340.0
LYD2_k127_3257909_12 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 329.0
LYD2_k127_3257909_13 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 318.0
LYD2_k127_3257909_14 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001565 268.0
LYD2_k127_3257909_15 Beta-Casp domain K07576 - - 0.0000000000000000000000000001005 116.0
LYD2_k127_3257909_16 NfeD-like C-terminal, partner-binding - - - 0.0000000000000000000000000005855 120.0
LYD2_k127_3257909_17 Cytidylate kinase-like family - - - 0.00000000000000000000000008037 117.0
LYD2_k127_3257909_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.517e-220 689.0
LYD2_k127_3257909_3 Psort location Cytoplasmic, score K00027,K00029 - 1.1.1.38,1.1.1.40 5.09e-201 633.0
LYD2_k127_3257909_4 alpha-L-fucosidase K01206 - 3.2.1.51 7.516e-199 631.0
LYD2_k127_3257909_5 Transporter gate domain protein K06373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 561.0
LYD2_k127_3257909_6 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 514.0
LYD2_k127_3257909_7 Hydroxypyruvate reductase K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 447.0
LYD2_k127_3257909_8 C-terminal region of band_7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 430.0
LYD2_k127_3257909_9 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 417.0
LYD2_k127_3259192_0 Protein of unknown function (DUF2723) - - - 0.0 1027.0
LYD2_k127_3259192_1 ATP-binding cassette protein, ChvD family - - - 1.053e-290 900.0
LYD2_k127_3259192_10 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 327.0
LYD2_k127_3259192_11 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 302.0
LYD2_k127_3259192_12 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000001413 158.0
LYD2_k127_3259192_13 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000001447 118.0
LYD2_k127_3259192_14 ATP synthase K02114 - - 0.00000000000000000000004415 100.0
LYD2_k127_3259192_15 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000005509 100.0
LYD2_k127_3259192_16 Histidine kinase - - - 0.0000000000000000004899 93.0
LYD2_k127_3259192_17 - - - - 0.00000000000002646 78.0
LYD2_k127_3259192_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.559e-270 839.0
LYD2_k127_3259192_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.981e-258 802.0
LYD2_k127_3259192_4 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008214 606.0
LYD2_k127_3259192_5 Belongs to the glycosyl hydrolase 28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 599.0
LYD2_k127_3259192_6 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 486.0
LYD2_k127_3259192_7 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 422.0
LYD2_k127_3259192_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 356.0
LYD2_k127_3259192_9 Peptidase, M28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 361.0
LYD2_k127_3259701_0 ribosylpyrimidine nucleosidase activity - - - 2.825e-292 939.0
LYD2_k127_3259701_1 alpha-galactosidase - - - 6.008e-194 614.0
LYD2_k127_3259701_10 Domain of unknown function (DUF4976) - - - 0.00001094 48.0
LYD2_k127_3259701_11 - - - - 0.00008252 53.0
LYD2_k127_3259701_2 Alpha galactosidase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 588.0
LYD2_k127_3259701_3 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 550.0
LYD2_k127_3259701_4 Anaerobic sulfatase maturase K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 489.0
LYD2_k127_3259701_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000009656 231.0
LYD2_k127_3259701_6 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000008496 170.0
LYD2_k127_3259701_7 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000002532 135.0
LYD2_k127_3259701_8 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000001065 121.0
LYD2_k127_3259701_9 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0000000000000001835 80.0
LYD2_k127_3265559_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 3.597e-266 829.0
LYD2_k127_3265559_1 ABC-2 type transporter - - - 4.405e-261 838.0
LYD2_k127_3265559_10 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 439.0
LYD2_k127_3265559_11 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 376.0
LYD2_k127_3265559_12 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 349.0
LYD2_k127_3265559_13 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 355.0
LYD2_k127_3265559_14 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 295.0
LYD2_k127_3265559_15 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 287.0
LYD2_k127_3265559_16 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000006399 228.0
LYD2_k127_3265559_17 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000001692 218.0
LYD2_k127_3265559_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000003746 201.0
LYD2_k127_3265559_19 phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000009355 181.0
LYD2_k127_3265559_2 ABC-2 type transporter - - - 1.353e-245 794.0
LYD2_k127_3265559_20 - - - - 0.00000000000000000000000000000000000000000000001797 180.0
LYD2_k127_3265559_21 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000000000000000000003027 170.0
LYD2_k127_3265559_22 rod shape-determining protein MreD - - - 0.0000000000000000000000000000000000000001365 155.0
LYD2_k127_3265559_23 Belongs to the ompA family - - - 0.00000000000000000000000000003201 135.0
LYD2_k127_3265559_24 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.0000000000000000002923 90.0
LYD2_k127_3265559_25 Type IX secretion system membrane protein PorP/SprF - - - 0.000000003446 68.0
LYD2_k127_3265559_3 cyclic 2,3-diphosphoglycerate synthetase activity - - - 7.482e-227 709.0
LYD2_k127_3265559_4 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 8.334e-215 678.0
LYD2_k127_3265559_5 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 3.173e-205 655.0
LYD2_k127_3265559_6 pfkB family carbohydrate kinase K00874 - 2.7.1.45 3.281e-198 621.0
LYD2_k127_3265559_7 Rod shape-determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 561.0
LYD2_k127_3265559_8 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 527.0
LYD2_k127_3265559_9 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 471.0
LYD2_k127_3272116_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1547.0
LYD2_k127_3272116_1 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0 1234.0
LYD2_k127_3272116_10 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 558.0
LYD2_k127_3272116_11 impB/mucB/samB family K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 534.0
LYD2_k127_3272116_12 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 530.0
LYD2_k127_3272116_13 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 499.0
LYD2_k127_3272116_14 FAD linked oxidase domain protein K00803,K11472 - 2.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 498.0
LYD2_k127_3272116_15 Phosphate acetyl/butaryl transferase K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 473.0
LYD2_k127_3272116_16 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 498.0
LYD2_k127_3272116_17 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 451.0
LYD2_k127_3272116_18 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 449.0
LYD2_k127_3272116_19 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 443.0
LYD2_k127_3272116_2 FAD linked oxidases, C-terminal domain - - - 0.0 1034.0
LYD2_k127_3272116_20 Major Facilitator Superfamily K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 445.0
LYD2_k127_3272116_21 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
LYD2_k127_3272116_22 radical SAM domain protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 439.0
LYD2_k127_3272116_23 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00226,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 434.0
LYD2_k127_3272116_24 Acetokinase family K00929 - 2.7.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 428.0
LYD2_k127_3272116_25 Aldose 1-epimerase K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 415.0
LYD2_k127_3272116_26 phosphate butyryltransferase K00634 - 2.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 406.0
LYD2_k127_3272116_27 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 396.0
LYD2_k127_3272116_28 Transporter, major facilitator family protein K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 392.0
LYD2_k127_3272116_29 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 380.0
LYD2_k127_3272116_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.165e-256 807.0
LYD2_k127_3272116_30 phosphate butyryltransferase K00634 - 2.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 351.0
LYD2_k127_3272116_31 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 343.0
LYD2_k127_3272116_32 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 350.0
LYD2_k127_3272116_33 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 332.0
LYD2_k127_3272116_34 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 328.0
LYD2_k127_3272116_35 (2R)-phospho-3-sulfolactate synthase (ComA) K08097 - 4.4.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 326.0
LYD2_k127_3272116_36 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001362 284.0
LYD2_k127_3272116_37 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005466 280.0
LYD2_k127_3272116_38 hydrolase, carbon-nitrogen family K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003251 274.0
LYD2_k127_3272116_39 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001033 277.0
LYD2_k127_3272116_4 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.476e-239 754.0
LYD2_k127_3272116_40 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001045 274.0
LYD2_k127_3272116_41 COG0169 Shikimate 5-dehydrogenase K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000003745 259.0
LYD2_k127_3272116_42 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001365 250.0
LYD2_k127_3272116_43 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001066 244.0
LYD2_k127_3272116_44 Protease prsW family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009469 235.0
LYD2_k127_3272116_45 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000283 239.0
LYD2_k127_3272116_46 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000000000000000000000000000000000000000001831 206.0
LYD2_k127_3272116_47 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.0000000000000000000000000000000000000000000000000000000002453 211.0
LYD2_k127_3272116_48 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000008931 205.0
LYD2_k127_3272116_49 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000003246 196.0
LYD2_k127_3272116_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 1.456e-231 737.0
LYD2_k127_3272116_50 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000001633 198.0
LYD2_k127_3272116_51 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000004928 193.0
LYD2_k127_3272116_52 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000007003 169.0
LYD2_k127_3272116_53 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000003247 169.0
LYD2_k127_3272116_54 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000009299 163.0
LYD2_k127_3272116_55 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000841 154.0
LYD2_k127_3272116_56 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000001044 155.0
LYD2_k127_3272116_57 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000004405 151.0
LYD2_k127_3272116_58 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000001224 144.0
LYD2_k127_3272116_59 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000001516 126.0
LYD2_k127_3272116_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 2.872e-216 677.0
LYD2_k127_3272116_60 FAD linked oxidases, C-terminal domain K06911 - - 0.0000000000000000000000000001251 117.0
LYD2_k127_3272116_61 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000008615 119.0
LYD2_k127_3272116_62 Domain of unknown function (DUF4252) - - - 0.00000000000000000000000001744 115.0
LYD2_k127_3272116_63 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000001563 104.0
LYD2_k127_3272116_64 long-chain fatty acid transport protein - - - 0.00000000000000000008128 96.0
LYD2_k127_3272116_65 - - - - 0.00000000000000002042 89.0
LYD2_k127_3272116_66 Domain of unknown function (DUF1987) - - - 0.00000000000000002255 88.0
LYD2_k127_3272116_67 Domain of unknown function (DUF4252) - - - 0.000000000000002667 82.0
LYD2_k127_3272116_69 - - - - 0.000001971 57.0
LYD2_k127_3272116_7 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 610.0
LYD2_k127_3272116_70 - - - - 0.000002178 49.0
LYD2_k127_3272116_8 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 599.0
LYD2_k127_3272116_9 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 597.0
LYD2_k127_3274958_0 COG3387 Glucoamylase and related glycosyl K01178 - 3.2.1.3 6.447e-230 726.0
LYD2_k127_3274958_1 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 1.224e-218 700.0
LYD2_k127_3274958_2 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000006048 210.0
LYD2_k127_3274958_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000001938 139.0
LYD2_k127_3274958_4 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000002581 106.0
LYD2_k127_3281137_0 Phosphoesterase family - - - 0.0 1355.0
LYD2_k127_330597_0 Saccharopine dehydrogenase K00293 - 1.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 468.0
LYD2_k127_330597_1 SIS domain K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 428.0
LYD2_k127_330597_2 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 357.0
LYD2_k127_330597_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000001576 100.0
LYD2_k127_3316710_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.917e-230 737.0
LYD2_k127_3318958_0 Prokaryotic cytochrome b561 - - - 2.319e-297 918.0
LYD2_k127_3318958_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.056e-203 644.0
LYD2_k127_3318958_10 Glycosyl hydrolase family 63 C-terminal domain - - - 0.00000000000001845 72.0
LYD2_k127_3318958_11 dihydrofolate reductase activity - - - 0.0000000000003288 76.0
LYD2_k127_3318958_12 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000007082 61.0
LYD2_k127_3318958_13 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.00001872 47.0
LYD2_k127_3318958_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 442.0
LYD2_k127_3318958_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 422.0
LYD2_k127_3318958_4 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 310.0
LYD2_k127_3318958_5 TIGR02757 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 302.0
LYD2_k127_3318958_6 Reductase K06221 - 1.1.1.346 0.00000000000000000000000000000000000000000000000000000000000001476 216.0
LYD2_k127_3318958_7 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000001347 193.0
LYD2_k127_3318958_8 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000001273 103.0
LYD2_k127_3318958_9 mttA/Hcf106 family K03116 - - 0.0000000000000009608 83.0
LYD2_k127_3322652_0 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 464.0
LYD2_k127_3322652_1 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 436.0
LYD2_k127_3322652_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 432.0
LYD2_k127_3322652_3 Alanine dehydrogenase/PNT, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 421.0
LYD2_k127_3322652_4 Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 405.0
LYD2_k127_3322652_5 Telomere recombination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 293.0
LYD2_k127_3322652_6 ComEC Rec2-like protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000003157 241.0
LYD2_k127_3322652_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000001032 110.0
LYD2_k127_3322652_8 Protein of unknown function (DUF4199) - - - 0.00000000000002143 80.0
LYD2_k127_3335713_0 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 304.0
LYD2_k127_3335713_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005566 290.0
LYD2_k127_3335713_2 Nitric oxide reductase large subunit K04561 - 1.7.2.5 0.000000000000000000000000000000000000000000000000000000000000000003537 228.0
LYD2_k127_3394128_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 1.096e-232 745.0
LYD2_k127_3394128_1 PFAM WD40-like beta Propeller - - - 3.207e-207 683.0
LYD2_k127_3394128_10 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003736 278.0
LYD2_k127_3394128_11 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005962 276.0
LYD2_k127_3394128_12 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000143 239.0
LYD2_k127_3394128_13 Crp Fnr family K21556 - - 0.00000000000000000000000000000000000000000000000000000000000000242 226.0
LYD2_k127_3394128_14 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000002224 206.0
LYD2_k127_3394128_15 4Fe-4S binding domain - - - 0.0000000000000000000000000003266 113.0
LYD2_k127_3394128_16 Outer membrane protein beta-barrel domain - - - 0.0000000000001445 79.0
LYD2_k127_3394128_17 COG NOG23390 non supervised orthologous group - - - 0.0000000000001774 79.0
LYD2_k127_3394128_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.946e-205 653.0
LYD2_k127_3394128_3 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 594.0
LYD2_k127_3394128_4 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 549.0
LYD2_k127_3394128_5 Lao Ao transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 434.0
LYD2_k127_3394128_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 310.0
LYD2_k127_3394128_7 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 317.0
LYD2_k127_3394128_8 AhpC Tsa family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 307.0
LYD2_k127_3394128_9 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002456 271.0
LYD2_k127_3409433_0 Iron hydrogenase small subunit K18332 - 1.12.1.3 5.651e-277 862.0
LYD2_k127_3409433_1 Acylphosphatase K04656 - - 2.563e-219 703.0
LYD2_k127_3409433_10 AIR synthase related protein, C-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 343.0
LYD2_k127_3409433_11 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 341.0
LYD2_k127_3409433_12 2 iron, 2 sulfur cluster binding K00528,K02823,K16951 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 304.0
LYD2_k127_3409433_13 Glycosyl hydrolases family 35 K12308 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000001183 229.0
LYD2_k127_3409433_14 Belongs to the transketolase family K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000002575 227.0
LYD2_k127_3409433_15 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000581 222.0
LYD2_k127_3409433_16 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000168 212.0
LYD2_k127_3409433_17 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000002501 190.0
LYD2_k127_3409433_18 4 iron, 4 sulfur cluster binding K00331,K14088,K14105 - 1.6.5.3 0.0000000000000000000000000000000000000000000000003157 180.0
LYD2_k127_3409433_19 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000009322 176.0
LYD2_k127_3409433_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.844e-204 642.0
LYD2_k127_3409433_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K12143 - - 0.000000000000000000000000000000000000000000002227 171.0
LYD2_k127_3409433_21 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family - - - 0.0000000000000000000000000000000000000000319 164.0
LYD2_k127_3409433_22 Na H ion antiporter subunit K05569 - - 0.000000000000000000000000000000000000001263 152.0
LYD2_k127_3409433_23 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.00000000000000000000000000000000007608 138.0
LYD2_k127_3409433_24 COG NOG19094 non supervised orthologous group - - - 0.00000000000000000000000000003715 119.0
LYD2_k127_3409433_25 PFAM NADH-ubiquinone oxidoreductase chain 4L K05567 - - 0.0000000000000000000000002263 112.0
LYD2_k127_3409433_26 Multisubunit Na H antiporter K05566 - - 0.0000000000000000002804 93.0
LYD2_k127_3409433_27 hydrogenase maturation protease HycI K08315 - 3.4.23.51 0.0000000000000000004816 92.0
LYD2_k127_3409433_28 monovalent cation:proton antiporter activity K05571 - - 0.000000000000000008586 86.0
LYD2_k127_3409433_29 HupF/HypC family K04653 - - 0.0000000000000001319 82.0
LYD2_k127_3409433_3 ABC transporter, ATP-binding protein K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 617.0
LYD2_k127_3409433_30 4 iron, 4 sulfur cluster binding K00196,K05796,K12136,K15827 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044464,GO:0055114 - 0.0000000000000003374 85.0
LYD2_k127_3409433_31 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341,K05565 - 1.6.5.3 0.000000000000002934 82.0
LYD2_k127_3409433_32 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000001519 81.0
LYD2_k127_3409433_33 Multiple resistance and pH regulation protein F K05570 - - 0.00000000002358 67.0
LYD2_k127_3409433_35 - - - - 0.000000007065 63.0
LYD2_k127_3409433_36 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000382 58.0
LYD2_k127_3409433_37 long-chain fatty acid transport protein - - - 0.0000006042 60.0
LYD2_k127_3409433_4 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 529.0
LYD2_k127_3409433_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 516.0
LYD2_k127_3409433_6 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 471.0
LYD2_k127_3409433_7 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 414.0
LYD2_k127_3409433_8 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 387.0
LYD2_k127_3409433_9 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 365.0
LYD2_k127_3426283_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 1.944e-314 981.0
LYD2_k127_3426283_1 Belongs to the ribulokinase family K00853 - 2.7.1.16 2.794e-250 782.0
LYD2_k127_3426283_10 pfam nudix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002191 253.0
LYD2_k127_3426283_2 L-arabinose isomerase K01804 - 5.3.1.4 1.091e-217 685.0
LYD2_k127_3426283_3 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 2.121e-206 654.0
LYD2_k127_3426283_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 1.989e-204 650.0
LYD2_k127_3426283_5 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 581.0
LYD2_k127_3426283_6 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 401.0
LYD2_k127_3426283_7 L-ribulose-5-phosphate 4-epimerase K03077 - 5.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 321.0
LYD2_k127_3426283_8 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 312.0
LYD2_k127_3426283_9 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008651 269.0
LYD2_k127_3457470_0 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 529.0
LYD2_k127_3457470_1 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 354.0
LYD2_k127_3472001_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.962e-294 912.0
LYD2_k127_3472001_1 amine dehydrogenase activity K19668,K20276 - 3.2.1.91 0.0000000000008341 78.0
LYD2_k127_348094_0 C-terminal, D2-small domain, of ClpB protein K03695 - - 0.0 1140.0
LYD2_k127_348094_1 Protein of unknown function (DUF1015) - - - 9.542e-200 629.0
LYD2_k127_348094_2 Aminotransferase class-V K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 532.0
LYD2_k127_348094_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 522.0
LYD2_k127_348094_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 399.0
LYD2_k127_348094_5 Alanine racemase, N-terminal domain K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002019 273.0
LYD2_k127_348094_6 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001025 273.0
LYD2_k127_348094_7 COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000001775 192.0
LYD2_k127_348094_8 Histidine kinase - - - 0.0000000000000000009414 90.0
LYD2_k127_348094_9 STAS domain K04749 - - 0.0000000000000004233 82.0
LYD2_k127_3485010_0 Aconitase family (aconitate hydratase) K01703,K01704,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 2.853e-257 805.0
LYD2_k127_3485010_1 Aconitase family (aconitate hydratase) K01703,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 406.0
LYD2_k127_3485010_2 Aconitase family (aconitate hydratase) K01703,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 401.0
LYD2_k127_3485010_3 - - - - 0.0000000000000000000000000000000000000000000000000000000009224 209.0
LYD2_k127_3485010_4 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000003163 192.0
LYD2_k127_34967_0 Peptidoglycan synthetase K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 528.0
LYD2_k127_34967_1 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 371.0
LYD2_k127_34967_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000027 272.0
LYD2_k127_34967_3 Phospholipase D. Active site motifs. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001477 275.0
LYD2_k127_34967_4 Ribosomal protein S20 K02968 - - 0.000000000000000000000005104 103.0
LYD2_k127_34967_5 - - - - 0.0007745 42.0
LYD2_k127_3526708_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 601.0
LYD2_k127_3526708_1 Von Willebrand factor A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 407.0
LYD2_k127_3526708_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000008253 172.0
LYD2_k127_3526708_11 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000006583 166.0
LYD2_k127_3526708_12 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000002475 134.0
LYD2_k127_3526708_13 Protein conserved in bacteria - - - 0.00000000000000000002456 95.0
LYD2_k127_3526708_15 Putative binding domain, N-terminal - - - 0.000000008974 68.0
LYD2_k127_3526708_16 Melibiase K07407 - 3.2.1.22 0.0001024 46.0
LYD2_k127_3526708_2 Glucokinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 389.0
LYD2_k127_3526708_3 Glucokinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 353.0
LYD2_k127_3526708_4 Pectate lyase superfamily protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 358.0
LYD2_k127_3526708_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 319.0
LYD2_k127_3526708_6 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 316.0
LYD2_k127_3526708_7 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004282 282.0
LYD2_k127_3526708_8 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000002431 244.0
LYD2_k127_3526708_9 Carbohydrate-binding family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000004732 220.0
LYD2_k127_3539773_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1120.0
LYD2_k127_3539773_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 526.0
LYD2_k127_3539773_2 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 438.0
LYD2_k127_3539773_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 349.0
LYD2_k127_3539773_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001664 272.0
LYD2_k127_3544047_0 transmembrane transporter activity K08191 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 454.0
LYD2_k127_3544047_1 Glycoside Hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 311.0
LYD2_k127_3544047_3 Domain of unknown function (DUF4251) - - - 0.0000000002027 68.0
LYD2_k127_3544047_4 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000006142 68.0
LYD2_k127_35467_0 RecG wedge domain K03655 - 3.6.4.12 6.664e-278 870.0
LYD2_k127_35467_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.652e-226 708.0
LYD2_k127_35467_10 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000000000000000000000002183 204.0
LYD2_k127_35467_11 3'-5' exonuclease - - - 0.0000000000000000000000000000000000000000000000000000002828 199.0
LYD2_k127_35467_12 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000002692 190.0
LYD2_k127_35467_13 Domain of unknown function (DUF5063) - - - 0.00000000000000000000000000000000000000000000001365 179.0
LYD2_k127_35467_14 Protein of unknown function (DUF2795) - - - 0.00000000000000000000000000000000000000005348 151.0
LYD2_k127_35467_15 Positive regulator of sigma(E), RseC MucC K03803 - - 0.0000000000000000000000271 105.0
LYD2_k127_35467_16 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.00000004304 55.0
LYD2_k127_35467_2 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 7.799e-225 713.0
LYD2_k127_35467_3 Domain of Unknown Function (DUF1080) - - - 2.003e-197 622.0
LYD2_k127_35467_4 OstA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 421.0
LYD2_k127_35467_5 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 401.0
LYD2_k127_35467_6 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 416.0
LYD2_k127_35467_7 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 338.0
LYD2_k127_35467_8 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 332.0
LYD2_k127_35467_9 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000005023 207.0
LYD2_k127_3564901_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008124 543.0
LYD2_k127_3564901_1 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 507.0
LYD2_k127_3564901_2 PCRF K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 463.0
LYD2_k127_3564901_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 454.0
LYD2_k127_3564901_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000625 265.0
LYD2_k127_3574424_0 Psort location OuterMembrane, score 9.52 K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 347.0
LYD2_k127_3574424_1 PFAM Archaeal ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000004308 240.0
LYD2_k127_3574424_2 PFAM WD domain, G-beta repeat - - - 0.000000000002503 81.0
LYD2_k127_3574424_3 Outer membrane protein beta-barrel domain - - - 0.0000000003223 72.0
LYD2_k127_3588465_0 TonB dependent receptor - - - 0.0 1249.0
LYD2_k127_3588465_1 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 500.0
LYD2_k127_3588465_2 SPTR NmrA family protein - - - 0.000000000008768 68.0
LYD2_k127_3588465_3 Serine aminopeptidase, S33 - - - 0.000007018 51.0
LYD2_k127_358859_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 499.0
LYD2_k127_358859_1 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 345.0
LYD2_k127_358859_2 family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 294.0
LYD2_k127_358859_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 291.0
LYD2_k127_358859_4 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000001714 223.0
LYD2_k127_358859_5 Signal transduction histidine kinase, LytS - - - 0.00000000000000000000000000000000000000000000000000000000001605 229.0
LYD2_k127_358859_6 - - - - 0.000008192 54.0
LYD2_k127_36128_0 Glycosyl hydrolase family 3 N terminal domain - - - 1.744e-304 962.0
LYD2_k127_36128_1 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 1.295e-234 729.0
LYD2_k127_36128_10 PFAM peptidase T2 asparaginase 2 K01444,K13051 - 3.4.19.5,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 350.0
LYD2_k127_36128_11 P-loop ATPase protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 302.0
LYD2_k127_36128_12 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000007583 229.0
LYD2_k127_36128_13 PFAM Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000009043 207.0
LYD2_k127_36128_14 Belongs to the helicase family. UvrD subfamily - - - 0.000000000001025 69.0
LYD2_k127_36128_2 PFAM Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 600.0
LYD2_k127_36128_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 531.0
LYD2_k127_36128_4 carboxynorspermidine decarboxylase K13747 - 4.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 530.0
LYD2_k127_36128_5 Amino acid kinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 515.0
LYD2_k127_36128_6 Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 496.0
LYD2_k127_36128_7 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 468.0
LYD2_k127_36128_8 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 413.0
LYD2_k127_36128_9 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008462 387.0
LYD2_k127_3662229_0 racemase activity, acting on amino acids and derivatives K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002464 282.0
LYD2_k127_3662229_1 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000005911 221.0
LYD2_k127_3675572_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1073.0
LYD2_k127_3675572_1 Beta-L-arabinofuranosidase, GH127 K09955 - - 3.701e-275 859.0
LYD2_k127_3675572_10 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008031 392.0
LYD2_k127_3675572_11 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 374.0
LYD2_k127_3675572_12 Polyprenyl synthetase K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 370.0
LYD2_k127_3675572_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 361.0
LYD2_k127_3675572_14 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 346.0
LYD2_k127_3675572_15 COG COG0383 Alpha-mannosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 327.0
LYD2_k127_3675572_16 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 319.0
LYD2_k127_3675572_17 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 291.0
LYD2_k127_3675572_18 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001252 304.0
LYD2_k127_3675572_19 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000004418 256.0
LYD2_k127_3675572_2 mannose-6-phosphate isomerase, class I - - - 1.87e-231 730.0
LYD2_k127_3675572_20 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007372 235.0
LYD2_k127_3675572_21 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000001605 212.0
LYD2_k127_3675572_22 - - - - 0.00000000000000000000000000000000000000000000000000000000001108 216.0
LYD2_k127_3675572_23 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000009184 198.0
LYD2_k127_3675572_24 AsmA-like C-terminal region - - - 0.00000000000000000000000000000000000000000000000000001527 211.0
LYD2_k127_3675572_25 COG COG1387 Histidinol phosphatase and related hydrolases of the PHP family K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000004622 196.0
LYD2_k127_3675572_26 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000000000000000002961 150.0
LYD2_k127_3675572_27 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000000000000008808 142.0
LYD2_k127_3675572_28 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000013 132.0
LYD2_k127_3675572_29 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000007464 112.0
LYD2_k127_3675572_3 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.01e-214 674.0
LYD2_k127_3675572_30 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000004997 113.0
LYD2_k127_3675572_31 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000007388 100.0
LYD2_k127_3675572_32 CoA binding domain K06929 - - 0.000000000000000002107 91.0
LYD2_k127_3675572_33 Mo-molybdopterin cofactor metabolic process K03636 - - 0.0000004386 55.0
LYD2_k127_3675572_34 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00002848 47.0
LYD2_k127_3675572_35 COG COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000607 53.0
LYD2_k127_3675572_4 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 2.577e-200 631.0
LYD2_k127_3675572_5 COG COG0383 Alpha-mannosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 611.0
LYD2_k127_3675572_6 Long-chain acyl-CoA synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 583.0
LYD2_k127_3675572_7 Peptidase family U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009784 559.0
LYD2_k127_3675572_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 561.0
LYD2_k127_3675572_9 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 479.0
LYD2_k127_3810823_0 FAD linked oxidase domain protein - - - 4.557e-235 742.0
LYD2_k127_3810823_1 Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 548.0
LYD2_k127_3810823_10 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000000000000000000000000000000000000000182 248.0
LYD2_k127_3810823_11 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000004185 201.0
LYD2_k127_3810823_12 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000009841 199.0
LYD2_k127_3810823_13 leucine- rich repeat protein - - - 0.0000000000000000000000000000000000000000000000003356 187.0
LYD2_k127_3810823_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000005666 175.0
LYD2_k127_3810823_15 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000000000154 158.0
LYD2_k127_3810823_16 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000000000000000003912 104.0
LYD2_k127_3810823_17 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000007761 78.0
LYD2_k127_3810823_18 metal-dependent membrane protease K07052 - - 0.00000000000001229 83.0
LYD2_k127_3810823_19 PFAM blue (type 1) copper domain protein - - - 0.00000000000002208 81.0
LYD2_k127_3810823_2 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 512.0
LYD2_k127_3810823_20 domain protein - - - 0.00000000001095 79.0
LYD2_k127_3810823_21 Protein of unknown function (DUF1761) - - - 0.000000001855 64.0
LYD2_k127_3810823_22 - - - - 0.000000009225 57.0
LYD2_k127_3810823_23 amine dehydrogenase activity - - - 0.00000001075 69.0
LYD2_k127_3810823_24 Flavodoxin-like fold K00355 - 1.6.5.2 0.0000001217 55.0
LYD2_k127_3810823_25 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000005391 61.0
LYD2_k127_3810823_26 Psort location Cytoplasmic, score - - - 0.0008666 51.0
LYD2_k127_3810823_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 475.0
LYD2_k127_3810823_4 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 466.0
LYD2_k127_3810823_5 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 407.0
LYD2_k127_3810823_6 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 350.0
LYD2_k127_3810823_7 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 300.0
LYD2_k127_3810823_8 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003023 275.0
LYD2_k127_3810823_9 ribonuclease inhibitor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001382 231.0
LYD2_k127_3813745_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833,K03851,K12256,K15372 - 2.6.1.113,2.6.1.55,2.6.1.62,2.6.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000007558 273.0
LYD2_k127_3813745_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000196 229.0
LYD2_k127_3813745_2 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000009527 208.0
LYD2_k127_3814362_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1201.0
LYD2_k127_3814362_1 ATPase family associated with various cellular activities (AAA) K03696 - - 0.0 1175.0
LYD2_k127_3814362_10 CoA binding domain K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 472.0
LYD2_k127_3814362_11 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 470.0
LYD2_k127_3814362_12 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 453.0
LYD2_k127_3814362_13 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 461.0
LYD2_k127_3814362_14 CAAX prenyl protease N-terminal, five membrane helices K03799,K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 451.0
LYD2_k127_3814362_15 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 371.0
LYD2_k127_3814362_16 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000008027 245.0
LYD2_k127_3814362_17 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000000000000000003904 198.0
LYD2_k127_3814362_18 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000009303 192.0
LYD2_k127_3814362_19 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000000008771 182.0
LYD2_k127_3814362_2 Uncharacterised conserved protein (DUF2156) K14205 - 2.3.2.3 8.912e-312 977.0
LYD2_k127_3814362_20 - - - - 0.00000000000000000000000000000000000000000534 171.0
LYD2_k127_3814362_21 growth of symbiont in host cell - - - 0.00000000000000000000000000000000000001642 154.0
LYD2_k127_3814362_22 polysaccharide deacetylase - - - 0.0000000000000000000000000000000008947 140.0
LYD2_k127_3814362_23 Ribosomal L28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000004225 121.0
LYD2_k127_3814362_24 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000001468 115.0
LYD2_k127_3814362_25 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000002819 105.0
LYD2_k127_3814362_26 Bacterial Ig-like domain (group 2) - - - 0.0000000000000000001597 98.0
LYD2_k127_3814362_27 Domain of unknown function (DUF4295) - - - 0.000000000000000005858 83.0
LYD2_k127_3814362_28 Bacterial protein of unknown function (YtfJ_HI0045) K07109 - - 0.0000000000000004014 85.0
LYD2_k127_3814362_29 Evidence 5 No homology to any previously reported sequences - - - 0.000000000006624 79.0
LYD2_k127_3814362_3 gtp-binding protein typa K06207 - - 3.313e-277 863.0
LYD2_k127_3814362_31 COGs COG5616 integral membrane protein - - - 0.0000002754 61.0
LYD2_k127_3814362_4 PFAM UDP-glucose GDP-mannose dehydrogenase K02474,K13015 - 1.1.1.136 6.884e-275 853.0
LYD2_k127_3814362_5 mandelate racemase muconate lactonizing K08323 - 4.2.1.8 9.398e-237 737.0
LYD2_k127_3814362_6 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 561.0
LYD2_k127_3814362_7 Uncharacterized protein family UPF0004 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 507.0
LYD2_k127_3814362_8 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008377 492.0
LYD2_k127_3814362_9 of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 498.0
LYD2_k127_3815049_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.905e-306 947.0
LYD2_k127_3815049_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 499.0
LYD2_k127_3815049_10 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 287.0
LYD2_k127_3815049_11 Belongs to the glycosyl hydrolase 3 family K05349,K17641 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000026 273.0
LYD2_k127_3815049_12 Belongs to the DegT DnrJ EryC1 family - - - 0.00000001873 58.0
LYD2_k127_3815049_2 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 469.0
LYD2_k127_3815049_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 458.0
LYD2_k127_3815049_4 Cys/Met metabolism PLP-dependent enzyme K19715 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0043170,GO:0044238,GO:0071704,GO:1901576 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 446.0
LYD2_k127_3815049_5 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 422.0
LYD2_k127_3815049_6 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 346.0
LYD2_k127_3815049_7 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 330.0
LYD2_k127_3815049_8 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 328.0
LYD2_k127_3815049_9 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 297.0
LYD2_k127_3826556_0 Domain of unknown function (DUF4091) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 621.0
LYD2_k127_3826556_1 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000001854 214.0
LYD2_k127_3826556_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000002185 173.0
LYD2_k127_3826556_3 DNA polymerase alpha chain like domain - - - 0.00000000000000000000000000000000000001124 163.0
LYD2_k127_3826556_4 PFAM Glycoside hydrolase, family 20, catalytic core K12373 - 3.2.1.52 0.0000000000003414 80.0
LYD2_k127_3828293_0 Glucose inhibited division protein A K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1176.0
LYD2_k127_3828293_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 518.0
LYD2_k127_3828293_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000003354 137.0
LYD2_k127_3828293_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 410.0
LYD2_k127_3828293_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 346.0
LYD2_k127_3828293_4 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004012 265.0
LYD2_k127_3828293_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001234 267.0
LYD2_k127_3828293_6 Part of a membrane complex involved in electron transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001483 264.0
LYD2_k127_3828293_7 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000007219 209.0
LYD2_k127_3828293_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000002729 163.0
LYD2_k127_3828293_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000003101 146.0
LYD2_k127_3829453_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 1.121e-215 687.0
LYD2_k127_3829453_1 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008886 492.0
LYD2_k127_3829453_2 Putative Fe-S cluster K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 364.0
LYD2_k127_3829453_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K17999 - 1.12.1.4,1.6.5.3 0.0000000000000000000000000000000000001204 146.0
LYD2_k127_3853585_0 NADP transhydrogenase K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 605.0
LYD2_k127_3853585_1 peptidase M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 541.0
LYD2_k127_3853585_2 NAD(P)( ) transhydrogenase (AB-specific), alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 419.0
LYD2_k127_3853585_3 Pyridine nucleotide transhydrogenase K00324 - 1.6.1.2 0.0000000000000000000000000000000003189 133.0
LYD2_k127_3883520_0 bacterial-type flagellum-dependent cell motility - - - 7.399e-277 864.0
LYD2_k127_3883520_1 Domain of unknown function (DUF4091) - - - 6.237e-273 850.0
LYD2_k127_3883520_10 Domain of unknown function (DUF5107) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003613 277.0
LYD2_k127_3883520_11 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002832 271.0
LYD2_k127_3883520_12 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000001177 214.0
LYD2_k127_3883520_13 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000001566 179.0
LYD2_k127_3883520_15 Amidohydrolase K07045 - - 0.000000000000000000000002661 114.0
LYD2_k127_3883520_2 GMC oxidoreductase - - - 3.035e-216 683.0
LYD2_k127_3883520_3 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 4.879e-194 619.0
LYD2_k127_3883520_4 Enolase C-terminal domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 594.0
LYD2_k127_3883520_5 COG COG1073 Hydrolases of the alpha beta superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 590.0
LYD2_k127_3883520_6 Glycosyl hydrolase family 20, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 556.0
LYD2_k127_3883520_7 Psort location Cytoplasmic, score 8.87 K02564 - 3.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 403.0
LYD2_k127_3883520_8 Methane oxygenase PmoA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 336.0
LYD2_k127_3883520_9 COG NOG09493 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000879 290.0
LYD2_k127_3917209_0 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000008355 230.0
LYD2_k127_3917209_1 TIR domain - - - 0.00001242 49.0
LYD2_k127_4008237_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 1.589e-284 886.0
LYD2_k127_4008237_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 3.12e-230 720.0
LYD2_k127_4008237_10 - - - - 0.0000000000000000000000000005855 120.0
LYD2_k127_4008237_11 PFAM BlaR1 peptidase M56 - - - 0.0000000000000000000000000009318 119.0
LYD2_k127_4008237_12 - - - - 0.00000000000001394 76.0
LYD2_k127_4008237_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 503.0
LYD2_k127_4008237_3 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 313.0
LYD2_k127_4008237_4 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 323.0
LYD2_k127_4008237_5 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000007994 253.0
LYD2_k127_4008237_6 Binding-protein-dependent transport system inner membrane component K02050,K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000001501 230.0
LYD2_k127_4008237_7 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000000000000000002661 199.0
LYD2_k127_4008237_8 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000008107 178.0
LYD2_k127_4008237_9 - - - - 0.0000000000000000000000000002549 119.0
LYD2_k127_4008758_0 Pfam Glycosyl hydrolases family 2, sugar binding domain - - - 0.0 1454.0
LYD2_k127_4008758_1 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0 1197.0
LYD2_k127_4008758_10 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 547.0
LYD2_k127_4008758_11 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 407.0
LYD2_k127_4008758_12 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 373.0
LYD2_k127_4008758_13 Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 343.0
LYD2_k127_4008758_14 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 331.0
LYD2_k127_4008758_15 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000001556 226.0
LYD2_k127_4008758_16 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000001243 209.0
LYD2_k127_4008758_17 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000008192 203.0
LYD2_k127_4008758_18 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000002217 193.0
LYD2_k127_4008758_19 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000001501 149.0
LYD2_k127_4008758_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1026.0
LYD2_k127_4008758_20 Nitroreductase family - - - 0.0000000000000000000000000000000001294 141.0
LYD2_k127_4008758_21 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07291 - 2.7.8.34 0.0000000000000000000000000000003057 134.0
LYD2_k127_4008758_22 - - - - 0.0000000000000000000000000006581 122.0
LYD2_k127_4008758_23 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000001403 96.0
LYD2_k127_4008758_3 synthetase (ADP forming), alpha K01905,K22224 - 6.2.1.13 8.892e-302 940.0
LYD2_k127_4008758_4 Glycosyl hydrolase, family 15 K01178 - 3.2.1.3 3.798e-258 807.0
LYD2_k127_4008758_5 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 1.501e-245 769.0
LYD2_k127_4008758_6 Belongs to the type-B carboxylesterase lipase family K03929 - - 6.542e-241 754.0
LYD2_k127_4008758_7 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 4.776e-231 737.0
LYD2_k127_4008758_8 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 3.225e-197 634.0
LYD2_k127_4008758_9 Tat pathway signal sequence domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 569.0
LYD2_k127_4033086_0 Alpha-1,2-mannosidase - - - 3.66e-260 821.0
LYD2_k127_4033086_1 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 412.0
LYD2_k127_4033086_2 Nodulation protein S (NodS) - - - 0.0000000000000000000000000005509 123.0
LYD2_k127_4033086_3 - - - - 0.0000000000000000006304 94.0
LYD2_k127_4033086_4 TIGRFAM geranylgeranyl reductase family - - - 0.000000000004851 66.0
LYD2_k127_4062654_0 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 540.0
LYD2_k127_4062654_1 COG4206 Outer membrane cobalamin receptor protein K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 421.0
LYD2_k127_4062654_2 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 318.0
LYD2_k127_4062654_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000546 55.0
LYD2_k127_4174844_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003436 254.0
LYD2_k127_4174844_1 - - - - 0.000000000000000000000001855 107.0
LYD2_k127_4174844_2 - - - - 0.00000000004339 70.0
LYD2_k127_4225955_0 Heat shock 70 kDa protein K04043 - - 0.0 1024.0
LYD2_k127_4225955_1 SprB repeat - - - 5.692e-235 792.0
LYD2_k127_4225955_10 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 298.0
LYD2_k127_4225955_11 Endonuclease Exonuclease phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 273.0
LYD2_k127_4225955_12 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002347 271.0
LYD2_k127_4225955_13 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000001768 196.0
LYD2_k127_4225955_14 MORN repeat variant - - - 0.00000000000000000000000000000000000000000000143 174.0
LYD2_k127_4225955_15 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000001152 160.0
LYD2_k127_4225955_16 Galactose binding lectin domain - - - 0.000000000000000000000000000000000000001469 172.0
LYD2_k127_4225955_17 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000005608 145.0
LYD2_k127_4225955_18 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000006275 94.0
LYD2_k127_4225955_19 Exonuclease VII small subunit K03602 - 3.1.11.6 0.000000000000543 70.0
LYD2_k127_4225955_2 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 3.294e-201 636.0
LYD2_k127_4225955_3 GTP cyclohydrolase II K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 607.0
LYD2_k127_4225955_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 431.0
LYD2_k127_4225955_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 382.0
LYD2_k127_4225955_6 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 378.0
LYD2_k127_4225955_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 337.0
LYD2_k127_4225955_8 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 344.0
LYD2_k127_4225955_9 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 307.0
LYD2_k127_4272522_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1415.0
LYD2_k127_4272522_1 PFAM RagB SusD K21572 - - 4.988e-298 923.0
LYD2_k127_4272522_2 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 1.251e-213 687.0
LYD2_k127_4272522_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 568.0
LYD2_k127_4272522_4 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 472.0
LYD2_k127_4272522_5 mandelate racemase muconate lactonizing K18334 - 4.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005436 286.0
LYD2_k127_4272522_6 Transcriptional regulator, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002298 257.0
LYD2_k127_4272522_7 Protein of unknown function (DUF1573) - - - 0.0000000000000000724 85.0
LYD2_k127_4272522_8 spectrin binding K15502,K19947 - 1.14.13.225 0.000000000000006857 88.0
LYD2_k127_4272522_9 cellulase activity K01406,K07451,K08651,K11904 - 3.4.21.66,3.4.24.40 0.0000000007919 70.0
LYD2_k127_4292852_0 ABC transporter, ATP-binding protein K06158 - - 6.126e-235 743.0
LYD2_k127_4292852_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 600.0
LYD2_k127_4292852_10 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000005742 249.0
LYD2_k127_4292852_11 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000004041 190.0
LYD2_k127_4292852_12 Polysaccharide lyase family 4, domain II - - - 0.000000000000000000000000000000000000000000000000297 182.0
LYD2_k127_4292852_13 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000007361 169.0
LYD2_k127_4292852_14 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000001931 156.0
LYD2_k127_4292852_15 Acyl-ACP thioesterase - - - 0.00000000000000000000000000000000000005562 152.0
LYD2_k127_4292852_16 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000002253 143.0
LYD2_k127_4292852_17 - - - - 0.00000000000000000000000000000000003573 150.0
LYD2_k127_4292852_18 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.00000000000000000000000000000001531 132.0
LYD2_k127_4292852_19 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000003709 128.0
LYD2_k127_4292852_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388,K12527 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 579.0
LYD2_k127_4292852_20 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000002801 113.0
LYD2_k127_4292852_21 - - - - 0.000000000000000000000000005161 116.0
LYD2_k127_4292852_22 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.000000000000000000003563 100.0
LYD2_k127_4292852_23 - - - - 0.000000000000000000006134 96.0
LYD2_k127_4292852_24 cytochrome c K00406 - - 0.000000003374 64.0
LYD2_k127_4292852_3 IgA Peptidase M64 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 483.0
LYD2_k127_4292852_4 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 459.0
LYD2_k127_4292852_5 Mechanosensitive ion channel K16053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 328.0
LYD2_k127_4292852_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 287.0
LYD2_k127_4292852_7 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003217 277.0
LYD2_k127_4292852_8 Secretory lipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001204 280.0
LYD2_k127_4292852_9 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000001686 243.0
LYD2_k127_43024_0 Domain of unknown function (DUF3552) K18682 - - 6.834e-251 781.0
LYD2_k127_43024_1 Dipeptidase - - - 1.457e-210 668.0
LYD2_k127_43024_2 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 522.0
LYD2_k127_43024_3 NAD dependent epimerase dehydratase family K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 452.0
LYD2_k127_43024_4 UDP-N-acetylglucosamine 2-epimerase K13019 - 5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 431.0
LYD2_k127_43024_5 Peptidase, M23 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 436.0
LYD2_k127_43024_6 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 341.0
LYD2_k127_43024_7 Participates in the control of copper homeostasis K06201 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000349 248.0
LYD2_k127_43024_8 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000119 167.0
LYD2_k127_43024_9 Cell division protein ZapA K09888 - - 0.000000000000000000000000000000005498 130.0
LYD2_k127_4323474_0 PAS domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.0 1307.0
LYD2_k127_4323474_1 Peptidase, M48 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000756 421.0
LYD2_k127_4323474_10 - - - - 0.000000000000003123 76.0
LYD2_k127_4323474_11 - - - - 0.000000000000005922 79.0
LYD2_k127_4323474_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 362.0
LYD2_k127_4323474_3 TIGRFAM alpha-glucan - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 336.0
LYD2_k127_4323474_4 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 320.0
LYD2_k127_4323474_5 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000294 224.0
LYD2_k127_4323474_6 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003504 227.0
LYD2_k127_4323474_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000001197 228.0
LYD2_k127_4323474_8 - - - - 0.0000000000000000001051 94.0
LYD2_k127_4323474_9 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000001393 89.0
LYD2_k127_4344386_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.871e-261 812.0
LYD2_k127_4344386_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 397.0
LYD2_k127_4344386_10 PFAM Tetratricopeptide repeat - - - 0.00000000001249 74.0
LYD2_k127_4344386_11 - - - - 0.0002058 53.0
LYD2_k127_4344386_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 384.0
LYD2_k127_4344386_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006748 393.0
LYD2_k127_4344386_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 332.0
LYD2_k127_4344386_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 317.0
LYD2_k127_4344386_6 FES K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000669 284.0
LYD2_k127_4344386_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004086 256.0
LYD2_k127_4344386_8 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005104 259.0
LYD2_k127_4344386_9 WbqC-like protein - - - 0.0000000000000000000000000000000000000000000003347 173.0
LYD2_k127_4348397_0 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 1.491e-218 684.0
LYD2_k127_4348397_1 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 503.0
LYD2_k127_4348397_2 ACT domain protein - - - 0.0000000005485 61.0
LYD2_k127_4353510_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 441.0
LYD2_k127_4353510_1 UDP binding domain K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 301.0
LYD2_k127_4353510_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000003961 239.0
LYD2_k127_4353510_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000004175 170.0
LYD2_k127_4353510_4 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000004881 119.0
LYD2_k127_4361286_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000349 167.0
LYD2_k127_4361286_1 Penicillinase repressor - - - 0.0000000000000000000000000000000000000001054 154.0
LYD2_k127_4361286_2 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.00000000000000000000000000000000000001375 154.0
LYD2_k127_4361286_3 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000006351 66.0
LYD2_k127_4362109_0 AcrB/AcrD/AcrF family K07787 - - 0.0 2100.0
LYD2_k127_4362109_1 ABC transporter transmembrane region K06147 - - 1.249e-265 828.0
LYD2_k127_4362109_10 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001527 278.0
LYD2_k127_4362109_11 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006644 264.0
LYD2_k127_4362109_12 COG2755 Lysophospholipase L1 and related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002039 258.0
LYD2_k127_4362109_13 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004857 252.0
LYD2_k127_4362109_14 ABC transporter, transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007537 261.0
LYD2_k127_4362109_15 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000000000000000000000000000000000003807 204.0
LYD2_k127_4362109_16 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K13640 - - 0.00000000000000000000000000000000001168 140.0
LYD2_k127_4362109_17 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000004394 141.0
LYD2_k127_4362109_18 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000002953 135.0
LYD2_k127_4362109_19 - - - - 0.000000000000000000000000000001434 123.0
LYD2_k127_4362109_2 Major Facilitator Superfamily K03446 - - 1.211e-219 694.0
LYD2_k127_4362109_20 CHAT domain - - - 0.00000000000000000000000741 114.0
LYD2_k127_4362109_22 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.00000000006714 64.0
LYD2_k127_4362109_23 pyrroloquinoline quinone binding - - - 0.0000000005268 72.0
LYD2_k127_4362109_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 539.0
LYD2_k127_4362109_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 502.0
LYD2_k127_4362109_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 360.0
LYD2_k127_4362109_6 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 364.0
LYD2_k127_4362109_7 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 312.0
LYD2_k127_4362109_8 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 295.0
LYD2_k127_4362109_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 293.0
LYD2_k127_436614_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 503.0
LYD2_k127_436614_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 361.0
LYD2_k127_436614_2 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004426 290.0
LYD2_k127_436614_3 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000005647 203.0
LYD2_k127_436614_4 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000899 189.0
LYD2_k127_436614_5 Cupin domain - - - 0.0000000000000000000000000000000001373 136.0
LYD2_k127_436614_6 Transcriptional regulator, HxlR family - - - 0.0000000000000000000000000000000001793 136.0
LYD2_k127_4372773_0 Glycosyl-hydrolase 97 N-terminal K01187 - 3.2.1.20 0.0 1100.0
LYD2_k127_4372773_1 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 2.217e-239 764.0
LYD2_k127_4372773_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 456.0
LYD2_k127_4372773_3 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 445.0
LYD2_k127_4372773_4 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000007585 226.0
LYD2_k127_4372773_5 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000002497 195.0
LYD2_k127_4372773_6 Belongs to the peptidase S1 family K01310,K09615,K09628 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.1 0.0000000000000000000000000000000000000001426 172.0
LYD2_k127_4372773_7 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000000004698 151.0
LYD2_k127_4372773_8 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000002108 148.0
LYD2_k127_4372773_9 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000001737 122.0
LYD2_k127_4372832_0 IPT/TIG domain - - - 0.0000000000000000000000000000000000000000000006867 174.0
LYD2_k127_4372832_1 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000002373 121.0
LYD2_k127_4372832_2 AAA-like domain - - - 0.000000000000002495 90.0
LYD2_k127_4372832_3 Adenylate cyclase - - - 0.000000001146 72.0
LYD2_k127_4372832_4 chaperone-mediated protein folding - - - 0.0001286 55.0
LYD2_k127_4391539_0 Pfam Glycosyl transferases group 1 - - - 6.734e-219 681.0
LYD2_k127_4391539_1 Glycogen debranching enzyme - - - 1.958e-194 613.0
LYD2_k127_4391539_2 PFAM GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000001354 191.0
LYD2_k127_4391539_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000001981 150.0
LYD2_k127_4391539_4 - - - - 0.000000000000000005424 84.0
LYD2_k127_4391539_5 - - - - 0.0008996 43.0
LYD2_k127_4396969_0 Peptidase family C25 - - - 2.137e-243 792.0
LYD2_k127_4396969_1 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 419.0
LYD2_k127_4396969_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 347.0
LYD2_k127_4396969_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 284.0
LYD2_k127_4396969_4 TIGRFAM Bacteroidetes-specific - - - 0.000000001514 69.0
LYD2_k127_4439986_0 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 318.0
LYD2_k127_4439986_1 Domain of unknown function (DUF4361) - - - 0.000000000000000000000000000000000000000001217 168.0
LYD2_k127_4439986_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000001858 67.0
LYD2_k127_4450003_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1165.0
LYD2_k127_4450003_1 Psort location CytoplasmicMembrane, score K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 428.0
LYD2_k127_4450003_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000008112 192.0
LYD2_k127_4450003_3 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000000000000004223 147.0
LYD2_k127_4450003_4 - - - - 0.000003731 55.0
LYD2_k127_4455095_0 PFAM WD domain, G-beta repeat - - - 3.325e-218 717.0
LYD2_k127_4455095_1 PFAM WD domain, G-beta repeat - - - 4.157e-217 716.0
LYD2_k127_4455095_2 Metallo-beta-lactamase domain protein K02238 - - 0.00006582 50.0
LYD2_k127_446621_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 525.0
LYD2_k127_446621_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 520.0
LYD2_k127_446621_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000003029 211.0
LYD2_k127_446621_3 - - - - 0.0000002883 58.0
LYD2_k127_4472214_0 DNA topoisomerase K02622 - - 4.66e-292 906.0
LYD2_k127_4472214_1 GTP1/OBG K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 516.0
LYD2_k127_4472214_10 photosystem II stabilization - - - 0.0000000000000000000000000003738 124.0
LYD2_k127_4472214_11 Bacterial lipoate protein ligase C-terminus K03800 - 6.3.1.20 0.0000000000005289 74.0
LYD2_k127_4472214_12 - - - - 0.0000000002075 70.0
LYD2_k127_4472214_2 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 479.0
LYD2_k127_4472214_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000001463 239.0
LYD2_k127_4472214_4 Adenylate kinase K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000001724 209.0
LYD2_k127_4472214_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000006764 201.0
LYD2_k127_4472214_6 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000004945 194.0
LYD2_k127_4472214_7 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000009719 199.0
LYD2_k127_4472214_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000001747 185.0
LYD2_k127_4472214_9 Acid phosphatase homologues K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.00000000000000000000000000000000000000000007222 166.0
LYD2_k127_4473280_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 4.027e-243 771.0
LYD2_k127_4473280_1 lysine biosynthetic process via aminoadipic acid - - - 1.495e-237 755.0
LYD2_k127_4473280_10 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002283 272.0
LYD2_k127_4473280_11 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000002094 254.0
LYD2_k127_4473280_12 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000003923 237.0
LYD2_k127_4473280_13 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000341 232.0
LYD2_k127_4473280_14 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061602,GO:0070567,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902759,GO:1902760 1.1.1.328,2.7.7.76 0.000000000000000000000000000000000000000000000004565 178.0
LYD2_k127_4473280_15 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs - - - 0.0000000000000000000000000000000000002364 144.0
LYD2_k127_4473280_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000004975 76.0
LYD2_k127_4473280_17 - - - - 0.00000000001179 76.0
LYD2_k127_4473280_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 3.589e-215 682.0
LYD2_k127_4473280_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 552.0
LYD2_k127_4473280_4 ABC transporter substrate-binding component GldG K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 451.0
LYD2_k127_4473280_5 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 368.0
LYD2_k127_4473280_6 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 374.0
LYD2_k127_4473280_7 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 298.0
LYD2_k127_4473280_8 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 285.0
LYD2_k127_4473280_9 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002225 269.0
LYD2_k127_4475005_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1220.0
LYD2_k127_4475005_1 Multidrug ABC transporter ATPase K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 607.0
LYD2_k127_4475005_2 Sialate O-acetylesterase K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 542.0
LYD2_k127_4475005_3 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007527 266.0
LYD2_k127_4475005_4 Glutamyl-tRNA amidotransferase K09117 - - 0.00000000000000000000000000000000000000005547 155.0
LYD2_k127_4475005_5 Membrane - - - 0.00000000000000000000005303 103.0
LYD2_k127_4475005_6 Haem-binding domain - - - 0.0000002264 57.0
LYD2_k127_4476122_0 ATP synthesis coupled electron transport K00336 - 1.6.5.3 1.784e-301 949.0
LYD2_k127_4476122_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 1.797e-277 862.0
LYD2_k127_4476122_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 311.0
LYD2_k127_4476122_11 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 320.0
LYD2_k127_4476122_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 295.0
LYD2_k127_4476122_13 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002791 244.0
LYD2_k127_4476122_14 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000004563 217.0
LYD2_k127_4476122_15 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000001471 215.0
LYD2_k127_4476122_16 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000872 193.0
LYD2_k127_4476122_17 nicotinamide mononucleotide transporter K03811 - - 0.000000000000000000000000000000000000000000000000000113 193.0
LYD2_k127_4476122_18 NADH ubiquinone oxidoreductase subunit 6 (chain J) K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000007474 171.0
LYD2_k127_4476122_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000002178 162.0
LYD2_k127_4476122_2 TonB-dependent receptor plug domain K02014 - - 6.435e-255 809.0
LYD2_k127_4476122_20 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000002815 125.0
LYD2_k127_4476122_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000001001 121.0
LYD2_k127_4476122_22 - - - - 0.00000000001345 69.0
LYD2_k127_4476122_3 Transport of potassium into the cell K03549 - - 7.832e-229 725.0
LYD2_k127_4476122_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 8.897e-227 718.0
LYD2_k127_4476122_5 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.95e-214 682.0
LYD2_k127_4476122_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.365e-200 631.0
LYD2_k127_4476122_7 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 565.0
LYD2_k127_4476122_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 469.0
LYD2_k127_4476122_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 400.0
LYD2_k127_4482215_0 Rifampin ADP-ribosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 436.0
LYD2_k127_4482215_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 353.0
LYD2_k127_4482215_2 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 308.0
LYD2_k127_4482215_3 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 285.0
LYD2_k127_4482215_4 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000004551 180.0
LYD2_k127_4483532_0 PFAM Peptidase M16 inactive domain K07263 - - 7.745e-224 711.0
LYD2_k127_4483532_1 Major Facilitator Superfamily K03535 - - 2.722e-215 674.0
LYD2_k127_4483532_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000003057 72.0
LYD2_k127_4483532_3 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000007517 48.0
LYD2_k127_4484391_0 SMART zinc finger, CDGSH-type domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 352.0
LYD2_k127_4484391_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 342.0
LYD2_k127_4484391_2 hydrolase, family 3 K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000001348 203.0
LYD2_k127_4486607_0 PIN domain K07175 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 590.0
LYD2_k127_4486607_1 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 471.0
LYD2_k127_4486607_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006818 404.0
LYD2_k127_4486607_3 glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 321.0
LYD2_k127_4486607_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 293.0
LYD2_k127_4486607_5 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001532 280.0
LYD2_k127_4486607_6 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000463 186.0
LYD2_k127_4489290_0 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 399.0
LYD2_k127_4489290_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 382.0
LYD2_k127_4489290_2 Ndr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 332.0
LYD2_k127_4489290_3 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 301.0
LYD2_k127_4489290_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000001706 214.0
LYD2_k127_4489290_5 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000007172 171.0
LYD2_k127_4489290_6 Domain of Unknown Function (DUF748) - - - 0.0000000000004067 81.0
LYD2_k127_4489290_7 PKD domain containing protein - - - 0.00006442 54.0
LYD2_k127_4490889_0 serine-type peptidase activity K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 493.0
LYD2_k127_4490889_1 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 441.0
LYD2_k127_4490889_2 His Kinase A (phosphoacceptor) domain K02484,K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 424.0
LYD2_k127_4490889_3 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 397.0
LYD2_k127_4490889_4 His Kinase A (phosphoacceptor) domain K02484,K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 337.0
LYD2_k127_4490889_5 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000573 275.0
LYD2_k127_4490889_6 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001449 245.0
LYD2_k127_4490889_7 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000005855 187.0
LYD2_k127_4490889_8 Transposase K07491 - - 0.000000000000000000000000000000000000000004344 159.0
LYD2_k127_4493981_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 1.488e-223 707.0
LYD2_k127_4493981_1 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 599.0
LYD2_k127_4493981_2 Putative Fe-S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 567.0
LYD2_k127_4493981_3 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 482.0
LYD2_k127_4493981_4 Ser Thr phosphatase family protein K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000002538 250.0
LYD2_k127_4493981_5 Nudix hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000009045 144.0
LYD2_k127_4493981_6 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000003245 143.0
LYD2_k127_4493981_7 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K17999 - 1.12.1.4,1.6.5.3 0.00000000000000000005969 91.0
LYD2_k127_4493981_8 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.0000000000000001978 81.0
LYD2_k127_4509070_0 PFAM PP-loop domain protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 302.0
LYD2_k127_4509070_1 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 287.0
LYD2_k127_4509070_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001252 263.0
LYD2_k127_4509070_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000009023 195.0
LYD2_k127_4509070_4 DJ-1/PfpI family K03152 - 3.5.1.124 0.00000001604 63.0
LYD2_k127_4509070_5 membrane - - - 0.0000002587 63.0
LYD2_k127_4509733_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 336.0
LYD2_k127_4509733_1 Peptidase S9 prolyl oligopeptidase active site K01281 - 3.4.14.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006067 286.0
LYD2_k127_4509733_2 peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000000000000002747 137.0
LYD2_k127_4509733_3 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000003519 111.0
LYD2_k127_4509733_4 Cupin domain - - - 0.000001371 51.0
LYD2_k127_4513405_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0 1099.0
LYD2_k127_4513405_1 Peptidase family M28 - - - 2.615e-222 700.0
LYD2_k127_4513405_10 6-pyruvoyl tetrahydrobiopterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000008662 194.0
LYD2_k127_4513405_11 PFAM UBA THIF-type NAD FAD binding protein K03148 - 2.7.7.73 0.0000000000000000000000000000000000000000000000008034 181.0
LYD2_k127_4513405_12 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000004781 143.0
LYD2_k127_4513405_13 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000001697 131.0
LYD2_k127_4513405_14 Septum formation initiator - - - 0.00000000000000000004086 93.0
LYD2_k127_4513405_15 - - - - 0.00000000000001712 82.0
LYD2_k127_4513405_16 protein conserved in bacteria - - - 0.00000000000002643 75.0
LYD2_k127_4513405_17 ThiS family K03149,K03154 - 2.8.1.10 0.000006379 50.0
LYD2_k127_4513405_2 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 407.0
LYD2_k127_4513405_3 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 344.0
LYD2_k127_4513405_4 Iron/manganese superoxide dismutases, alpha-hairpin domain K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 301.0
LYD2_k127_4513405_5 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 297.0
LYD2_k127_4513405_6 Pfam Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001259 292.0
LYD2_k127_4513405_7 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006864 266.0
LYD2_k127_4513405_8 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005553 233.0
LYD2_k127_4513405_9 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000113 224.0
LYD2_k127_4523316_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 499.0
LYD2_k127_4523316_1 Belongs to the glycosyl hydrolase 13 family K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 383.0
LYD2_k127_4523316_2 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 304.0
LYD2_k127_4523480_0 Glycosyl hydrolases family 35 K12308 - 3.2.1.23 7.407e-277 862.0
LYD2_k127_4523480_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 1.279e-259 805.0
LYD2_k127_4523480_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 416.0
LYD2_k127_4523480_11 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 381.0
LYD2_k127_4523480_12 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 377.0
LYD2_k127_4523480_13 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 357.0
LYD2_k127_4523480_14 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 299.0
LYD2_k127_4523480_15 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000001059 213.0
LYD2_k127_4523480_16 K11085 ATP-binding cassette, subfamily B, bacterial MsbA K11085 - - 0.0000000000000000000000000000000000000000001111 160.0
LYD2_k127_4523480_17 spectrin binding K15502,K15503 - - 0.00000000000000000000000000000004942 141.0
LYD2_k127_4523480_18 Subtilase family - - - 0.0001772 55.0
LYD2_k127_4523480_2 Glucuronate isomerase K01812 - 5.3.1.12 2.678e-219 688.0
LYD2_k127_4523480_3 Domain of unknown function (DUF2088) - - - 6.715e-201 632.0
LYD2_k127_4523480_4 Belongs to the glycosyl hydrolase 43 family K22350 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 582.0
LYD2_k127_4523480_5 tagaturonate epimerase K21619 - 5.1.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 524.0
LYD2_k127_4523480_6 transmembrane transporter activity K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 520.0
LYD2_k127_4523480_7 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 447.0
LYD2_k127_4523480_8 KR domain K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 432.0
LYD2_k127_4523480_9 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 426.0
LYD2_k127_4531507_0 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 416.0
LYD2_k127_4531507_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001503 195.0
LYD2_k127_4531507_2 AAA-like domain - - - 0.00000000000009874 83.0
LYD2_k127_4531507_3 aspartate kinase activity - - - 0.0001084 54.0
LYD2_k127_4538910_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 1.638e-244 770.0
LYD2_k127_4538910_1 Psort location CytoplasmicMembrane, score 10.00 K12343 - 1.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000004206 268.0
LYD2_k127_4539352_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 4.699e-297 925.0
LYD2_k127_4539352_1 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.0000000000000000000000000000000000000000000003406 174.0
LYD2_k127_4539352_2 TPR repeat-containing protein - - - 0.000000000000000000000003512 112.0
LYD2_k127_4542454_0 the aldose L-fucose into the corresponding ketose L-fuculose K01818 - 5.3.1.25,5.3.1.3 8.262e-285 886.0
LYD2_k127_4542454_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 2.209e-213 676.0
LYD2_k127_4542454_2 Carbohydrate kinase, FGGY family protein K00848,K00879 GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 2.7.1.5,2.7.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 502.0
LYD2_k127_4542454_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 477.0
LYD2_k127_4542454_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 378.0
LYD2_k127_4542454_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 289.0
LYD2_k127_4542454_6 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000007636 256.0
LYD2_k127_4542454_7 Amino-transferase class IV K00824,K00826 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21,2.6.1.42 0.0000000000000000000000000000000000000000000000000000000002522 210.0
LYD2_k127_4542454_8 - - - - 0.000000000001948 76.0
LYD2_k127_4552308_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 7.749e-256 797.0
LYD2_k127_4552308_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000002042 110.0
LYD2_k127_4565623_0 PFAM Cation efflux - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 335.0
LYD2_k127_4565623_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000001859 198.0
LYD2_k127_4565623_2 Tetratricopeptide repeat - - - 0.00000000000000000002954 105.0
LYD2_k127_4565623_3 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - 0.00000000000000178 78.0
LYD2_k127_4565623_4 Endonuclease containing a URI domain K07461 - - 0.000000000004183 69.0
LYD2_k127_4565623_5 COGs COG5616 integral membrane protein - - - 0.00000007383 58.0
LYD2_k127_4566324_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000006305 244.0
LYD2_k127_4566324_1 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000072 190.0
LYD2_k127_4566324_2 OmpA family K03286 - - 0.0000000001006 62.0
LYD2_k127_4566464_0 Mannitol dehydrogenase C-terminal domain K00009,K00040,K00041,K00045 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.1.1.17,1.1.1.57,1.1.1.58,1.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 502.0
LYD2_k127_4566464_1 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 374.0
LYD2_k127_4566464_10 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000000006094 199.0
LYD2_k127_4566464_11 CotH kinase protein K06330 - - 0.0000000000000000000000000000000000000000000004281 183.0
LYD2_k127_4566464_12 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000007682 159.0
LYD2_k127_4566464_13 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K01919,K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 6.3.2.2 0.000000000000000000000000323 115.0
LYD2_k127_4566464_14 Protein of unknown function (DUF3795) - - - 0.000000002702 59.0
LYD2_k127_4566464_2 fructose-bisphosphate aldolase activity K01624,K08302 - 4.1.2.13,4.1.2.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 350.0
LYD2_k127_4566464_3 PFAM carbohydrate kinase K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 353.0
LYD2_k127_4566464_4 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 340.0
LYD2_k127_4566464_5 Pfam:DUF1498 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 293.0
LYD2_k127_4566464_6 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008908 261.0
LYD2_k127_4566464_7 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000000000001517 233.0
LYD2_k127_4566464_8 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000225 213.0
LYD2_k127_4566464_9 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000503 210.0
LYD2_k127_4567115_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 2.142e-196 620.0
LYD2_k127_4567115_1 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 575.0
LYD2_k127_4567115_2 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 431.0
LYD2_k127_4567115_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 361.0
LYD2_k127_4567115_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 364.0
LYD2_k127_4567115_5 - - - - 0.0000000000000000000000000000000000000000000000000000000009639 214.0
LYD2_k127_4567115_6 Transposase - - - 0.00000000000000000000000000000000000000000000000003756 190.0
LYD2_k127_4567115_7 MerR HTH family regulatory protein - - - 0.000000000000000000000000000005283 121.0
LYD2_k127_4567115_8 phosphorelay signal transduction system - - - 0.0003132 49.0
LYD2_k127_4573119_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 344.0
LYD2_k127_4576420_0 TonB-dependent receptor plug - - - 0.0 1132.0
LYD2_k127_4576420_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.237e-279 867.0
LYD2_k127_4576420_2 NapC/NirT cytochrome c family, N-terminal region - - - 1.254e-202 642.0
LYD2_k127_4576420_3 PFAM RagB SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 580.0
LYD2_k127_4576420_4 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K01250 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 314.0
LYD2_k127_4576420_5 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 293.0
LYD2_k127_4576420_6 Putative esterase - - - 0.000000000000000000000000000000001241 132.0
LYD2_k127_4576420_7 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000001662 128.0
LYD2_k127_4648706_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 503.0
LYD2_k127_4648706_1 amino acid peptide transporter K03305 - - 0.000000000000000000000000000000000000000000000000000002579 194.0
LYD2_k127_4648706_2 amino acid peptide transporter K03305 - - 0.0000000000000000000000000000001067 128.0
LYD2_k127_4648706_3 Domain of unknown function (DUF4831) - - - 0.0000000000000007162 88.0
LYD2_k127_4671064_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 2.252e-202 642.0
LYD2_k127_4671064_1 membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 545.0
LYD2_k127_4671064_10 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.000000000000000000000000000000000000000000000000002041 185.0
LYD2_k127_4671064_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000007854 181.0
LYD2_k127_4671064_12 - - - - 0.000000000000000000000000000000000004976 145.0
LYD2_k127_4671064_13 50S ribosome-binding GTPase - - - 0.0000000000000000000000006362 105.0
LYD2_k127_4671064_14 COG NOG17489 non supervised orthologous group - - - 0.00000000001811 66.0
LYD2_k127_4671064_2 Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 499.0
LYD2_k127_4671064_3 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 460.0
LYD2_k127_4671064_4 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 385.0
LYD2_k127_4671064_5 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 336.0
LYD2_k127_4671064_6 Glutamine cyclotransferase K00683 - 2.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 306.0
LYD2_k127_4671064_7 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001601 292.0
LYD2_k127_4671064_8 diacylglycerol kinase, catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
LYD2_k127_4671064_9 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000004605 243.0
LYD2_k127_4702281_0 X-Pro dipeptidyl-peptidase (S15 family) - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 8.008e-213 681.0
LYD2_k127_4702281_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 537.0
LYD2_k127_4702281_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 387.0
LYD2_k127_4702281_3 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000002671 220.0
LYD2_k127_4702281_4 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000006051 190.0
LYD2_k127_4702281_5 transposase activity - - - 0.000000000000000000000000000000000000000000003584 171.0
LYD2_k127_4702281_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000004016 153.0
LYD2_k127_4702281_7 Belongs to the ClpS family K06891 - - 0.0000000000000000001416 91.0
LYD2_k127_4702281_8 nuclear chromosome segregation - - - 0.00000000000006916 85.0
LYD2_k127_4702281_9 Yip1 domain - - - 0.0000002742 59.0
LYD2_k127_4709314_0 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 291.0
LYD2_k127_4709314_1 negative regulation of superoxide anion generation K14379 GO:0000323,GO:0001101,GO:0001501,GO:0001503,GO:0001505,GO:0001817,GO:0001818,GO:0001894,GO:0002237,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0003993,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0007162,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0008198,GO:0008199,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009743,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0014070,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0019222,GO:0030097,GO:0030099,GO:0030154,GO:0030155,GO:0030316,GO:0030334,GO:0030335,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031348,GO:0031667,GO:0032101,GO:0032102,GO:0032496,GO:0032501,GO:0032502,GO:0032651,GO:0032652,GO:0032655,GO:0032680,GO:0032691,GO:0032692,GO:0032695,GO:0032720,GO:0032879,GO:0032928,GO:0032929,GO:0033273,GO:0033555,GO:0033591,GO:0033993,GO:0034097,GO:0034284,GO:0034641,GO:0036314,GO:0040012,GO:0040017,GO:0042221,GO:0042578,GO:0042592,GO:0042726,GO:0042742,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044281,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045019,GO:0045428,GO:0045453,GO:0046483,GO:0046849,GO:0046872,GO:0046914,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048705,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0048871,GO:0050727,GO:0050728,GO:0050789,GO:0050794,GO:0050830,GO:0050896,GO:0051171,GO:0051172,GO:0051239,GO:0051241,GO:0051270,GO:0051272,GO:0051704,GO:0051707,GO:0060249,GO:0060348,GO:0060349,GO:0065007,GO:0065008,GO:0070723,GO:0071704,GO:0080134,GO:0090322,GO:0097305,GO:0098542,GO:1901360,GO:1901564,GO:1901700,GO:1903426,GO:1903427,GO:1903555,GO:1903556,GO:1904406,GO:2000145,GO:2000147,GO:2000377,GO:2000378 3.1.3.2 0.00000000001602 77.0
LYD2_k127_4710475_0 DNA Topoisomerase IV K02621 - - 6.514e-232 731.0
LYD2_k127_4710475_1 BPG-independent PGAM N-terminus (iPGM_N) K15633 - 5.4.2.12 2.88e-223 700.0
LYD2_k127_4710475_2 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 633.0
LYD2_k127_4710475_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000002211 155.0
LYD2_k127_4710475_4 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0000009165 62.0
LYD2_k127_4738917_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 352.0
LYD2_k127_4738917_1 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000002989 197.0
LYD2_k127_4738917_2 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000007533 184.0
LYD2_k127_4738917_3 - - - - 0.00000000000000000006103 93.0
LYD2_k127_4757068_0 Sulfatase-modifying factor enzyme 1 - - - 6.746e-255 809.0
LYD2_k127_4757068_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 6.306e-233 728.0
LYD2_k127_4757068_2 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 329.0
LYD2_k127_4757068_3 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 302.0
LYD2_k127_4757068_4 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000003025 199.0
LYD2_k127_4758004_0 Tat pathway signal sequence domain protein - - - 7.365e-245 767.0
LYD2_k127_4758004_1 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 489.0
LYD2_k127_4758004_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 345.0
LYD2_k127_4758004_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 336.0
LYD2_k127_4758004_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 289.0
LYD2_k127_4758004_5 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 295.0
LYD2_k127_4768007_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1238.0
LYD2_k127_4768007_1 Putative oxidoreductase C terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 571.0
LYD2_k127_4768007_10 TIR domain - - - 0.0000005062 57.0
LYD2_k127_4768007_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 337.0
LYD2_k127_4768007_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005217 269.0
LYD2_k127_4768007_4 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001494 249.0
LYD2_k127_4768007_5 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000208 211.0
LYD2_k127_4768007_6 Domain of unknown function (DUF4294) - - - 0.000000000000000000000000000000000000001803 156.0
LYD2_k127_4768007_7 2'-5' RNA ligase superfamily K01975 - 3.1.4.58 0.0000000000000000000000000000000000000495 149.0
LYD2_k127_4768007_8 - - - - 0.00000000000000000000000000002237 134.0
LYD2_k127_4768007_9 Putative zincin peptidase - - - 0.00000000000000002928 90.0
LYD2_k127_4772370_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.96e-294 924.0
LYD2_k127_4772370_1 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 525.0
LYD2_k127_4772370_10 Guanylate kinase homologues. K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000003556 222.0
LYD2_k127_4772370_11 Protein of unknown function (DUF3078) - - - 0.0000000000000000000000000000000000000000000000000000003246 213.0
LYD2_k127_4772370_12 4Fe-4S binding domain protein K00176 - 1.2.7.3 0.000000000000000000000000000103 116.0
LYD2_k127_4772370_13 - - - - 0.00000000000004212 76.0
LYD2_k127_4772370_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 414.0
LYD2_k127_4772370_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 390.0
LYD2_k127_4772370_4 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 328.0
LYD2_k127_4772370_5 TIGR00255 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 316.0
LYD2_k127_4772370_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 302.0
LYD2_k127_4772370_7 2-oxoacid ferredoxin flavodoxin oxidoreductase, gamma subunit K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008209 295.0
LYD2_k127_4772370_8 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000002078 230.0
LYD2_k127_4772370_9 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000003482 225.0
LYD2_k127_4789189_0 Glucosamine-6-phosphate isomerase K02564 - 3.5.99.6 5e-323 1005.0
LYD2_k127_4789189_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 3.665e-243 759.0
LYD2_k127_4789189_10 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000001355 158.0
LYD2_k127_4789189_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000002653 130.0
LYD2_k127_4789189_2 Oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 596.0
LYD2_k127_4789189_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 526.0
LYD2_k127_4789189_4 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 509.0
LYD2_k127_4789189_5 transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086 479.0
LYD2_k127_4789189_6 Belongs to the MIP aquaporin (TC 1.A.8) family K02440,K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 315.0
LYD2_k127_4789189_7 PFAM Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002321 266.0
LYD2_k127_4789189_8 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000003014 248.0
LYD2_k127_4789189_9 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000005982 169.0
LYD2_k127_4819375_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 9.922e-271 839.0
LYD2_k127_4819375_1 Sugar (and other) transporter K02100 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 402.0
LYD2_k127_4819375_10 Redoxin family - - - 0.00000000000000000000000000000000000000000002016 166.0
LYD2_k127_4819375_11 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000000000001507 129.0
LYD2_k127_4819375_12 Two component regulator propeller - - - 0.000000000000000989 89.0
LYD2_k127_4819375_13 polysaccharide deacetylase - - - 0.000000000001815 71.0
LYD2_k127_4819375_14 - - - - 0.00000002487 66.0
LYD2_k127_4819375_15 - - - - 0.00000005233 59.0
LYD2_k127_4819375_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 371.0
LYD2_k127_4819375_3 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 339.0
LYD2_k127_4819375_4 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 336.0
LYD2_k127_4819375_5 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 301.0
LYD2_k127_4819375_6 IPT/TIG domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009833 268.0
LYD2_k127_4819375_7 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000002062 265.0
LYD2_k127_4819375_8 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000812 259.0
LYD2_k127_4819375_9 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000001254 202.0
LYD2_k127_4851113_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0 1308.0
LYD2_k127_4851113_1 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 6.962e-286 897.0
LYD2_k127_4851113_10 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 411.0
LYD2_k127_4851113_11 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 338.0
LYD2_k127_4851113_12 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 330.0
LYD2_k127_4851113_13 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 316.0
LYD2_k127_4851113_14 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
LYD2_k127_4851113_15 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 316.0
LYD2_k127_4851113_16 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 306.0
LYD2_k127_4851113_17 transcriptional regulator (AraC family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006004 267.0
LYD2_k127_4851113_18 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004848 269.0
LYD2_k127_4851113_19 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000004412 259.0
LYD2_k127_4851113_2 TonB-dependent receptor - - - 4.051e-280 892.0
LYD2_k127_4851113_20 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004474 258.0
LYD2_k127_4851113_21 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001079 249.0
LYD2_k127_4851113_22 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002211 240.0
LYD2_k127_4851113_24 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000232 207.0
LYD2_k127_4851113_25 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000001003 195.0
LYD2_k127_4851113_26 cyclic nucleotide binding K01420,K10914,K21556,K21562 - - 0.000000000000000000000000000000000000003286 154.0
LYD2_k127_4851113_27 Ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000000000863 143.0
LYD2_k127_4851113_28 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000008832 123.0
LYD2_k127_4851113_29 - - - - 0.00000000000000000006108 103.0
LYD2_k127_4851113_3 Cytochrome C assembly protein - - - 5.541e-233 756.0
LYD2_k127_4851113_30 Cytochrome c - - - 0.0000000002941 66.0
LYD2_k127_4851113_32 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000003848 58.0
LYD2_k127_4851113_4 protein conserved in bacteria - - - 3.62e-215 688.0
LYD2_k127_4851113_5 acyl-CoA dehydrogenase - - - 8.602e-206 655.0
LYD2_k127_4851113_6 PFAM RagB SusD domain protein K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 569.0
LYD2_k127_4851113_7 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 542.0
LYD2_k127_4851113_8 Domain of unknown function (DUF362) K07138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 533.0
LYD2_k127_4851113_9 lactate metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 546.0
LYD2_k127_4884313_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 522.0
LYD2_k127_4896671_0 DNA helicase K03657 - 3.6.4.12 1.275e-203 656.0
LYD2_k127_4896671_1 beta-galactosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 520.0
LYD2_k127_4896671_2 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 462.0
LYD2_k127_4896671_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 366.0
LYD2_k127_4896671_4 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 327.0
LYD2_k127_4896671_5 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 308.0
LYD2_k127_4896671_6 SprB repeat - - - 0.00000000000000000000000000000000009023 144.0
LYD2_k127_4896671_7 AraC-like ligand binding domain - - - 0.00000000000000000000003104 102.0
LYD2_k127_4896671_8 - - - - 0.000000000004243 68.0
LYD2_k127_4907153_0 signal peptide peptidase SppA, 67K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 512.0
LYD2_k127_4907153_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 342.0
LYD2_k127_4907153_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007935 284.0
LYD2_k127_4907153_3 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000007751 188.0
LYD2_k127_4907153_4 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000001541 156.0
LYD2_k127_4907153_5 RadC-like JAB domain K03630 - - 0.000000000000472 69.0
LYD2_k127_4907153_6 Lamin Tail Domain - - - 0.00000001231 59.0
LYD2_k127_4925584_0 Putative Fe-S cluster K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 340.0
LYD2_k127_4925584_1 response regulator, receiver K07814 - - 0.000000000000000000000000000000000002143 141.0
LYD2_k127_4925584_2 protein histidine kinase activity K02484,K07636 - 2.7.13.3 0.00000000000000000000000000001092 121.0
LYD2_k127_4928645_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 2.55e-316 984.0
LYD2_k127_4928645_1 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 550.0
LYD2_k127_4928645_2 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 522.0
LYD2_k127_4928645_3 Trehalose utilisation K09992 - - 0.000000001255 62.0
LYD2_k127_4937849_0 Translation-initiation factor 2 K02519 - - 0.0 1135.0
LYD2_k127_4937849_1 phosphorylase K00691 - 2.4.1.8 6.325e-311 970.0
LYD2_k127_4937849_10 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000000001232 194.0
LYD2_k127_4937849_11 - - - - 0.000000000000000000000000000000000000001729 150.0
LYD2_k127_4937849_12 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000002564 128.0
LYD2_k127_4937849_2 Participates in both transcription termination and antitermination K02600 - - 2.295e-216 677.0
LYD2_k127_4937849_3 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 5.482e-204 652.0
LYD2_k127_4937849_4 Transporter, major facilitator family protein K16211 - - 2.52e-197 627.0
LYD2_k127_4937849_5 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 556.0
LYD2_k127_4937849_6 Alpha amylase, C-terminal all-beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 476.0
LYD2_k127_4937849_7 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000004653 267.0
LYD2_k127_4937849_8 PFAM Haloacid dehalogenase domain protein hydrolase K01838 - 5.4.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000008713 259.0
LYD2_k127_4937849_9 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001076 242.0
LYD2_k127_4998209_0 cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 4.42e-208 666.0
LYD2_k127_4998209_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 426.0
LYD2_k127_4998209_10 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000787 233.0
LYD2_k127_4998209_11 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000003817 216.0
LYD2_k127_4998209_12 Ribosomal L25p family K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000003207 190.0
LYD2_k127_4998209_13 Putative serine esterase (DUF676) - - - 0.00000000000000000000000000000000000000000000419 171.0
LYD2_k127_4998209_14 S4 RNA-binding domain K04762 - - 0.000000000000000000000000000000000156 136.0
LYD2_k127_4998209_15 - - - - 0.00000000000000000000925 104.0
LYD2_k127_4998209_16 MORN repeat variant - - - 0.000000002279 68.0
LYD2_k127_4998209_2 Membrane dipeptidase (Peptidase family M19) K01273,K01274 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 425.0
LYD2_k127_4998209_3 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 409.0
LYD2_k127_4998209_4 mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 391.0
LYD2_k127_4998209_5 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 329.0
LYD2_k127_4998209_6 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 294.0
LYD2_k127_4998209_7 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 293.0
LYD2_k127_4998209_8 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003872 263.0
LYD2_k127_4998209_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000003402 257.0
LYD2_k127_5005230_0 lysine biosynthetic process via aminoadipic acid - - - 4.24e-297 935.0
LYD2_k127_5005230_1 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 364.0
LYD2_k127_5005230_2 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006771 320.0
LYD2_k127_5005230_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000729 228.0
LYD2_k127_5005230_4 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000001792 220.0
LYD2_k127_5005230_5 YbaK proline--tRNA ligase associated domain protein K19055 - - 0.00000000000000000000000000000000000000000000000000000000001221 211.0
LYD2_k127_5060947_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 2074.0
LYD2_k127_5060947_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1733.0
LYD2_k127_5060947_10 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 303.0
LYD2_k127_5060947_11 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000899 261.0
LYD2_k127_5060947_12 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003619 255.0
LYD2_k127_5060947_13 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000921 237.0
LYD2_k127_5060947_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000008809 226.0
LYD2_k127_5060947_15 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000004195 214.0
LYD2_k127_5060947_16 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001165 208.0
LYD2_k127_5060947_17 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000164 200.0
LYD2_k127_5060947_18 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000011 181.0
LYD2_k127_5060947_19 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000008356 127.0
LYD2_k127_5060947_2 Phosphoesterase family - - - 0.0 1059.0
LYD2_k127_5060947_20 Domain of unknown function (DUF3127) - - - 0.00000000000000000000000000001864 121.0
LYD2_k127_5060947_21 Alpha-L-fucosidase K01206 - 3.2.1.51 0.00008123 52.0
LYD2_k127_5060947_3 Belongs to the transketolase family K00615 - 2.2.1.1 2.114e-272 848.0
LYD2_k127_5060947_4 peptidase K01284,K01414 - 3.4.15.5,3.4.24.70 2.321e-251 792.0
LYD2_k127_5060947_5 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 561.0
LYD2_k127_5060947_6 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 543.0
LYD2_k127_5060947_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004627 478.0
LYD2_k127_5060947_8 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 383.0
LYD2_k127_5060947_9 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 362.0
LYD2_k127_5094433_0 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005222 280.0
LYD2_k127_5094433_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000002777 115.0
LYD2_k127_5094433_2 Receptor - - - 0.000000000000000007878 98.0
LYD2_k127_5094704_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.476e-203 649.0
LYD2_k127_5094704_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 538.0
LYD2_k127_5094704_10 Transport permease protein K01992 - - 0.000000000000001264 78.0
LYD2_k127_5094704_2 NADH dehydrogenase K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 424.0
LYD2_k127_5094704_3 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 392.0
LYD2_k127_5094704_4 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 351.0
LYD2_k127_5094704_5 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 314.0
LYD2_k127_5094704_6 Peptidase, S54 family K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 286.0
LYD2_k127_5094704_7 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003251 268.0
LYD2_k127_5094704_8 endonuclease exonuclease phosphatase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009278 264.0
LYD2_k127_5094704_9 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000001609 233.0
LYD2_k127_5099089_0 AdoMet dependent proline di-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 306.0
LYD2_k127_5099089_1 Creatinine amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000001055 219.0
LYD2_k127_5099089_2 Fibronectin type 3 domain K21571 - - 0.000000000000000000000000000000000000000000000000000000000009398 219.0
LYD2_k127_5099089_3 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000001292 185.0
LYD2_k127_5099089_5 - - - - 0.000000000000000000006285 93.0
LYD2_k127_510300_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 369.0
LYD2_k127_510300_1 Putative esterase K07017 - - 0.00000000000000000000000000000000000373 148.0
LYD2_k127_510300_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000002515 51.0
LYD2_k127_5108084_0 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - 0.0 1384.0
LYD2_k127_5108084_1 SusD family K21572 - - 6.423e-241 758.0
LYD2_k127_5108084_2 alpha-galactosidase - - - 1.144e-228 726.0
LYD2_k127_5108084_3 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 3.454e-207 655.0
LYD2_k127_5108084_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 546.0
LYD2_k127_5108084_5 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005078 281.0
LYD2_k127_5113368_0 - - - - 0.0000000000000000000000000000000000000000000000001186 188.0
LYD2_k127_5113368_1 - - - - 0.000000000000000000001365 103.0
LYD2_k127_5113368_2 - - - - 0.000000000000007021 83.0
LYD2_k127_5113368_3 AAA-like domain - - - 0.00000000003117 66.0
LYD2_k127_5113368_4 Metallo-beta-lactamase domain protein K02238 - - 0.0003329 49.0
LYD2_k127_5113489_0 ATPase (AAA superfamily K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 465.0
LYD2_k127_5113489_1 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.00000000000000000000000008969 117.0
LYD2_k127_5115088_0 acetoacetate metabolism regulatory protein AtoC K07714 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 574.0
LYD2_k127_5115088_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 501.0
LYD2_k127_5116136_0 Concanavalin A-like lectin/glucanases superfamily K01190 - 3.2.1.23 0.0 1545.0
LYD2_k127_5116136_1 Insulinase (Peptidase family M16) K07263 - - 0.0 1030.0
LYD2_k127_5116136_10 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 488.0
LYD2_k127_5116136_11 Psort location Cytoplasmic, score 9.26 K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 455.0
LYD2_k127_5116136_12 Belongs to the aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 441.0
LYD2_k127_5116136_13 Trehalose utilisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 410.0
LYD2_k127_5116136_14 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002228 276.0
LYD2_k127_5116136_15 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001533 276.0
LYD2_k127_5116136_16 HlyD membrane-fusion protein of T1SS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002394 277.0
LYD2_k127_5116136_17 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001462 254.0
LYD2_k127_5116136_18 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000003792 166.0
LYD2_k127_5116136_2 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 2.849e-288 908.0
LYD2_k127_5116136_20 PFAM Bacterial protein of - - - 0.000000000000000002553 92.0
LYD2_k127_5116136_21 - - - - 0.0009716 48.0
LYD2_k127_5116136_22 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0009967 46.0
LYD2_k127_5116136_3 Peptidase M1 - - - 2e-248 777.0
LYD2_k127_5116136_4 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 5.896e-219 688.0
LYD2_k127_5116136_5 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs - - - 6.846e-207 657.0
LYD2_k127_5116136_6 Putative modulator of DNA gyrase K03568 - - 4.968e-199 631.0
LYD2_k127_5116136_7 GMC oxidoreductase K03333 - 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 588.0
LYD2_k127_5116136_8 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 588.0
LYD2_k127_5116136_9 CotH kinase protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 577.0
LYD2_k127_5118682_0 Oxidoreductase - - - 1.915e-283 875.0
LYD2_k127_5118682_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.158e-264 824.0
LYD2_k127_5118682_10 Aminotransferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000002837 222.0
LYD2_k127_5118682_11 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000001407 170.0
LYD2_k127_5118682_12 CHAT domain - - - 0.000000000000000000000001217 116.0
LYD2_k127_5118682_13 - - - - 0.000000000002988 70.0
LYD2_k127_5118682_14 Wd40 repeat-containing protein K12132 - 2.7.11.1 0.00000000001075 78.0
LYD2_k127_5118682_2 ASPIC and UnbV - - - 4.483e-222 714.0
LYD2_k127_5118682_3 Transporter, major facilitator family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 559.0
LYD2_k127_5118682_4 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 528.0
LYD2_k127_5118682_5 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 402.0
LYD2_k127_5118682_6 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 365.0
LYD2_k127_5118682_7 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 338.0
LYD2_k127_5118682_8 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 329.0
LYD2_k127_5118682_9 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007968 274.0
LYD2_k127_5135063_0 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 423.0
LYD2_k127_5135063_1 COGs COG5616 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 380.0
LYD2_k127_5135063_10 - - - - 0.000000000000005166 83.0
LYD2_k127_5135063_11 Tetratricopeptide repeat - - - 0.0000000002441 74.0
LYD2_k127_5135063_12 TIR domain - - - 0.000001376 57.0
LYD2_k127_5135063_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 356.0
LYD2_k127_5135063_3 NmrA-like family K19267 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001817 257.0
LYD2_k127_5135063_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001241 226.0
LYD2_k127_5135063_5 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000002992 232.0
LYD2_k127_5135063_6 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000003317 204.0
LYD2_k127_5135063_7 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K00558,K13639,K13640 - 2.1.1.37 0.0000000000000000000000000000000323 130.0
LYD2_k127_5135063_8 Adenylate cyclase - - - 0.0000000000000000000000000001058 133.0
LYD2_k127_5135063_9 Putative mono-oxygenase ydhR - - - 0.000000000000000002097 89.0
LYD2_k127_5158788_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 515.0
LYD2_k127_5158788_1 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 449.0
LYD2_k127_5158788_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 396.0
LYD2_k127_5158788_3 Domain of unknown function (DUF4835) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502 337.0
LYD2_k127_5158788_4 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 340.0
LYD2_k127_5158788_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000007429 261.0
LYD2_k127_5158788_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000001476 230.0
LYD2_k127_5158788_7 outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000002313 229.0
LYD2_k127_5158788_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000000000000000000000000000000000000002555 163.0
LYD2_k127_5178452_0 His Kinase A (phosphoacceptor) domain K02484,K07636 - 2.7.13.3 2.455e-223 706.0
LYD2_k127_5178452_1 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 346.0
LYD2_k127_5196074_0 Carboxyl transferase domain - - - 1.447e-267 830.0
LYD2_k127_5196074_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 540.0
LYD2_k127_5196074_2 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 376.0
LYD2_k127_5196074_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000008107 212.0
LYD2_k127_5196074_4 Biotin-requiring enzyme - - - 0.0000000000000000000004941 98.0
LYD2_k127_5196074_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0001028 45.0
LYD2_k127_5204359_0 L-rhamnose isomerase activity K00848,K01813 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008270,GO:0008740,GO:0009056,GO:0009987,GO:0016043,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0022607,GO:0030145,GO:0030246,GO:0032991,GO:0033296,GO:0036094,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0046872,GO:0046914,GO:0048029,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901575 2.7.1.5,5.3.1.14 1.345e-207 652.0
LYD2_k127_5204359_1 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 499.0
LYD2_k127_5204359_2 L-rhamnose-proton symport protein (RhaT) K02856 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 472.0
LYD2_k127_5204359_3 Domain of unknown function (DUF4956) - - - 0.00000000000000000000000000000000000000000000000000000000007394 211.0
LYD2_k127_5204359_4 VTC domain - - - 0.0000000000000000000000000000000000000000000000007039 184.0
LYD2_k127_5204359_5 Involved in the anomeric conversion of L-rhamnose K03534 - 5.1.3.32 0.000000000000000000000000000000000000000001687 157.0
LYD2_k127_5204359_6 Alpha-L-rhamnosidase N-terminal domain K05989 - 3.2.1.40 0.0000000000000001051 82.0
LYD2_k127_5204359_7 Protein of unknown function (DUF2490) - - - 0.00000000000007814 80.0
LYD2_k127_5204359_8 COG3209 Rhs family protein - - - 0.0004761 48.0
LYD2_k127_5205263_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 390.0
LYD2_k127_5205263_1 Putative Fe-S cluster K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 304.0
LYD2_k127_5205263_2 iron hydrogenase, small subunit K00336,K18332 - 1.12.1.3,1.6.5.3 0.000000001171 63.0
LYD2_k127_5221066_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 571.0
LYD2_k127_5221066_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 505.0
LYD2_k127_5221066_2 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 462.0
LYD2_k127_5221066_3 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 442.0
LYD2_k127_5221066_4 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 340.0
LYD2_k127_5224696_0 Tex-like protein N-terminal domain K06959 - - 6.077e-305 949.0
LYD2_k127_5224696_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 4.182e-275 868.0
LYD2_k127_5224696_2 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000003807 215.0
LYD2_k127_5224696_3 - - - - 0.00000000000000000000000000000000000000000000000000000000538 212.0
LYD2_k127_5224696_4 - - - - 0.00000000000148 73.0
LYD2_k127_5226608_0 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 410.0
LYD2_k127_5226608_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000001644 255.0
LYD2_k127_5226608_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001516 195.0
LYD2_k127_5226608_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000001255 155.0
LYD2_k127_5226608_4 S4 RNA-binding domain K04762 - - 0.0000000000000000000000000000000002686 135.0
LYD2_k127_5228957_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.017e-277 861.0
LYD2_k127_5228957_1 Sigma-54 interaction domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 559.0
LYD2_k127_5228957_10 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000004606 107.0
LYD2_k127_5228957_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 443.0
LYD2_k127_5228957_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 293.0
LYD2_k127_5228957_4 PFAM GSCFA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001394 282.0
LYD2_k127_5228957_5 Serine aminopeptidase, S33 K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000001172 234.0
LYD2_k127_5228957_6 helix_turn_helix, mercury resistance K22491 - - 0.00000000000000000000000000000000000000000000003982 181.0
LYD2_k127_5228957_7 Chaperonin 10 Kd subunit K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000001369 142.0
LYD2_k127_5228957_8 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000000000101 145.0
LYD2_k127_5228957_9 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000009539 119.0
LYD2_k127_5249541_0 Glycosyl hydrolases family 2, sugar binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 340.0
LYD2_k127_5249541_1 Uncharacterised ArCR, COG2043 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 293.0
LYD2_k127_5249894_0 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 462.0
LYD2_k127_5249894_1 Von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 421.0
LYD2_k127_5249894_2 Von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 396.0
LYD2_k127_5249894_3 TPR repeat - - - 0.00000000000000000000000000000000000000000002715 170.0
LYD2_k127_5249894_4 Bacterial SH3 domain - - - 0.0000000000000000000000000000001265 130.0
LYD2_k127_5249894_5 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000003285 112.0
LYD2_k127_5279768_0 Alpha-2-Macroglobulin K06894 - - 5.135e-269 866.0
LYD2_k127_5279768_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 377.0
LYD2_k127_5306292_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1065.0
LYD2_k127_5306292_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 484.0
LYD2_k127_5306292_10 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000001857 158.0
LYD2_k127_5306292_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 475.0
LYD2_k127_5306292_3 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 475.0
LYD2_k127_5306292_4 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 466.0
LYD2_k127_5306292_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 395.0
LYD2_k127_5306292_6 PFAM Bacterial transferase hexapeptide (three repeats) K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007885 319.0
LYD2_k127_5306292_7 proteins, homologs of microcin C7 resistance protein MccF K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001505 282.0
LYD2_k127_5306292_8 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000004788 184.0
LYD2_k127_5306292_9 sporulation - - - 0.0000000000000000000000000000000000000000003077 171.0
LYD2_k127_5320378_0 ASPIC and UnbV - - - 0.0 1318.0
LYD2_k127_5320378_1 ASPIC and UnbV - - - 0.0 1295.0
LYD2_k127_5320378_2 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 611.0
LYD2_k127_5320378_3 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008909 531.0
LYD2_k127_5320378_4 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009127 471.0
LYD2_k127_5329848_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 6.501e-296 935.0
LYD2_k127_5329848_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 387.0
LYD2_k127_5329848_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002603 281.0
LYD2_k127_5334455_0 Hypothetical glycosyl hydrolase 6 - - - 0.0 1085.0
LYD2_k127_5334455_1 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 3.881e-288 903.0
LYD2_k127_5334455_2 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 2.36e-204 647.0
LYD2_k127_5334455_3 Domain of unknown function (DUF4091) - - - 7.057e-202 640.0
LYD2_k127_5334455_4 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 501.0
LYD2_k127_5334455_5 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 462.0
LYD2_k127_5334455_6 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 400.0
LYD2_k127_5334455_7 endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 338.0
LYD2_k127_5334455_8 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 312.0
LYD2_k127_5334455_9 Hydrolase, alpha beta domain protein K06889 - - 0.000000000000000004745 89.0
LYD2_k127_5398170_0 TonB-linked outer membrane protein, SusC RagA family - - - 2.645e-306 967.0
LYD2_k127_5398170_1 Domain of unknown function - - - 5.489e-204 646.0
LYD2_k127_5398170_2 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 544.0
LYD2_k127_5398170_3 Alpha galactosidase A K07407 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 527.0
LYD2_k127_5398170_4 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 479.0
LYD2_k127_5398170_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 291.0
LYD2_k127_5398170_6 IPT/TIG domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000718 255.0
LYD2_k127_5398170_7 Melibiase - - - 0.00000000000000000000000000000000000007746 164.0
LYD2_k127_5398170_8 beta-galactosidase activity K01190 - 3.2.1.23 0.0000000000000000000001016 100.0
LYD2_k127_5507778_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 571.0
LYD2_k127_5507778_1 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002885 274.0
LYD2_k127_5507778_2 - - - - 0.000000000000000000000000000000000001591 150.0
LYD2_k127_5507778_3 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000005994 69.0
LYD2_k127_5507778_4 Signal peptidase - - - 0.00005568 52.0
LYD2_k127_5508835_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 3.643e-253 802.0
LYD2_k127_5508835_1 Threonine synthase N terminus K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 524.0
LYD2_k127_5508835_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001101 283.0
LYD2_k127_5508835_3 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002725 257.0
LYD2_k127_5508835_4 - - - - 0.00000000000000000000000000000002096 138.0
LYD2_k127_5570503_0 Belongs to the glycosyl hydrolase 2 family - - - 0.0 1325.0
LYD2_k127_5570503_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 432.0
LYD2_k127_5570503_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 380.0
LYD2_k127_5570503_3 polysaccharide deacetylase K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 331.0
LYD2_k127_5570503_4 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 328.0
LYD2_k127_5570503_5 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000005347 188.0
LYD2_k127_5570503_6 potassium uptake protein, TrkH family K03498 - - 0.000000000000000000001242 98.0
LYD2_k127_5570503_7 Sugar (and other) transporter - - - 0.00000000001647 65.0
LYD2_k127_5578484_0 Calcium-translocating P-type ATPase, PMCA-type K01537 - 3.6.3.8 0.0 1064.0
LYD2_k127_5578484_1 usher protein - - - 4.919e-288 925.0
LYD2_k127_5578484_10 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 494.0
LYD2_k127_5578484_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 416.0
LYD2_k127_5578484_12 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 395.0
LYD2_k127_5578484_13 PFAM Glycoside hydrolase, family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 380.0
LYD2_k127_5578484_14 MacB-like periplasmic core domain K02004,K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 383.0
LYD2_k127_5578484_15 protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009322 332.0
LYD2_k127_5578484_16 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 326.0
LYD2_k127_5578484_17 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 316.0
LYD2_k127_5578484_18 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 321.0
LYD2_k127_5578484_19 Chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 300.0
LYD2_k127_5578484_2 Bacterial protein of unknown function (DUF853) K06915 - - 1.069e-237 743.0
LYD2_k127_5578484_20 Protein of unknown function (DUF3078) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 299.0
LYD2_k127_5578484_21 phosphatidylcholine synthase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005877 261.0
LYD2_k127_5578484_22 Permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000149 255.0
LYD2_k127_5578484_23 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003363 247.0
LYD2_k127_5578484_24 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000002334 208.0
LYD2_k127_5578484_25 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000000005251 192.0
LYD2_k127_5578484_26 Lysin motif - - - 0.00000000000000000000000000000000000000000007626 164.0
LYD2_k127_5578484_27 rRNA binding - - - 0.00000000000000000000000000000000000000001236 155.0
LYD2_k127_5578484_28 Domain of unknown function (DUF4402) - - - 0.000000000000000000000000000000000000001462 153.0
LYD2_k127_5578484_29 TIGRFAM geranylgeranyl reductase family - - - 0.0000000000000000000000000000007836 125.0
LYD2_k127_5578484_3 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 1.057e-217 713.0
LYD2_k127_5578484_30 - - - - 0.00000000000000000000000000000714 128.0
LYD2_k127_5578484_31 Domain of unknown function (DUF1508) K09946 - - 0.00000000000000000000000000001574 121.0
LYD2_k127_5578484_32 - - - - 0.000000000000000000000000008176 116.0
LYD2_k127_5578484_33 Bacterial PH domain K08981 - - 0.0000000000000000000000001085 110.0
LYD2_k127_5578484_35 - - - - 0.0000000000000000001896 93.0
LYD2_k127_5578484_36 Dodecin K09165 - - 0.0000000000000000004398 88.0
LYD2_k127_5578484_37 Domain of unknown function (DUF4402) - - - 0.00000000000001519 80.0
LYD2_k127_5578484_38 Domain of unknown function (DUF4402) - - - 0.0000000005468 67.0
LYD2_k127_5578484_39 - - - - 0.000000002194 60.0
LYD2_k127_5578484_4 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 587.0
LYD2_k127_5578484_5 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 558.0
LYD2_k127_5578484_6 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 561.0
LYD2_k127_5578484_7 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 537.0
LYD2_k127_5578484_8 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 489.0
LYD2_k127_5578484_9 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 482.0
LYD2_k127_5584224_0 indolepyruvate ferredoxin oxidoreductase activity K00179,K08941 - 1.2.7.8 2.558e-222 700.0
LYD2_k127_5584224_1 Oxidoreductase, NAD-binding domain protein - - - 1.274e-204 647.0
LYD2_k127_5584224_10 Redoxin family - - - 0.0000000000000000000000000000000000000000000000000000001597 199.0
LYD2_k127_5584224_11 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000002131 189.0
LYD2_k127_5584224_12 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000006687 145.0
LYD2_k127_5584224_13 Single-strand binding protein family K03111 - - 0.000000000000000000000000000000000001231 143.0
LYD2_k127_5584224_14 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000002942 132.0
LYD2_k127_5584224_15 - - - - 0.00000000000000000000000000002343 121.0
LYD2_k127_5584224_16 CarboxypepD_reg-like domain - - - 0.000000000000000000000000003711 119.0
LYD2_k127_5584224_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 359.0
LYD2_k127_5584224_3 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 339.0
LYD2_k127_5584224_4 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 312.0
LYD2_k127_5584224_5 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001498 281.0
LYD2_k127_5584224_6 Peptidase, M28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003154 291.0
LYD2_k127_5584224_7 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002332 268.0
LYD2_k127_5584224_8 Peptidase, M28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005036 275.0
LYD2_k127_5584224_9 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000518 251.0
LYD2_k127_5601114_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.542e-222 695.0
LYD2_k127_5601114_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000008338 185.0
LYD2_k127_5613818_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 516.0
LYD2_k127_5613818_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 407.0
LYD2_k127_5613818_2 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000008972 157.0
LYD2_k127_5613818_3 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00002591 50.0
LYD2_k127_5653009_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 490.0
LYD2_k127_5653009_1 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K02100,K03444,K08138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 486.0
LYD2_k127_5726870_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003881 268.0
LYD2_k127_5726870_1 Fibronectin type 3 domain K21571 - - 0.00000000000000000000000000000000000000000004509 173.0
LYD2_k127_5726870_2 fibronectin type III domain protein K21571 - - 0.000000000000000000000000000000000000001367 153.0
LYD2_k127_5726870_3 - - - - 0.0000000000000000000002274 103.0
LYD2_k127_5726870_4 radical SAM domain protein K22226 - - 0.000000000000008372 85.0
LYD2_k127_5732045_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1251.0
LYD2_k127_5732045_1 Putative Phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 530.0
LYD2_k127_5732045_2 PFAM Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 310.0
LYD2_k127_5732045_3 Sporulation related domain - - - 0.00000000000000000002643 96.0
LYD2_k127_5734513_0 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 514.0
LYD2_k127_5734513_1 Psort location Cytoplasmic, score 8.96 K04516 - 5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 454.0
LYD2_k127_5734513_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 409.0
LYD2_k127_5734513_3 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 307.0
LYD2_k127_5734513_4 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000002195 253.0
LYD2_k127_5734513_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000007722 236.0
LYD2_k127_5736669_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.0 1172.0
LYD2_k127_5736669_1 Peptidase M16 K07263 - - 0.0 1056.0
LYD2_k127_5736669_10 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750 2.3.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 436.0
LYD2_k127_5736669_11 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 437.0
LYD2_k127_5736669_12 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 386.0
LYD2_k127_5736669_13 Xylose isomerase-like TIM barrel K03079 - 5.1.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 308.0
LYD2_k127_5736669_14 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 299.0
LYD2_k127_5736669_15 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 293.0
LYD2_k127_5736669_16 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005039 256.0
LYD2_k127_5736669_17 CO dehydrogenase/acetyl-CoA synthase delta subunit K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000001011 258.0
LYD2_k127_5736669_18 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000002294 235.0
LYD2_k127_5736669_19 O-Methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000005829 238.0
LYD2_k127_5736669_2 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0 1007.0
LYD2_k127_5736669_20 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000001746 248.0
LYD2_k127_5736669_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002967 231.0
LYD2_k127_5736669_22 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001568 228.0
LYD2_k127_5736669_23 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000258 190.0
LYD2_k127_5736669_24 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000003064 198.0
LYD2_k127_5736669_25 IPT/TIG domain - - - 0.0000000000000000000000000000000000000000000002142 181.0
LYD2_k127_5736669_26 IPT/TIG domain - - - 0.00000000000000000000000000000000000000000004657 174.0
LYD2_k127_5736669_27 Vitamin B12 dependent methionine synthase, activation domain protein - - - 0.000000000000000000000000000000000000000007789 163.0
LYD2_k127_5736669_28 PFAM OsmC family protein K09136 - - 0.0000000000000000000000000000000001367 136.0
LYD2_k127_5736669_29 carboxylic ester hydrolase activity K01259 - 3.4.11.5 0.0000000000000000000000000000000001664 144.0
LYD2_k127_5736669_3 CarboxypepD_reg-like domain - - - 2.275e-263 836.0
LYD2_k127_5736669_30 Belongs to the Fur family K09825 - - 0.000000000000000000000002874 107.0
LYD2_k127_5736669_31 Outer membrane protein beta-barrel domain - - - 0.0000000000000000002768 101.0
LYD2_k127_5736669_32 - - - - 0.00000000000001206 83.0
LYD2_k127_5736669_33 - - - - 0.0000000004651 63.0
LYD2_k127_5736669_35 - - - - 0.000001024 53.0
LYD2_k127_5736669_36 metallopeptidase activity - - - 0.00005549 53.0
LYD2_k127_5736669_37 - - - - 0.00005571 47.0
LYD2_k127_5736669_38 - - - - 0.00005664 53.0
LYD2_k127_5736669_39 Peptidase, M28 family - - - 0.00008915 56.0
LYD2_k127_5736669_4 WD40-like Beta Propeller Repeat - - - 1.114e-245 766.0
LYD2_k127_5736669_5 Xylose isomerase K01805 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 2.973e-215 675.0
LYD2_k127_5736669_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.148e-202 639.0
LYD2_k127_5736669_7 Carbohydrate kinase, FGGY family protein K00854 - 2.7.1.17 1.417e-201 638.0
LYD2_k127_5736669_8 Protein of unknown function (DUF2961) - - - 3.503e-199 627.0
LYD2_k127_5736669_9 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 504.0
LYD2_k127_5745095_0 Aldo Keto reductase - - - 4.909e-200 635.0
LYD2_k127_5745095_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 497.0
LYD2_k127_5745095_2 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 402.0
LYD2_k127_5745095_3 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006068 336.0
LYD2_k127_5745095_4 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 314.0
LYD2_k127_5745095_5 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000001328 204.0
LYD2_k127_5745095_6 acylphosphatase K01512 - 3.6.1.7 0.000000000000008662 78.0
LYD2_k127_5758908_0 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0 1273.0
LYD2_k127_5758908_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.825e-230 719.0
LYD2_k127_5758908_10 UTRA domain K03710,K10711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000275 268.0
LYD2_k127_5758908_11 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01489 - 3.5.4.5 0.000000000000000000000000000000000000000000000000000000002182 206.0
LYD2_k127_5758908_12 PFAM Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000107 192.0
LYD2_k127_5758908_13 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000002001 151.0
LYD2_k127_5758908_14 RNA recognition motif - - - 0.00000000000000000000000000000003075 128.0
LYD2_k127_5758908_15 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.00000000000000000004955 95.0
LYD2_k127_5758908_16 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000007462 70.0
LYD2_k127_5758908_17 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.00004872 46.0
LYD2_k127_5758908_18 - K19033 - - 0.0005841 49.0
LYD2_k127_5758908_2 Class II Aldolase and Adducin N-terminal domain - - - 9.001e-223 710.0
LYD2_k127_5758908_3 PFAM Alcohol dehydrogenase zinc-binding domain protein K19956 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007834 601.0
LYD2_k127_5758908_4 acetolactate synthase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 437.0
LYD2_k127_5758908_5 e3 binding domain K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 430.0
LYD2_k127_5758908_6 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 374.0
LYD2_k127_5758908_7 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 364.0
LYD2_k127_5758908_8 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 352.0
LYD2_k127_5758908_9 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008546 285.0
LYD2_k127_5776981_0 Pfam Beta-galactosidase trimerisation domain K12308 - 3.2.1.23 2.562e-312 970.0
LYD2_k127_5776981_1 Domain of unknown function (DUF5009) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 419.0
LYD2_k127_5776981_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 351.0
LYD2_k127_5776981_3 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 314.0
LYD2_k127_5776981_4 pfam nipsnap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007971 280.0
LYD2_k127_5776981_5 PFAM 5 nucleotidase deoxy - - - 0.00000000000000000000000000000000000000000000000000000000004709 209.0
LYD2_k127_5776981_6 transmembrane transporter activity - - - 0.0000000000013 70.0
LYD2_k127_5784626_0 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 591.0
LYD2_k127_5784626_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 481.0
LYD2_k127_5784626_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002661 246.0
LYD2_k127_5784626_11 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000001174 220.0
LYD2_k127_5784626_12 6-O-methylguanine DNA methyltransferase, DNA binding domain protein K00567,K07443 - 2.1.1.63 0.0000000000000000000000000000000000000000001452 162.0
LYD2_k127_5784626_13 PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000005506 141.0
LYD2_k127_5784626_14 Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000001175 139.0
LYD2_k127_5784626_15 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000001371 121.0
LYD2_k127_5784626_16 NifU-like domain - - - 0.000000000000000000000003774 103.0
LYD2_k127_5784626_2 PSP1 C-terminal domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 416.0
LYD2_k127_5784626_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 408.0
LYD2_k127_5784626_4 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 386.0
LYD2_k127_5784626_5 acyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 374.0
LYD2_k127_5784626_6 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 370.0
LYD2_k127_5784626_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001294 248.0
LYD2_k127_5784626_8 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000633 248.0
LYD2_k127_5784626_9 PglZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004321 242.0
LYD2_k127_5786487_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 6.105e-279 867.0
LYD2_k127_5786487_1 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 495.0
LYD2_k127_5786487_10 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000002256 126.0
LYD2_k127_5786487_2 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 424.0
LYD2_k127_5786487_3 Phosphorylase superfamily K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 409.0
LYD2_k127_5786487_4 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 358.0
LYD2_k127_5786487_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001795 225.0
LYD2_k127_5786487_6 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000007371 221.0
LYD2_k127_5786487_7 type I restriction enzyme - - - 0.00000000000000000000000000000000000001271 149.0
LYD2_k127_5786487_8 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000000000000009236 149.0
LYD2_k127_5786487_9 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0000000000000000000000000000000001718 133.0
LYD2_k127_5793751_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 8.065e-235 732.0
LYD2_k127_5793751_1 SPFH Band 7 PHB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 425.0
LYD2_k127_5793751_2 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005819 246.0
LYD2_k127_5793751_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000268 217.0
LYD2_k127_5793751_4 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000000000000000000000000000000000002737 175.0
LYD2_k127_5798_0 Ftsk_gamma K03466 - - 5.994e-243 774.0
LYD2_k127_5798_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 546.0
LYD2_k127_5798_10 NlpC/P60 family - - - 0.00000000000000000000000003779 114.0
LYD2_k127_5798_11 Protein of unknown function (DUF1573) - - - 0.00000000000000000000003718 104.0
LYD2_k127_5798_12 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000005068 83.0
LYD2_k127_5798_13 - - - - 0.0000001123 62.0
LYD2_k127_5798_2 7TM-HD extracellular K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 557.0
LYD2_k127_5798_3 Amino acid kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 462.0
LYD2_k127_5798_4 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 310.0
LYD2_k127_5798_5 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000007856 201.0
LYD2_k127_5798_6 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000000000000000000000000000000002095 174.0
LYD2_k127_5798_7 Protein of unknown function (DUF3276) - - - 0.00000000000000000000000000000000003218 138.0
LYD2_k127_5798_8 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000486 124.0
LYD2_k127_5798_9 outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000001329 117.0
LYD2_k127_5809839_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 323.0
LYD2_k127_5809839_1 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000002981 237.0
LYD2_k127_5809839_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000002003 198.0
LYD2_k127_5809839_3 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000008203 178.0
LYD2_k127_5809839_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000001213 123.0
LYD2_k127_5809839_5 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000001195 56.0
LYD2_k127_5814738_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 430.0
LYD2_k127_5814738_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 294.0
LYD2_k127_5814738_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000002164 232.0
LYD2_k127_5814738_3 NUDIX domain - - - 0.0000000000000000000000000000000000001252 149.0
LYD2_k127_5814738_5 Orotate phosphoribosyltransferase - - - 0.0000000000009422 74.0
LYD2_k127_5820478_0 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.0 1115.0
LYD2_k127_5820478_1 glycoside hydrolase family 2 sugar binding - - - 6.03e-322 1003.0
LYD2_k127_5820478_10 ADP-ribosylglycohydrolase - - - 2.495e-197 628.0
LYD2_k127_5820478_11 Putative collagen-binding domain of a collagenase - - - 5.947e-197 623.0
LYD2_k127_5820478_12 Protein of unknown function (DUF4038) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 585.0
LYD2_k127_5820478_13 Oligoendopeptidase f K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 563.0
LYD2_k127_5820478_14 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 548.0
LYD2_k127_5820478_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 455.0
LYD2_k127_5820478_17 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 445.0
LYD2_k127_5820478_18 Sugar transport protein K05340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 422.0
LYD2_k127_5820478_19 PFAM Iron-containing alcohol dehydrogenase K00048 - 1.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 389.0
LYD2_k127_5820478_2 Oligoendopeptidase f - - - 1.375e-264 830.0
LYD2_k127_5820478_20 Inosine-uridine preferring nucleoside hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 373.0
LYD2_k127_5820478_21 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 370.0
LYD2_k127_5820478_22 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 354.0
LYD2_k127_5820478_23 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 314.0
LYD2_k127_5820478_24 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 282.0
LYD2_k127_5820478_25 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002844 263.0
LYD2_k127_5820478_26 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001256 271.0
LYD2_k127_5820478_27 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000000000000000000000000000000001503 214.0
LYD2_k127_5820478_28 DoxX K16937 - 1.8.5.2 0.0000000000000000000000000000000000118 154.0
LYD2_k127_5820478_29 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000005301 137.0
LYD2_k127_5820478_3 Aromatic amino acid lyase K01745 - 4.3.1.3 6.863e-256 796.0
LYD2_k127_5820478_30 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 0.0000000000000001313 81.0
LYD2_k127_5820478_31 - - - - 0.00000001523 64.0
LYD2_k127_5820478_4 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 8.206e-256 794.0
LYD2_k127_5820478_5 PFAM TonB-dependent Receptor Plug - - - 2.422e-247 792.0
LYD2_k127_5820478_6 Alpha-L-fucosidase K01206 - 3.2.1.51 9.865e-223 696.0
LYD2_k127_5820478_7 Melibiase K07407 - 3.2.1.22 3.108e-205 661.0
LYD2_k127_5820478_8 Alpha-L-fucosidase K01206 - 3.2.1.51 7.436e-205 646.0
LYD2_k127_5820478_9 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 3.47e-201 635.0
LYD2_k127_5832332_0 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02484,K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 592.0
LYD2_k127_5832332_1 permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 404.0
LYD2_k127_5832332_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 399.0
LYD2_k127_5832332_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 397.0
LYD2_k127_5832332_4 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 383.0
LYD2_k127_5832332_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000000000000000000000000000000000000000000000001116 209.0
LYD2_k127_5832332_6 Pfam Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000002149 203.0
LYD2_k127_5836134_0 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 383.0
LYD2_k127_5836134_1 transposase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 327.0
LYD2_k127_5836134_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000002496 203.0
LYD2_k127_5836134_3 Penicillinase repressor - - - 0.00000000000000000000000000000000000000000000000001033 183.0
LYD2_k127_5836134_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000005977 126.0
LYD2_k127_5836134_5 - - - - 0.000000001255 70.0
LYD2_k127_5836134_6 - - - - 0.0000002005 59.0
LYD2_k127_5837293_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086 385.0
LYD2_k127_5837293_1 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000002461 153.0
LYD2_k127_5837293_2 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000003873 154.0
LYD2_k127_5837293_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000001572 132.0
LYD2_k127_5837293_4 SPTR NmrA family protein - - - 0.00000001996 57.0
LYD2_k127_583800_0 Hsp90 protein K04079 - - 1.254e-214 673.0
LYD2_k127_583800_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 497.0
LYD2_k127_583800_2 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000287 236.0
LYD2_k127_583800_3 - - - - 0.0000000000000000000000000000000124 138.0
LYD2_k127_583800_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000002656 93.0
LYD2_k127_5845557_0 Motility related/secretion protein - - - 0.0 1956.0
LYD2_k127_5845557_1 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 556.0
LYD2_k127_5845557_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000002618 74.0
LYD2_k127_5845557_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 493.0
LYD2_k127_5845557_3 Radical SAM K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 458.0
LYD2_k127_5845557_4 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 450.0
LYD2_k127_5845557_5 Cytosol aminopeptidase family, catalytic domain K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 401.0
LYD2_k127_5845557_6 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001001 274.0
LYD2_k127_5845557_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000003837 228.0
LYD2_k127_5845557_8 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000000000000000000002561 188.0
LYD2_k127_5845557_9 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000738 160.0
LYD2_k127_5868328_0 PFAM ASPIC and UnbV - - - 0.0 1366.0
LYD2_k127_5868328_1 Domain of unknown function (DUF4838) - - - 3.488e-209 675.0
LYD2_k127_5868328_2 Glycosyl hydrolase family 20, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 529.0
LYD2_k127_5868328_3 TonB dependent receptor - - - 0.00000000000000000002215 93.0
LYD2_k127_5878567_0 K+ potassium transporter K03549 - - 1.29e-225 716.0
LYD2_k127_5878567_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 3.282e-211 662.0
LYD2_k127_5878567_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006293 529.0
LYD2_k127_5878567_3 capsule biosynthesis protein CapA K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 342.0
LYD2_k127_5878567_4 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000000000000000000000003922 220.0
LYD2_k127_5878567_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000005671 173.0
LYD2_k127_5911605_0 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 533.0
LYD2_k127_5911605_1 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 389.0
LYD2_k127_5911605_2 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 352.0
LYD2_k127_5911605_3 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000557 156.0
LYD2_k127_5917776_0 Belongs to the glycosyl hydrolase 31 family K01811 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.177 0.0 1329.0
LYD2_k127_5917776_1 Glycoside hydrolase, family 2, TIM barrel K01190 - 3.2.1.23 3.912e-320 990.0
LYD2_k127_5980621_0 Ergosterol biosynthesis ERG4/ERG24 family K00213,K00223 - 1.3.1.21,1.3.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005176 476.0
LYD2_k127_5980621_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001167 250.0
LYD2_k127_5980621_2 short-chain dehydrogenase K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000009087 239.0
LYD2_k127_5980621_3 Amidinotransferase K01482 - 3.5.3.18 0.00000000000000000000000000000000000000000000007789 171.0
LYD2_k127_5980621_4 Transcriptional regulator K07727 - - 0.000000000000000000000003274 105.0
LYD2_k127_5991962_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 453.0
LYD2_k127_5991962_1 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 432.0
LYD2_k127_5991962_2 Belongs to the DegT DnrJ EryC1 family K13010,K21328 - 2.6.1.102,2.6.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 299.0
LYD2_k127_5991962_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004993 259.0
LYD2_k127_5991962_4 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000159 276.0
LYD2_k127_5991962_5 LmbE homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000004069 243.0
LYD2_k127_5991962_6 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000006976 130.0
LYD2_k127_5991962_7 spore germination - - - 0.000134 44.0
LYD2_k127_6006018_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1313.0
LYD2_k127_6006018_1 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 6.361e-229 715.0
LYD2_k127_6006018_2 Oxidoreductase domain protein - - - 5.821e-212 667.0
LYD2_k127_6006018_3 Starch-binding associating with outer membrane K21572 - - 6.388e-202 640.0
LYD2_k127_6006018_4 Domain of unknown function (DUF4432) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 291.0
LYD2_k127_6006018_5 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002513 266.0
LYD2_k127_6006018_6 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002364 248.0
LYD2_k127_6006018_7 Protein of unknown function (DUF3795) - - - 0.00000000000000009898 83.0
LYD2_k127_6006018_8 fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00001617 50.0
LYD2_k127_60070_0 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000001268 224.0
LYD2_k127_60070_1 peptidase activity K20333 - - 0.000000000000000000000000000000000000000000001035 179.0
LYD2_k127_60070_2 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000000001537 173.0
LYD2_k127_60070_3 - - - - 0.00000000000000000000000000000001775 130.0
LYD2_k127_6011460_0 Quinol cytochrome c oxidoreductase K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 354.0
LYD2_k127_6011460_1 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 345.0
LYD2_k127_6055295_0 Glycosyl hydrolase family 9 - - - 0.0 1033.0
LYD2_k127_6055295_1 COG NOG04984 non supervised orthologous group K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 359.0
LYD2_k127_6099608_0 NAD(P)H dehydrogenase (quinone) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 378.0
LYD2_k127_6099608_1 Leucine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002977 221.0
LYD2_k127_6099608_2 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000000236 152.0
LYD2_k127_6099608_3 methyltransferase - - - 0.000000000000000002994 91.0
LYD2_k127_6099608_4 4Fe-4S ferredoxin - - - 0.00000000000000001795 90.0
LYD2_k127_6102494_0 Glycosyl hydrolase family 36 N-terminal domain K07407 - 3.2.1.22 9.895e-312 970.0
LYD2_k127_6102494_1 PFAM TonB-dependent Receptor Plug - - - 1.883e-214 684.0
LYD2_k127_6102494_10 Tetratricopeptide repeat - - - 0.000000000000000000003437 106.0
LYD2_k127_6102494_2 Carbohydrate family 9 binding domain-like - - - 3.371e-197 646.0
LYD2_k127_6102494_3 PFAM Glycosyl transferase family 2 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 533.0
LYD2_k127_6102494_4 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 507.0
LYD2_k127_6102494_5 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 474.0
LYD2_k127_6102494_6 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008799 339.0
LYD2_k127_6102494_7 Acetyltransferase (GNAT) domain K03828 - - 0.000000000000000000000000000000000000000000000000000000000000001041 222.0
LYD2_k127_6102494_8 lyase activity - - - 0.00000000000000000000000009056 123.0
LYD2_k127_6102494_9 cheY-homologous receiver domain - - - 0.000000000000000000000001707 106.0
LYD2_k127_6103290_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 8.185e-225 715.0
LYD2_k127_6103290_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 575.0
LYD2_k127_6103290_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 478.0
LYD2_k127_6103290_3 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 377.0
LYD2_k127_6103290_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 335.0
LYD2_k127_6103290_5 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 349.0
LYD2_k127_6175657_0 glycosyl hydrolase, family 3 K05349 - 3.2.1.21 0.0 1033.0
LYD2_k127_6175657_1 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 3.515e-249 794.0
LYD2_k127_6175657_10 amine dehydrogenase activity K21449 - - 0.00000000000000000000009994 106.0
LYD2_k127_6175657_12 Putative prokaryotic signal transducing protein - - - 0.00000005072 57.0
LYD2_k127_6175657_2 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 514.0
LYD2_k127_6175657_3 Aspartate-ammonia ligase K01914 - 6.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 458.0
LYD2_k127_6175657_4 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 368.0
LYD2_k127_6175657_5 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 357.0
LYD2_k127_6175657_6 NmrA-like family K07118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 301.0
LYD2_k127_6175657_7 Transcription elongation factor K04760 - - 0.000000000000000000000000000000000000000000000000000000000001611 213.0
LYD2_k127_6175657_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000005764 188.0
LYD2_k127_6175657_9 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000002063 139.0
LYD2_k127_6175877_0 Carboxyl transferase domain - - - 2.306e-226 711.0
LYD2_k127_6175877_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 555.0
LYD2_k127_6175877_2 TIGRFAM glucose galactose transporter K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 488.0
LYD2_k127_6175877_3 PFAM Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 364.0
LYD2_k127_6175877_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001324 278.0
LYD2_k127_6175877_5 - - - - 0.000000000000000000000000000000000000000000000000000002147 198.0
LYD2_k127_6175877_6 Biotin-requiring enzyme - - - 0.000000000000000000000000000000002514 135.0
LYD2_k127_6175877_7 CoA-binding domain - - - 0.00000004055 62.0
LYD2_k127_6212883_0 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 588.0
LYD2_k127_6212883_1 Pyridoxal-phosphate dependent enzyme K01738,K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 484.0
LYD2_k127_6212883_2 Psort location Cytoplasmic, score 9.97 K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003252 275.0
LYD2_k127_6212883_3 Belongs to the pirin family K06911 - - 0.000000000000000000000002709 104.0
LYD2_k127_6224878_0 Polyribonucleotide nucleotidyltransferase, RNA binding domain K00962 - 2.7.7.8 4e-323 1002.0
LYD2_k127_6224878_1 PCRF K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 549.0
LYD2_k127_6224878_10 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000004542 139.0
LYD2_k127_6224878_11 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000005071 137.0
LYD2_k127_6224878_12 Divergent 4Fe-4S mono-cluster - - - 0.00000000000000000000000000000007019 131.0
LYD2_k127_6224878_13 deoxynucleoside kinase - - - 0.000001522 51.0
LYD2_k127_6224878_14 Iron-binding zinc finger CDGSH type - - - 0.00001435 50.0
LYD2_k127_6224878_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 549.0
LYD2_k127_6224878_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 518.0
LYD2_k127_6224878_4 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 385.0
LYD2_k127_6224878_5 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 387.0
LYD2_k127_6224878_6 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 288.0
LYD2_k127_6224878_7 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008364 287.0
LYD2_k127_6224878_8 RNA methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001154 231.0
LYD2_k127_6224878_9 Thymidylate kinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000003641 215.0
LYD2_k127_6238324_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 3.53e-206 658.0
LYD2_k127_6238324_1 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 400.0
LYD2_k127_6238324_2 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003999 373.0
LYD2_k127_6238324_3 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 304.0
LYD2_k127_6238324_4 ABC transporter, ATP-binding protein K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 287.0
LYD2_k127_6279907_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.839e-269 844.0
LYD2_k127_6279907_1 PFAM beta-lactamase domain protein K22405 - 1.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 488.0
LYD2_k127_6279907_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000003233 243.0
LYD2_k127_6279907_3 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000005438 214.0
LYD2_k127_6279907_4 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000006782 209.0
LYD2_k127_6279907_5 Ribosomal silencing factor during starvation K09710 - - 0.000000000000000000000000000000000999 133.0
LYD2_k127_6279907_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001081 124.0
LYD2_k127_6297668_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 2.477e-264 823.0
LYD2_k127_6297668_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 344.0
LYD2_k127_6297668_2 - - - - 0.0000000000000000000007701 100.0
LYD2_k127_632995_0 SPTR RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 3.493e-199 630.0
LYD2_k127_632995_1 Transposase (IS116 IS110 IS902 family) K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 409.0
LYD2_k127_632995_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000004313 199.0
LYD2_k127_632995_4 - - - - 0.000000001457 65.0
LYD2_k127_640002_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1274.0
LYD2_k127_640002_1 - - - - 1.246e-229 765.0
LYD2_k127_640002_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003346 255.0
LYD2_k127_640002_11 Glyoxalase-like domain K01759 - 4.4.1.5 0.0000000000000000000000000000000000000003254 152.0
LYD2_k127_640002_12 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000000000000000008351 155.0
LYD2_k127_640002_13 Arc-like DNA binding domain - - - 0.000000000002197 68.0
LYD2_k127_640002_14 - - - - 0.000000009491 58.0
LYD2_k127_640002_2 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 394.0
LYD2_k127_640002_3 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 366.0
LYD2_k127_640002_4 Psort location Cytoplasmic, score 8.96 K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 340.0
LYD2_k127_640002_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 326.0
LYD2_k127_640002_6 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 310.0
LYD2_k127_640002_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003711 273.0
LYD2_k127_640002_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000138 268.0
LYD2_k127_640002_9 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001313 261.0
LYD2_k127_646927_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 356.0
LYD2_k127_667090_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335,K18331 - 1.12.1.3,1.6.5.3 4.727e-319 983.0
LYD2_k127_667090_1 Iron hydrogenase small subunit K00123,K18332 - 1.12.1.3,1.17.1.9 8.587e-298 922.0
LYD2_k127_667090_10 Thioredoxin-like [2Fe-2S] ferredoxin K18330 - 1.12.1.3 0.00000000000000000000000000000000000000000000000000000000000000000002391 235.0
LYD2_k127_667090_11 LysM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001596 239.0
LYD2_k127_667090_12 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.00000000000000000000000000000000000000000000000000007008 196.0
LYD2_k127_667090_13 Ferredoxin K17992 - 1.12.1.3 0.0000000000000000000000000000000000000000000000001285 179.0
LYD2_k127_667090_14 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000007475 178.0
LYD2_k127_667090_15 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000002636 170.0
LYD2_k127_667090_16 COG NOG14473 non supervised orthologous group - - - 0.00000000000000000000000000000000000001341 150.0
LYD2_k127_667090_17 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000002866 66.0
LYD2_k127_667090_2 Domain of unknown function (DUF3362) - - - 3.42e-249 782.0
LYD2_k127_667090_3 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 574.0
LYD2_k127_667090_4 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 490.0
LYD2_k127_667090_5 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 391.0
LYD2_k127_667090_6 Phosphoribosyl-ATP pyrophosphohydrolase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 354.0
LYD2_k127_667090_7 Arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 335.0
LYD2_k127_667090_8 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 348.0
LYD2_k127_667090_9 DnaJ domain protein K05801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 284.0
LYD2_k127_667679_0 tRNA synthetases class II (A) K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1024.0
LYD2_k127_667679_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 4.63e-219 686.0
LYD2_k127_667679_10 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 285.0
LYD2_k127_667679_11 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003332 266.0
LYD2_k127_667679_12 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000003836 248.0
LYD2_k127_667679_13 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000006005 228.0
LYD2_k127_667679_14 Acetyltransferase, gnat family K00657 - 2.3.1.57 0.00000000000000000000000000000000000000000000000000000001879 201.0
LYD2_k127_667679_15 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000001635 140.0
LYD2_k127_667679_16 - - - - 0.0000000002356 70.0
LYD2_k127_667679_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 517.0
LYD2_k127_667679_3 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 443.0
LYD2_k127_667679_4 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 417.0
LYD2_k127_667679_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 399.0
LYD2_k127_667679_6 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 391.0
LYD2_k127_667679_7 Peptidase family M3 K01284,K01414 - 3.4.15.5,3.4.24.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 320.0
LYD2_k127_667679_8 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 311.0
LYD2_k127_667679_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 298.0
LYD2_k127_680552_0 Bacterial alpha-L-rhamnosidase C-terminal domain K05989 - 3.2.1.40 0.0 1373.0
LYD2_k127_680552_1 Serine hydroxymethyltransferase K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 566.0
LYD2_k127_680552_2 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 437.0
LYD2_k127_680552_3 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 339.0
LYD2_k127_680552_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000001327 153.0
LYD2_k127_689255_0 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 388.0
LYD2_k127_689255_1 Domain of unknown function (DUF4268) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002843 243.0
LYD2_k127_696048_0 Protein of unknown function (DUF2723) - - - 0.0 1023.0
LYD2_k127_696048_1 Tellurite resistance protein TerB K21397 - - 9.539e-302 955.0
LYD2_k127_696048_10 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 331.0
LYD2_k127_696048_11 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 318.0
LYD2_k127_696048_12 CotH kinase protein K06330 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 319.0
LYD2_k127_696048_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 319.0
LYD2_k127_696048_14 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 296.0
LYD2_k127_696048_15 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001468 287.0
LYD2_k127_696048_16 COG3279 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000835 273.0
LYD2_k127_696048_17 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001313 274.0
LYD2_k127_696048_18 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000509 268.0
LYD2_k127_696048_19 Ribosome recycling factor K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002335 245.0
LYD2_k127_696048_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.361e-274 861.0
LYD2_k127_696048_20 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000007576 235.0
LYD2_k127_696048_21 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000007333 232.0
LYD2_k127_696048_22 protein localization to T-tubule K10380,K15503,K21440 - - 0.000000000000000000000000000000000000000000000000000000000000000004538 243.0
LYD2_k127_696048_23 Cell envelope biogenesis protein OmpA K02557 - - 0.00000000000000000000000000000000000000000000000000000000000002998 226.0
LYD2_k127_696048_24 PFAM Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000000000000000000002655 215.0
LYD2_k127_696048_25 - - - - 0.00000000000000000000000000000000000000000000000000000005213 209.0
LYD2_k127_696048_26 - - - - 0.000000000000000000000000000000000000000000000000000001322 202.0
LYD2_k127_696048_27 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001405 190.0
LYD2_k127_696048_28 MafB19-like deaminase K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000006524 182.0
LYD2_k127_696048_29 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000002867 168.0
LYD2_k127_696048_3 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 566.0
LYD2_k127_696048_30 - - - - 0.00000000000000000000000000000000000000000003657 171.0
LYD2_k127_696048_31 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000003717 166.0
LYD2_k127_696048_32 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000006137 154.0
LYD2_k127_696048_33 Domain of unknown function (DUF4982) K01190 - 3.2.1.23 0.000000000000000000000000000000000000002807 151.0
LYD2_k127_696048_34 Domain of unknown function (DUF4180) - - - 0.000000000000000000000000000000002686 134.0
LYD2_k127_696048_35 Sigma factor regulatory protein, FecR PupR family - - - 0.0000000000000000000000000000001208 137.0
LYD2_k127_696048_36 Alternative locus ID - - - 0.0000000000000000000000000000002084 131.0
LYD2_k127_696048_37 Domain of unknown function (DUF4982) - - - 0.000000000000000009972 87.0
LYD2_k127_696048_38 - - - - 0.000001223 60.0
LYD2_k127_696048_4 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 396.0
LYD2_k127_696048_40 PFAM Amidohydrolase 2 - - - 0.0001944 45.0
LYD2_k127_696048_41 - - - - 0.0003162 49.0
LYD2_k127_696048_5 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 386.0
LYD2_k127_696048_6 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 405.0
LYD2_k127_696048_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 380.0
LYD2_k127_696048_8 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 374.0
LYD2_k127_696048_9 Elongation factor TS K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 355.0
LYD2_k127_7081_0 Cytochrome c552 K03385 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 1.7.2.2 7.21e-261 810.0
LYD2_k127_7081_1 Uroporphyrinogen decarboxylase (URO-D) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 531.0
LYD2_k127_7081_2 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 381.0
LYD2_k127_7081_3 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 317.0
LYD2_k127_7081_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 317.0
LYD2_k127_7081_5 PFAM NapC NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001164 282.0
LYD2_k127_7081_6 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000001603 141.0
LYD2_k127_7081_7 cation diffusion facilitator family transporter K14696 - - 0.000000000000000000001891 99.0
LYD2_k127_7081_8 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000003937 89.0
LYD2_k127_742877_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0 1108.0
LYD2_k127_742877_1 Pyruvate phosphate dikinase, PEP pyruvate binding domain - - - 2.128e-312 992.0
LYD2_k127_742877_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000008825 237.0
LYD2_k127_742877_11 membrane K06142 - - 0.000000000000000000000000000000000000000000000000000008623 194.0
LYD2_k127_742877_12 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000764 121.0
LYD2_k127_742877_13 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000009357 121.0
LYD2_k127_742877_14 Pas domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000617 123.0
LYD2_k127_742877_15 Inorganic polyphosphate kinase - - - 0.00000000000000000000000177 112.0
LYD2_k127_742877_16 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000002312 73.0
LYD2_k127_742877_2 Outer membrane protein assembly complex, YaeT protein K07277 - - 5.983e-265 841.0
LYD2_k127_742877_3 2-oxoacid acceptor oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 2.271e-264 827.0
LYD2_k127_742877_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 490.0
LYD2_k127_742877_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007762 346.0
LYD2_k127_742877_6 Putative undecaprenyl diphosphate synthase K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 313.0
LYD2_k127_742877_7 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 289.0
LYD2_k127_742877_8 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 289.0
LYD2_k127_742877_9 ATP-NAD kinase K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000002791 244.0
LYD2_k127_749362_0 Major Facilitator Superfamily - - - 3.142e-198 625.0
LYD2_k127_749362_1 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000008134 171.0
LYD2_k127_749362_2 Domain of unknown function (DUF4831) - - - 0.0000000000000000000000000000002604 137.0
LYD2_k127_749362_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000001301 80.0
LYD2_k127_749495_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 339.0
LYD2_k127_749495_1 Protein of unknown function (DUF3419) K13622 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003614 262.0
LYD2_k127_749495_3 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000485 118.0
LYD2_k127_749495_4 efflux transmembrane transporter activity K02004 - - 0.000000000000000000002683 105.0
LYD2_k127_749495_5 ABC transporter K02003 - - 0.00000000000000533 76.0
LYD2_k127_761098_0 Glycosyl transferases group 1 - - - 0.0 1043.0
LYD2_k127_761098_1 PAS fold - - - 2.76e-270 846.0
LYD2_k127_761098_10 - - - - 0.000000000000001573 77.0
LYD2_k127_761098_11 - - - - 0.0000000000006234 72.0
LYD2_k127_761098_12 PFAM GlcNAc-PI de-N-acetylase - - - 0.0000000001623 62.0
LYD2_k127_761098_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 5.106e-245 770.0
LYD2_k127_761098_3 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 558.0
LYD2_k127_761098_4 Permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 408.0
LYD2_k127_761098_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000002406 209.0
LYD2_k127_761098_6 - - - - 0.00000000000000000000000000000002158 129.0
LYD2_k127_761098_7 - - - - 0.000000000000000000000003576 106.0
LYD2_k127_761098_8 YtxH-like protein - - - 0.00000000000000000002118 93.0
LYD2_k127_763639_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 368.0
LYD2_k127_763639_1 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 347.0
LYD2_k127_763639_2 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000001626 226.0
LYD2_k127_763639_3 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000008399 218.0
LYD2_k127_763639_4 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000000001455 135.0
LYD2_k127_763639_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000004198 87.0
LYD2_k127_76668_0 TonB dependent receptor - - - 0.0 1354.0
LYD2_k127_76668_1 aconitate hydratase K01681 - 4.2.1.3 0.0 1078.0
LYD2_k127_76668_10 tetratricopeptide repeat - - - 0.000000007057 65.0
LYD2_k127_76668_11 TIR domain - - - 0.000007716 56.0
LYD2_k127_76668_12 Transposase IS200 like - - - 0.00006219 47.0
LYD2_k127_76668_2 cellulose binding - - - 5.606e-222 714.0
LYD2_k127_76668_3 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 4.322e-202 636.0
LYD2_k127_76668_4 Citrate synthase, C-terminal domain K01647,K01659 - 2.3.3.1,2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 590.0
LYD2_k127_76668_5 Pfam:SusD K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 542.0
LYD2_k127_76668_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 518.0
LYD2_k127_76668_7 Malate:quinone oxidoreductase (Mqo) K00116 - 1.1.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 505.0
LYD2_k127_76668_8 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 421.0
LYD2_k127_76668_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 363.0
LYD2_k127_76782_0 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0 1384.0
LYD2_k127_76782_1 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 5.444e-222 693.0
LYD2_k127_76782_10 Protein of unknown function (DUF2752) - - - 0.000002591 56.0
LYD2_k127_76782_2 TonB dependent receptor - - - 7.149e-210 674.0
LYD2_k127_76782_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 371.0
LYD2_k127_76782_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000007563 249.0
LYD2_k127_76782_5 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000004042 199.0
LYD2_k127_76782_6 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000001542 163.0
LYD2_k127_76782_7 Thioredoxin - - - 0.000000000000000000000000000000001553 136.0
LYD2_k127_76782_8 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000276 134.0
LYD2_k127_76782_9 - - - - 0.00000008204 61.0
LYD2_k127_7732_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.642e-227 711.0
LYD2_k127_7732_1 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 455.0
LYD2_k127_7732_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001414 277.0
LYD2_k127_7732_3 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000001221 176.0
LYD2_k127_7732_4 PFAM Nitroreductase - - - 0.0000000000004863 74.0
LYD2_k127_7732_5 - - - - 0.00002436 52.0
LYD2_k127_778409_0 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 593.0
LYD2_k127_778409_1 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.00000000000000000003385 94.0
LYD2_k127_778409_3 COG NOG14600 non supervised orthologous group - - - 0.00000001333 56.0
LYD2_k127_788662_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.053e-264 824.0
LYD2_k127_788662_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 4.557e-227 710.0
LYD2_k127_788662_2 Murein transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 306.0
LYD2_k127_788662_3 ABC transporter, ATP-binding protein K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 287.0
LYD2_k127_788662_4 ABC 3 transport family protein K02075,K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000024 287.0
LYD2_k127_788662_5 Zinc-uptake complex component A periplasmic K09815,K11707 - - 0.000000000000000000000000000000000000000000000000000000000000000009293 234.0
LYD2_k127_788662_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000003096 207.0
LYD2_k127_788662_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000891 137.0
LYD2_k127_797848_0 Fibronectin type 3 domain K21571 - - 0.00000000000000000000000000000000000000000000000000000000000000000004512 243.0
LYD2_k127_797848_1 Putative binding domain, N-terminal - - - 0.0000000000000000000000000000000000000000000000000003698 213.0
LYD2_k127_797848_2 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000139 185.0
LYD2_k127_797848_3 cellulose binding - - - 0.000000000000001655 92.0
LYD2_k127_797848_4 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000000002344 85.0
LYD2_k127_797848_5 chitin catabolic process - - - 0.0000006808 53.0
LYD2_k127_798762_0 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 0.0 1207.0
LYD2_k127_798762_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 6.831e-232 722.0
LYD2_k127_798762_2 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 8.864e-209 668.0
LYD2_k127_798762_3 Glycoside hydrolase, family 2, TIM barrel K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 519.0
LYD2_k127_798762_4 PFAM amino acid permease-associated region K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 421.0
LYD2_k127_798762_5 NOL1 NOP2 sun family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 422.0
LYD2_k127_798762_6 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 406.0
LYD2_k127_798762_7 amino acid K03294 - - 0.0000000000000000000000000000000000000007663 151.0
LYD2_k127_798762_8 radical SAM K06871 - - 0.0000000000000001177 80.0
LYD2_k127_808090_0 Amidohydrolase family - - - 4.077e-205 650.0
LYD2_k127_808090_1 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 488.0
LYD2_k127_808090_2 Magnesium chelatase, subunit ChlI - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 387.0
LYD2_k127_808090_3 bacteriocin export ABC transporter, lactococcin 972 group K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 359.0
LYD2_k127_808090_4 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000009343 224.0
LYD2_k127_808090_5 Fe-S-cluster oxidoreductase - - - 0.0000000000000000000000000001406 116.0
LYD2_k127_813328_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 1.171e-266 849.0
LYD2_k127_813328_1 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000948 181.0
LYD2_k127_813328_2 TIR domain - - - 0.00000002349 64.0
LYD2_k127_813328_3 TIR domain - - - 0.0000007329 63.0
LYD2_k127_841256_0 Peptidase C1-like family K01372 - 3.4.22.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 517.0
LYD2_k127_841256_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 366.0
LYD2_k127_841256_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007575 270.0
LYD2_k127_841256_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000003305 180.0
LYD2_k127_841256_4 Domain of unknown function (DUF4956) - - - 0.00000000000000000000000008332 115.0
LYD2_k127_841256_5 Domain of unknown function (DUF4342) - - - 0.000000000000001269 79.0
LYD2_k127_841256_6 DUF218 domain - - - 0.00000000002014 68.0
LYD2_k127_841256_7 Putative esterase - - - 0.00000003902 57.0
LYD2_k127_841256_8 Sporulation related domain - - - 0.0001799 49.0
LYD2_k127_841256_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0004585 44.0
LYD2_k127_843821_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 1218.0
LYD2_k127_843821_1 7TM diverse intracellular signalling - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 361.0
LYD2_k127_843821_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 312.0
LYD2_k127_843821_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000134 207.0
LYD2_k127_843821_4 COG5016 Pyruvate oxaloacetate carboxyltransferase K01960 - 6.4.1.1 0.000000000000000000000000000006098 122.0
LYD2_k127_846399_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 471.0
LYD2_k127_846399_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 466.0
LYD2_k127_846399_2 Putative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004492 291.0
LYD2_k127_846399_3 Bacterial periplasmic substrate-binding proteins K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000001969 238.0
LYD2_k127_846399_4 Mur ligase family, catalytic domain K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000001425 229.0
LYD2_k127_846399_5 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000001762 213.0
LYD2_k127_846399_6 Cell division protein K03589 - - 0.000000000000000000000000000000000000000004641 164.0
LYD2_k127_846399_7 ABC transporter, permease protein K02004 - - 0.0000000000000000000000000000000002553 139.0
LYD2_k127_862665_0 MacB-like periplasmic core domain K02004 - - 3.318e-297 931.0
LYD2_k127_862665_1 NLP P60 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 473.0
LYD2_k127_862665_2 Flavin-binding monooxygenase-like K07222 - - 0.000000000000000000000001768 103.0
LYD2_k127_862665_3 MFS/sugar transport protein - - - 0.0000000000000000000119 91.0
LYD2_k127_865317_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 4.807e-280 866.0
LYD2_k127_865317_1 Psort location CytoplasmicMembrane, score 10.00 - - - 1.064e-245 783.0
LYD2_k127_865317_10 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000005618 231.0
LYD2_k127_865317_11 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000001728 220.0
LYD2_k127_865317_12 - - - - 0.000000000000000000000000000000000000000000000000000001168 200.0
LYD2_k127_865317_13 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000001913 168.0
LYD2_k127_865317_14 metallopeptidase activity - - - 0.000000000000000002722 101.0
LYD2_k127_865317_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.567e-218 689.0
LYD2_k127_865317_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 472.0
LYD2_k127_865317_4 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 411.0
LYD2_k127_865317_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 346.0
LYD2_k127_865317_6 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 309.0
LYD2_k127_865317_7 Methyltransferase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 289.0
LYD2_k127_865317_8 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001188 283.0
LYD2_k127_865317_9 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006194 264.0
LYD2_k127_868027_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 520.0
LYD2_k127_868027_1 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000004394 222.0
LYD2_k127_868027_2 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000007472 110.0
LYD2_k127_876449_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 471.0
LYD2_k127_876449_1 Carbohydrate-binding family 9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001948 243.0
LYD2_k127_876449_2 DoxX - - - 0.00000000000000000000000000000000000004754 147.0
LYD2_k127_876449_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000001583 111.0
LYD2_k127_916042_0 Methionine synthase K00548 - 2.1.1.13 3.675e-318 993.0
LYD2_k127_916042_1 S-adenosylmethionine synthetase, C-terminal domain K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008403 567.0
LYD2_k127_916042_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 412.0
LYD2_k127_916042_3 Gliding motility protein GldA K01990 - - 0.0000004463 52.0
LYD2_k127_922666_0 LeuA allosteric (dimerisation) domain K01649 - 2.3.3.13 1.609e-250 780.0
LYD2_k127_922666_1 LeuA allosteric (dimerisation) domain K09011 - 2.3.1.182 9.335e-231 724.0
LYD2_k127_922666_10 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 312.0
LYD2_k127_922666_11 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 294.0
LYD2_k127_922666_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 284.0
LYD2_k127_922666_13 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003429 280.0
LYD2_k127_922666_14 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000007158 200.0
LYD2_k127_922666_15 Prephenate dehydratase K04518 - 4.2.1.51 0.00000462 48.0
LYD2_k127_922666_2 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 1.35e-218 686.0
LYD2_k127_922666_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 554.0
LYD2_k127_922666_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 544.0
LYD2_k127_922666_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 521.0
LYD2_k127_922666_6 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 512.0
LYD2_k127_922666_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817,K04720 - 2.6.1.9,4.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 406.0
LYD2_k127_922666_8 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 399.0
LYD2_k127_922666_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 351.0
LYD2_k127_936491_0 - - - - 1.757e-231 723.0
LYD2_k127_936491_1 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.000000000000000000000000000249 131.0
LYD2_k127_936491_2 Bacterial Ig-like domain - - - 0.000001917 61.0
LYD2_k127_941972_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 1.633e-265 842.0
LYD2_k127_941972_1 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 586.0
LYD2_k127_941972_10 Glycine cleavage system H protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 346.0
LYD2_k127_941972_11 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 343.0
LYD2_k127_941972_12 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 338.0
LYD2_k127_941972_13 cytochrome c biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 333.0
LYD2_k127_941972_14 phosphate ABC transporter, permease K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 323.0
LYD2_k127_941972_15 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 323.0
LYD2_k127_941972_16 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 318.0
LYD2_k127_941972_17 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624 304.0
LYD2_k127_941972_18 glucosylceramidase activity K01201 GO:0000323,GO:0003008,GO:0003674,GO:0003824,GO:0004348,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006677,GO:0006678,GO:0006680,GO:0006687,GO:0006807,GO:0006950,GO:0006986,GO:0007275,GO:0007568,GO:0007610,GO:0007611,GO:0007613,GO:0007626,GO:0008150,GO:0008152,GO:0008340,GO:0008344,GO:0009056,GO:0009987,GO:0010033,GO:0010259,GO:0016042,GO:0016787,GO:0016798,GO:0019377,GO:0019725,GO:0030149,GO:0030534,GO:0032501,GO:0032502,GO:0033554,GO:0034620,GO:0034641,GO:0035966,GO:0035967,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046466,GO:0046477,GO:0046479,GO:0046514,GO:0048856,GO:0050877,GO:0050890,GO:0050896,GO:0051716,GO:0060249,GO:0065007,GO:0065008,GO:0070050,GO:0070887,GO:0071310,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001491 287.0
LYD2_k127_941972_19 pyrroline-5-carboxylate reductase activity K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000145 267.0
LYD2_k127_941972_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 526.0
LYD2_k127_941972_20 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006712 278.0
LYD2_k127_941972_21 Metallo-beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000001103 228.0
LYD2_k127_941972_22 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000002469 202.0
LYD2_k127_941972_23 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000002941 190.0
LYD2_k127_941972_25 PFAM Lipid polyisoprenoid-binding, YceI-like - - - 0.0000000000000000000000000000000000000000000000005961 180.0
LYD2_k127_941972_26 DGC domain - - - 0.000000000000000000000000000000000000000000000004968 176.0
LYD2_k127_941972_27 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.0000000000000000000000000000000000000000000005965 183.0
LYD2_k127_941972_28 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000001268 157.0
LYD2_k127_941972_29 Transcriptional regulator - - - 0.0000000000000000000000000000000000000008758 151.0
LYD2_k127_941972_3 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 477.0
LYD2_k127_941972_30 DGC domain - - - 0.0000000000000000000000000000000000007311 142.0
LYD2_k127_941972_31 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000006374 133.0
LYD2_k127_941972_32 Cytochrome c - - - 0.0000000000000000000000000000000007615 143.0
LYD2_k127_941972_33 - - - - 0.0000000000000000000000000000004556 127.0
LYD2_k127_941972_34 4Fe-4S binding domain - - - 0.00000000000000000000000000002159 120.0
LYD2_k127_941972_35 tRNA_anti-like - - - 0.0000000000000000000000008212 109.0
LYD2_k127_941972_36 redox-active disulfide protein 2 - - - 0.00000000000000000000001366 102.0
LYD2_k127_941972_37 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000002363 101.0
LYD2_k127_941972_38 Outer membrane protein beta-barrel domain - - - 0.000000000000000000003739 103.0
LYD2_k127_941972_39 protein-disulfide reductase activity - - - 0.000000000000000006864 96.0
LYD2_k127_941972_4 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 462.0
LYD2_k127_941972_40 - - - - 0.000000000000000009085 84.0
LYD2_k127_941972_41 Cytochrome c - - - 0.000000000000004932 81.0
LYD2_k127_941972_42 Cytochrome c - - - 0.000000000001739 78.0
LYD2_k127_941972_5 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 446.0
LYD2_k127_941972_6 Cys/Met metabolism PLP-dependent enzyme K19715 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0043170,GO:0044238,GO:0071704,GO:1901576 2.6.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 445.0
LYD2_k127_941972_7 Mechanosensitive ion channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 424.0
LYD2_k127_941972_8 Bacterial extracellular solute-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 370.0
LYD2_k127_941972_9 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 357.0
LYD2_k127_96440_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 379.0
LYD2_k127_96440_1 abc transporter (atp-binding protein) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 336.0
LYD2_k127_96440_2 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 328.0
LYD2_k127_96440_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001172 278.0
LYD2_k127_96440_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006893 279.0
LYD2_k127_96440_5 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000001068 152.0
LYD2_k127_96440_6 Transport permease protein K01992 - - 0.00000000000000000000133 96.0
LYD2_k127_975711_0 Hsp90 protein K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002405 285.0
LYD2_k127_975711_1 nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000002099 210.0
LYD2_k127_975711_2 - - - - 0.0000000000000000000000000000000000006226 147.0
LYD2_k127_991368_0 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000004916 214.0
LYD2_k127_991368_1 Beta-lactamase - - - 0.000000000000000000169 91.0
LYD2_k127_991368_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000121 91.0