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Overview

ID MAG02046
Name LYD2_bin.7
Sample SMP0053
Taxonomy
Kingdom Bacteria
Phylum Myxococcota
Class Polyangia
Order Polyangiales
Family Polyangiaceae
Genus DASZVB01
Species
Assembly information
Completeness (%) 64.58
Contamination (%) 1.35
GC content (%) 67.0
N50 (bp) 8,613
Genome size (bp) 5,918,142

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4359

Gene name Description KEGG GOs EC E-value Score Sequence
LYD2_k127_100319_0 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 396.0
LYD2_k127_100319_1 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002491 299.0
LYD2_k127_100319_2 CBD_II K01181 - 3.2.1.8 0.00000000000001356 85.0
LYD2_k127_1012143_0 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 323.0
LYD2_k127_1012143_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000001374 139.0
LYD2_k127_1026564_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0 1215.0
LYD2_k127_1026564_1 Tetratricopeptide repeat - - - 0.00000000000001298 83.0
LYD2_k127_1027954_0 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 520.0
LYD2_k127_1027954_1 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 484.0
LYD2_k127_1027954_2 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000005622 186.0
LYD2_k127_1027954_3 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.00000000000000000000000000000000004757 147.0
LYD2_k127_1027954_4 Protein of unknown function (DUF3343) - GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.00000000000000004404 83.0
LYD2_k127_1036093_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.013e-257 804.0
LYD2_k127_1036093_1 PFAM Rh family protein ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 587.0
LYD2_k127_1036093_10 Roadblock/LC7 domain K07131 - - 0.0003582 51.0
LYD2_k127_1036093_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 346.0
LYD2_k127_1036093_3 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000009888 142.0
LYD2_k127_1036093_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000005567 140.0
LYD2_k127_1036093_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000001639 147.0
LYD2_k127_1036093_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000009105 138.0
LYD2_k127_1036093_8 heat shock protein binding K03686 - - 0.00000000000008958 83.0
LYD2_k127_1036093_9 Domain of unknown function (DUF4388) - - - 0.0000000005762 70.0
LYD2_k127_1039241_0 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 353.0
LYD2_k127_1039241_1 Methyltransferase type 11 K03892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001011 286.0
LYD2_k127_1039241_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000002469 212.0
LYD2_k127_1039241_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000001128 188.0
LYD2_k127_1039241_4 Protein of unknown function (DUF3089) - - - 0.0000000000000000000000000000000000000004194 159.0
LYD2_k127_1039241_5 Glutaredoxin - - - 0.0000000000000000000000000000000000001516 146.0
LYD2_k127_1039241_6 radical SAM domain protein K22227 - - 0.00000000000000000000003333 112.0
LYD2_k127_1039241_7 Carbohydrate family 9 binding domain-like - - - 0.00003397 56.0
LYD2_k127_1040283_0 PFAM N-acetylneuraminic acid synthase, N-terminal K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 415.0
LYD2_k127_1040283_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000006173 237.0
LYD2_k127_1040283_2 Xylose isomerase-like TIM barrel K03079 - 5.1.3.22 0.00000000000000000000000000000000000000000002857 172.0
LYD2_k127_1040283_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000005479 132.0
LYD2_k127_1049563_0 Acts as a magnesium transporter K06213 - - 7.295e-194 615.0
LYD2_k127_1049563_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 561.0
LYD2_k127_1049563_10 activator of Hsp90 ATPase 1 family protein - - - 0.0000000000000000000000000000003137 130.0
LYD2_k127_1049563_12 - - - - 0.000000000000000000001054 99.0
LYD2_k127_1049563_13 - - - - 0.00000000000002056 76.0
LYD2_k127_1049563_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 499.0
LYD2_k127_1049563_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 451.0
LYD2_k127_1049563_4 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 332.0
LYD2_k127_1049563_5 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000001316 232.0
LYD2_k127_1049563_6 MafB19-like deaminase K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000144 192.0
LYD2_k127_1049563_8 - - - - 0.00000000000000000000000000000000000000002467 169.0
LYD2_k127_1049563_9 PFAM NAD-dependent epimerase dehydratase K01710,K01784,K02473,K08678 - 4.1.1.35,4.2.1.46,5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000558 146.0
LYD2_k127_1052375_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 597.0
LYD2_k127_1052375_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004546 276.0
LYD2_k127_1052375_2 SpoVR like protein K06415 - - 0.0000000000000000000000000000000000000000000001872 169.0
LYD2_k127_1052375_3 NUDIX domain - - - 0.00000000008113 68.0
LYD2_k127_1053175_0 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 7.736e-199 631.0
LYD2_k127_1053175_1 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002527 262.0
LYD2_k127_1053175_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000002616 193.0
LYD2_k127_1061029_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 3.629e-197 627.0
LYD2_k127_1061029_1 May be the GTPase, regulating ATP sulfurylase activity K00955 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 548.0
LYD2_k127_1061029_2 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 489.0
LYD2_k127_1061029_3 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 428.0
LYD2_k127_1061029_4 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 291.0
LYD2_k127_1061029_5 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000004432 228.0
LYD2_k127_1061029_6 cheY-homologous receiver domain K07657 - - 0.000000000000000000000000000000000000000000002182 173.0
LYD2_k127_1061029_8 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00008835 54.0
LYD2_k127_1067822_0 Zinc-dependent metalloprotease - - - 0.000000000000000000000000000000000000000000000105 181.0
LYD2_k127_1067822_1 - - - - 0.00000000000000000000000000000000000005874 159.0
LYD2_k127_1067822_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000001371 125.0
LYD2_k127_1073841_0 Histidine kinase K07716 - 2.7.13.3 2.058e-208 669.0
LYD2_k127_1073841_1 Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 407.0
LYD2_k127_1073841_10 - - - - 0.000000000004838 70.0
LYD2_k127_1073841_12 Beta-L-arabinofuranosidase, GH127 - - - 0.000003477 59.0
LYD2_k127_1073841_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0005941 48.0
LYD2_k127_1073841_2 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 384.0
LYD2_k127_1073841_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003811 279.0
LYD2_k127_1073841_4 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001742 247.0
LYD2_k127_1073841_5 Integrase - - - 0.0000000000000000000000000000000000000000000000000000019 203.0
LYD2_k127_1073841_6 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000002389 196.0
LYD2_k127_1073841_7 Integrase core domain - - - 0.000000000000000000000000000000004827 130.0
LYD2_k127_1073841_8 transposition K07497 - - 0.0000000000001532 76.0
LYD2_k127_1073841_9 Protein of unknown function (DUF2892) - - - 0.000000000001425 70.0
LYD2_k127_1089055_0 negative regulation of transforming growth factor beta1 production K03068,K06261,K06593,K08867,K09187,K12488,K13738,K14972,K20050,K20371 GO:0000003,GO:0001654,GO:0001667,GO:0001745,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007423,GO:0008150,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010564,GO:0010631,GO:0016020,GO:0016043,GO:0016477,GO:0017124,GO:0019904,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030029,GO:0030036,GO:0030100,GO:0030154,GO:0030496,GO:0030707,GO:0030855,GO:0032153,GO:0032154,GO:0032155,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032794,GO:0032879,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0040011,GO:0043062,GO:0043063,GO:0044085,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044459,GO:0044464,GO:0044703,GO:0045171,GO:0045177,GO:0045179,GO:0045216,GO:0045807,GO:0048259,GO:0048260,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048592,GO:0048609,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050839,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051302,GO:0051674,GO:0051704,GO:0051726,GO:0060429,GO:0060627,GO:0065007,GO:0071840,GO:0071944,GO:0090130,GO:0090132,GO:0090596,GO:0097435,GO:0098590,GO:0099568,GO:0099738 2.1.1.43,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 538.0
LYD2_k127_1089055_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 455.0
LYD2_k127_1089055_2 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000002495 210.0
LYD2_k127_1089055_3 Domain of unknown function (DUF4336) - - - 0.000000000000000000000000000000000000000000002665 178.0
LYD2_k127_1089055_4 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0002502 51.0
LYD2_k127_1090643_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 395.0
LYD2_k127_1090643_1 ATPase, AAA superfamily K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 391.0
LYD2_k127_1090643_2 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000001114 205.0
LYD2_k127_1090643_3 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000002101 191.0
LYD2_k127_1090643_4 transcriptional regulator - - - 0.00000000000000000000000000000000000000000001404 173.0
LYD2_k127_1092993_0 Cysteine desulfurase activator complex subunit SufB K09014 - - 1.094e-214 671.0
LYD2_k127_1092993_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 6.02e-199 650.0
LYD2_k127_1092993_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000002101 126.0
LYD2_k127_1092993_12 Putative metal-binding motif - - - 0.0000000000000000000000000001167 136.0
LYD2_k127_1092993_13 protein kinase activity - - - 0.00000000000000002142 95.0
LYD2_k127_1092993_14 transcriptional regulator - - - 0.0000000000444 73.0
LYD2_k127_1092993_15 Mortierella verticillata NRRL 6337 - - - 0.0000000006096 73.0
LYD2_k127_1092993_16 lipolytic protein G-D-S-L family - - - 0.00000004722 64.0
LYD2_k127_1092993_2 guanyl-nucleotide exchange factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 587.0
LYD2_k127_1092993_3 Putative metal-binding motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 545.0
LYD2_k127_1092993_4 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 491.0
LYD2_k127_1092993_5 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 423.0
LYD2_k127_1092993_6 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001181 284.0
LYD2_k127_1092993_7 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000000000000000000000000000000001778 228.0
LYD2_k127_1092993_8 Outer mitochondrial membrane transport complex protein - - - 0.00000000000000000000000000000000000000000000000000002667 197.0
LYD2_k127_1092993_9 Transcriptional regulator - - - 0.0000000000000000000000000000000005363 135.0
LYD2_k127_109899_0 Transcriptional regulator - - - 1.936e-198 640.0
LYD2_k127_109899_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566 509.0
LYD2_k127_109899_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 479.0
LYD2_k127_109899_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 406.0
LYD2_k127_109899_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008204 402.0
LYD2_k127_109899_5 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 342.0
LYD2_k127_109899_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 286.0
LYD2_k127_1111675_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 8.71e-229 721.0
LYD2_k127_1111675_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 7.638e-205 642.0
LYD2_k127_1111675_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 550.0
LYD2_k127_1111675_4 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 312.0
LYD2_k127_1111675_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 297.0
LYD2_k127_1111675_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002718 256.0
LYD2_k127_1135481_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 2.632e-293 930.0
LYD2_k127_1135481_1 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 364.0
LYD2_k127_1135481_2 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000145 266.0
LYD2_k127_1135481_3 Member of the two-component regulatory system kdpD kdpE involved in the regulation of the kdp operon K02483,K07667 - - 0.00000000000000000000000000000000000000000000000000478 186.0
LYD2_k127_1135481_4 Evidence 4 Homologs of previously reported genes of K15977 - - 0.000000000000000000000000000000000000000000005949 170.0
LYD2_k127_1135481_5 Universal stress protein family - - - 0.0000000005482 69.0
LYD2_k127_1138675_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 440.0
LYD2_k127_1138675_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 431.0
LYD2_k127_1138675_2 Type II IV secretion system protein K02283,K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 398.0
LYD2_k127_1138675_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000001609 221.0
LYD2_k127_1138675_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000000000000000001509 107.0
LYD2_k127_1138675_7 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000001487 56.0
LYD2_k127_1141695_0 Glycosyl transferase family 21 K11936 - - 1.432e-224 746.0
LYD2_k127_1141695_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001137 294.0
LYD2_k127_1141695_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000001189 212.0
LYD2_k127_1141695_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000006632 105.0
LYD2_k127_1141695_4 Acetyltransferase (GNAT) family - - - 0.00000000000005757 77.0
LYD2_k127_115985_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 2336.0
LYD2_k127_115985_1 - - - - 0.0000000000000000000000000000000000802 145.0
LYD2_k127_115985_2 Universal stress protein - - - 0.0000000000000000000000000000001306 138.0
LYD2_k127_115985_3 High confidence in function and specificity - - - 0.00000000000000004523 85.0
LYD2_k127_115985_4 - - - - 0.0000000000001684 73.0
LYD2_k127_115985_5 BPTI/Kunitz family of serine protease inhibitors. - - - 0.00000000005562 72.0
LYD2_k127_1168094_0 B12 binding domain - - - 1.18e-232 727.0
LYD2_k127_1168094_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 468.0
LYD2_k127_1170620_0 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 366.0
LYD2_k127_1170620_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 293.0
LYD2_k127_1170620_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001119 207.0
LYD2_k127_1170620_3 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000004131 165.0
LYD2_k127_1176987_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000001416 256.0
LYD2_k127_1176987_1 COG0517, FOG CBS domain - - - 0.0000000000000000000000000000000008676 143.0
LYD2_k127_1176987_2 Universal stress protein - - - 0.00000000000000000000000009793 112.0
LYD2_k127_1176987_3 PFAM Hemerythrin HHE cation binding domain protein - - - 0.000000000000000001974 96.0
LYD2_k127_1176987_4 Universal stress protein - - - 0.000000000000000003109 93.0
LYD2_k127_1187389_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 586.0
LYD2_k127_1187389_1 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 428.0
LYD2_k127_1187389_2 Rhomboid family K07059 - - 0.000001351 52.0
LYD2_k127_1205660_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 453.0
LYD2_k127_1205660_1 Repeat of Unknown Function (DUF347) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 394.0
LYD2_k127_1205660_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 359.0
LYD2_k127_1205660_3 OsmC-like protein - - - 0.0000000000000000000000000000000000001202 145.0
LYD2_k127_1211133_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 426.0
LYD2_k127_1211133_1 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 420.0
LYD2_k127_1211133_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001657 217.0
LYD2_k127_1211133_3 - - - - 0.000000000007467 77.0
LYD2_k127_1212095_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001,K14446 - 1.1.1.1,1.3.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 606.0
LYD2_k127_1212095_1 COG1960 Acyl-CoA dehydrogenases K14448 - 1.3.8.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 565.0
LYD2_k127_1212095_2 COG2030 Acyl dehydratase K14449 - 4.2.1.148 0.00000000000000000000000000000000000000000000000000000000000003534 220.0
LYD2_k127_1212537_0 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 479.0
LYD2_k127_1212537_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 413.0
LYD2_k127_1212537_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - GO:0003674,GO:0003824,GO:0004303,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006066,GO:0006629,GO:0007568,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0014070,GO:0016125,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0018812,GO:0030283,GO:0032502,GO:0033764,GO:0033993,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044594,GO:0046983,GO:0048545,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071310,GO:0071407,GO:0071704,GO:1901360,GO:1901615,GO:1902652 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 330.0
LYD2_k127_1212537_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005211 284.0
LYD2_k127_1212537_4 LPPG Fo 2-phospho-L-lactate transferase K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000004888 252.0
LYD2_k127_1212537_5 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.00000000000001167 86.0
LYD2_k127_1212810_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 396.0
LYD2_k127_1212810_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000102 243.0
LYD2_k127_1212810_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000001367 234.0
LYD2_k127_1212810_3 Protein of unknown function (DUF533) K11962 - - 0.000000000000000000001626 99.0
LYD2_k127_1212810_4 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.0000000000007176 80.0
LYD2_k127_1222885_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 535.0
LYD2_k127_1222885_2 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009621 266.0
LYD2_k127_1222885_3 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000001262 248.0
LYD2_k127_1222885_4 SpoU rRNA Methylase family K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000008468 233.0
LYD2_k127_1222885_5 - - - - 0.000000000000000000000000000000000000000000121 171.0
LYD2_k127_1222885_6 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000012 150.0
LYD2_k127_1222885_7 transcriptional regulator - - - 0.00000000000000000000000000000000001238 145.0
LYD2_k127_1223253_0 Belongs to the FtsK SpoIIIE SftA family K03466 - - 6.937e-269 854.0
LYD2_k127_1223253_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 479.0
LYD2_k127_1223253_2 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 344.0
LYD2_k127_1223253_3 deoxyhypusine monooxygenase activity K01256,K02563,K08776,K12132 - 2.4.1.227,2.7.11.1,3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 345.0
LYD2_k127_1223253_4 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 311.0
LYD2_k127_1223253_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 291.0
LYD2_k127_1223253_7 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000001645 141.0
LYD2_k127_1224965_0 histone H2A K63-linked ubiquitination K03404,K07114 - 6.6.1.1 7.528e-235 745.0
LYD2_k127_1224965_1 amine dehydrogenase activity - - - 1.838e-214 703.0
LYD2_k127_1224965_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000002087 162.0
LYD2_k127_1224965_3 Belongs to the peptidase S8 family - - - 0.00000000000000000000000006847 111.0
LYD2_k127_1224965_4 histone H2A K63-linked ubiquitination - - - 0.00000000000000000009254 99.0
LYD2_k127_1224965_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0008150,GO:0009893,GO:0010468,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0044087,GO:0044089,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090070,GO:2000232,GO:2000234 - 0.0001028 45.0
LYD2_k127_1241275_0 Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 524.0
LYD2_k127_1241275_1 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 358.0
LYD2_k127_1241275_11 calcium- and calmodulin-responsive adenylate cyclase activity K01113 - 3.1.3.1 0.00009378 55.0
LYD2_k127_1241275_2 acetylesterase activity K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 307.0
LYD2_k127_1241275_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004813 251.0
LYD2_k127_1241275_5 HDOD domain - - - 0.0000000000000000000000000000000000000000000000002819 187.0
LYD2_k127_1241275_6 PFAM PilT protein domain protein - - - 0.00000000000000000000000000000001224 131.0
LYD2_k127_1241275_7 Amidohydrolase K10221 - 3.1.1.57 0.0000000000000000000001351 114.0
LYD2_k127_1241275_9 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000002256 81.0
LYD2_k127_1249497_0 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000001183 136.0
LYD2_k127_1249497_1 Putative metal-binding motif - - - 0.00000000413 70.0
LYD2_k127_1249497_2 6-O-methylguanine DNA methyltransferase, DNA binding domain - - - 0.00004984 51.0
LYD2_k127_1252835_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 360.0
LYD2_k127_1252835_1 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000031 177.0
LYD2_k127_1252835_2 Alpha/beta hydrolase family K21104 - 3.1.1.101 0.00000000000000000000000000008959 126.0
LYD2_k127_1252835_3 PIN domain - - - 0.00000002198 61.0
LYD2_k127_1254894_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 307.0
LYD2_k127_1254894_1 cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002221 282.0
LYD2_k127_1254894_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000005625 250.0
LYD2_k127_1254894_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000001954 170.0
LYD2_k127_1254894_5 Outer membrane efflux protein K15725 - - 0.000000005623 68.0
LYD2_k127_1262639_0 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006667 258.0
LYD2_k127_1262639_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000001607 203.0
LYD2_k127_1262639_2 AcrB/AcrD/AcrF family K07787,K15726 - - 0.00000000000000000000000000000000000000000156 162.0
LYD2_k127_1262639_3 Nudix hydrolase - - - 0.00000000000000002305 89.0
LYD2_k127_1262639_4 Cytochrome c - - - 0.0000000000006733 75.0
LYD2_k127_1267237_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000005267 233.0
LYD2_k127_1267237_1 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000007869 141.0
LYD2_k127_1267237_2 Belongs to the peptidase S8 family - - - 0.000000000003197 80.0
LYD2_k127_128283_0 collagen metabolic process K08677 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 337.0
LYD2_k127_128283_1 Domain of unknown function (DUF3473) - - - 0.000000000000000000000000000000000000000000000005241 179.0
LYD2_k127_128283_2 Adenylate guanylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000002542 175.0
LYD2_k127_128283_3 Fatty acid desaturase - - - 0.000000000000000000000000000000000000001281 161.0
LYD2_k127_128283_4 COG0517, FOG CBS domain - - - 0.0000000000000000000001185 113.0
LYD2_k127_128283_5 CBS domain K04767,K07168,K07182 - - 0.000000000000000000002597 103.0
LYD2_k127_1285086_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000002242 269.0
LYD2_k127_1285086_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000472 184.0
LYD2_k127_1285086_2 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000001567 171.0
LYD2_k127_1285086_3 Transposase IS66 family K07484 - - 0.0000000000000000000002368 98.0
LYD2_k127_1285086_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000001011 66.0
LYD2_k127_1285086_5 Bacterial transcriptional repressor C-terminal - - - 0.00000005057 63.0
LYD2_k127_1285086_6 Bacterial transcriptional repressor C-terminal - - - 0.000002641 51.0
LYD2_k127_1294296_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1116.0
LYD2_k127_1294296_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001157 258.0
LYD2_k127_1294296_2 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000782 235.0
LYD2_k127_1294296_3 acetyltransferase - - - 0.000000000000000000000000000000000006084 142.0
LYD2_k127_1294296_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000001598 127.0
LYD2_k127_1294296_5 FecR protein - - - 0.0000000000000000000000004478 121.0
LYD2_k127_1294296_6 Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue - - - 0.0002999 44.0
LYD2_k127_1303061_0 Aldehyde dehydrogenase family - - - 3.2e-211 669.0
LYD2_k127_1303061_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 575.0
LYD2_k127_1303061_11 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.00000000000000000000000000000000001028 151.0
LYD2_k127_1303061_12 - - - - 0.00000000000000000000000000000000001466 144.0
LYD2_k127_1303061_14 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000001667 132.0
LYD2_k127_1303061_16 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000004325 105.0
LYD2_k127_1303061_17 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000000000001808 78.0
LYD2_k127_1303061_19 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000008982 75.0
LYD2_k127_1303061_2 COG0277 FAD FMN-containing dehydrogenases K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 482.0
LYD2_k127_1303061_20 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000004414 72.0
LYD2_k127_1303061_21 PFAM Methyltransferase type 11 - - - 0.00000007837 63.0
LYD2_k127_1303061_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 418.0
LYD2_k127_1303061_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 396.0
LYD2_k127_1303061_5 glycosyl transferase group 1 K12995 - 2.4.1.348 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 340.0
LYD2_k127_1303061_6 Sir2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 316.0
LYD2_k127_1303061_7 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 325.0
LYD2_k127_1303061_8 - K06921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001692 286.0
LYD2_k127_1303061_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000181 209.0
LYD2_k127_1317802_0 PFAM NnrS family protein K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006333 291.0
LYD2_k127_1317802_1 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000294 250.0
LYD2_k127_1317802_2 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000003398 146.0
LYD2_k127_1317802_3 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.00000000000000000000000000000000000007731 147.0
LYD2_k127_1317802_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000003378 143.0
LYD2_k127_1317802_5 Protein of unknown function (DUF3079) - - - 0.00000000000000000002749 96.0
LYD2_k127_1317802_6 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0000008334 55.0
LYD2_k127_1323370_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 497.0
LYD2_k127_1323370_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000001269 222.0
LYD2_k127_1328995_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 466.0
LYD2_k127_1328995_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 442.0
LYD2_k127_1328995_2 DbpA RNA binding domain K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 447.0
LYD2_k127_1328995_3 Spermidine synthase - - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
LYD2_k127_1328995_4 protein conserved in bacteria K09983 - - 0.0000000000000000000000000000000000000000000000000002692 190.0
LYD2_k127_1328995_5 PFAM regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000001314 162.0
LYD2_k127_1328995_7 Pfam:Methyltransf_26 - - - 0.00000519 49.0
LYD2_k127_1328995_8 low-density lipoprotein particle receptor activity K19013,K19020 GO:0003674,GO:0003824,GO:0005041,GO:0005044,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0006810,GO:0006897,GO:0006898,GO:0006950,GO:0006952,GO:0007154,GO:0007155,GO:0007267,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0012506,GO:0015035,GO:0015036,GO:0016020,GO:0016021,GO:0016192,GO:0016491,GO:0016525,GO:0016667,GO:0022603,GO:0022610,GO:0023052,GO:0030139,GO:0030169,GO:0030228,GO:0030659,GO:0030666,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0038024,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044877,GO:0045765,GO:0048519,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051704,GO:0051707,GO:0055114,GO:0065007,GO:0071813,GO:0071814,GO:0071944,GO:0097708,GO:0098542,GO:0098588,GO:0098657,GO:0098805,GO:1901342,GO:1901343,GO:2000026,GO:2000181 - 0.0006051 53.0
LYD2_k127_1337424_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 3.536e-267 853.0
LYD2_k127_1337424_1 symporter activity - - - 1.442e-219 698.0
LYD2_k127_1337424_2 phosphorelay signal transduction system K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 481.0
LYD2_k127_1337424_4 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000011 299.0
LYD2_k127_1337424_5 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000004644 216.0
LYD2_k127_1337424_6 - - - - 0.000000000000000000000000000000000000000003749 166.0
LYD2_k127_1337424_8 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000002228 68.0
LYD2_k127_1337424_9 TPR repeat - - - 0.00001439 57.0
LYD2_k127_1348168_0 PFAM Glycosyl transferase, group 1 - - - 3.103e-279 882.0
LYD2_k127_1348168_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.774e-265 825.0
LYD2_k127_1348168_10 - - - - 0.0007567 47.0
LYD2_k127_1348168_2 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 485.0
LYD2_k127_1348168_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 489.0
LYD2_k127_1348168_4 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009759 298.0
LYD2_k127_1348168_5 MAPEG family - - - 0.0000000000000000000000000000000000000000002385 166.0
LYD2_k127_1348168_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000001873 147.0
LYD2_k127_1390674_0 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 480.0
LYD2_k127_1390674_1 GHKL domain K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 464.0
LYD2_k127_1390674_2 Transcriptional regulatory protein, C terminal K07663,K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 316.0
LYD2_k127_1390674_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 285.0
LYD2_k127_1390674_4 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009833 278.0
LYD2_k127_1390674_5 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000000004227 169.0
LYD2_k127_1390674_6 SPFH domain / Band 7 family - - - 0.0000000000000000000000000007397 123.0
LYD2_k127_1401673_0 Belongs to the glycosyl hydrolase 31 family K01811,K15922 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016787,GO:0016798,GO:0019637,GO:0034308,GO:0042180,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0061720,GO:0071704,GO:1901135,GO:1901136,GO:1901575,GO:1901615,GO:1902776,GO:1902777,GO:1990929 3.2.1.177,3.2.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 469.0
LYD2_k127_1401673_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000002555 227.0
LYD2_k127_1401673_2 Transcriptional regulator - - - 0.00000000000000000000000946 109.0
LYD2_k127_1407805_0 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01666,K18365 - 4.1.3.39,4.1.3.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 545.0
LYD2_k127_1407805_1 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K18366 - 1.2.1.10,1.2.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 470.0
LYD2_k127_1407805_10 peptidyl-prolyl cis-trans isomerase activity K03769,K03770,K07533 - 5.2.1.8 0.00000000000000001791 97.0
LYD2_k127_1407805_11 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000001066 70.0
LYD2_k127_1407805_12 membrane protein involved in D-alanine export K19294 - - 0.000000004597 68.0
LYD2_k127_1407805_13 Worm-specific repeat type 1 - - - 0.00000002247 68.0
LYD2_k127_1407805_14 Endonuclease/Exonuclease/phosphatase family K12351 GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0004620,GO:0004629,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005773,GO:0005783,GO:0005886,GO:0006629,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006950,GO:0006970,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009628,GO:0009651,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0019867,GO:0030148,GO:0030149,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032995,GO:0034641,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046466,GO:0046467,GO:0046513,GO:0046519,GO:0046521,GO:0050789,GO:0050794,GO:0050896,GO:0052712,GO:0052713,GO:0052714,GO:0065007,GO:0071704,GO:0071944,GO:0097164,GO:0098573,GO:0098588,GO:0098805,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1903338 3.1.4.12 0.0004212 52.0
LYD2_k127_1407805_2 Cytochrome P450 K05525,K20497 - 1.14.13.151,1.14.15.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 473.0
LYD2_k127_1407805_3 acyl-CoA dehydrogenase K16047 - 1.14.14.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 421.0
LYD2_k127_1407805_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 415.0
LYD2_k127_1407805_5 Fumarylacetoacetate (FAA) hydrolase family K18364 - 4.2.1.132,4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 381.0
LYD2_k127_1407805_6 Serine aminopeptidase, S33 K16050 - 3.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 309.0
LYD2_k127_1407805_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004228 258.0
LYD2_k127_1407805_8 Enoyl-CoA hydratase K01692,K18383 - 4.1.2.41,4.2.1.101,4.2.1.17 0.000000000000000000000000000000000000000000000000001704 186.0
LYD2_k127_1407805_9 nuclease activity - - - 0.000000000000000000000000000003397 130.0
LYD2_k127_1409322_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 518.0
LYD2_k127_1409322_1 FeS assembly protein SufD K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002918 265.0
LYD2_k127_1409322_2 SUF system FeS assembly protein K04488 - - 0.0000000000000000000000000000000000000000000000005779 191.0
LYD2_k127_1409322_3 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000000000001334 136.0
LYD2_k127_1409322_4 WHG domain - - - 0.00000000000000000000000000000004201 136.0
LYD2_k127_1409322_5 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000005499 121.0
LYD2_k127_1409322_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000004429 125.0
LYD2_k127_1409322_7 peptidyl-tyrosine sulfation - - - 0.000000000000000004542 97.0
LYD2_k127_1413271_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 370.0
LYD2_k127_1413271_1 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001617 258.0
LYD2_k127_1413271_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000005554 256.0
LYD2_k127_1413271_3 - - - - 0.00000000000000000000000000000000000000000000000008071 189.0
LYD2_k127_1413271_4 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000007847 133.0
LYD2_k127_1413271_5 PIN domain - - - 0.0000000000000000000003536 105.0
LYD2_k127_1413271_6 response regulator - - - 0.000001061 60.0
LYD2_k127_1427184_0 Bacterial transcriptional activator domain - - - 8.472e-209 690.0
LYD2_k127_1427184_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 505.0
LYD2_k127_1427184_2 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 418.0
LYD2_k127_1427184_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 330.0
LYD2_k127_1427184_4 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005665 273.0
LYD2_k127_1427184_5 of the double-stranded beta helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001033 260.0
LYD2_k127_1427184_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001834 241.0
LYD2_k127_1427184_7 Alpha/beta hydrolase family - - - 0.00000000000000000000006992 103.0
LYD2_k127_1427184_8 Sulfatase-modifying factor enzyme 1 K12132 - 2.7.11.1 0.000000000000000003471 87.0
LYD2_k127_1427184_9 AAA ATPase domain - - - 0.000000000002001 74.0
LYD2_k127_1427911_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 351.0
LYD2_k127_1427911_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008548 244.0
LYD2_k127_1427911_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000002868 197.0
LYD2_k127_1429269_0 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008038 269.0
LYD2_k127_1429269_1 Pfam Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000005683 213.0
LYD2_k127_1429269_10 Pectate lyase K01728,K21606 - 3.2.1.202,4.2.2.2 0.0000000003068 64.0
LYD2_k127_1429269_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000001125 181.0
LYD2_k127_1429269_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000002509 194.0
LYD2_k127_1429269_4 Transposase IS66 family K07484 - - 0.0000000000000000000000000000000003106 140.0
LYD2_k127_1429269_5 ABC transporter, ATP-binding protein - - - 0.00000000000000000000000000000001863 132.0
LYD2_k127_1429269_6 PFAM Integrase catalytic - - - 0.00000000000000000000000000002679 117.0
LYD2_k127_1429269_7 DoxX-like family - - - 0.00000000000000000000002513 111.0
LYD2_k127_1429269_8 Peptidase family M23 - - - 0.00000000000003711 76.0
LYD2_k127_1429269_9 Peptidase family M23 - - - 0.0000000000006021 73.0
LYD2_k127_1433649_0 Short-chain dehydrogenase reductase sdr K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 306.0
LYD2_k127_1433649_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002514 269.0
LYD2_k127_1433649_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000002292 229.0
LYD2_k127_1433649_3 pfam nudix - - - 0.0000000000000000000000000000000006061 138.0
LYD2_k127_1433649_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 GO:0005575,GO:0005576,GO:0008150,GO:0040007 3.5.4.25,4.1.99.12 0.0000000000000000001225 99.0
LYD2_k127_1433649_5 Pectate lyase K01728,K21606 - 3.2.1.202,4.2.2.2 0.0000000000000000001764 97.0
LYD2_k127_1433649_6 Cytochrome c class I K02030 - - 0.00000000001723 72.0
LYD2_k127_1434366_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 341.0
LYD2_k127_1434366_1 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000141 246.0
LYD2_k127_1434366_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000002627 212.0
LYD2_k127_1434366_3 peptidyl-prolyl cis-trans isomerase activity K02597,K03769,K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000166 209.0
LYD2_k127_1434366_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.000000000000000001469 90.0
LYD2_k127_1434366_7 tryptophanyl-tRNA aminoacylation K01867,K02946,K13346 GO:0000166,GO:0000959,GO:0001568,GO:0001570,GO:0001944,GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009653,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030154,GO:0030554,GO:0031974,GO:0032501,GO:0032502,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035239,GO:0035295,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048514,GO:0048731,GO:0048856,GO:0048869,GO:0070013,GO:0070127,GO:0070183,GO:0071704,GO:0071944,GO:0072358,GO:0072359,GO:0090304,GO:0097159,GO:0097367,GO:0140053,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000002445 78.0
LYD2_k127_1434366_8 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0001477 46.0
LYD2_k127_1436183_0 Methionine synthase K00548 - 2.1.1.13 0.0 2205.0
LYD2_k127_1436183_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 474.0
LYD2_k127_1436369_0 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 341.0
LYD2_k127_1436369_1 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000002267 271.0
LYD2_k127_1436369_10 Sortilin, neurotensin receptor 3, - - - 0.00000000003215 77.0
LYD2_k127_1436369_11 SnoaL-like domain - - - 0.00005417 53.0
LYD2_k127_1436369_2 sensory box sensor histidine kinase VC1084 imported - - - 0.000000000000000000000000000000000000000000000000000000000000002014 236.0
LYD2_k127_1436369_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000002155 223.0
LYD2_k127_1436369_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000001905 155.0
LYD2_k127_1436369_5 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000003563 154.0
LYD2_k127_1436369_6 Tetratricopeptide repeat - - - 0.0000000000000000003582 100.0
LYD2_k127_1436369_7 Transcriptional regulator - - - 0.00000000000000005967 87.0
LYD2_k127_1444595_0 Fe-S oxidoreductases K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 467.0
LYD2_k127_1444595_1 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 462.0
LYD2_k127_1444595_2 Aldose 1-epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 316.0
LYD2_k127_1444595_3 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 319.0
LYD2_k127_1444595_4 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000001974 160.0
LYD2_k127_1452124_0 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 481.0
LYD2_k127_1452124_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 440.0
LYD2_k127_1452124_2 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001609 280.0
LYD2_k127_1460390_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051,K15576,K22067 - - 4.952e-222 696.0
LYD2_k127_1460390_1 Fe-S oxidoreductases K22226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 480.0
LYD2_k127_1460390_2 Binding-protein-dependent transport system inner membrane component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 398.0
LYD2_k127_1460390_4 ABC transporter K02049,K15578,K15579 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 336.0
LYD2_k127_1460390_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000004532 239.0
LYD2_k127_1460390_6 ABC transporter K02049,K15578,K15579 - - 0.0000000000000000000000000000000000003507 151.0
LYD2_k127_1460390_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000001049 119.0
LYD2_k127_1460390_8 oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor K06282 - 1.12.99.6 0.0000000000001057 84.0
LYD2_k127_1460793_0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 426.0
LYD2_k127_1460793_1 oxidoreductase activity K21883 - 1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
LYD2_k127_1460793_2 Protease prsW family - - - 0.0000000000000000000000000000000000000000000000000000000000000008503 237.0
LYD2_k127_1460793_3 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000005458 225.0
LYD2_k127_1460793_4 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000005499 205.0
LYD2_k127_1460793_5 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000001296 165.0
LYD2_k127_1460793_6 ABC transporter K02065 - - 0.000000000000000000000000619 122.0
LYD2_k127_1460793_7 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000003571 69.0
LYD2_k127_1462223_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 473.0
LYD2_k127_1462223_1 DNA methylase K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 341.0
LYD2_k127_1462223_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000001444 254.0
LYD2_k127_1462223_3 - - - - 0.0000000000000000000000000000000000000000005345 162.0
LYD2_k127_1462223_4 - - - - 0.00000000000000000000000001311 112.0
LYD2_k127_1479026_0 Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032543,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0070125,GO:0071704,GO:0097159,GO:0097367,GO:0140053,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.302e-260 820.0
LYD2_k127_1479026_1 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 538.0
LYD2_k127_1479026_10 PEGA domain - - - 0.000000000000006939 84.0
LYD2_k127_1479026_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000006563 75.0
LYD2_k127_1479026_12 PEGA domain - - - 0.0000000003534 64.0
LYD2_k127_1479026_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 481.0
LYD2_k127_1479026_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 441.0
LYD2_k127_1479026_4 Aldo/keto reductase family K05275 - 1.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 343.0
LYD2_k127_1479026_5 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008778 279.0
LYD2_k127_1479026_6 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000003575 271.0
LYD2_k127_1479026_7 - - - - 0.0000000000000000000000000000000000000000000000000116 195.0
LYD2_k127_1479026_8 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000003549 176.0
LYD2_k127_1484336_0 Tetratricopeptide repeat - - - 5.555e-300 954.0
LYD2_k127_1484336_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 492.0
LYD2_k127_1484336_10 Secretory protein of YscJ/FliF family K03222 - - 0.00000000000000002518 96.0
LYD2_k127_1484336_2 ABC transporter, ATP-binding protein K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 391.0
LYD2_k127_1484336_3 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 378.0
LYD2_k127_1484336_4 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 341.0
LYD2_k127_1484336_5 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 313.0
LYD2_k127_1484336_6 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 316.0
LYD2_k127_1484336_7 - - - - 0.000000000000000000000000000000000000000000000002119 182.0
LYD2_k127_1484336_9 Biotin-lipoyl like - - - 0.0000000000000000006991 87.0
LYD2_k127_1502502_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1526.0
LYD2_k127_1502502_1 Pfam Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 604.0
LYD2_k127_1502502_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 404.0
LYD2_k127_1502502_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 295.0
LYD2_k127_1502502_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001864 291.0
LYD2_k127_1502502_5 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003085 231.0
LYD2_k127_1502502_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000001502 184.0
LYD2_k127_1519036_0 Acyclic terpene utilisation family protein AtuA - - - 5.756e-220 709.0
LYD2_k127_1519036_1 Acyl-CoA dehydrogenase, C-terminal domain K00249,K11731 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 503.0
LYD2_k127_1519036_2 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 303.0
LYD2_k127_1519036_3 TIGRFAM hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 - 2.4.1.80 0.000000000000000000000000000000000000000000000000000000000000000003624 240.0
LYD2_k127_1519036_4 YsiA-like protein, C-terminal region - - - 0.000000000000000000000000000000000000000000000000001781 191.0
LYD2_k127_1522148_0 MMPL family K07003 - - 3.294e-229 736.0
LYD2_k127_1522148_1 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.407e-223 709.0
LYD2_k127_1522148_2 SNARE associated Golgi protein K03975 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000001803 236.0
LYD2_k127_1522148_3 Protein of unknown function (DUF2442) - - - 0.000000000000000000000001825 107.0
LYD2_k127_1522148_4 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000003946 81.0
LYD2_k127_1526880_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 8.653e-222 713.0
LYD2_k127_1526880_1 Rod shape-determining protein K03569 - - 1.151e-201 631.0
LYD2_k127_1526880_2 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 537.0
LYD2_k127_1526880_3 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 409.0
LYD2_k127_1526880_4 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 318.0
LYD2_k127_1526880_5 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004738 248.0
LYD2_k127_1526880_6 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003449 247.0
LYD2_k127_1526880_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000002832 223.0
LYD2_k127_1549188_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 1.208e-288 918.0
LYD2_k127_1549188_1 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 3.127e-221 696.0
LYD2_k127_1549188_2 CoA-transferase family III K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 472.0
LYD2_k127_1549188_3 conserved protein (DUF2183) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 300.0
LYD2_k127_1549188_4 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001815 278.0
LYD2_k127_1549188_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000001719 229.0
LYD2_k127_1549188_6 repeat protein - - - 0.0000000000000000000000000000000000000000008285 180.0
LYD2_k127_1549188_7 SMART Rhodanese domain protein - - - 0.0000000001685 68.0
LYD2_k127_1549188_8 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 0.0001249 55.0
LYD2_k127_1549188_9 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0002207 45.0
LYD2_k127_1551168_0 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 440.0
LYD2_k127_1551168_1 polysaccharide biosynthetic process K06409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 414.0
LYD2_k127_1551168_2 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000002314 228.0
LYD2_k127_1551168_3 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.0000000000000000000000000000000000000001827 154.0
LYD2_k127_1551168_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000004378 143.0
LYD2_k127_1551168_6 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000008239 132.0
LYD2_k127_1551168_7 translation initiation factor activity K06996 - - 0.00000000000000000000000000000003097 131.0
LYD2_k127_1551168_8 GtrA-like protein K00995 - 2.7.8.5 0.00000000001014 72.0
LYD2_k127_1551168_9 Major Facilitator Superfamily - - - 0.0000003306 54.0
LYD2_k127_1551925_0 Pectinacetylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001115 279.0
LYD2_k127_1551925_1 Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000009902 177.0
LYD2_k127_1553296_0 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003517 247.0
LYD2_k127_1553296_1 Thioredoxin-like - - - 0.000000000000000000000000000000000000003762 160.0
LYD2_k127_1553296_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000003214 96.0
LYD2_k127_1554651_0 Acetyl-CoA carboxylase, central region - - - 0.0 1110.0
LYD2_k127_1554651_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000002841 169.0
LYD2_k127_1554651_2 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.000000000000000000000000000000000000009216 160.0
LYD2_k127_1554651_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000005085 138.0
LYD2_k127_1554651_4 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000029 131.0
LYD2_k127_1564613_0 peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 603.0
LYD2_k127_1564613_1 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 396.0
LYD2_k127_1564613_2 protein kinase activity K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000006486 283.0
LYD2_k127_1564613_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002801 255.0
LYD2_k127_1564613_4 - - - - 0.00000000000000000000000000000000000000000000000000000000007786 212.0
LYD2_k127_1564613_5 Cytochrome P450 - - - 0.0000000000000000000000000001078 123.0
LYD2_k127_1564869_0 P-aminobenzoate N-oxygenase AurF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 488.0
LYD2_k127_1564869_1 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 437.0
LYD2_k127_1564869_11 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000001716 132.0
LYD2_k127_1564869_12 ACT domain K03567 - - 0.0000000000000000000000000000001175 136.0
LYD2_k127_1564869_13 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000002381 143.0
LYD2_k127_1564869_14 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000002708 119.0
LYD2_k127_1564869_15 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000008631 80.0
LYD2_k127_1564869_2 Belongs to the TPP enzyme family K01652 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016020,GO:0016053,GO:0019752,GO:0030312,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 406.0
LYD2_k127_1564869_3 nadp-dependent K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 377.0
LYD2_k127_1564869_4 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 376.0
LYD2_k127_1564869_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000001877 273.0
LYD2_k127_1564869_6 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000007729 227.0
LYD2_k127_1564869_7 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000006125 214.0
LYD2_k127_1564869_8 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.0000000000000000000000000000000000000000000000000000006128 218.0
LYD2_k127_1564869_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000004759 185.0
LYD2_k127_1575894_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 339.0
LYD2_k127_1575894_1 flagellar basal-body rod protein FlgG K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001247 284.0
LYD2_k127_1575894_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000544 161.0
LYD2_k127_1575894_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000001634 154.0
LYD2_k127_1580957_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 572.0
LYD2_k127_1580957_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000004231 148.0
LYD2_k127_1580957_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.0000000000000000000006033 102.0
LYD2_k127_1580957_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765,K02502 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000007796 57.0
LYD2_k127_1580957_4 extracellular matrix structural constituent - - - 0.00001489 55.0
LYD2_k127_1586433_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 605.0
LYD2_k127_1586433_1 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001573 255.0
LYD2_k127_1586433_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000003407 70.0
LYD2_k127_1586433_4 - - - - 0.0009726 42.0
LYD2_k127_1591895_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1271.0
LYD2_k127_1591895_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 9.646e-253 812.0
LYD2_k127_1591895_2 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 342.0
LYD2_k127_1591895_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 326.0
LYD2_k127_1591895_4 Extensin-like protein C-terminus - - - 0.0000000000000000000000000000000000000000000000000000004459 203.0
LYD2_k127_1591895_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000007929 197.0
LYD2_k127_1591895_6 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000009259 81.0
LYD2_k127_1598382_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 394.0
LYD2_k127_1598382_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 375.0
LYD2_k127_1598382_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 376.0
LYD2_k127_1598382_3 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 353.0
LYD2_k127_1598382_4 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 317.0
LYD2_k127_1598382_5 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001859 259.0
LYD2_k127_1606762_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594,K07052 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004051 259.0
LYD2_k127_1606762_1 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009729 252.0
LYD2_k127_1606762_2 FR47-like protein - - - 0.00000000000000000000000000000000000000000000000463 177.0
LYD2_k127_1606762_3 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000002238 164.0
LYD2_k127_1613762_0 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 322.0
LYD2_k127_1613762_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 321.0
LYD2_k127_1613762_2 Putative transposase, YhgA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002435 264.0
LYD2_k127_1613762_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000003639 228.0
LYD2_k127_1613762_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000006112 207.0
LYD2_k127_1613762_5 Methyltransferase domain - - - 0.0000001182 58.0
LYD2_k127_1613762_6 Methyltransferase domain - - - 0.00003528 55.0
LYD2_k127_1632709_0 AMP-binding enzyme K01897 - 6.2.1.3 8.84e-204 651.0
LYD2_k127_1632709_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 469.0
LYD2_k127_1632709_10 Universal stress protein - - - 0.0000000000000000000000000000001949 128.0
LYD2_k127_1632709_11 - - - - 0.000000000000000000000001457 113.0
LYD2_k127_1632709_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 444.0
LYD2_k127_1632709_3 Long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 417.0
LYD2_k127_1632709_4 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648,K22317 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 357.0
LYD2_k127_1632709_5 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002565 228.0
LYD2_k127_1632709_6 Protein of unknown function (DUF1298) - - - 0.00000000000000000000000000000000000000000000000000000000000000005492 242.0
LYD2_k127_1632709_7 synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000009932 180.0
LYD2_k127_1632709_8 Chalcone isomerase-like - - - 0.00000000000000000000000000000000000006889 154.0
LYD2_k127_1632709_9 - - - - 0.0000000000000000000000000000000000215 143.0
LYD2_k127_1641649_0 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 375.0
LYD2_k127_1641649_1 PFAM Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000003476 199.0
LYD2_k127_1641649_2 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000001935 113.0
LYD2_k127_1641649_3 KR domain - - - 0.000000000000000000000004617 107.0
LYD2_k127_1641649_4 Transcriptional regulator - - - 0.0000000000000000426 90.0
LYD2_k127_1641649_5 protein conserved in cyanobacteria - - - 0.000001171 51.0
LYD2_k127_1641649_6 Domain of Unknown Function (DUF349) - - - 0.000005293 59.0
LYD2_k127_1645666_0 Insecticidal toxin complex - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001211 286.0
LYD2_k127_1645925_0 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000004939 181.0
LYD2_k127_1645925_1 ribosomal small subunit biogenesis K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000006542 174.0
LYD2_k127_1645925_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000001851 103.0
LYD2_k127_1645925_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000004241 83.0
LYD2_k127_164625_0 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412,K03224 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 441.0
LYD2_k127_164625_1 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 440.0
LYD2_k127_164625_2 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 325.0
LYD2_k127_164625_3 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 297.0
LYD2_k127_164625_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002689 279.0
LYD2_k127_164625_5 TonB dependent receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000005645 207.0
LYD2_k127_164625_6 PFAM PIN domain - - - 0.000000000000000003588 94.0
LYD2_k127_1666358_0 Zn-dependent proteases and their inactivated homologs K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 526.0
LYD2_k127_1666358_1 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002781 284.0
LYD2_k127_1666358_3 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000002296 104.0
LYD2_k127_1666358_4 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K01647,K22491 - 2.3.3.1 0.000000000005334 73.0
LYD2_k127_1671140_0 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 4.669e-240 752.0
LYD2_k127_1671140_1 Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 425.0
LYD2_k127_1671140_10 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.0000002846 61.0
LYD2_k127_1671140_2 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 406.0
LYD2_k127_1671140_3 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 385.0
LYD2_k127_1671140_4 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000003414 214.0
LYD2_k127_1671140_5 Zinc-dependent metalloprotease - - - 0.0000000000000000000000000000000000000000000000000000000000568 218.0
LYD2_k127_1671140_6 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000001114 152.0
LYD2_k127_1671140_7 - - - - 0.0000000000000000005031 94.0
LYD2_k127_1671140_8 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000008775 92.0
LYD2_k127_1674427_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 2.064e-254 811.0
LYD2_k127_1674427_1 TIGRFAM Acetoacetyl-CoA synthase K01907 - 6.2.1.16 3.879e-242 766.0
LYD2_k127_1674427_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 427.0
LYD2_k127_1674427_3 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 300.0
LYD2_k127_1674427_4 Penicillin-insensitive murein endopeptidase K07261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 304.0
LYD2_k127_1674427_5 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000009422 190.0
LYD2_k127_1679845_0 Histidine kinase - - - 6.417e-300 937.0
LYD2_k127_1679845_1 CsbD-like - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000001182 94.0
LYD2_k127_1679845_2 - - - - 0.00000000000001593 75.0
LYD2_k127_1689383_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.551e-207 656.0
LYD2_k127_1689383_1 isoleucyl-tRNA aminoacylation K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 500.0
LYD2_k127_1689383_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000139 126.0
LYD2_k127_1692897_0 Binds to single-stranded DNA and also promotes the renaturation of complementary single-stranded DNA. Function in recombination. Has a function K07455 GO:0000724,GO:0000725,GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0018130,GO:0019438,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043150,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000000004968 177.0
LYD2_k127_1692897_1 YqaJ viral recombinase family - - - 0.000000000000000000000000001288 124.0
LYD2_k127_1692897_2 Exonuclease K02342 - 2.7.7.7 0.0000000000000001914 89.0
LYD2_k127_1701885_0 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175 375.0
LYD2_k127_1701885_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001402 292.0
LYD2_k127_1701885_2 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000001077 162.0
LYD2_k127_1701885_3 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000009397 154.0
LYD2_k127_1701885_4 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000001802 128.0
LYD2_k127_1701885_5 Glycosyltransferase Family 4 - - - 0.0000000000000000004124 97.0
LYD2_k127_1701885_6 positive regulation of growth - - - 0.00001045 51.0
LYD2_k127_1723680_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 329.0
LYD2_k127_1723680_1 PFAM Alpha Beta hydrolase - - - 0.0000000000000000000000000000000000000001159 161.0
LYD2_k127_1723680_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000003538 138.0
LYD2_k127_1723680_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000009024 72.0
LYD2_k127_1723680_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0002827 53.0
LYD2_k127_1731045_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.854e-274 851.0
LYD2_k127_1731045_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 629.0
LYD2_k127_1731045_2 ABC transporter K02056 - 3.6.3.17 2.339e-194 616.0
LYD2_k127_1731045_3 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000006466 228.0
LYD2_k127_1731045_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000353 201.0
LYD2_k127_1731045_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000003208 193.0
LYD2_k127_1731045_6 - - - - 0.0000000000000000000000000000000000000000000006522 179.0
LYD2_k127_1731045_7 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000003885 165.0
LYD2_k127_1731045_8 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000001857 113.0
LYD2_k127_1731045_9 toxin-antitoxin pair type II binding - - - 0.000000000000006313 78.0
LYD2_k127_1752849_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 483.0
LYD2_k127_1752849_1 addiction module antidote protein HigA K07110,K21686 - - 0.0000000000000000000000000000000002515 143.0
LYD2_k127_1752849_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000001944 125.0
LYD2_k127_1756760_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 2.879e-213 666.0
LYD2_k127_1756760_1 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 473.0
LYD2_k127_1756760_2 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 312.0
LYD2_k127_1756760_3 L-lysine 6-monooxygenase (NADPH-requiring) K03379 - 1.14.13.22 0.000000001966 58.0
LYD2_k127_1759428_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.583e-231 742.0
LYD2_k127_1759428_1 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000001593 176.0
LYD2_k127_1759428_2 COG4635 Flavodoxin K00230 - 1.3.5.3 0.00000000000000000000000006309 115.0
LYD2_k127_176651_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008074 321.0
LYD2_k127_176651_1 Glucosyl transferase GtrII - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000141 275.0
LYD2_k127_1774984_0 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 350.0
LYD2_k127_1774984_1 PFAM Inward rectifier potassium channel K08715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008724 267.0
LYD2_k127_1774984_2 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000000000000000000000000000000000000000000000000000032 238.0
LYD2_k127_1774984_3 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000434 202.0
LYD2_k127_1774984_4 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000002196 185.0
LYD2_k127_1774984_5 PKHD-type hydroxylase K07336 - - 0.000000000000000000000000000000000000000000003215 173.0
LYD2_k127_1774984_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000004942 99.0
LYD2_k127_178459_1 membrane organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 383.0
LYD2_k127_178459_2 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 372.0
LYD2_k127_178459_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000002144 191.0
LYD2_k127_178459_4 Acid phosphatase homologues - - - 0.00000000000000000000000000000000000000000000000003383 186.0
LYD2_k127_178459_5 alkylated DNA - - - 0.00000000000000000000000000000000000000000002875 175.0
LYD2_k127_178459_6 Leucine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000002053 155.0
LYD2_k127_1787863_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 1.255e-221 706.0
LYD2_k127_1787863_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 401.0
LYD2_k127_1787863_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001617 252.0
LYD2_k127_1787863_3 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000001783 235.0
LYD2_k127_1787863_5 NAD(P)H-binding K01710 - 4.2.1.46 0.0000000000007309 70.0
LYD2_k127_1787863_6 Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane K12962 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000006353 64.0
LYD2_k127_1787863_7 Membrane-associated sensor, integral membrane domain - - - 0.0006978 50.0
LYD2_k127_1791916_0 ERAP1-like C-terminal domain K01263 - 3.4.11.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 525.0
LYD2_k127_1791916_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008718 353.0
LYD2_k127_1791916_10 toxin-antitoxin pair type II binding K19159 - - 0.000000259 55.0
LYD2_k127_1791916_2 Domain of unknown function (DUF4215) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 334.0
LYD2_k127_1791916_3 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 307.0
LYD2_k127_1791916_4 Domain of unknown function (DUF4215) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 301.0
LYD2_k127_1791916_5 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000007952 216.0
LYD2_k127_1791916_6 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000005821 177.0
LYD2_k127_1791916_8 ribonuclease activity - - - 0.00000000000000003179 90.0
LYD2_k127_1791916_9 - - - - 0.000000003965 63.0
LYD2_k127_179567_0 GGDEF domain K03412,K03413 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 535.0
LYD2_k127_179567_1 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 359.0
LYD2_k127_179567_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 331.0
LYD2_k127_179567_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000358 246.0
LYD2_k127_179567_6 Putative exonuclease, RdgC K03554 - - 0.000000000000002137 81.0
LYD2_k127_179567_8 Belongs to the UPF0235 family K09131 - - 0.000000000001077 74.0
LYD2_k127_179567_9 PFAM regulatory protein, TetR K21961 - - 0.0002307 51.0
LYD2_k127_1797917_0 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006494 254.0
LYD2_k127_1797917_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000002606 205.0
LYD2_k127_1797917_2 - - - - 0.00000000000000000000000003005 122.0
LYD2_k127_1797917_3 Belongs to the ompA family - - - 0.000000000000003961 88.0
LYD2_k127_1797917_4 Esterase PHB depolymerase K03932 - - 0.00000000000000559 86.0
LYD2_k127_1797917_5 cellulose binding - - - 0.000000001193 70.0
LYD2_k127_1797917_6 Bacterial transcription activator, effector binding domain - - - 0.000001057 59.0
LYD2_k127_1797917_7 Belongs to the glycosyl hydrolase 18 family - - - 0.00000289 57.0
LYD2_k127_1797917_8 serine-type endopeptidase activity. It is involved in the biological process described with proteolysis K08665,K09637 GO:0000122,GO:0001525,GO:0001568,GO:0001944,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0005886,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009056,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0022411,GO:0022617,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030193,GO:0030195,GO:0030198,GO:0030510,GO:0030514,GO:0030574,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032101,GO:0032102,GO:0032501,GO:0032502,GO:0032963,GO:0033619,GO:0035239,GO:0035295,GO:0035556,GO:0042592,GO:0042730,GO:0043062,GO:0043170,GO:0044238,GO:0044421,GO:0044425,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046916,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050818,GO:0050819,GO:0050878,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070011,GO:0071704,GO:0071840,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0097264,GO:0098771,GO:0140096,GO:1900046,GO:1900047,GO:1901564,GO:1902679,GO:1902680,GO:1903034,GO:1903035,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 3.4.21.106 0.00051 51.0
LYD2_k127_1798075_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 554.0
LYD2_k127_1798075_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 366.0
LYD2_k127_1798075_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 302.0
LYD2_k127_1798075_3 - - - - 0.000000000000000000000000000000000000000004986 165.0
LYD2_k127_1798075_4 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.000000000000000000001307 106.0
LYD2_k127_1798075_5 chaperone-mediated protein folding - - - 0.000000000000000000006581 106.0
LYD2_k127_1798075_6 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000001286 64.0
LYD2_k127_1807671_0 flavoprotein involved in K transport K03379 - 1.14.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 596.0
LYD2_k127_1807671_1 Ion transport 2 domain protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 379.0
LYD2_k127_1807671_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000002533 187.0
LYD2_k127_1807671_3 transcriptional regulator - - - 0.00000000000000000000000000000000001005 145.0
LYD2_k127_1807671_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000003228 108.0
LYD2_k127_1809117_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 471.0
LYD2_k127_1809117_1 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 453.0
LYD2_k127_1809117_2 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 400.0
LYD2_k127_1809117_3 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 315.0
LYD2_k127_1809117_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000003602 207.0
LYD2_k127_1812188_0 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 377.0
LYD2_k127_1812188_1 PFAM acyl-CoA dehydrogenase domain protein K00253 - 1.3.8.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 323.0
LYD2_k127_1812188_2 trans-2-enoyl-CoA reductase (NADPH) activity K07753 GO:0001561,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0006066,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006720,GO:0006721,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016101,GO:0016491,GO:0016627,GO:0016628,GO:0017144,GO:0019166,GO:0019395,GO:0019752,GO:0030258,GO:0030497,GO:0031090,GO:0031903,GO:0032787,GO:0033036,GO:0033306,GO:0033365,GO:0034308,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046394,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055114,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072330,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:1901575,GO:1901576,GO:1901615,GO:1903173 1.3.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 313.0
LYD2_k127_1812188_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000001707 236.0
LYD2_k127_1812188_4 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000001912 176.0
LYD2_k127_1815234_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 304.0
LYD2_k127_1815234_1 PFAM Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000009716 230.0
LYD2_k127_1815234_3 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000001863 154.0
LYD2_k127_1815234_4 Forkhead associated domain - - - 0.000000000000000000000000003953 122.0
LYD2_k127_1816308_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 436.0
LYD2_k127_1816308_1 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 399.0
LYD2_k127_1816308_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 318.0
LYD2_k127_1816308_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K13890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003558 286.0
LYD2_k127_1816308_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000005631 218.0
LYD2_k127_1816308_7 Inner membrane component of T3SS, cytoplasmic domain - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.00000000009524 74.0
LYD2_k127_1825718_0 - - - - 6.349e-198 643.0
LYD2_k127_1825718_1 DNA topoisomerase type I activity K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 310.0
LYD2_k127_1825718_2 Adenylate cyclase - - - 0.000000000000001352 87.0
LYD2_k127_1826289_0 Transcriptional regulator, Fis family - - - 9.737e-220 695.0
LYD2_k127_1826289_1 CsbD-like - - - 0.000000000000000000002753 95.0
LYD2_k127_1832132_0 von Willebrand factor type A domain - - - 0.0 1099.0
LYD2_k127_1832132_1 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 288.0
LYD2_k127_1832132_2 glutamate--cysteine ligase K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000001119 179.0
LYD2_k127_1840213_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 401.0
LYD2_k127_1840213_1 Ferredoxin - - - 0.0000000000000000000000000000000000000000001804 161.0
LYD2_k127_1840213_2 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000005305 154.0
LYD2_k127_1840213_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000001776 91.0
LYD2_k127_1840213_4 Anti-sigma factor K07167,K12132,K20148 - 1.13.11.50,2.7.11.1 0.000000000000000007 93.0
LYD2_k127_1849676_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 313.0
LYD2_k127_1849676_1 sh3 domain protein - - - 0.000000000000000000000004984 118.0
LYD2_k127_1849725_0 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000444 290.0
LYD2_k127_1849725_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002084 261.0
LYD2_k127_1849725_2 long-chain fatty acid transporting porin activity - - - 0.00000002992 67.0
LYD2_k127_1849725_3 KR domain - - - 0.000778 46.0
LYD2_k127_1862666_0 E1-E2 ATPase K12955 - - 1.505e-307 994.0
LYD2_k127_1862666_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 328.0
LYD2_k127_1862666_2 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.00000000000000000000000000000000000000000000000003354 192.0
LYD2_k127_1862666_3 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000005188 94.0
LYD2_k127_1862666_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000004439 88.0
LYD2_k127_1862666_6 PilZ domain - - - 0.000000005312 65.0
LYD2_k127_1871386_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 396.0
LYD2_k127_1871386_1 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000001267 228.0
LYD2_k127_1871386_2 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000001295 149.0
LYD2_k127_1871386_3 Domain of unknown function (DUF4091) - - - 0.00000000000000000000000002788 124.0
LYD2_k127_1871386_4 protein tyrosine kinase activity - - - 0.000000000000000000005694 101.0
LYD2_k127_1871386_5 protein phosphatase 2C domain protein - - - 0.000000000003364 77.0
LYD2_k127_1871386_6 extracellular polysaccharide biosynthetic process K03497,K07011,K13924 - 2.1.1.80,3.1.1.61 0.00000001399 66.0
LYD2_k127_1879789_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1182.0
LYD2_k127_1879789_1 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 603.0
LYD2_k127_1898957_0 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K05548,K08138,K08139 GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015145,GO:0015146,GO:0015148,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015519,GO:0015672,GO:0015749,GO:0015750,GO:0015753,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 469.0
LYD2_k127_1898957_1 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000004749 243.0
LYD2_k127_1898957_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000001319 236.0
LYD2_k127_1898957_3 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000001943 228.0
LYD2_k127_1898957_4 Protein of unknown function (DUF971) K03593 - - 0.00000000000000000000000000000000147 134.0
LYD2_k127_1898957_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000008355 115.0
LYD2_k127_1901775_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000002499 158.0
LYD2_k127_1901775_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000003074 74.0
LYD2_k127_191668_0 transmembrane transport K03442,K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000005886 237.0
LYD2_k127_1916774_0 Helix-turn-helix domain - - - 0.0005146 47.0
LYD2_k127_1919235_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 454.0
LYD2_k127_1919235_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 316.0
LYD2_k127_1919235_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000004908 149.0
LYD2_k127_1919235_3 Putative restriction endonuclease - - - 0.0000000000000000000000000000004968 140.0
LYD2_k127_1919235_4 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000000006318 119.0
LYD2_k127_1920301_0 - - - - 0.00000000002562 76.0
LYD2_k127_1921519_0 lyase activity K01932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 542.0
LYD2_k127_1952195_0 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region K00018 - 1.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000351 231.0
LYD2_k127_1952195_1 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000001238 70.0
LYD2_k127_1952195_2 Carboxyl transferase domain - - - 0.000000002665 61.0
LYD2_k127_1952195_3 Carboxyl transferase domain - - - 0.0000006756 62.0
LYD2_k127_1958640_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 481.0
LYD2_k127_1958640_1 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002244 279.0
LYD2_k127_1958640_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000002058 156.0
LYD2_k127_1958640_3 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000002887 138.0
LYD2_k127_1958640_4 heme oxygenase (decyclizing) activity - - - 0.00000000000003711 76.0
LYD2_k127_1967600_0 Proton-conducting membrane transporter K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001683 241.0
LYD2_k127_1967600_1 diguanylate cyclase activity K21021 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000004283 249.0
LYD2_k127_1967600_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000003296 165.0
LYD2_k127_1967600_3 FecR protein - - - 0.0000000000000001767 92.0
LYD2_k127_1967600_4 oxidoreductase activity K07114 - - 0.00000000000004371 83.0
LYD2_k127_1967600_5 - - - - 0.0000000000004989 81.0
LYD2_k127_1970967_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1174.0
LYD2_k127_1970967_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 400.0
LYD2_k127_1970967_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000003645 241.0
LYD2_k127_1976841_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 374.0
LYD2_k127_1976841_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 329.0
LYD2_k127_1976841_2 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 313.0
LYD2_k127_1980266_0 secondary active sulfate transmembrane transporter activity - - - 8.08e-267 835.0
LYD2_k127_1980266_1 In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 359.0
LYD2_k127_1980266_2 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000009423 248.0
LYD2_k127_1980266_3 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000005807 167.0
LYD2_k127_1980266_4 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000005206 116.0
LYD2_k127_1981020_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007106 229.0
LYD2_k127_1981020_2 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000000001057 167.0
LYD2_k127_1981020_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000003182 146.0
LYD2_k127_1985592_0 Methyltransferase small domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 456.0
LYD2_k127_1985592_1 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 426.0
LYD2_k127_1985592_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000003577 214.0
LYD2_k127_1985592_3 Protein conserved in bacteria K09983 - - 0.000000000000000000000000000000000000000000000001152 181.0
LYD2_k127_1985592_5 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.00000000000000194 91.0
LYD2_k127_1985592_6 Predicted membrane protein (DUF2306) - - - 0.000000001483 69.0
LYD2_k127_1985592_7 alpha-L-arabinofuranosidase - - - 0.0000007241 60.0
LYD2_k127_1985746_0 Signal transduction histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 492.0
LYD2_k127_1985746_1 M18 family aminopeptidase K01267 - 3.4.11.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008629 448.0
LYD2_k127_1985746_2 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001167 290.0
LYD2_k127_1985746_4 Redoxin K02199 - - 0.0000000000000000000000000001256 124.0
LYD2_k127_1989486_0 Belongs to the peptidase S16 family - - - 5.141e-236 754.0
LYD2_k127_1989486_1 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 440.0
LYD2_k127_1989486_2 beta-ketoacyl-acyl-carrier-protein synthase III activity K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000687 354.0
LYD2_k127_1989486_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001646 276.0
LYD2_k127_1989486_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006659 252.0
LYD2_k127_1990566_0 Class II release factor RF3, C-terminal domain K02837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 449.0
LYD2_k127_1990566_1 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 439.0
LYD2_k127_1990566_2 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 343.0
LYD2_k127_1990566_3 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.000000000000000000000000000000000000000000000000000000000293 218.0
LYD2_k127_1990566_4 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 K18586 - - 0.000000000000000000000000000000000000000000000000001158 190.0
LYD2_k127_1990566_5 PFAM AIG2 family protein - - - 0.000000000000000000000004483 108.0
LYD2_k127_2003750_0 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K00372 - - 0.0 1073.0
LYD2_k127_2003750_1 4Fe-4S dicluster domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 523.0
LYD2_k127_2003750_2 Major Facilitator Superfamily K02575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 509.0
LYD2_k127_2003750_3 nitrite reductase (NAD(P)H) large subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 425.0
LYD2_k127_2003750_4 Sulfatase - - - 0.0000000000000000000000002242 119.0
LYD2_k127_2016359_0 Sulfatase - - - 6.604e-271 868.0
LYD2_k127_2016359_1 Bacterial regulatory protein, Fis family K13599 - - 7.666e-211 668.0
LYD2_k127_2016359_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000004672 227.0
LYD2_k127_2016359_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000268 188.0
LYD2_k127_2016359_4 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.000000000000000000000656 104.0
LYD2_k127_2019004_0 Flagellar Motor Protein K11892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 482.0
LYD2_k127_2019004_1 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 308.0
LYD2_k127_2019004_2 PFAM regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000000000000000006932 220.0
LYD2_k127_2019004_3 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) K06721,K22244 GO:0001101,GO:0001558,GO:0001666,GO:0001889,GO:0001967,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007272,GO:0007275,GO:0007399,GO:0007494,GO:0007610,GO:0007631,GO:0008083,GO:0008150,GO:0008283,GO:0008284,GO:0008285,GO:0008366,GO:0009605,GO:0009611,GO:0009628,GO:0009719,GO:0009725,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010469,GO:0010604,GO:0010628,GO:0010646,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0016020,GO:0016043,GO:0019222,GO:0019899,GO:0019902,GO:0019903,GO:0022008,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0030141,GO:0030154,GO:0030307,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030545,GO:0031099,GO:0031100,GO:0031252,GO:0031253,GO:0031256,GO:0031344,GO:0031346,GO:0031410,GO:0031667,GO:0031982,GO:0032501,GO:0032502,GO:0032589,GO:0032590,GO:0032809,GO:0032870,GO:0032991,GO:0033267,GO:0034097,GO:0035295,GO:0035902,GO:0036293,GO:0036477,GO:0040008,GO:0042060,GO:0042127,GO:0042221,GO:0042493,GO:0042552,GO:0042588,GO:0042592,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043434,GO:0043933,GO:0044085,GO:0044297,GO:0044298,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044463,GO:0044464,GO:0045178,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045927,GO:0046983,GO:0048018,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048565,GO:0048583,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050678,GO:0050679,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051704,GO:0051705,GO:0051716,GO:0051960,GO:0051962,GO:0055065,GO:0055074,GO:0055080,GO:0055123,GO:0060255,GO:0060284,GO:0061008,GO:0061469,GO:0061476,GO:0061478,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070482,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071495,GO:0071840,GO:0071944,GO:0072507,GO:0097421,GO:0097447,GO:0097458,GO:0097708,GO:0098590,GO:0098771,GO:0098772,GO:0099503,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903492,GO:1903859,GO:1903861,GO:1904692,GO:1904697,GO:1904699,GO:1990785,GO:1990798,GO:1990864,GO:1990867,GO:1990868,GO:1990869,GO:1990878,GO:2000026 - 0.00000000000169 78.0
LYD2_k127_2019004_4 Cytochrome c K08685 - 1.4.9.1 0.0000003936 62.0
LYD2_k127_2021511_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 475.0
LYD2_k127_2021511_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002633 278.0
LYD2_k127_202681_0 Major Facilitator Superfamily K03446 - - 5.83e-215 679.0
LYD2_k127_202681_1 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 404.0
LYD2_k127_202681_10 Biopolymer transport protein ExbD/TolR - - - 0.00008302 54.0
LYD2_k127_202681_2 Biotin-lipoyl like K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 384.0
LYD2_k127_202681_3 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 373.0
LYD2_k127_202681_4 Bacterial transcriptional repressor C-terminal - - - 0.0000000000000000000000000000000000000000000000000000522 196.0
LYD2_k127_202681_5 Peptidase family M23 - - - 0.000000000000000000000000000000000000002547 163.0
LYD2_k127_202681_7 PIN domain - - - 0.00000000000005036 78.0
LYD2_k127_202681_8 - - - - 0.000000000004702 76.0
LYD2_k127_202681_9 Biopolymer transport protein ExbD/TolR - - - 0.00000007085 64.0
LYD2_k127_2034874_0 Belongs to the sigma-70 factor family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 572.0
LYD2_k127_2034874_1 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 565.0
LYD2_k127_2034874_10 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000179 221.0
LYD2_k127_2034874_11 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000001291 218.0
LYD2_k127_2034874_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000001244 180.0
LYD2_k127_2034874_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000001456 181.0
LYD2_k127_2034874_14 - - - - 0.000000000000000000000000000231 122.0
LYD2_k127_2034874_15 YCII-related domain - - - 0.00000000000000000000003276 107.0
LYD2_k127_2034874_16 - - - - 0.0000000000000000000000385 102.0
LYD2_k127_2034874_17 YCII-related domain - - - 0.0000001086 55.0
LYD2_k127_2034874_2 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 526.0
LYD2_k127_2034874_3 desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 488.0
LYD2_k127_2034874_4 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 444.0
LYD2_k127_2034874_5 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 349.0
LYD2_k127_2034874_6 Class II aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 314.0
LYD2_k127_2034874_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009334 284.0
LYD2_k127_2034874_8 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003054 247.0
LYD2_k127_2034874_9 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001722 241.0
LYD2_k127_2038435_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 378.0
LYD2_k127_2038435_1 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 317.0
LYD2_k127_2038435_2 Transcriptional Regulator, AraC family - - - 0.000000000000000000000000000000000000000000000002267 187.0
LYD2_k127_203964_0 Prokaryotic glutathione synthetase, ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 458.0
LYD2_k127_203964_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007591 273.0
LYD2_k127_203964_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.00000000000000000000000000000000000000009992 158.0
LYD2_k127_203964_3 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000001659 124.0
LYD2_k127_203964_5 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000419 104.0
LYD2_k127_203964_6 positive regulation of growth K18829 - - 0.0000000000000000000002182 98.0
LYD2_k127_203964_7 SpoVT / AbrB like domain - - - 0.0000639 48.0
LYD2_k127_203964_8 TRAP transporter T-component - - - 0.0004293 46.0
LYD2_k127_2043843_0 - - - - 0.000000000000000000000000000000000000000000000000000000002076 210.0
LYD2_k127_2043843_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000002812 155.0
LYD2_k127_2048563_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.484e-285 886.0
LYD2_k127_2048563_1 Flavin containing amine oxidoreductase - - - 1.243e-199 633.0
LYD2_k127_2048563_2 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 346.0
LYD2_k127_2048563_3 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000005526 184.0
LYD2_k127_2048563_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000216 70.0
LYD2_k127_2051053_0 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002849 284.0
LYD2_k127_2051053_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000193 258.0
LYD2_k127_2051053_2 Periplasmic copper-binding protein (NosD) - - - 0.0000000000000000000000000000000000000000000000000000000000000003436 238.0
LYD2_k127_2051053_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000001387 210.0
LYD2_k127_2051053_4 PFAM MaoC domain protein dehydratase - - - 0.000000000000000000000000000000000000002807 151.0
LYD2_k127_2051053_5 Phenylacetate-CoA oxygenase - - - 0.0000000000000000000000001719 117.0
LYD2_k127_2053671_0 Cell division protein FtsI penicillin-binding protein 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007295 267.0
LYD2_k127_2053671_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000266 237.0
LYD2_k127_2053671_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000009402 216.0
LYD2_k127_2053671_3 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000006656 198.0
LYD2_k127_2053671_4 NUDIX domain - - - 0.000000000000000000000000000000000000000000000007 179.0
LYD2_k127_2053671_5 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.000000000000000006843 97.0
LYD2_k127_2053671_7 Flagellar protein FliS K02422 - - 0.0000000000281 72.0
LYD2_k127_2053671_8 snoRNA binding - - - 0.000000002572 69.0
LYD2_k127_2053671_9 methyltransferase - - - 0.00000995 58.0
LYD2_k127_2055501_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 567.0
LYD2_k127_2055501_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000002386 170.0
LYD2_k127_2055501_3 UPF0391 membrane protein - - - 0.0000000000005001 74.0
LYD2_k127_2055501_4 YtxH-like protein - - - 0.0008789 47.0
LYD2_k127_2057105_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 509.0
LYD2_k127_2057105_2 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 438.0
LYD2_k127_2057105_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000003777 269.0
LYD2_k127_2057105_7 FlhB HrpN YscU SpaS Family K02401 - - 0.000002769 57.0
LYD2_k127_2064971_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 366.0
LYD2_k127_2064971_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 319.0
LYD2_k127_2064971_2 Domain of unknown function (DUF4397) - - - 0.000001224 58.0
LYD2_k127_2075971_0 Transcriptional Regulator, AraC family - - - 0.0000000000000000000000000000000000000000000000005191 190.0
LYD2_k127_2075971_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000002143 147.0
LYD2_k127_2075971_2 Chlorophyllase enzyme - - - 0.0000000000000000000001563 114.0
LYD2_k127_2075971_3 Beta-L-arabinofuranosidase, GH127 - - - 0.00000000000000007577 89.0
LYD2_k127_2075971_4 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000007549 70.0
LYD2_k127_2077244_0 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 1.327e-223 704.0
LYD2_k127_2077244_1 lycopene cyclase K06443 - 5.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 386.0
LYD2_k127_2077244_2 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 321.0
LYD2_k127_2077244_3 Belongs to the FPP GGPP synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001579 289.0
LYD2_k127_2077244_4 PFAM Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000003092 287.0
LYD2_k127_2077244_6 B12 binding domain K22491 - - 0.000000000000000000000000000000008156 140.0
LYD2_k127_2077244_7 Histidine kinase - - - 0.00000000000000003797 88.0
LYD2_k127_2077244_8 response regulator - - - 0.00000000000000008104 87.0
LYD2_k127_2077244_9 protein conserved in bacteria - - - 0.000000000000009037 89.0
LYD2_k127_207958_0 Alpha-2-Macroglobulin K06894 - - 0.0 1291.0
LYD2_k127_207958_1 aconitate hydratase - - - 0.0 1056.0
LYD2_k127_207958_2 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.000000000000000000000000000000000000000000000000000000000005718 232.0
LYD2_k127_207958_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000003378 213.0
LYD2_k127_2098723_0 response regulator K07713 - - 6.406e-196 617.0
LYD2_k127_2098723_1 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 495.0
LYD2_k127_2098723_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 485.0
LYD2_k127_2098723_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 373.0
LYD2_k127_2098723_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 351.0
LYD2_k127_2098723_5 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000003406 177.0
LYD2_k127_2098723_6 zinc-ribbon domain - - - 0.000000000000000000000000000000000954 147.0
LYD2_k127_2098723_7 - - - - 0.00000000000000000615 87.0
LYD2_k127_2101289_0 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 482.0
LYD2_k127_2101289_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 315.0
LYD2_k127_2101289_10 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000000000001294 108.0
LYD2_k127_2101289_11 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000006504 100.0
LYD2_k127_2101289_12 - - - - 0.0000000000006599 79.0
LYD2_k127_2101289_14 copper-translocating P-type ATPase K01534 - 3.6.3.3,3.6.3.5 0.000004213 55.0
LYD2_k127_2101289_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 322.0
LYD2_k127_2101289_3 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002314 238.0
LYD2_k127_2101289_4 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000001578 227.0
LYD2_k127_2101289_5 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000000000000004547 216.0
LYD2_k127_2101289_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000001359 115.0
LYD2_k127_2101289_8 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000002157 109.0
LYD2_k127_2101289_9 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000003817 109.0
LYD2_k127_2114014_0 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 383.0
LYD2_k127_2114014_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 329.0
LYD2_k127_2114014_2 metal-dependent hydrolase of the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 316.0
LYD2_k127_2114014_3 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000397 197.0
LYD2_k127_2124525_0 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000003946 229.0
LYD2_k127_2124525_1 FMN binding - - - 0.0000000000000000000000000000001528 130.0
LYD2_k127_2124525_2 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000008388 105.0
LYD2_k127_2124525_3 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000005106 91.0
LYD2_k127_2124525_4 Bacterial transcription activator, effector binding domain - - - 0.000000000000001183 81.0
LYD2_k127_2124525_5 - - - - 0.00000002762 64.0
LYD2_k127_2130860_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 394.0
LYD2_k127_2130860_1 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000000004111 163.0
LYD2_k127_2130860_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000007768 91.0
LYD2_k127_2130860_3 Antitoxin component of a toxin-antitoxin (TA) module - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000005539 52.0
LYD2_k127_2130860_4 PFAM DsrE family protein - - - 0.0001202 53.0
LYD2_k127_2135392_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 473.0
LYD2_k127_2135392_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001798 262.0
LYD2_k127_2135392_2 Bacteriophage replication gene A protein (GPA) - - - 0.0000001104 57.0
LYD2_k127_2135619_0 Aldehyde dehydrogenase family K00129 - 1.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 398.0
LYD2_k127_214403_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - GO:0008150,GO:0010565,GO:0019216,GO:0019217,GO:0019222,GO:0031323,GO:0050789,GO:0050794,GO:0062012,GO:0065007,GO:0080090 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 417.0
LYD2_k127_214403_1 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000825 231.0
LYD2_k127_214403_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000001774 141.0
LYD2_k127_214403_3 FecR protein - - - 0.000000000103 74.0
LYD2_k127_2149538_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261,K00262 - 1.4.1.3,1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 468.0
LYD2_k127_2149538_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001402 269.0
LYD2_k127_2149538_2 Universal stress protein - - - 0.0000000000000000000000000002739 122.0
LYD2_k127_2149538_3 Pentapeptide - - - 0.0000000000000000000004294 104.0
LYD2_k127_2149538_4 cellulose binding - - - 0.0000000000008126 83.0
LYD2_k127_2159355_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0 1393.0
LYD2_k127_2159355_1 PrkA AAA domain K07180 - - 1.925e-265 822.0
LYD2_k127_2159355_10 amine dehydrogenase activity - - - 0.000000001504 67.0
LYD2_k127_2159355_11 - - - - 0.0006616 52.0
LYD2_k127_2159355_2 Sigma-54 interaction domain K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 524.0
LYD2_k127_2159355_3 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 451.0
LYD2_k127_2159355_4 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008997 402.0
LYD2_k127_2159355_5 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 339.0
LYD2_k127_2159355_6 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000006166 211.0
LYD2_k127_2159355_8 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000001436 108.0
LYD2_k127_2166159_0 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 585.0
LYD2_k127_2166159_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 327.0
LYD2_k127_2166159_2 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002377 278.0
LYD2_k127_2166159_4 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000002738 67.0
LYD2_k127_2182478_0 - - - - 0.0000000000000000000000003207 120.0
LYD2_k127_2182478_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000008422 65.0
LYD2_k127_2187766_0 ABC transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 343.0
LYD2_k127_2187766_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000008112 123.0
LYD2_k127_2187766_2 - - - - 0.000000000000000000000000007652 120.0
LYD2_k127_2187766_4 BPTI/Kunitz family of serine protease inhibitors. - - - 0.000000000000003359 87.0
LYD2_k127_2203060_0 K channel, inward rectifier - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 586.0
LYD2_k127_2203060_1 HEPN domain K09132 - - 0.00000000000009381 78.0
LYD2_k127_2203060_2 nucleotidyltransferase activity - - - 0.000000122 59.0
LYD2_k127_2213967_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000004079 115.0
LYD2_k127_2228643_0 DNA helicase K03657 - 3.6.4.12 9.428e-207 672.0
LYD2_k127_2228643_1 Alpha/beta hydrolase family K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000001101 229.0
LYD2_k127_2228643_2 Protein of unknown function (DUF2167) - - - 0.00000000000000000000000000000000000000000000000000002507 211.0
LYD2_k127_2228643_4 - - - - 0.0000000000000000000000000000000000000000003429 167.0
LYD2_k127_2228643_5 Peptidase family M50 - - - 0.00000000009943 68.0
LYD2_k127_2235919_0 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 433.0
LYD2_k127_2235919_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 418.0
LYD2_k127_2235919_2 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 379.0
LYD2_k127_2235919_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000005729 246.0
LYD2_k127_2235919_4 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000358 239.0
LYD2_k127_2235919_5 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000000000000000000000000000268 209.0
LYD2_k127_2235919_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000000000000000000002595 125.0
LYD2_k127_2235919_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000001145 64.0
LYD2_k127_2235919_8 Antidote-toxin recognition MazE, bacterial antitoxin K18829 - - 0.000000001622 61.0
LYD2_k127_2239788_0 Protein of unknown function, DUF255 K06888 - - 9.723e-202 674.0
LYD2_k127_2239788_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 459.0
LYD2_k127_2239788_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145,K05829 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 362.0
LYD2_k127_2239788_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 328.0
LYD2_k127_2239788_4 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 298.0
LYD2_k127_2239788_5 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000423 194.0
LYD2_k127_2239788_6 Domain of unknown function (DU1801) - - - 0.0000000000000006331 82.0
LYD2_k127_2239788_7 PFAM Mo-dependent nitrogenase - - - 0.0000148 54.0
LYD2_k127_2242469_0 Belongs to the thiolase family K08764 GO:0000038,GO:0000062,GO:0000166,GO:0001676,GO:0002119,GO:0002164,GO:0003008,GO:0003674,GO:0003824,GO:0003988,GO:0005102,GO:0005215,GO:0005319,GO:0005488,GO:0005496,GO:0005504,GO:0005515,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005782,GO:0005783,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006163,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006694,GO:0006699,GO:0006700,GO:0006701,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006996,GO:0007031,GO:0007275,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007635,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008207,GO:0008289,GO:0008306,GO:0008355,GO:0008525,GO:0008526,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009719,GO:0009725,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010817,GO:0010876,GO:0010883,GO:0010888,GO:0010893,GO:0010941,GO:0010942,GO:0012505,GO:0014070,GO:0015031,GO:0015248,GO:0015485,GO:0015711,GO:0015748,GO:0015833,GO:0015850,GO:0015914,GO:0015918,GO:0016020,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016137,GO:0016138,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0017127,GO:0017144,GO:0019216,GO:0019218,GO:0019222,GO:0019236,GO:0019395,GO:0019637,GO:0019693,GO:0019748,GO:0019751,GO:0019752,GO:0019867,GO:0019898,GO:0022611,GO:0030258,GO:0030301,GO:0030554,GO:0031090,GO:0031312,GO:0031315,GO:0031406,GO:0031907,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032101,GO:0032355,GO:0032368,GO:0032370,GO:0032371,GO:0032373,GO:0032374,GO:0032376,GO:0032377,GO:0032379,GO:0032380,GO:0032382,GO:0032383,GO:0032385,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032879,GO:0032934,GO:0032957,GO:0032958,GO:0032959,GO:0032991,GO:0033036,GO:0033218,GO:0033293,GO:0033365,GO:0033540,GO:0033559,GO:0033814,GO:0033865,GO:0033875,GO:0033993,GO:0034032,GO:0034440,GO:0034613,GO:0034641,GO:0034698,GO:0034699,GO:0034754,GO:0035383,GO:0036041,GO:0036042,GO:0036094,GO:0036109,GO:0036314,GO:0036315,GO:0040008,GO:0040012,GO:0040024,GO:0042048,GO:0042180,GO:0042181,GO:0042221,GO:0042445,GO:0042446,GO:0042448,GO:0042579,GO:0042802,GO:0042803,GO:0042810,GO:0042811,GO:0042886,GO:0042981,GO:0043053,GO:0043054,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043177,GO:0043178,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0043436,GO:0043574,GO:0043603,GO:0043647,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044550,GO:0045184,GO:0045540,GO:0045542,GO:0045834,GO:0045927,GO:0045940,GO:0046165,GO:0046173,GO:0046394,GO:0046395,GO:0046483,GO:0046889,GO:0046890,GO:0046907,GO:0046982,GO:0046983,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048580,GO:0048582,GO:0048583,GO:0048638,GO:0048639,GO:0048856,GO:0050632,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050877,GO:0050890,GO:0050896,GO:0050920,GO:0051049,GO:0051050,GO:0051094,GO:0051179,GO:0051186,GO:0051234,GO:0051239,GO:0051240,GO:0051641,GO:0051649,GO:0051716,GO:0055086,GO:0055114,GO:0055115,GO:0060341,GO:0060620,GO:0061062,GO:0061063,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0070013,GO:0070538,GO:0070723,GO:0070727,GO:0070887,GO:0071310,GO:0071396,GO:0071397,GO:0071407,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071981,GO:0072329,GO:0072330,GO:0072521,GO:0072594,GO:0072657,GO:0072659,GO:0072662,GO:0072663,GO:0080090,GO:0090181,GO:0090205,GO:0090407,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0098588,GO:0098805,GO:0106118,GO:0106120,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901373,GO:1901564,GO:1901567,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901657,GO:1901659,GO:1901681,GO:1901698,GO:1901700,GO:1901701,GO:1902930,GO:1902932,GO:1904069,GO:1904070,GO:1904109,GO:1904121,GO:1905952,GO:1905953,GO:1905954,GO:1990778,GO:2000026,GO:2000909,GO:2000911 2.3.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 604.0
LYD2_k127_2242469_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002452 276.0
LYD2_k127_2242469_2 -acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001583 262.0
LYD2_k127_2242469_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K21000 - - 0.000000000000000000000000000000000000000000000000000000004439 220.0
LYD2_k127_2242469_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000001022 179.0
LYD2_k127_2242469_5 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.00000000000000000000000000000000006803 147.0
LYD2_k127_2242469_6 Belongs to the ompA family K03286 - - 0.0000000000000000000001015 111.0
LYD2_k127_2249676_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 604.0
LYD2_k127_2249676_1 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 484.0
LYD2_k127_2249676_2 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 331.0
LYD2_k127_2249676_3 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000004334 186.0
LYD2_k127_2249676_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000035 124.0
LYD2_k127_2249676_5 - - - - 0.0000000000000000000004581 109.0
LYD2_k127_2249676_6 - - - - 0.000000000000000008258 97.0
LYD2_k127_226335_0 flavoprotein involved in K transport - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 394.0
LYD2_k127_226335_1 zinc-ribbon domain - - - 0.000000000003326 77.0
LYD2_k127_226335_2 P-loop Domain of unknown function (DUF2791) - - - 0.0000037 59.0
LYD2_k127_2266253_0 signal peptide peptidase SppA, 36K type K04773 - - 7.658e-219 707.0
LYD2_k127_2266253_1 VWA domain containing CoxE-like protein K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 431.0
LYD2_k127_2266253_2 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 398.0
LYD2_k127_2266253_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 387.0
LYD2_k127_2266253_4 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 385.0
LYD2_k127_2266253_5 - - - - 0.0000000162 64.0
LYD2_k127_2266253_6 ATPases associated with a variety of cellular activities - - - 0.00008611 53.0
LYD2_k127_2269557_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 611.0
LYD2_k127_2269557_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 364.0
LYD2_k127_2269557_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 345.0
LYD2_k127_2269557_3 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000000000000001982 241.0
LYD2_k127_2272143_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003199 279.0
LYD2_k127_2272143_1 spore germination - - - 0.000000000000000000000000000000000000000006964 167.0
LYD2_k127_2272143_2 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.0000000000000000000000000000000000001368 147.0
LYD2_k127_2274827_0 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 373.0
LYD2_k127_2274827_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000007421 246.0
LYD2_k127_2274827_10 Calcium ion binding - GO:0002009,GO:0002165,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0007275,GO:0007424,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0007591,GO:0008150,GO:0008362,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0022404,GO:0031012,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040003,GO:0040005,GO:0042303,GO:0042335,GO:0044421,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0060429,GO:0060541,GO:0060562,GO:0065007,GO:0065008,GO:0090066 - 0.0006909 51.0
LYD2_k127_2274827_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000006039 237.0
LYD2_k127_2274827_3 Pacifastin inhibitor (LCMII) - - - 0.0000000000000000000000000000000005506 142.0
LYD2_k127_2274827_4 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000007214 121.0
LYD2_k127_2274827_5 Cupin - - - 0.00000000000000000001846 100.0
LYD2_k127_2274827_6 Kazal type serine protease inhibitors - - - 0.00000000000005878 82.0
LYD2_k127_2274827_7 dioxygenase activity - - - 0.000000000003763 77.0
LYD2_k127_2274827_9 - - - - 0.0003777 51.0
LYD2_k127_2300477_0 DNA helicase K03657 - 3.6.4.12 9.899e-206 668.0
LYD2_k127_2300477_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000445 192.0
LYD2_k127_2300477_2 RHS Repeat - - - 0.0004793 45.0
LYD2_k127_2305413_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 433.0
LYD2_k127_2305413_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000007012 230.0
LYD2_k127_2305413_2 - - - - 0.000000000000000000000000003203 111.0
LYD2_k127_2305413_3 His Kinase A (phosphoacceptor) domain - - - 0.00000003613 64.0
LYD2_k127_2306216_1 - - - - 0.00001048 57.0
LYD2_k127_2314613_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006322 257.0
LYD2_k127_2314613_1 Prokaryotic N-terminal methylation motif K02650 - - 0.00000000000000000000000000000000000000751 152.0
LYD2_k127_2314613_2 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000000004466 141.0
LYD2_k127_2314613_3 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000001002 94.0
LYD2_k127_2314613_4 Prokaryotic N-terminal methylation motif K02456 - - 0.000003644 54.0
LYD2_k127_2315683_0 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0 1039.0
LYD2_k127_2315683_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.0 1024.0
LYD2_k127_2315683_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 2.891e-237 747.0
LYD2_k127_2315683_3 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 338.0
LYD2_k127_2315683_4 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000002763 248.0
LYD2_k127_2315683_5 - - - - 0.0000000000000000000000000001963 125.0
LYD2_k127_2315683_6 Belongs to the P(II) protein family K04751,K04752 - - 0.00006486 53.0
LYD2_k127_2317496_0 Parallel beta-helix repeats - - - 0.0 1050.0
LYD2_k127_2317496_1 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 1.048e-239 759.0
LYD2_k127_2332246_0 Transglycosylase SLT domain K08306,K08309 - - 0.00000000000000000000000000000000000000000000000000000001898 201.0
LYD2_k127_2332246_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000002193 202.0
LYD2_k127_2332246_2 Methyltransferase domain K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000004344 195.0
LYD2_k127_2332246_3 Protein of unknown function (DUF1698) - - - 0.0000000000000000001358 92.0
LYD2_k127_2332246_4 extracellular matrix structural constituent - - - 0.0005437 49.0
LYD2_k127_2332634_0 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000001546 138.0
LYD2_k127_2332634_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000003474 132.0
LYD2_k127_2332634_2 - - - - 0.00004477 55.0
LYD2_k127_2332634_3 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 0.0003695 46.0
LYD2_k127_2340803_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001973 274.0
LYD2_k127_2340803_1 - - - - 0.0000008081 62.0
LYD2_k127_2342465_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 603.0
LYD2_k127_2342465_1 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 458.0
LYD2_k127_2342465_2 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 404.0
LYD2_k127_2342465_3 HEAT repeats - - - 0.000000000000000000000000000000000035 143.0
LYD2_k127_2354602_0 Carbamoyl-phosphate synthetase large chain domain protein K01941 - 6.3.4.6 0.0 1551.0
LYD2_k127_2354602_1 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 373.0
LYD2_k127_2354602_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 372.0
LYD2_k127_2354602_3 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 384.0
LYD2_k127_2354602_4 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 320.0
LYD2_k127_2354602_5 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 289.0
LYD2_k127_2354602_6 Allophanate hydrolase K01457 - 3.5.1.54 0.00000000000000000001318 97.0
LYD2_k127_2365269_0 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 484.0
LYD2_k127_2365269_2 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 423.0
LYD2_k127_2365269_3 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 346.0
LYD2_k127_2365269_4 - - - - 0.00000000000000000000000000000000000006367 146.0
LYD2_k127_2365269_6 Permease, YjgP YjgQ family K11720 - - 0.000005871 52.0
LYD2_k127_2372127_0 PDZ domain (Also known as DHR or GLGF) K08372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 390.0
LYD2_k127_2372127_1 P-aminobenzoate N-oxygenase AurF - - - 0.000000000000000000000000000000000000000000000000000945 200.0
LYD2_k127_2372127_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000001799 165.0
LYD2_k127_2372127_3 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000001952 55.0
LYD2_k127_2372127_5 Heavy-metal resistance - - - 0.0006717 49.0
LYD2_k127_2385277_0 membrane protein involved in D-alanine export K19294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 354.0
LYD2_k127_2385277_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 322.0
LYD2_k127_2385277_2 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000000000000002382 112.0
LYD2_k127_2385277_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000022 94.0
LYD2_k127_2385715_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000004466 236.0
LYD2_k127_2385715_1 HIT domain - - - 0.00000002667 63.0
LYD2_k127_2385715_2 - - - - 0.000002833 58.0
LYD2_k127_2386372_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 2.151e-220 712.0
LYD2_k127_2386372_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 425.0
LYD2_k127_2386372_2 FHIPEP family K03230 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009322 368.0
LYD2_k127_2386372_3 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 314.0
LYD2_k127_2386372_4 FIST C domain - GO:0008150,GO:0040007 - 0.0000000000000000000000000000000000000000000000000000000000000000112 239.0
LYD2_k127_2387180_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 310.0
LYD2_k127_2387180_1 - - - - 0.000000000000000000000000000000000008008 148.0
LYD2_k127_2387180_2 domain, Protein - - - 0.0000000000000000000000000000000002967 139.0
LYD2_k127_2387180_3 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000406 132.0
LYD2_k127_2387180_4 methyltransferase - - - 0.00000000000000000000002426 111.0
LYD2_k127_2401094_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 8.246e-226 713.0
LYD2_k127_2401094_1 domain protein K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 595.0
LYD2_k127_2401094_2 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 574.0
LYD2_k127_2401094_3 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 590.0
LYD2_k127_2401094_4 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 421.0
LYD2_k127_2401094_6 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000004573 159.0
LYD2_k127_2401094_8 Tetratricopeptide repeat - - - 0.000000009118 69.0
LYD2_k127_2401553_0 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 414.0
LYD2_k127_2401553_1 Family membership K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 359.0
LYD2_k127_2401553_10 - - - - 0.0000027 59.0
LYD2_k127_2401553_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000002556 221.0
LYD2_k127_2401553_3 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000000002 167.0
LYD2_k127_2401553_4 Outer membrane receptor K02014 - - 0.000000000000000000000000000000000000007014 161.0
LYD2_k127_2401553_5 PEGA domain K02014 - - 0.0000000000000000000000000000007085 137.0
LYD2_k127_2401553_7 - - - - 0.000000000000000000000000435 124.0
LYD2_k127_2406141_0 alpha beta - - - 0.000000000000000000000000000000000000000000003847 177.0
LYD2_k127_2406141_1 PFAM Peptidase M11 gametolysin - - - 0.000000000000000000000000000000000002383 159.0
LYD2_k127_2406141_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000003037 145.0
LYD2_k127_2406141_3 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.000000000000000000000000000000155 142.0
LYD2_k127_2406141_4 Parallel beta-helix repeats - - - 0.000000009076 69.0
LYD2_k127_2406141_5 iron ion homeostasis - - - 0.000926 52.0
LYD2_k127_2416555_0 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 425.0
LYD2_k127_2416555_1 transcription regulator containing HTH domain K18831 - - 0.000000000000000000001192 95.0
LYD2_k127_2421077_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 542.0
LYD2_k127_2421077_1 Histidine kinase K07716 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 499.0
LYD2_k127_2421077_10 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000002867 131.0
LYD2_k127_2421077_11 Universal stress protein - - - 0.00000000000000000000000001104 118.0
LYD2_k127_2421077_13 CARDB - - - 0.00000000000000000002537 106.0
LYD2_k127_2421077_15 - - - - 0.000004384 53.0
LYD2_k127_2421077_2 SMART alpha amylase catalytic sub domain K01187,K05343 - 3.2.1.1,3.2.1.20,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 454.0
LYD2_k127_2421077_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 407.0
LYD2_k127_2421077_4 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000005684 267.0
LYD2_k127_2421077_5 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000389 229.0
LYD2_k127_2421077_6 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000001308 214.0
LYD2_k127_2421077_7 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000001245 208.0
LYD2_k127_2421077_8 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000008036 174.0
LYD2_k127_2421077_9 Belongs to the glycosyl hydrolase family 6 K19668 - 3.2.1.91 0.00000000000000000000000000000001994 141.0
LYD2_k127_2444306_0 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000004591 184.0
LYD2_k127_2444306_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.000000000000000000000000000000000000000000007257 170.0
LYD2_k127_2444306_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000001594 166.0
LYD2_k127_2444306_3 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.0000000000000000000000000000000000002571 155.0
LYD2_k127_2444306_4 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000004719 112.0
LYD2_k127_2444306_5 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.000000000000000000007853 98.0
LYD2_k127_2444306_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00009787 45.0
LYD2_k127_2445749_0 cell wall organization K14949 - 2.7.11.1 3.732e-290 958.0
LYD2_k127_2445749_1 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003461 277.0
LYD2_k127_2445749_10 pyrroloquinoline quinone binding - - - 0.0000000000000002002 93.0
LYD2_k127_2445749_11 PFAM glycosyl transferase family 2 - - - 0.00000000000002623 84.0
LYD2_k127_2445749_12 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000001228 74.0
LYD2_k127_2445749_14 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000002 63.0
LYD2_k127_2445749_16 Putative addiction module component - - - 0.00000598 52.0
LYD2_k127_2445749_2 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000001065 214.0
LYD2_k127_2445749_3 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001069 215.0
LYD2_k127_2445749_4 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000003869 194.0
LYD2_k127_2445749_5 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000001397 152.0
LYD2_k127_2445749_6 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000009514 145.0
LYD2_k127_2445749_7 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000002286 138.0
LYD2_k127_2445749_8 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000001347 113.0
LYD2_k127_2445749_9 - - - - 0.0000000000000000006803 101.0
LYD2_k127_2473108_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 520.0
LYD2_k127_2473108_1 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 338.0
LYD2_k127_2476758_0 phosphorelay sensor kinase activity K02342,K02660 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001209 284.0
LYD2_k127_2476758_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000001608 179.0
LYD2_k127_2476758_2 - - - - 0.00000000000000000000000000000000000002362 156.0
LYD2_k127_2476758_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000001841 155.0
LYD2_k127_2476758_4 - - - - 0.000000000000000000006961 97.0
LYD2_k127_2476758_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000004102 100.0
LYD2_k127_2483890_0 Regulator of chromosome condensation (RCC1) repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 357.0
LYD2_k127_2483890_1 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000003456 214.0
LYD2_k127_2483890_2 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000239 140.0
LYD2_k127_2483890_3 Cytochrome C oxidase, cbb3-type, subunit III K00368 - 1.7.2.1 0.00000000000004963 77.0
LYD2_k127_2483890_4 Putative prokaryotic signal transducing protein - - - 0.00008328 46.0
LYD2_k127_2491906_0 heat shock protein binding - - - 1.766e-227 724.0
LYD2_k127_2491906_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 467.0
LYD2_k127_2491906_3 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009963 254.0
LYD2_k127_2491906_4 ferredoxin-NADP+ reductase activity - - - 0.00000000000000000000000000000000000000000000000000000003078 208.0
LYD2_k127_2491906_5 heat shock protein binding - - - 0.000000000000000000000000000000000000000663 156.0
LYD2_k127_2491906_6 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000001003 133.0
LYD2_k127_2491906_7 PAS fold - - - 0.00000000006736 65.0
LYD2_k127_2493265_0 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 449.0
LYD2_k127_2493265_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 287.0
LYD2_k127_2493265_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000348 133.0
LYD2_k127_2496518_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001963 290.0
LYD2_k127_2496518_1 xylan catabolic process K03932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009537 276.0
LYD2_k127_2496518_2 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000001203 211.0
LYD2_k127_2496518_3 - - - - 0.000000000000000000000000000000000000000000000000000002367 199.0
LYD2_k127_2496518_4 nucleic acid-binding protein contains PIN domain K07065 - - 0.0000000000000000000000000000000000000000000001991 171.0
LYD2_k127_2496518_5 - - - - 0.0000000000000007252 89.0
LYD2_k127_2496518_6 Keratin, high sulfur B2 protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007275,GO:0008150,GO:0008544,GO:0009888,GO:0009913,GO:0009987,GO:0030154,GO:0030216,GO:0030855,GO:0031424,GO:0032501,GO:0032502,GO:0043588,GO:0044424,GO:0044444,GO:0044464,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0060429 - 0.000000004109 68.0
LYD2_k127_2496518_7 - - - - 0.000001576 59.0
LYD2_k127_2496518_8 Copper type II ascorbate-dependent monooxygenase, C-terminal domain K00504,K18200 - 1.14.17.3,4.3.2.5 0.000005043 59.0
LYD2_k127_2496518_9 - - - - 0.000164 49.0
LYD2_k127_2500121_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 565.0
LYD2_k127_2500121_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 511.0
LYD2_k127_2500121_2 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 503.0
LYD2_k127_2500121_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003613 261.0
LYD2_k127_2500121_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000007077 95.0
LYD2_k127_2500121_5 cheY-homologous receiver domain - - - 0.000000000001216 74.0
LYD2_k127_2500121_6 cheY-homologous receiver domain - - - 0.000000000002064 78.0
LYD2_k127_2500121_7 Cupin 2, conserved barrel domain protein - - - 0.000000000003173 72.0
LYD2_k127_2500121_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000001378 67.0
LYD2_k127_2516556_0 Protein of unknown function (DUF1214) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 501.0
LYD2_k127_2516556_1 Luciferase-like monooxygenase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 361.0
LYD2_k127_2516556_2 Polyketide cyclase dehydrase - - - 0.000000000000000151 89.0
LYD2_k127_2516556_3 Lactonase, 7-bladed beta-propeller - - - 0.00004885 56.0
LYD2_k127_2524156_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 1.858e-272 875.0
LYD2_k127_2524156_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 411.0
LYD2_k127_2524156_2 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 382.0
LYD2_k127_2524156_3 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002852 261.0
LYD2_k127_2537795_0 AcrB/AcrD/AcrF family K07787,K15726 - - 7.194e-293 930.0
LYD2_k127_2537795_10 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K15725 - - 0.0000000000000000000000000000000005181 151.0
LYD2_k127_2537795_11 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000002794 109.0
LYD2_k127_2537795_12 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0005996 51.0
LYD2_k127_2537795_2 Lipase maturation factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009046 482.0
LYD2_k127_2537795_3 thiol oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 407.0
LYD2_k127_2537795_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000001632 229.0
LYD2_k127_2537795_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000001971 216.0
LYD2_k127_2537795_6 iron ion transport K07224 - - 0.000000000000000000000000000000000000000000000000000000002172 224.0
LYD2_k127_2537795_7 Member of a two-component regulatory system K02484,K07644,K07645,K18143 GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0033554,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000006661 217.0
LYD2_k127_2537795_8 Phosphoesterase family K01114 - 3.1.4.3 0.000000000000000000000000000000000000000000000000000003208 208.0
LYD2_k127_2537795_9 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000001347 191.0
LYD2_k127_2539264_0 non-ribosomal peptide synthetase - - - 3.647e-232 755.0
LYD2_k127_2539264_1 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000009904 174.0
LYD2_k127_254340_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 360.0
LYD2_k127_254340_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 327.0
LYD2_k127_254340_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 306.0
LYD2_k127_254340_3 arsenate reductase K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.00000000000000000000000000000000000002829 146.0
LYD2_k127_254340_4 cheY-homologous receiver domain - - - 0.00000000000001449 79.0
LYD2_k127_254340_5 Bacterial regulatory protein, Fis family K02481,K07713 - - 0.0000000000004545 73.0
LYD2_k127_254340_6 SURF4 family K15977 - - 0.000004053 57.0
LYD2_k127_254340_7 His Kinase A (phosphoacceptor) domain - - - 0.0004604 43.0
LYD2_k127_2543882_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000005818 235.0
LYD2_k127_2543882_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000008124 158.0
LYD2_k127_2543882_2 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000001289 68.0
LYD2_k127_2543882_3 luxR family - - - 0.00007879 54.0
LYD2_k127_2546743_0 - - - - 5.309e-198 631.0
LYD2_k127_2546743_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 415.0
LYD2_k127_2546743_2 Arsenical pump membrane protein K03893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 340.0
LYD2_k127_2546743_3 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000000000000000000000000000002878 195.0
LYD2_k127_2546743_4 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000148 123.0
LYD2_k127_2553430_1 Dienelactone hydrolase K22249 - 3.1.1.76 0.00000000000000000000000000000000000000000000000000000000000000005954 244.0
LYD2_k127_2553430_2 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000001195 186.0
LYD2_k127_2553430_3 Trypsin Inhibitor like cysteine rich domain - - - 0.0003376 52.0
LYD2_k127_2554422_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 338.0
LYD2_k127_2554422_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 311.0
LYD2_k127_2554422_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003962 262.0
LYD2_k127_2554422_4 lipolytic protein G-D-S-L family - - - 0.000000000000000008628 96.0
LYD2_k127_2554422_5 integral membrane protein - - - 0.00000000000000008308 93.0
LYD2_k127_2566774_0 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006961 449.0
LYD2_k127_2566774_1 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 336.0
LYD2_k127_2566774_2 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001195 289.0
LYD2_k127_2566774_3 flagellar motor switch protein FliG K02410 - - 0.00000000000000000000000000000000000000000000000000001002 201.0
LYD2_k127_2566774_4 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.000000000000000000000000000000000000003786 156.0
LYD2_k127_2566774_5 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000001008 138.0
LYD2_k127_2566774_6 Flagellar assembly protein FliH K02411 - - 0.00000002762 64.0
LYD2_k127_2566774_7 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000001939 60.0
LYD2_k127_2566774_8 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000003296 57.0
LYD2_k127_2581475_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 607.0
LYD2_k127_2581475_1 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 557.0
LYD2_k127_2581475_10 S-adenosylmethionine diacylglycerol 3-amino-3-carboxypropyl transferase K13622 - - 0.00000000000000000000000000000000000000000000000001935 194.0
LYD2_k127_2581475_11 pyridoxamine 5'-phosphate K07005 - - 0.00000000000000000000000000000000000002857 150.0
LYD2_k127_2581475_12 Bacterial regulatory proteins, tetR family K22107 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0042803,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000004264 116.0
LYD2_k127_2581475_13 Divergent 4Fe-4S mono-cluster K05337 - - 0.000000000006596 71.0
LYD2_k127_2581475_14 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000001183 64.0
LYD2_k127_2581475_2 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 494.0
LYD2_k127_2581475_3 AMP-binding enzyme C-terminal domain K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 436.0
LYD2_k127_2581475_4 dihydrodipicolinate reductase K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008668 379.0
LYD2_k127_2581475_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00076 GO:0002682,GO:0002684,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136 1.1.1.159 0.00000000000000000000000000000000000000000000000000000000000000000000000000000103 272.0
LYD2_k127_2581475_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02003 - - 0.00000000000000000000000000000000000000000000000000000004042 218.0
LYD2_k127_2581475_7 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000000000000000007603 193.0
LYD2_k127_2581475_8 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000000000000000000000004023 192.0
LYD2_k127_2581475_9 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000001762 193.0
LYD2_k127_2599010_0 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 603.0
LYD2_k127_2599010_1 Glutathione S-transferase, C-terminal domain K00799,K11209 - 2.5.1.18 0.0000000000000000000000000001266 125.0
LYD2_k127_2599010_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000002405 87.0
LYD2_k127_2599010_3 - - - - 0.0000000000000007259 84.0
LYD2_k127_2604025_0 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 419.0
LYD2_k127_2604025_1 response regulator K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000001881 224.0
LYD2_k127_2604025_2 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000000007235 84.0
LYD2_k127_2604025_3 endonuclease activity K07451 - - 0.000005384 49.0
LYD2_k127_2613359_0 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 308.0
LYD2_k127_2613359_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000002913 168.0
LYD2_k127_2613359_2 Gaf domain - - - 0.00000000000003569 85.0
LYD2_k127_2613359_3 DNA uptake protein and related DNA-binding proteins K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000002105 62.0
LYD2_k127_2613359_5 Sel1-like repeats. K18180 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.0001163 51.0
LYD2_k127_2614591_0 translation initiation factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 595.0
LYD2_k127_2614591_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 556.0
LYD2_k127_2614591_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 489.0
LYD2_k127_2614861_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 501.0
LYD2_k127_2614861_1 PFAM Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000000000000000000001846 112.0
LYD2_k127_2614861_2 PIN domain K07064 - - 0.000000000000000000000002013 111.0
LYD2_k127_2614861_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0007555 45.0
LYD2_k127_2626239_0 AAA domain K01551 - 3.6.3.16 1.579e-258 812.0
LYD2_k127_2626239_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 430.0
LYD2_k127_2626239_10 Arsenical resistance operon trans-acting repressor ArsD - - - 0.00000000000000000000000000000000000000000000002405 179.0
LYD2_k127_2626239_11 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000000000001999 165.0
LYD2_k127_2626239_13 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000000000007584 124.0
LYD2_k127_2626239_2 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 412.0
LYD2_k127_2626239_3 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 355.0
LYD2_k127_2626239_4 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 325.0
LYD2_k127_2626239_5 phosphate ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 302.0
LYD2_k127_2626239_6 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000163 262.0
LYD2_k127_2626239_7 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000009211 203.0
LYD2_k127_2626239_8 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000002063 194.0
LYD2_k127_2626239_9 Regulatory protein, MerR - - - 0.000000000000000000000000000000000000000000000000001328 192.0
LYD2_k127_2637140_0 Multicopper oxidase K00368 - 1.7.2.1 1.98e-213 676.0
LYD2_k127_2637140_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005219 246.0
LYD2_k127_2637140_3 SCO1/SenC K07152 - - 0.0000000000000000000000000000000001324 140.0
LYD2_k127_265880_0 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 375.0
LYD2_k127_265880_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 314.0
LYD2_k127_265880_2 Phosphoesterase family - - - 0.00000000000000000000000000000000000000002024 164.0
LYD2_k127_265880_3 Belongs to the glycosyl hydrolase 26 family - - - 0.0000000000000000000000000000000000004557 159.0
LYD2_k127_265880_4 von Willebrand factor (vWF) type A domain - - - 0.00000001885 66.0
LYD2_k127_2667597_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1034.0
LYD2_k127_2667597_1 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 284.0
LYD2_k127_2667597_2 protein kinase activity - - - 0.00000000000000000000000000002463 128.0
LYD2_k127_2667597_3 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.00000002755 64.0
LYD2_k127_269571_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 351.0
LYD2_k127_269571_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001162 274.0
LYD2_k127_269571_2 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000007647 234.0
LYD2_k127_269571_3 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000002465 201.0
LYD2_k127_269571_4 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000000000000000000000000000000000000000000000002175 184.0
LYD2_k127_269571_5 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000002498 188.0
LYD2_k127_269571_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000109 126.0
LYD2_k127_269571_7 COG1214 Inactive homolog of metal-dependent proteases K01409,K14742 - 2.3.1.234 0.00000000000000000000003532 109.0
LYD2_k127_269571_9 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000002306 82.0
LYD2_k127_2698477_0 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 335.0
LYD2_k127_2698477_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001012 270.0
LYD2_k127_2698477_2 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000000000000000000007421 194.0
LYD2_k127_2698477_3 - - - - 0.00000000000000000000000000000000000007183 153.0
LYD2_k127_2716797_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 517.0
LYD2_k127_2716797_1 AAA ATPase domain - - - 0.0000000000000001879 85.0
LYD2_k127_2716797_2 Domain of unknown function DUF11 - - - 0.0000002501 63.0
LYD2_k127_2719274_0 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 370.0
LYD2_k127_2719274_1 Putative RNA methylase family UPF0020 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 346.0
LYD2_k127_2719274_2 OmpA family - - - 0.0000000000000000000000000000000000000000000000009985 189.0
LYD2_k127_2724610_1 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000001926 201.0
LYD2_k127_2724610_2 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000000000000000000000000000003375 202.0
LYD2_k127_2724610_3 Sigma-54 dependent response regulator K07714 - - 0.0000000009116 68.0
LYD2_k127_2724610_4 Belongs to the DNA polymerase type-Y family K03502 - - 0.00000000993 61.0
LYD2_k127_2726743_0 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009979 466.0
LYD2_k127_2726743_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 391.0
LYD2_k127_2726743_10 Secretion protein K01993 - - 0.0000000000113 68.0
LYD2_k127_2726743_11 Bacterial regulatory proteins, tetR family K09017 - - 0.000000003013 66.0
LYD2_k127_2726743_2 Helix-turn-helix domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 381.0
LYD2_k127_2726743_3 PFAM ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 317.0
LYD2_k127_2726743_4 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 310.0
LYD2_k127_2726743_5 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000009646 247.0
LYD2_k127_2726743_6 ubiquinone biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000619 205.0
LYD2_k127_2726743_7 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000008591 210.0
LYD2_k127_2726743_8 Hydrolase K17623 - 3.1.3.96 0.0000000000000000000000000000000000000000000000000000005298 200.0
LYD2_k127_2726743_9 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000004148 114.0
LYD2_k127_2738857_0 4Fe-4S binding domain - - - 6.42e-291 909.0
LYD2_k127_2738857_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 456.0
LYD2_k127_2738857_2 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 316.0
LYD2_k127_2738857_3 transcriptional regulator (MerR family) - - - 0.000000000000000000000000002179 122.0
LYD2_k127_2738857_4 - - - - 0.000000000000000006244 93.0
LYD2_k127_2738857_5 Acyltransferase K07003 - - 0.000000001591 65.0
LYD2_k127_2739748_0 protein containing a von Willebrand factor type A (vWA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000008744 231.0
LYD2_k127_2739748_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000001762 206.0
LYD2_k127_2739748_3 Flagellar Motor Protein K11892 - - 0.00000000000000002193 91.0
LYD2_k127_2739748_4 transposase activity - - - 0.000000000005482 76.0
LYD2_k127_274978_0 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008229 316.0
LYD2_k127_274978_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 293.0
LYD2_k127_274978_2 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000001057 156.0
LYD2_k127_274978_3 LysE type translocator - - - 0.0000000000000000007895 88.0
LYD2_k127_274978_4 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000003963 57.0
LYD2_k127_274978_5 Metallo-beta-lactamase superfamily K12574 - - 0.0000003984 57.0
LYD2_k127_2749863_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 4.16e-209 672.0
LYD2_k127_2749863_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 572.0
LYD2_k127_2749863_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000001963 66.0
LYD2_k127_2749863_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000397 49.0
LYD2_k127_2749863_4 Carbohydrate family 9 binding domain-like - - - 0.0009666 51.0
LYD2_k127_2767172_0 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000009197 190.0
LYD2_k127_2767172_1 - - - - 0.000000000000008867 78.0
LYD2_k127_2767172_2 - - - - 0.00000000000002652 83.0
LYD2_k127_2767172_3 FecR protein - - - 0.00002013 57.0
LYD2_k127_2772685_0 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 398.0
LYD2_k127_2772685_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 312.0
LYD2_k127_2772685_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004615 285.0
LYD2_k127_2772685_3 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000008977 143.0
LYD2_k127_2772685_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000007272 128.0
LYD2_k127_2773855_0 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 569.0
LYD2_k127_2773855_1 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 507.0
LYD2_k127_2773855_2 - - - - 0.00000000000000000000000000000001767 145.0
LYD2_k127_2773855_3 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000003336 101.0
LYD2_k127_2774405_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 611.0
LYD2_k127_2774405_1 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008236 329.0
LYD2_k127_2774405_2 HB1, ASXL, restriction endonuclease HTH domain - - - 0.000000000000000000000000000000000000001137 155.0
LYD2_k127_2774405_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000002296 144.0
LYD2_k127_2774405_4 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000001559 92.0
LYD2_k127_2788839_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 557.0
LYD2_k127_2788839_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 413.0
LYD2_k127_2788839_2 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 351.0
LYD2_k127_2788839_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001874 287.0
LYD2_k127_2788839_4 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000006094 230.0
LYD2_k127_2788839_5 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000000000000000000000000000000000000008069 216.0
LYD2_k127_2788839_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0034214,GO:0042802,GO:0043170,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0061799,GO:0065003,GO:0071704,GO:0071840,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.00000000000000000000000000000000000000000004927 172.0
LYD2_k127_2788839_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.000000005455 68.0
LYD2_k127_2788839_8 Cytochrome c K08685 - 1.4.9.1 0.000498 51.0
LYD2_k127_2802037_0 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 369.0
LYD2_k127_2802037_1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000003284 269.0
LYD2_k127_2802037_2 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001527 257.0
LYD2_k127_2802037_3 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000002524 211.0
LYD2_k127_2802037_4 - - - - 0.0000000000000000000000000000000000000000000000002617 191.0
LYD2_k127_2802037_5 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.000000000000000000000001378 109.0
LYD2_k127_2804864_0 PFAM isocitrate isopropylmalate dehydrogenase K00030,K07246 - 1.1.1.41,1.1.1.83,1.1.1.93,4.1.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 364.0
LYD2_k127_2804864_1 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 343.0
LYD2_k127_2804864_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 342.0
LYD2_k127_2804864_3 Glycosyl transferases group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 322.0
LYD2_k127_2804864_4 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000000000000000000000000000001556 222.0
LYD2_k127_2804864_5 membrane - - - 0.00000000000000000000000000000000000000000000003112 177.0
LYD2_k127_2804864_6 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000000000000000001373 157.0
LYD2_k127_2804864_7 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000002707 133.0
LYD2_k127_2804864_8 Type I phosphodiesterase / nucleotide pyrophosphatase K05310 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016254,GO:0016740,GO:0016772,GO:0016780,GO:0019538,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0051267,GO:0051377,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 - 0.000000000000001557 91.0
LYD2_k127_2804864_9 Domain of unknown function (DUF4142) K08995 - - 0.000105 52.0
LYD2_k127_2809807_0 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 1.696e-278 870.0
LYD2_k127_2809807_1 Pfam:DUF955 K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 535.0
LYD2_k127_2809807_2 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000005439 242.0
LYD2_k127_2809807_3 Peptidase family M28 - - - 0.00000000000000000000000003994 121.0
LYD2_k127_2809807_4 protein import - - - 0.0000000000007915 76.0
LYD2_k127_281045_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 416.0
LYD2_k127_281045_1 - - - - 0.0000000000000000000000000000000000000000000000000006322 196.0
LYD2_k127_281045_2 Transcriptional regulator K22105 - - 0.00000000000000005002 91.0
LYD2_k127_281045_3 fatty acid desaturase K00508 - 1.14.19.3 0.0006046 44.0
LYD2_k127_2815086_0 PFAM Amidase K01457,K01941 - 3.5.1.54,6.3.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 552.0
LYD2_k127_2815086_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 317.0
LYD2_k127_2815086_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 318.0
LYD2_k127_2815086_3 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000000003217 105.0
LYD2_k127_2818714_0 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000003478 150.0
LYD2_k127_2818714_1 amine dehydrogenase activity - - - 0.000000000000000000000000001453 129.0
LYD2_k127_2818714_2 Tetratricopeptide repeat - - - 0.000001252 60.0
LYD2_k127_2818714_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0008175 45.0
LYD2_k127_2831913_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 324.0
LYD2_k127_2831913_1 phosphotriesterase homology protein K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 319.0
LYD2_k127_283290_0 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 544.0
LYD2_k127_2840086_0 LysR family K03576 - - 0.0000000000000000000000000000000000000000000000000000000000005717 221.0
LYD2_k127_2840086_1 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000002388 175.0
LYD2_k127_2840086_2 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000001525 165.0
LYD2_k127_2840086_3 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000002398 143.0
LYD2_k127_2840086_4 protein conserved in bacteria - - - 0.00000000000003877 74.0
LYD2_k127_285576_0 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002452 248.0
LYD2_k127_285576_1 TonB dependent receptor - - - 0.00009966 55.0
LYD2_k127_2859111_0 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 355.0
LYD2_k127_2859111_1 TIGRFAM cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 333.0
LYD2_k127_2859111_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002367 280.0
LYD2_k127_2859111_3 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000000000000000000000000000000000000000002137 206.0
LYD2_k127_2859111_4 - - - - 0.0000000000000000000000000000000000000005386 161.0
LYD2_k127_2859111_5 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000007658 112.0
LYD2_k127_2859111_6 - - - - 0.00000001307 67.0
LYD2_k127_2877620_1 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002196 290.0
LYD2_k127_2877620_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000003261 217.0
LYD2_k127_2877620_4 - - - - 0.00000000000000000000236 109.0
LYD2_k127_287853_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 3.965e-277 878.0
LYD2_k127_287853_1 ABC transporter K06147 - - 1.579e-212 690.0
LYD2_k127_287853_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K03802 - 6.3.2.29,6.3.2.30 2.241e-202 658.0
LYD2_k127_287853_3 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000001317 201.0
LYD2_k127_287853_4 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000004062 182.0
LYD2_k127_287853_5 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000006425 157.0
LYD2_k127_287853_6 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000002733 112.0
LYD2_k127_287853_7 MatE - - - 0.00000000000000000006521 98.0
LYD2_k127_2881376_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 455.0
LYD2_k127_2881376_1 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 353.0
LYD2_k127_2881376_2 KR domain K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003223 252.0
LYD2_k127_2881376_3 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000002232 140.0
LYD2_k127_2881376_4 Thioesterase-like superfamily - - - 0.000000000000000000001167 102.0
LYD2_k127_2888592_0 COG0659 Sulfate permease and related transporters (MFS superfamily) K01673,K03321 - 4.2.1.1 1.461e-214 681.0
LYD2_k127_2888592_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 530.0
LYD2_k127_2888592_2 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 406.0
LYD2_k127_2888592_3 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 385.0
LYD2_k127_2888592_4 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005224 244.0
LYD2_k127_2888592_6 Protein of unknown function (DUF3309) - - - 0.00000000000485 68.0
LYD2_k127_2907900_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 391.0
LYD2_k127_2907900_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003829 269.0
LYD2_k127_2907900_2 PEGA domain K02014 - - 0.0000000000000000000000000000000000000000000000000000000002616 208.0
LYD2_k127_2907900_3 Family membership K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000003016 208.0
LYD2_k127_2907900_4 Family membership K08884,K12132 - 2.7.11.1 0.000000000000000000000002548 115.0
LYD2_k127_2908303_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 513.0
LYD2_k127_2908303_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 346.0
LYD2_k127_2908303_2 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009476 250.0
LYD2_k127_2908303_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000006019 144.0
LYD2_k127_2918266_0 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000001175 210.0
LYD2_k127_2918266_1 Doxx family K15977 - - 0.000000000000000000000000000000000000000000001242 172.0
LYD2_k127_2918266_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000007789 98.0
LYD2_k127_2918266_3 - K07018 - - 0.00000000000002274 81.0
LYD2_k127_2918266_4 EamA-like transporter family K03298 - - 0.00000000008419 73.0
LYD2_k127_2918266_5 Cysteine-rich motif following a subset of SET domains K06101,K16675 - 2.1.1.43,2.3.1.225 0.000000006527 69.0
LYD2_k127_2924026_0 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 574.0
LYD2_k127_2924026_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 537.0
LYD2_k127_2924026_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 528.0
LYD2_k127_2924026_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 434.0
LYD2_k127_2924026_5 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000002583 204.0
LYD2_k127_2924026_6 Thiamine biosynthesis K03154 - - 0.00000000000000000009591 96.0
LYD2_k127_2931829_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 422.0
LYD2_k127_2931829_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 360.0
LYD2_k127_2931829_2 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 327.0
LYD2_k127_2931829_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000004452 244.0
LYD2_k127_2931829_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000001291 216.0
LYD2_k127_2932630_0 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 505.0
LYD2_k127_2932630_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 321.0
LYD2_k127_2932630_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000003689 221.0
LYD2_k127_2932630_3 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000000000001048 143.0
LYD2_k127_2932630_4 Hemerythrin HHE cation binding domain - - - 0.0000000000000000005815 97.0
LYD2_k127_2932630_5 Kazal type serine protease inhibitors - - - 0.0000000000001541 81.0
LYD2_k127_2932630_6 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000005747 64.0
LYD2_k127_2932630_7 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000003532 62.0
LYD2_k127_2938089_0 TPR repeat Sel1-like repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2 - - - 6.671e-203 669.0
LYD2_k127_2938089_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000438 205.0
LYD2_k127_2939354_0 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 410.0
LYD2_k127_2939354_2 Glycosyl hydrolase family 53 - - - 0.000000000005974 78.0
LYD2_k127_2947024_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 502.0
LYD2_k127_2947024_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835,K01840 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 465.0
LYD2_k127_2947024_2 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 439.0
LYD2_k127_2948899_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 436.0
LYD2_k127_2948899_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000003504 248.0
LYD2_k127_2948899_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.0000000000000000000000000000000000000000001991 169.0
LYD2_k127_2948899_3 CAAX protease self-immunity K06177,K07052,K09696 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000001169 151.0
LYD2_k127_29551_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 381.0
LYD2_k127_29551_1 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 345.0
LYD2_k127_29551_2 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.0000000000000000000000000000000000000000000000000000000000000003599 225.0
LYD2_k127_29551_3 PFAM binding-protein-dependent transport systems inner membrane component K02033,K15581 - - 0.0000000000000000000000000000000002137 145.0
LYD2_k127_29551_5 - - - - 0.000000000000000000000000341 114.0
LYD2_k127_29551_7 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000004907 104.0
LYD2_k127_29551_8 HEAT repeats - - - 0.0000000001298 73.0
LYD2_k127_2958097_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.501e-228 724.0
LYD2_k127_2958097_1 chitin catabolic process K01727,K13381 GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005623,GO:0008843,GO:0016787,GO:0016798,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.2.1.14,3.2.1.17,4.2.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 392.0
LYD2_k127_2958097_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000003098 203.0
LYD2_k127_2958097_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000001069 178.0
LYD2_k127_2958097_5 - - - - 0.0002055 53.0
LYD2_k127_295839_0 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 347.0
LYD2_k127_295839_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002106 244.0
LYD2_k127_295839_2 N-succinyltransferase beta subunit K00673 - 2.3.1.109 0.0000000000000000000009623 99.0
LYD2_k127_295839_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000001135 95.0
LYD2_k127_295839_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000001163 68.0
LYD2_k127_2968346_0 phospholipase C K01114 - 3.1.4.3 5.938e-287 902.0
LYD2_k127_2968346_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 337.0
LYD2_k127_2968346_2 glutathione transferase activity K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001593 255.0
LYD2_k127_2969102_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000009992 164.0
LYD2_k127_2969102_1 Phosphate-selective porin O and P - - - 0.00000000000000000000000000003396 133.0
LYD2_k127_2969102_2 - - - - 0.00000000000000000000000005862 123.0
LYD2_k127_2969390_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000003748 208.0
LYD2_k127_2969390_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K03407 - 2.7.13.3 0.000000000000000000000000000000000000000002254 173.0
LYD2_k127_2969390_2 phosphate ion binding - - - 0.0000000000000000000000002981 115.0
LYD2_k127_2971623_0 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000006693 184.0
LYD2_k127_2971623_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000003463 81.0
LYD2_k127_2985323_0 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000001073 240.0
LYD2_k127_2985323_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000001002 127.0
LYD2_k127_2985323_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000001484 127.0
LYD2_k127_2985323_4 Solute carrier family 27 (fatty acid transporter), member 2a K08746,K08748,K08749 GO:0000038,GO:0001561,GO:0001676,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004467,GO:0005102,GO:0005215,GO:0005319,GO:0005342,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005783,GO:0005788,GO:0005789,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006638,GO:0006639,GO:0006641,GO:0006642,GO:0006694,GO:0006699,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006887,GO:0006955,GO:0006996,GO:0007031,GO:0008028,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008509,GO:0008514,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009925,GO:0009987,GO:0010876,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015245,GO:0015318,GO:0015645,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0015908,GO:0015909,GO:0015911,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016192,GO:0016323,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0019395,GO:0019752,GO:0019899,GO:0022857,GO:0030141,GO:0030176,GO:0030258,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031227,GO:0031231,GO:0031300,GO:0031301,GO:0031410,GO:0031903,GO:0031957,GO:0031974,GO:0031982,GO:0031984,GO:0032787,GO:0032940,GO:0032991,GO:0033036,GO:0033365,GO:0034220,GO:0034440,GO:0034613,GO:0035579,GO:0036230,GO:0042119,GO:0042175,GO:0042579,GO:0042581,GO:0042760,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044539,GO:0044877,GO:0045055,GO:0045178,GO:0045184,GO:0045321,GO:0046394,GO:0046395,GO:0046486,GO:0046903,GO:0046907,GO:0046942,GO:0046943,GO:0046950,GO:0046951,GO:0047747,GO:0050197,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055114,GO:0070013,GO:0070251,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072329,GO:0072330,GO:0072594,GO:0072662,GO:0072663,GO:0097089,GO:0097708,GO:0098588,GO:0098590,GO:0098656,GO:0098805,GO:0098827,GO:0099503,GO:1901360,GO:1901362,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1902001,GO:1902224,GO:1903825,GO:1905039 6.2.1.3,6.2.1.7 0.0000000000000000001901 91.0
LYD2_k127_299269_0 Cytochrome C and Quinol oxidase polypeptide I K15862 - 1.9.3.1 0.0 1091.0
LYD2_k127_299269_1 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 432.0
LYD2_k127_299269_2 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 389.0
LYD2_k127_299269_3 PFAM Cytochrome c, class I K00406 - - 0.00000000000000000000000000000000000001363 156.0
LYD2_k127_299269_4 OsmC-like protein - - - 0.0000000000000000000000000000001812 129.0
LYD2_k127_299269_5 Universal stress protein - - - 0.0000000000000000000000000000006863 127.0
LYD2_k127_299269_6 Universal stress protein - - - 0.0000000000000000000007367 104.0
LYD2_k127_299269_7 Protein of unknown function (DUF2892) - - - 0.000000000000001515 89.0
LYD2_k127_299269_8 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.00006789 49.0
LYD2_k127_2993300_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000116 258.0
LYD2_k127_2993300_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000005255 200.0
LYD2_k127_3000622_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 436.0
LYD2_k127_3000622_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000007992 248.0
LYD2_k127_3000622_2 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000004898 211.0
LYD2_k127_3000622_4 Protein of unknown function (DUF1549) - - - 0.00000000000000000008296 102.0
LYD2_k127_3000622_5 PIN domain - - - 0.00000000001283 74.0
LYD2_k127_3000622_6 - - - - 0.000000005351 64.0
LYD2_k127_3002652_0 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 563.0
LYD2_k127_3002652_1 Biotin-requiring enzyme - - - 0.00000000000000000000000000000000029 138.0
LYD2_k127_3002652_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000004653 64.0
LYD2_k127_3002652_3 Histidine kinase - - - 0.000003349 51.0
LYD2_k127_300492_0 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 6.102e-316 983.0
LYD2_k127_300492_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 541.0
LYD2_k127_300492_2 - - - - 0.000000000000002075 84.0
LYD2_k127_3005815_0 glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 494.0
LYD2_k127_3005815_1 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 390.0
LYD2_k127_3005815_10 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000009245 108.0
LYD2_k127_3005815_11 polysaccharide export K01991 - - 0.000000002229 65.0
LYD2_k127_3005815_2 Glycosyl transferases group 1 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 301.0
LYD2_k127_3005815_3 -O-antigen K02847,K13009 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001554 286.0
LYD2_k127_3005815_4 Transferase hexapeptide repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004951 258.0
LYD2_k127_3005815_5 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000002742 206.0
LYD2_k127_3005815_6 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000000000000006347 203.0
LYD2_k127_3005815_7 GMC family oxidoreductase - - - 0.0000000000000000000000000000000000000000188 172.0
LYD2_k127_3005815_8 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000002805 160.0
LYD2_k127_3005815_9 Phosphopantetheine attachment site - - - 0.0000000000000000000000000111 110.0
LYD2_k127_3006323_0 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 499.0
LYD2_k127_3006323_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000002299 194.0
LYD2_k127_3012203_0 SMART Elongator protein 3 MiaB NifB - - - 0.0 1145.0
LYD2_k127_3015984_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.054e-276 857.0
LYD2_k127_3015984_1 Bacterial regulatory protein, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 419.0
LYD2_k127_3015984_2 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000005325 111.0
LYD2_k127_3027651_0 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 336.0
LYD2_k127_3027651_1 alpha/beta hydrolase fold K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000005023 241.0
LYD2_k127_3027651_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000002217 233.0
LYD2_k127_3038507_0 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 440.0
LYD2_k127_3038507_1 chalcone and stilbene synthase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 303.0
LYD2_k127_3038507_2 Methionine biosynthesis protein MetW K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
LYD2_k127_3038507_3 Diacylglycerol acyltransferase - - - 0.0000000000000000000000000000000000000000000002341 183.0
LYD2_k127_3038507_4 - - - - 0.000000000000000000000000002688 115.0
LYD2_k127_3038507_5 Alpha beta hydrolase - - - 0.000000000000000000000009213 115.0
LYD2_k127_3046408_0 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 511.0
LYD2_k127_3046408_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003452 280.0
LYD2_k127_3053308_0 Ribonuclease E/G family K08301 - - 1.062e-204 649.0
LYD2_k127_3053308_1 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 365.0
LYD2_k127_3053308_2 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 287.0
LYD2_k127_3053308_3 PilZ domain - - - 0.000000000000000000000000000000000000000007294 156.0
LYD2_k127_3053308_4 YaeQ - - - 0.0000000000000000000000000000000000000005864 155.0
LYD2_k127_3054812_0 two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 466.0
LYD2_k127_3054812_1 nitric oxide dioxygenase activity K03406 - - 0.000000000000000000000000000000000000001615 151.0
LYD2_k127_3054812_2 - - - - 0.00000000000000000000000000002371 123.0
LYD2_k127_3065682_0 oxidoreductase activity - - - 0.000000000000000000000000000002636 138.0
LYD2_k127_3066157_0 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 381.0
LYD2_k127_3066157_1 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 337.0
LYD2_k127_3066157_2 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000001139 248.0
LYD2_k127_3066157_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000001419 234.0
LYD2_k127_3066157_4 nodulation K00612 - - 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
LYD2_k127_3066157_5 Protein of unknown function (DUF4080) K04034 - 1.21.98.3 0.00000000000000000000000000000000000000003136 173.0
LYD2_k127_3066157_6 Glycosyl transferase, family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000001056 150.0
LYD2_k127_3084519_0 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000001051 209.0
LYD2_k127_3084519_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000008134 212.0
LYD2_k127_3084519_2 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.0000000000000007143 85.0
LYD2_k127_3097564_0 peptidase U62 modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 499.0
LYD2_k127_3097564_1 peptidase U62 modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005406 273.0
LYD2_k127_3097564_2 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006803 248.0
LYD2_k127_3102822_0 Luciferase-like monooxygenase - - - 4.372e-321 1018.0
LYD2_k127_3109600_0 PFAM Prenyltransferase squalene oxidase K01852 - 5.4.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 489.0
LYD2_k127_3109600_1 FAD binding domain K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 294.0
LYD2_k127_3109600_2 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000007798 279.0
LYD2_k127_3109600_3 Rieske 2Fe2S - - - 0.000002443 50.0
LYD2_k127_3109600_4 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) K17513,K22244 - - 0.000006589 54.0
LYD2_k127_3113509_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008859 368.0
LYD2_k127_3113509_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 330.0
LYD2_k127_3113509_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002005 280.0
LYD2_k127_3113509_3 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002572 218.0
LYD2_k127_3113509_4 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000001854 187.0
LYD2_k127_3113509_5 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000103 170.0
LYD2_k127_3113509_6 WHG domain - - - 0.0000000000000000000000003489 121.0
LYD2_k127_3113509_7 PFAM Major Facilitator Superfamily - - - 0.000000001551 70.0
LYD2_k127_3120625_0 Flavin containing amine oxidoreductase - - - 1.711e-207 656.0
LYD2_k127_3120625_1 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000003011 191.0
LYD2_k127_3120625_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000001243 181.0
LYD2_k127_3120625_3 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000002709 152.0
LYD2_k127_3120625_4 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000006969 128.0
LYD2_k127_3120625_6 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.00001213 51.0
LYD2_k127_3124659_0 Male sterility protein K01897 - 6.2.1.3 0.0 1057.0
LYD2_k127_3124659_1 Domain of unknown function (DUF2088) - - - 7.699e-267 832.0
LYD2_k127_3124659_2 Belongs to the HpcH HpaI aldolase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 552.0
LYD2_k127_3124659_3 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 462.0
LYD2_k127_3124659_4 Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 337.0
LYD2_k127_3124659_5 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 329.0
LYD2_k127_3124659_6 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000004938 205.0
LYD2_k127_3124659_7 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000005482 188.0
LYD2_k127_3124659_8 Transcriptional Regulator, AraC family - - - 0.000000000000000000000000000000000000000000000001649 190.0
LYD2_k127_3124705_0 mannose-ethanolamine phosphotransferase activity - - - 4.294e-200 647.0
LYD2_k127_3124705_1 Type II restriction enzyme, methylase subunits - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 478.0
LYD2_k127_3124705_10 Amidohydrolase K07045 - - 0.000000000000000000000000000000002189 133.0
LYD2_k127_3124705_11 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000007568 139.0
LYD2_k127_3124705_2 3-dehydroquinate synthase K01735,K19969 - 4.2.3.152,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 457.0
LYD2_k127_3124705_3 myo-inosose-2 dehydratase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 411.0
LYD2_k127_3124705_4 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 392.0
LYD2_k127_3124705_5 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 317.0
LYD2_k127_3124705_6 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004355 273.0
LYD2_k127_3124705_7 Psort location Cytoplasmic, score K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000001621 253.0
LYD2_k127_3124705_8 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000001291 255.0
LYD2_k127_3124705_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000004954 243.0
LYD2_k127_3127008_0 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 346.0
LYD2_k127_3127008_1 Alpha beta hydrolase K18092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 310.0
LYD2_k127_3127008_2 PFAM TraB determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000317 253.0
LYD2_k127_3127008_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00796,K00950,K01633,K13940 - 1.13.11.81,2.5.1.15,2.7.6.3,4.1.2.25,5.1.99.8 0.00000000024 69.0
LYD2_k127_3127008_5 - - - - 0.0000000004926 64.0
LYD2_k127_3131530_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.916e-302 933.0
LYD2_k127_3131530_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 313.0
LYD2_k127_3131530_2 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001939 298.0
LYD2_k127_3131530_3 PFAM Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000001624 189.0
LYD2_k127_3131530_4 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000000000001712 162.0
LYD2_k127_3131530_5 Methyltransferase domain - - - 0.0000000000000000000001145 111.0
LYD2_k127_3131530_6 Alpha beta hydrolase - - - 0.0000000000000000002349 102.0
LYD2_k127_3131530_7 Methyltransferase domain - - - 0.0000166 52.0
LYD2_k127_31463_0 spermidine synthase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 429.0
LYD2_k127_31463_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000001604 162.0
LYD2_k127_3159324_0 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 491.0
LYD2_k127_3159324_1 TIGRFAM sulfate ABC transporter, inner membrane subunit CysT K02046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 368.0
LYD2_k127_3159324_10 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000826 168.0
LYD2_k127_3159324_2 Sulfate ABC transporter, inner membrane subunit CysW K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 370.0
LYD2_k127_3159324_4 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 351.0
LYD2_k127_3159324_5 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006834 248.0
LYD2_k127_3159324_6 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02017,K02045,K15497 - 3.6.3.25,3.6.3.29,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000004076 233.0
LYD2_k127_3159324_7 COG0625 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000002453 211.0
LYD2_k127_3159324_8 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000001614 187.0
LYD2_k127_3159324_9 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000003137 171.0
LYD2_k127_3188670_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0 1044.0
LYD2_k127_3188670_1 COG3911 Predicted ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000001715 226.0
LYD2_k127_3188670_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000006404 139.0
LYD2_k127_3188670_3 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000003483 146.0
LYD2_k127_3188670_4 AMP binding - GO:0008150,GO:0040007 - 0.000000000000000000000000000001292 133.0
LYD2_k127_3188670_5 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000001296 87.0
LYD2_k127_3194152_0 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 388.0
LYD2_k127_3194152_1 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000001754 135.0
LYD2_k127_3194152_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000008738 68.0
LYD2_k127_3194152_3 Protein of unknown function (DUF1778) - - - 0.0000000911 59.0
LYD2_k127_3204342_0 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000001767 169.0
LYD2_k127_3204342_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000408 146.0
LYD2_k127_3204342_2 ChrR Cupin-like domain - - - 0.00000000000000000000000011 114.0
LYD2_k127_3204342_3 Sulfatase K01133 - 3.1.6.6 0.000001389 53.0
LYD2_k127_3207714_0 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 489.0
LYD2_k127_3207714_1 Peptidase inhibitor I9 K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 314.0
LYD2_k127_3207714_2 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000006202 225.0
LYD2_k127_3207714_3 oxidoreductase activity K07114 - - 0.0000000000000000000000000000003324 141.0
LYD2_k127_3207714_4 ThiS family K03636 - - 0.00000000000000000000000000009591 118.0
LYD2_k127_3207714_5 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000001321 121.0
LYD2_k127_3207714_6 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000000000732 114.0
LYD2_k127_3207714_7 complement activation, lectin pathway K03992,K03993 GO:0001867,GO:0002252,GO:0002253,GO:0002376,GO:0002673,GO:0002682,GO:0002683,GO:0002684,GO:0002697,GO:0002698,GO:0002920,GO:0002921,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0006950,GO:0006952,GO:0006955,GO:0006956,GO:0006959,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009892,GO:0010468,GO:0010605,GO:0010629,GO:0010955,GO:0016192,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0030162,GO:0030449,GO:0031323,GO:0031324,GO:0031347,GO:0031974,GO:0031981,GO:0032101,GO:0032268,GO:0032269,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044238,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0045861,GO:0045916,GO:0046872,GO:0046983,GO:0048306,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050727,GO:0050776,GO:0050777,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070011,GO:0070013,GO:0070613,GO:0071704,GO:0072376,GO:0080090,GO:0080134,GO:0098657,GO:0140096,GO:1901564,GO:1903317,GO:1903318,GO:2000257,GO:2000258 3.4.21.104 0.000000000000000000008783 108.0
LYD2_k127_3207714_8 Tetratricopeptide repeat - - - 0.0002773 49.0
LYD2_k127_3217698_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 392.0
LYD2_k127_3217698_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00004733 48.0
LYD2_k127_3236223_0 Bacterial regulatory protein, Fis family K02584 - - 0.0 1082.0
LYD2_k127_3236223_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 601.0
LYD2_k127_3236223_10 Sigma-70, region 4 K02405 - - 0.00000000000000000000000000000000000000005799 160.0
LYD2_k127_3236223_11 - - - - 0.00000000000000000000000000000004439 126.0
LYD2_k127_3236223_13 protein kinase activity - - - 0.0000000000000007375 89.0
LYD2_k127_3236223_2 DNA helicase K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 592.0
LYD2_k127_3236223_3 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 408.0
LYD2_k127_3236223_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 389.0
LYD2_k127_3236223_6 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 309.0
LYD2_k127_3236223_7 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 310.0
LYD2_k127_3236223_8 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000002297 271.0
LYD2_k127_3236223_9 enterobactin catabolic process K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000001526 240.0
LYD2_k127_3244155_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 307.0
LYD2_k127_3244155_1 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001694 240.0
LYD2_k127_3244155_4 AntiSigma factor - - - 0.00000001133 66.0
LYD2_k127_324638_0 glucose-6-phosphate dehydrogenase activity K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 320.0
LYD2_k127_324638_1 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000003437 141.0
LYD2_k127_324638_2 Protein conserved in bacteria - - - 0.0000000005937 68.0
LYD2_k127_3246690_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K12955 - 3.6.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000001116 258.0
LYD2_k127_3246690_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000506 240.0
LYD2_k127_3246690_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000005207 203.0
LYD2_k127_3246690_3 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00000000000000000000000000000000000000000000006764 185.0
LYD2_k127_3246690_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000001158 160.0
LYD2_k127_3246690_5 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000002926 132.0
LYD2_k127_3246690_6 response regulator K02481,K07713 - - 0.00000000000000000000000004473 125.0
LYD2_k127_3246690_7 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.0000000000006757 80.0
LYD2_k127_3260435_0 Serine Threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 361.0
LYD2_k127_3260435_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000002585 166.0
LYD2_k127_3260435_2 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000007199 78.0
LYD2_k127_3260435_4 Beta-L-arabinofuranosidase, GH127 - - - 0.0000002995 57.0
LYD2_k127_3260435_5 cell envelope organization K05807,K08309 - - 0.00002067 56.0
LYD2_k127_3275770_0 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 2.601e-275 863.0
LYD2_k127_3275770_1 Sigma-54 dependent transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 457.0
LYD2_k127_3275770_2 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 295.0
LYD2_k127_3275770_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000227 192.0
LYD2_k127_3275770_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000004848 99.0
LYD2_k127_3277565_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000008638 232.0
LYD2_k127_3277565_1 - - - - 0.000000000000000000000000000000000002043 150.0
LYD2_k127_3277565_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000002768 142.0
LYD2_k127_3277565_3 Worm-specific repeat type 1 - GO:0002009,GO:0002165,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0007275,GO:0007424,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0007591,GO:0008150,GO:0008362,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0022404,GO:0031012,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040003,GO:0040005,GO:0042303,GO:0042335,GO:0044421,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0060429,GO:0060541,GO:0060562,GO:0065007,GO:0065008,GO:0090066 - 0.000001005 59.0
LYD2_k127_3296041_0 Leucine carboxyl methyltransferase - - - 0.000000000000000000000000000000000175 144.0
LYD2_k127_3296041_1 Protein of Unknown function (DUF2784) - - - 0.0000000000000000001971 93.0
LYD2_k127_3296041_2 - - - - 0.0000000000000133 87.0
LYD2_k127_3298467_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.433e-309 966.0
LYD2_k127_3298467_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.83e-267 870.0
LYD2_k127_3298467_2 PFAM Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 403.0
LYD2_k127_3298467_3 Belongs to the glutamate synthase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 300.0
LYD2_k127_3298467_4 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000003857 203.0
LYD2_k127_3298467_5 Protein conserved in bacteria - - - 0.0000000000000000144 87.0
LYD2_k127_3298467_7 PFAM Major Facilitator Superfamily K08177 - - 0.0000001251 53.0
LYD2_k127_3299842_0 DEAD DEAH box helicase K03724 - - 6.374e-216 692.0
LYD2_k127_3299842_1 Predicted membrane protein (DUF2254) - - - 2.963e-195 635.0
LYD2_k127_3299842_2 - - - - 0.00000000000000000000000000000007656 133.0
LYD2_k127_3299842_3 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000005905 63.0
LYD2_k127_3299842_4 cellulose synthase K00694,K20541 - 2.4.1.12 0.0007884 49.0
LYD2_k127_3309998_0 Tetratricopeptide repeat - - - 6.452e-241 774.0
LYD2_k127_3309998_1 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007759 402.0
LYD2_k127_3310272_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 412.0
LYD2_k127_3310272_1 Chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001262 274.0
LYD2_k127_3310272_2 Belongs to the ParB family K03497 - - 0.000000000000000000001276 97.0
LYD2_k127_3345023_0 sulfuric ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000004414 218.0
LYD2_k127_3345023_1 RibD C-terminal domain K00082,K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000002513 203.0
LYD2_k127_3345023_2 RF-1 domain K15034 - - 0.0000000000000000000000000000000001543 136.0
LYD2_k127_3345023_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000019 51.0
LYD2_k127_3350962_0 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 1.136e-272 856.0
LYD2_k127_3350962_1 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 453.0
LYD2_k127_3350962_2 imidazoleglycerol-phosphate synthase activity K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 373.0
LYD2_k127_3350962_3 phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003512 277.0
LYD2_k127_3350962_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000003453 236.0
LYD2_k127_3350962_5 ABC transporter, ATP-binding protein K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000001052 204.0
LYD2_k127_3350962_6 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005835,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009941,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016631,GO:0019752,GO:0031967,GO:0031975,GO:0032787,GO:0032991,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0072330,GO:1901576 1.3.1.10,1.3.1.9 0.0000001288 54.0
LYD2_k127_3352259_0 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002949 286.0
LYD2_k127_3352259_1 Outer membrane efflux protein - - - 0.0000000000000000000000000004164 119.0
LYD2_k127_3352259_2 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000007842 83.0
LYD2_k127_3352259_3 10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity K01253,K22368,K22369 GO:0003674,GO:0003824,GO:0004301,GO:0005575,GO:0005622,GO:0005623,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016801,GO:0016803,GO:0018904,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0097176,GO:1901360 3.3.2.10,3.3.2.9 0.0000000004215 72.0
LYD2_k127_3357089_0 Glycosyl hydrolases family 43 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002787 287.0
LYD2_k127_3357089_1 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000001389 164.0
LYD2_k127_3357089_2 Integrase - - - 0.0001812 44.0
LYD2_k127_3358668_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 303.0
LYD2_k127_3358668_1 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000002125 155.0
LYD2_k127_3358668_2 - - - - 0.0000000000000000000000000000117 133.0
LYD2_k127_3371997_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.241e-201 650.0
LYD2_k127_3371997_1 NAD dependent epimerase/dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 428.0
LYD2_k127_3371997_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 374.0
LYD2_k127_3371997_3 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000832 211.0
LYD2_k127_3371997_4 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000001943 208.0
LYD2_k127_3371997_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000001714 68.0
LYD2_k127_3372031_0 Domain of unknown function (DUF4398) - - - 0.00000000000000000000000000000000000000000000000000000000000000457 231.0
LYD2_k127_3372031_1 SURF4 family K15977 - - 0.0000000000000000000000000000000000000003432 154.0
LYD2_k127_3372031_2 Domain of unknown function (DUF4398) - - - 0.0000000000000009281 83.0
LYD2_k127_3372031_3 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000006927 65.0
LYD2_k127_3384723_0 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 1.138e-247 772.0
LYD2_k127_3384723_1 Transposase IS66 family K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 559.0
LYD2_k127_3384723_10 oxidoreductase activity K07114 - - 0.0000000000000001362 93.0
LYD2_k127_3384723_11 COG2963, Transposase and inactivated derivatives - - - 0.00001029 52.0
LYD2_k127_3384723_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 329.0
LYD2_k127_3384723_3 Family membership K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000006402 280.0
LYD2_k127_3384723_4 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003701 275.0
LYD2_k127_3384723_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000001647 196.0
LYD2_k127_3384723_6 methyltransferase - - - 0.0000000000000000000000000000000000000000000000002368 185.0
LYD2_k127_3384723_7 response regulator, receiver K02485 - - 0.0000000000000000000000000000000000000000007361 160.0
LYD2_k127_3384723_8 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000001069 156.0
LYD2_k127_3384723_9 PFAM IS66 Orf2 family protein K07484 - - 0.00000000000000000000000000000000001256 138.0
LYD2_k127_3385871_0 DNA RNA helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 624.0
LYD2_k127_3385871_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 349.0
LYD2_k127_3385871_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000003442 218.0
LYD2_k127_3385871_3 PFAM PIN domain - - - 0.0000000000000000000000000000003137 130.0
LYD2_k127_3385871_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000001577 75.0
LYD2_k127_3387709_0 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 470.0
LYD2_k127_3387709_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 423.0
LYD2_k127_3387709_10 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000001984 67.0
LYD2_k127_3387709_2 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 374.0
LYD2_k127_3387709_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 350.0
LYD2_k127_3387709_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003102 300.0
LYD2_k127_3387709_5 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006358 276.0
LYD2_k127_3387709_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002788 251.0
LYD2_k127_3387709_7 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000004426 177.0
LYD2_k127_3387709_9 - - - - 0.0000000000000000000005841 100.0
LYD2_k127_3396578_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.88e-214 676.0
LYD2_k127_3396578_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 614.0
LYD2_k127_3396578_10 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000000000004184 138.0
LYD2_k127_3396578_11 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 K18586 - - 0.000000000000000000000000000000006293 138.0
LYD2_k127_3396578_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 575.0
LYD2_k127_3396578_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 540.0
LYD2_k127_3396578_4 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 471.0
LYD2_k127_3396578_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 455.0
LYD2_k127_3396578_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 360.0
LYD2_k127_3396578_7 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 343.0
LYD2_k127_3396578_8 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000000000000003333 214.0
LYD2_k127_3396578_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000002467 136.0
LYD2_k127_3408101_0 DEAD DEAH box helicase domain protein K03724 - - 1.39e-290 910.0
LYD2_k127_3408101_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309,K11102 - - 2.947e-195 622.0
LYD2_k127_3408101_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase K00322 - 1.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 424.0
LYD2_k127_3408101_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000151 259.0
LYD2_k127_3408101_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000001 239.0
LYD2_k127_3408101_5 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.000000000000000000000000000000000000000000000000000000005645 207.0
LYD2_k127_3408101_6 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000001002 198.0
LYD2_k127_3408101_7 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000001441 154.0
LYD2_k127_3408101_9 Diguanylate cyclase K13069 - 2.7.7.65 0.00000000002466 66.0
LYD2_k127_3424275_0 Peptidase family M1 domain K01256 - 3.4.11.2 7.325e-275 882.0
LYD2_k127_3424275_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 332.0
LYD2_k127_3424275_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008502 275.0
LYD2_k127_3424275_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000008024 93.0
LYD2_k127_3424275_5 - - - - 0.00002712 53.0
LYD2_k127_3424275_6 toxin-antitoxin pair type II binding - - - 0.0001483 48.0
LYD2_k127_3445255_0 short-chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 348.0
LYD2_k127_3445255_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 328.0
LYD2_k127_3445255_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002571 278.0
LYD2_k127_3445255_3 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003962 237.0
LYD2_k127_3445255_4 Nucleotidyltransferase K09962 - - 0.0000000000000000000000000000000000000000000259 167.0
LYD2_k127_3445255_5 Belongs to the peptidase S8 family - - - 0.000000000000000000000000001043 130.0
LYD2_k127_3445255_6 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000008212 105.0
LYD2_k127_3445255_7 cell envelope organization K05807,K08309 - - 0.0000000002719 68.0
LYD2_k127_3452485_0 Pyruvate kinase, barrel domain K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 509.0
LYD2_k127_3452485_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000003369 267.0
LYD2_k127_3452485_2 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000004851 237.0
LYD2_k127_3452485_3 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000009146 221.0
LYD2_k127_3452485_4 Endonuclease/Exonuclease/phosphatase family - GO:0001906,GO:0003674,GO:0003824,GO:0004620,GO:0004767,GO:0005215,GO:0005575,GO:0005623,GO:0006629,GO:0006643,GO:0006644,GO:0006665,GO:0006684,GO:0006685,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009279,GO:0009395,GO:0009987,GO:0010033,GO:0016020,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0019637,GO:0019835,GO:0019867,GO:0030149,GO:0030312,GO:0030313,GO:0031640,GO:0031975,GO:0033993,GO:0034641,GO:0035821,GO:0042221,GO:0042578,GO:0043603,GO:0044179,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044364,GO:0044419,GO:0044462,GO:0044464,GO:0044764,GO:0046434,GO:0046466,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051715,GO:0051716,GO:0061751,GO:0070887,GO:0071310,GO:0071396,GO:0071702,GO:0071704,GO:0071944,GO:0097164,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000002858 189.0
LYD2_k127_3452485_5 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000006672 179.0
LYD2_k127_3452485_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000003038 177.0
LYD2_k127_3452485_7 peptidyl-tyrosine sulfation - - - 0.00000005064 59.0
LYD2_k127_3452485_8 Glycerophosphoryl diester phosphodiesterase family - - - 0.000000231 63.0
LYD2_k127_346719_0 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 459.0
LYD2_k127_346719_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 418.0
LYD2_k127_346719_10 Domain of unknown function DUF11 - - - 0.00000001143 66.0
LYD2_k127_346719_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 289.0
LYD2_k127_346719_3 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001356 228.0
LYD2_k127_346719_4 - - - - 0.000000000000000000000000000000000000000000007189 177.0
LYD2_k127_346719_5 PFAM Methyltransferase - - - 0.00000000000000000000000000000000000001461 156.0
LYD2_k127_346719_6 - - - - 0.0000000000000000000000000000004907 135.0
LYD2_k127_346719_7 beta-lactamase activity K07126,K19292 - - 0.000000000000000000000000002331 117.0
LYD2_k127_346719_8 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000008402 114.0
LYD2_k127_346719_9 heat shock protein binding K03686,K05516 - - 0.000000000000005314 79.0
LYD2_k127_3467740_0 von Willebrand factor, type A K07114 - - 3.2e-206 664.0
LYD2_k127_3467740_1 Glycosyl hydrolase family 45 - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 345.0
LYD2_k127_3467740_2 - - - - 0.000000000000001233 90.0
LYD2_k127_3487994_0 Beta-eliminating lyase K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 544.0
LYD2_k127_3487994_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000002508 119.0
LYD2_k127_3487994_2 Glycosyltransferase sugar-binding region containing DXD motif - - - 0.000000000000000000000002068 109.0
LYD2_k127_3487994_3 Glycosyltransferase sugar-binding region containing DXD motif - - - 0.000004978 53.0
LYD2_k127_3491219_0 Uncharacterized conserved protein (DUF2267) - - - 0.0000000000000000000000000000005136 130.0
LYD2_k127_3491219_1 Flavodoxin - - - 0.000000000000000000000000000014 127.0
LYD2_k127_3491219_2 BPTI/Kunitz family of serine protease inhibitors. - - - 0.0000004394 53.0
LYD2_k127_3502824_0 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000000000000002063 198.0
LYD2_k127_3502824_1 Putative exonuclease, RdgC K03554 - - 0.000000000000000000000000000000000000000000000000000003776 198.0
LYD2_k127_3502824_2 May be involved in recombination - - - 0.0000000000000000000000000000000000000117 153.0
LYD2_k127_3502824_3 GMC family oxidoreductase - - - 0.00000000000000000000000009147 123.0
LYD2_k127_3510251_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 606.0
LYD2_k127_3510251_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 533.0
LYD2_k127_3510251_2 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 340.0
LYD2_k127_3510251_3 Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001563 288.0
LYD2_k127_3510251_4 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000006662 248.0
LYD2_k127_3510251_5 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. - - - 0.0000000000000000000000000001059 127.0
LYD2_k127_3510251_6 deoxyhypusine monooxygenase activity - - - 0.0000000000000000003547 99.0
LYD2_k127_3510251_7 zinc-ribbon domain - - - 0.000000000000000002326 95.0
LYD2_k127_3510251_8 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000004144 93.0
LYD2_k127_3517839_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1162.0
LYD2_k127_3517839_1 Cytochrome c-type biogenesis protein K02198 - - 2.265e-292 916.0
LYD2_k127_3517839_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 3.045e-215 677.0
LYD2_k127_3517839_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 471.0
LYD2_k127_3517839_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 368.0
LYD2_k127_3517839_5 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 337.0
LYD2_k127_3517839_7 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000002142 213.0
LYD2_k127_3517839_8 - - - - 0.0000000000000000000000000000003333 134.0
LYD2_k127_3520118_0 Radical SAM - - - 1.468e-194 617.0
LYD2_k127_3520118_1 Lipase maturation factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 588.0
LYD2_k127_3520118_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 501.0
LYD2_k127_3520118_3 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 381.0
LYD2_k127_3520118_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 370.0
LYD2_k127_3520118_5 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 343.0
LYD2_k127_3520118_6 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.0000000000000000000000000000000000000000005051 180.0
LYD2_k127_3520118_7 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000007834 174.0
LYD2_k127_3529376_0 Pyruvate dehydrogenase K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 470.0
LYD2_k127_3529376_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 404.0
LYD2_k127_3529376_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 401.0
LYD2_k127_3529376_3 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 360.0
LYD2_k127_3529376_4 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 310.0
LYD2_k127_3529376_5 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000005571 188.0
LYD2_k127_3529376_6 Phosphopantetheine attachment site - - - 0.0000000000000002721 81.0
LYD2_k127_3535921_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.856e-241 763.0
LYD2_k127_3535921_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 490.0
LYD2_k127_3535921_11 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000006347 68.0
LYD2_k127_3535921_12 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.000000008078 66.0
LYD2_k127_3535921_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0007329 49.0
LYD2_k127_3535921_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 425.0
LYD2_k127_3535921_4 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007083 338.0
LYD2_k127_3535921_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007885 285.0
LYD2_k127_3535921_6 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001755 263.0
LYD2_k127_3535921_7 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000001061 225.0
LYD2_k127_3535921_8 Thiol disulfide interchange protein dsbA - - - 0.000000000000000000000000001565 125.0
LYD2_k127_3535921_9 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000004448 109.0
LYD2_k127_3542911_0 UPF0313 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 480.0
LYD2_k127_3542911_1 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000001015 185.0
LYD2_k127_3542911_2 ribonuclease activity - - - 0.0000000000000000000692 96.0
LYD2_k127_3542911_3 B12 binding domain - - - 0.0000000000000006063 81.0
LYD2_k127_3542911_4 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000002919 64.0
LYD2_k127_3559015_0 Molecular chaperone. Has ATPase activity K04079 - - 9.462e-219 697.0
LYD2_k127_3559015_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 315.0
LYD2_k127_3559015_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000002585 250.0
LYD2_k127_3559015_3 PilT protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000006452 218.0
LYD2_k127_3559015_4 Phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000006816 213.0
LYD2_k127_3559015_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000002034 183.0
LYD2_k127_3559450_0 Cysteine-rich domain K00113 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 587.0
LYD2_k127_3559450_1 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 418.0
LYD2_k127_3559450_2 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000000000000000000000000000000001538 244.0
LYD2_k127_3559450_3 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000001377 184.0
LYD2_k127_3560357_0 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00174 - 1.2.7.11,1.2.7.3 9.327e-244 768.0
LYD2_k127_3560357_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 417.0
LYD2_k127_3560357_2 - - - - 0.00000000000000000000000000000000000000006802 156.0
LYD2_k127_3575444_0 SMART helicase c2 K03722 - 3.6.4.12 1.242e-206 666.0
LYD2_k127_3575444_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004839 250.0
LYD2_k127_3575444_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000001252 221.0
LYD2_k127_3579887_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000004435 67.0
LYD2_k127_3580983_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 1.852e-315 983.0
LYD2_k127_3580983_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 601.0
LYD2_k127_3580983_2 nitrite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 336.0
LYD2_k127_3580983_3 HPP family - - - 0.000000000000000000000000000000000000000000000000000000000000000003539 232.0
LYD2_k127_3580983_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000002778 207.0
LYD2_k127_3580983_5 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000007946 136.0
LYD2_k127_3580983_6 diguanylate cyclase - - - 0.00000000000000000000000000000007057 132.0
LYD2_k127_3603235_0 Type II IV secretion system protein K02283,K03609 - - 3.021e-201 640.0
LYD2_k127_3603235_1 Pilus formation protein N terminal region K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 412.0
LYD2_k127_3603235_2 Type II secretion system (T2SS), protein F K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001171 267.0
LYD2_k127_3603235_3 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000000000000000000000000005161 237.0
LYD2_k127_3603235_4 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000000003423 209.0
LYD2_k127_3610273_0 Beta-ketoacyl synthase, C-terminal domain K00647,K09458 - 2.3.1.179,2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 544.0
LYD2_k127_3610273_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 403.0
LYD2_k127_3610273_10 C2 domain K06399 - 3.4.21.116 0.000000000000000000000000000000000000000000000000000003195 202.0
LYD2_k127_3610273_11 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000002008 190.0
LYD2_k127_3610273_12 - - - - 0.0000000000000000000000000000000000000000000000003489 195.0
LYD2_k127_3610273_13 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000005729 185.0
LYD2_k127_3610273_14 OmpA family - - - 0.00000000000000000000000000000000000000008357 164.0
LYD2_k127_3610273_15 - - - - 0.0000000000000000000000000000000000000002384 150.0
LYD2_k127_3610273_16 Phosphopantetheine attachment site K02078 - - 0.000000000000000000003029 96.0
LYD2_k127_3610273_17 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000203 82.0
LYD2_k127_3610273_18 small periplasmic lipoprotein - - - 0.00000000000001091 85.0
LYD2_k127_3610273_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 410.0
LYD2_k127_3610273_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 418.0
LYD2_k127_3610273_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 346.0
LYD2_k127_3610273_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 325.0
LYD2_k127_3610273_6 Glutamine amidotransferases class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 308.0
LYD2_k127_3610273_7 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 324.0
LYD2_k127_3610273_8 - - - - 0.0000000000000000000000000000000000000000000000000000003025 203.0
LYD2_k127_3610273_9 polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000000001456 198.0
LYD2_k127_3616883_0 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 404.0
LYD2_k127_3616883_1 Transcription elongation factor, GreA/GreB, C-term - - - 0.000000000000000000000000000000000000000000000003527 177.0
LYD2_k127_3616883_2 Aldo/keto reductase family - - - 0.0000000000000000000000009674 106.0
LYD2_k127_3616883_3 lyase activity - - - 0.0000005471 61.0
LYD2_k127_3622424_0 MMPL family K07003 - - 3.414e-196 641.0
LYD2_k127_3622424_1 GtrA-like protein K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 373.0
LYD2_k127_3622424_10 - - - - 0.0000000000000002538 90.0
LYD2_k127_3622424_11 Lysylphosphatidylglycerol synthase TM region - - - 0.0003256 53.0
LYD2_k127_3622424_2 Pfam:Pyridox_oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004729 262.0
LYD2_k127_3622424_3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000006469 246.0
LYD2_k127_3622424_4 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000001474 211.0
LYD2_k127_3622424_5 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000001706 166.0
LYD2_k127_3622424_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000006336 157.0
LYD2_k127_3622424_7 glutathione transferase activity - - - 0.0000000000000000000000000000000004082 136.0
LYD2_k127_3622424_8 ethanolamine kinase activity K07251 - 2.7.1.89 0.00000000000000000000000000000645 131.0
LYD2_k127_3622424_9 Glycosyl transferases group 1 - - - 0.00000000000000000000000003077 126.0
LYD2_k127_3623966_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000141 273.0
LYD2_k127_3623966_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000005574 226.0
LYD2_k127_3623966_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000009266 157.0
LYD2_k127_3624126_0 acyl-CoA dehydrogenase K09456,K20035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001417 253.0
LYD2_k127_3624126_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000006628 228.0
LYD2_k127_3624126_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000001293 70.0
LYD2_k127_3626386_0 Peptidase family M1 domain - - - 0.0000000000000001807 91.0
LYD2_k127_3626386_1 type II secretion system protein E K02283 - - 0.00000002837 57.0
LYD2_k127_3649049_0 Type II IV secretion system protein K02283,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 513.0
LYD2_k127_3649049_1 Pilus formation protein N terminal region K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000001033 240.0
LYD2_k127_3649049_2 Membrane protein involved in cytochrome C biogenesis - - - 0.000000000000000000000000000000000000000000000001073 178.0
LYD2_k127_3649049_3 Zeta toxin - - - 0.00000000000000000000000000000000000000002259 160.0
LYD2_k127_3649049_4 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000001031 145.0
LYD2_k127_3649049_5 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000005462 83.0
LYD2_k127_3649049_6 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000002519 76.0
LYD2_k127_3649049_7 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.0000000001178 68.0
LYD2_k127_3654677_0 sigma factor activity K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 445.0
LYD2_k127_3654677_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000766 158.0
LYD2_k127_3654677_3 YCII-related domain - - - 0.0000000000000000000000000000000001122 143.0
LYD2_k127_3654677_4 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000001872 130.0
LYD2_k127_3654677_5 Stigma-specific protein, Stig1 - - - 0.000000000000000000356 100.0
LYD2_k127_3669727_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1392.0
LYD2_k127_3669727_1 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000001856 281.0
LYD2_k127_3669727_2 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0000000000000000000000000000000000007723 146.0
LYD2_k127_3669727_3 membrane - - - 0.0004135 46.0
LYD2_k127_3676064_0 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000000000003759 209.0
LYD2_k127_3676064_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000081 192.0
LYD2_k127_3676064_3 Dioxygenase - - - 0.00000000000000000000000000000000000000004478 163.0
LYD2_k127_3676064_4 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000002243 121.0
LYD2_k127_3676064_5 stigma-specific Stig1 family protein - GO:0000003,GO:0000302,GO:0001101,GO:0003006,GO:0005575,GO:0005576,GO:0005615,GO:0006950,GO:0006952,GO:0006979,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009751,GO:0009753,GO:0009755,GO:0009791,GO:0009863,GO:0009867,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010154,GO:0010193,GO:0010337,GO:0010565,GO:0010817,GO:0010941,GO:0010942,GO:0014070,GO:0019216,GO:0019217,GO:0019222,GO:0022414,GO:0023052,GO:0031323,GO:0031326,GO:0032350,GO:0032501,GO:0032502,GO:0032870,GO:0035690,GO:0042221,GO:0042304,GO:0042493,GO:0042742,GO:0043207,GO:0044421,GO:0046677,GO:0046885,GO:0046890,GO:0048316,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0070887,GO:0071229,GO:0071236,GO:0071310,GO:0071395,GO:0071407,GO:0071446,GO:0071495,GO:0080090,GO:0080140,GO:0080141,GO:0080142,GO:0098542,GO:1901700,GO:1901701 - 0.00001079 57.0
LYD2_k127_3682735_0 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 434.0
LYD2_k127_3682735_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001666 245.0
LYD2_k127_3682735_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K14189 - - 0.00000000000000000000000000000000000000000000000000000000000000008018 231.0
LYD2_k127_3682735_3 - - - - 0.00000000000000000000000000000000000000000000002814 175.0
LYD2_k127_3707253_1 C-terminal four TMM region of protein-O-mannosyltransferase K00728 - 2.4.1.109 0.0000000000000000001678 102.0
LYD2_k127_3707253_2 Hydrolase Family 16 - - - 0.0000000000000008486 89.0
LYD2_k127_3708648_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 421.0
LYD2_k127_3708648_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000003057 157.0
LYD2_k127_3708648_2 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000008859 135.0
LYD2_k127_3708648_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000005645 112.0
LYD2_k127_3708648_4 Phosphoglycerate mutase - - - 0.0000000000000000017 93.0
LYD2_k127_3712985_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 307.0
LYD2_k127_3712985_1 Macrocin-O-methyltransferase (TylF) K05303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001101 296.0
LYD2_k127_3712985_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000005188 234.0
LYD2_k127_3712985_3 dioxygenase activity - - - 0.0000000000000000000000000000000000000000000008714 175.0
LYD2_k127_3712985_4 polyketide synthase - - - 0.000000000000006333 89.0
LYD2_k127_3712985_5 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000002529 73.0
LYD2_k127_3720158_0 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 518.0
LYD2_k127_3720158_1 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 407.0
LYD2_k127_3720158_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 289.0
LYD2_k127_3720158_3 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006772 258.0
LYD2_k127_3720158_4 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000007015 151.0
LYD2_k127_3720158_5 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000001117 73.0
LYD2_k127_3721452_0 Diguanylate cyclase - - - 2.753e-228 730.0
LYD2_k127_3721452_1 MBOAT, membrane-bound O-acyltransferase family K19294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 571.0
LYD2_k127_3721452_12 Trypsin-like peptidase domain - - - 0.0000000009142 63.0
LYD2_k127_3721452_2 HAMP domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 460.0
LYD2_k127_3721452_3 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000525 261.0
LYD2_k127_3721452_4 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001653 248.0
LYD2_k127_3721452_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000006446 192.0
LYD2_k127_3721452_7 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000001418 111.0
LYD2_k127_3721452_8 FecR protein - - - 0.00000000000000000003198 98.0
LYD2_k127_3722206_0 Histidine kinase K07678,K11527,K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001287 271.0
LYD2_k127_3722206_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000002882 186.0
LYD2_k127_3722206_2 - - - - 0.000000007143 62.0
LYD2_k127_3722206_3 EF hand - - - 0.0000001843 61.0
LYD2_k127_3731905_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 458.0
LYD2_k127_3731905_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 337.0
LYD2_k127_3731905_10 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000002625 98.0
LYD2_k127_3731905_12 ubiE/COQ5 methyltransferase family - - - 0.00000001484 57.0
LYD2_k127_3731905_13 protein kinase activity K12132 - 2.7.11.1 0.000001063 55.0
LYD2_k127_3731905_2 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 305.0
LYD2_k127_3731905_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002106 261.0
LYD2_k127_3731905_4 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000004508 220.0
LYD2_k127_3731905_5 Glycerol acyltransferase - - - 0.00000000000000000000000000000194 130.0
LYD2_k127_3731905_6 Transposase - - - 0.0000000000000000000008176 106.0
LYD2_k127_3731905_7 nuclease activity K06218,K07334 - - 0.000000000000000000002863 96.0
LYD2_k127_3733442_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 374.0
LYD2_k127_3733442_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002711 284.0
LYD2_k127_3733442_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003167 267.0
LYD2_k127_3733442_3 Thioredoxin-like - - - 0.000000000000000000000000000000000000006851 154.0
LYD2_k127_3733442_4 WHG domain - - - 0.0000000000000000000000000000000000000344 154.0
LYD2_k127_3733442_5 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000008946 108.0
LYD2_k127_3733442_6 Histidine kinase - - - 0.000000000000005211 80.0
LYD2_k127_3733442_7 Thioesterase superfamily K02614 - - 0.000000000002294 75.0
LYD2_k127_3733442_8 Two component transcriptional regulator, LuxR family - - - 0.0001147 53.0
LYD2_k127_374384_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 387.0
LYD2_k127_374384_1 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000828 256.0
LYD2_k127_374384_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000001028 213.0
LYD2_k127_374384_3 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000002758 229.0
LYD2_k127_374384_4 PFAM FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000006789 231.0
LYD2_k127_374384_5 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000001153 201.0
LYD2_k127_374384_6 Cytosol aminopeptidase family, N-terminal domain - - - 0.000000000000000000000000000000000000000000000008158 180.0
LYD2_k127_374384_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000001468 183.0
LYD2_k127_374384_8 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000004835 162.0
LYD2_k127_374384_9 - - - - 0.00000000000006631 80.0
LYD2_k127_3748512_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 432.0
LYD2_k127_3748622_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 570.0
LYD2_k127_3748622_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 493.0
LYD2_k127_3748622_2 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 405.0
LYD2_k127_3748622_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000000001817 149.0
LYD2_k127_3748622_4 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000002862 152.0
LYD2_k127_3748622_6 CAAX protease self-immunity K07052 - - 0.0000000003369 72.0
LYD2_k127_3748622_8 PFAM Transposase DDE domain - - - 0.000009181 51.0
LYD2_k127_3750241_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 332.0
LYD2_k127_3750241_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003633 275.0
LYD2_k127_3750241_2 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000005417 148.0
LYD2_k127_3750241_3 SNF2 family N-terminal domain - - - 0.00000006536 62.0
LYD2_k127_3753525_0 protein kinase activity - - - 3.16e-310 990.0
LYD2_k127_3753525_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.795e-235 745.0
LYD2_k127_3753525_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.238e-200 631.0
LYD2_k127_3753525_3 Aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008832 594.0
LYD2_k127_3753525_4 oxidoreductase activity K07114 - - 0.00000000000000000000000000001643 124.0
LYD2_k127_3753525_5 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0000000000000000000000000001754 120.0
LYD2_k127_3753525_6 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000005115 109.0
LYD2_k127_3753525_7 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000001992 60.0
LYD2_k127_3753525_8 oxidoreductase activity K07114 - - 0.00000005668 62.0
LYD2_k127_3758623_0 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 300.0
LYD2_k127_3758623_1 Sigma-70, region 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 291.0
LYD2_k127_3758623_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000003468 246.0
LYD2_k127_3758623_3 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000008156 220.0
LYD2_k127_3758623_4 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000002789 205.0
LYD2_k127_3758623_5 MerR HTH family regulatory protein - - - 0.00000000000000000000000000000000000000000000000000007749 195.0
LYD2_k127_3758623_6 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K20444 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000008692 182.0
LYD2_k127_3758623_7 HDOD domain - - - 0.000000000000000000000000000000000000002665 158.0
LYD2_k127_3758623_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000154 130.0
LYD2_k127_3758623_9 - - - - 0.0000000000000000000005109 99.0
LYD2_k127_3760828_0 FAD dependent oxidoreductase K09516 - 1.3.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 411.0
LYD2_k127_3760828_1 Belongs to the peptidase S16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 306.0
LYD2_k127_3760828_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000001626 226.0
LYD2_k127_3760828_3 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000001698 193.0
LYD2_k127_3760828_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.0000000000000000000000000000000000000000005403 158.0
LYD2_k127_3760828_5 Flavin containing amine oxidoreductase K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000008253 151.0
LYD2_k127_3760828_6 Protein of unknown function (DUF2892) - - - 0.00000000000008366 75.0
LYD2_k127_3760828_7 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000003854 78.0
LYD2_k127_3770117_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 460.0
LYD2_k127_3770117_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 436.0
LYD2_k127_3770117_2 cheY-homologous receiver domain - - - 0.0000000000000000002457 97.0
LYD2_k127_3785822_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 522.0
LYD2_k127_3785822_1 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 507.0
LYD2_k127_3785822_10 PFAM regulatory protein LuxR K07684 - - 0.00000000001139 75.0
LYD2_k127_3785822_2 RESPONSE REGULATOR receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 351.0
LYD2_k127_3785822_3 Receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 347.0
LYD2_k127_3785822_4 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 314.0
LYD2_k127_3785822_5 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432 304.0
LYD2_k127_3785822_6 molybdenum ion binding K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002221 269.0
LYD2_k127_3785822_7 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000004322 115.0
LYD2_k127_3785822_8 PFAM helix-turn-helix- domain containing protein, AraC type K07506 - - 0.00000000000000000000000008507 117.0
LYD2_k127_3785822_9 Belongs to the peptidase S8 family - - - 0.000000000000001745 89.0
LYD2_k127_3794960_0 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 437.0
LYD2_k127_3794960_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 366.0
LYD2_k127_3794960_3 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000001811 221.0
LYD2_k127_3794960_4 Acyltransferase K00655 - 2.3.1.51 0.000000000000001397 88.0
LYD2_k127_3794960_6 Flavin reductase like domain K16048 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006066,GO:0006629,GO:0006694,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009056,GO:0009058,GO:0016042,GO:0016125,GO:0016127,GO:0016491,GO:0016645,GO:0016646,GO:0036094,GO:0042602,GO:0043167,GO:0043168,GO:0044238,GO:0044281,GO:0044282,GO:0046164,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1902652 - 0.000006379 50.0
LYD2_k127_3794960_7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0003324 50.0
LYD2_k127_3810507_0 AI-2E family transporter - - - 0.0000000000000000000000000003038 128.0
LYD2_k127_3817431_0 Voltage gated chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 366.0
LYD2_k127_3817431_1 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009633 247.0
LYD2_k127_3817431_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000007971 207.0
LYD2_k127_3817431_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000001851 191.0
LYD2_k127_3817431_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000003738 157.0
LYD2_k127_3817431_5 aldo keto reductase K05275 - 1.1.1.65 0.000000000003223 74.0
LYD2_k127_3821400_0 PFAM cytochrome P450 K15468 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 460.0
LYD2_k127_3821400_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 302.0
LYD2_k127_3821400_2 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000009208 216.0
LYD2_k127_3821400_3 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000000006297 181.0
LYD2_k127_3821400_4 STAS domain K17763 - - 0.0000000000000000000000000000000000000000001793 167.0
LYD2_k127_3821400_5 Sigma factor PP2C-like phosphatases K05518 - 3.1.3.3 0.0000000000000000000000000000000000000004283 155.0
LYD2_k127_3821400_6 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17762 - - 0.00000000000000000000000000000000000001571 149.0
LYD2_k127_3821400_7 STAS domain K17763 - - 0.00000000000000000000000000000000001191 145.0
LYD2_k127_3821400_8 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000003958 96.0
LYD2_k127_3821400_9 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.000000000005747 72.0
LYD2_k127_3822513_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 370.0
LYD2_k127_3822513_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 365.0
LYD2_k127_3822513_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 368.0
LYD2_k127_3822513_3 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 311.0
LYD2_k127_3822513_4 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 313.0
LYD2_k127_3822513_5 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005548 284.0
LYD2_k127_3822513_6 Glycosyl transferase family 21 K00720 - 2.4.1.80 0.00000000000000000000000000000000000000000000000000000000000000000003054 246.0
LYD2_k127_3822513_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000009101 229.0
LYD2_k127_3822513_8 High confidence in function and specificity - - - 0.0004317 43.0
LYD2_k127_3824292_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 426.0
LYD2_k127_3824292_1 PrkA AAA domain K07180 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 302.0
LYD2_k127_3834914_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 315.0
LYD2_k127_3834914_1 demethylase 8 K10277 GO:0000086,GO:0000278,GO:0003674,GO:0003682,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006464,GO:0006482,GO:0006807,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0008214,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016491,GO:0016569,GO:0016570,GO:0016577,GO:0016705,GO:0016706,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032451,GO:0032452,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051213,GO:0051252,GO:0051254,GO:0051276,GO:0051864,GO:0055114,GO:0060255,GO:0065007,GO:0070013,GO:0070076,GO:0070544,GO:0070988,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:2000112,GO:2001141 1.14.11.27 0.0000000000000000000000003551 119.0
LYD2_k127_3834914_2 Nad-dependent epimerase dehydratase K00091,K01784 - 1.1.1.219,5.1.3.2 0.00000000000000000002444 99.0
LYD2_k127_3834914_3 Cupin-like domain K10277 GO:0000086,GO:0000278,GO:0003674,GO:0003682,GO:0003700,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006464,GO:0006479,GO:0006482,GO:0006807,GO:0006996,GO:0007049,GO:0007623,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008214,GO:0008276,GO:0008757,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010452,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016278,GO:0016279,GO:0016491,GO:0016569,GO:0016570,GO:0016571,GO:0016577,GO:0016705,GO:0016706,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032259,GO:0032451,GO:0032452,GO:0034968,GO:0036211,GO:0042054,GO:0042752,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0045893,GO:0045935,GO:0046975,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051213,GO:0051252,GO:0051254,GO:0051276,GO:0051864,GO:0055114,GO:0060255,GO:0065007,GO:0070013,GO:0070076,GO:0070544,GO:0070988,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:2000112,GO:2001141 1.14.11.27 0.000000002297 63.0
LYD2_k127_3836816_0 beta-1,4-mannooligosaccharide phosphorylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 497.0
LYD2_k127_3836816_1 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 325.0
LYD2_k127_3836816_10 protein trimerization - - - 0.00004651 54.0
LYD2_k127_3836816_2 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000001714 228.0
LYD2_k127_3836816_3 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000000000000000108 157.0
LYD2_k127_3836816_4 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000746 121.0
LYD2_k127_3836816_5 lipolytic protein G-D-S-L family - - - 0.000000000000000000000006258 115.0
LYD2_k127_3836816_7 - - - - 0.00000001523 64.0
LYD2_k127_3836816_9 Calcium ion binding - GO:0002009,GO:0002165,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0007275,GO:0007424,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0007591,GO:0008150,GO:0008362,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0022404,GO:0031012,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040003,GO:0040005,GO:0042303,GO:0042335,GO:0044421,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0060429,GO:0060541,GO:0060562,GO:0065007,GO:0065008,GO:0090066 - 0.000009228 58.0
LYD2_k127_3842934_0 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 348.0
LYD2_k127_3842934_1 Bacterial periplasmic substrate-binding proteins K01713 - 4.2.1.51,4.2.1.91 0.00000000000000000000000000000000000000000000000000000008039 212.0
LYD2_k127_3842934_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000001432 210.0
LYD2_k127_3849263_0 domain, Protein K01179 - 3.2.1.4 0.0000000000009004 81.0
LYD2_k127_3849263_1 Glycosyl hydrolase family 48 - - - 0.000002235 61.0
LYD2_k127_3850350_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 438.0
LYD2_k127_3850350_1 Protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 424.0
LYD2_k127_3850350_2 pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 361.0
LYD2_k127_3850350_3 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000002288 236.0
LYD2_k127_3850350_4 R3H domain K06346 - - 0.00000000000000000000000000000000000000000000000000000000004391 215.0
LYD2_k127_3850350_5 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000006175 213.0
LYD2_k127_3850350_6 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.0000000000000000000000000000000000000000000000000000002026 200.0
LYD2_k127_3850350_7 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000006523 122.0
LYD2_k127_3850350_8 Divergent 4Fe-4S mono-cluster K05337 - - 0.000000000000000000003779 95.0
LYD2_k127_3850350_9 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000001125 91.0
LYD2_k127_3858770_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 593.0
LYD2_k127_3858770_1 tRNA synthetases class I (W and Y) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 413.0
LYD2_k127_3858770_2 Family membership K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 366.0
LYD2_k127_3858770_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 349.0
LYD2_k127_3858770_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000007513 244.0
LYD2_k127_3858770_5 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000000000000007558 152.0
LYD2_k127_3858770_6 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000002109 156.0
LYD2_k127_3858770_7 Worm-specific repeat type 1 - - - 0.0000001195 60.0
LYD2_k127_3858770_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0008364 52.0
LYD2_k127_3860309_0 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 311.0
LYD2_k127_3860309_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 273.0
LYD2_k127_3860309_2 HD domain - - - 0.0000000000000000000000006629 119.0
LYD2_k127_3860309_4 histone H2A K63-linked ubiquitination - - - 0.0000000000004822 74.0
LYD2_k127_3863966_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 575.0
LYD2_k127_3864034_0 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 303.0
LYD2_k127_3864034_1 negative regulation of protein lipidation K19294 - - 0.00000000007023 74.0
LYD2_k127_3865692_0 arylsulfatase activity K07014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 310.0
LYD2_k127_3865692_1 Di-haem cytochrome c peroxidase - - - 0.00000000000000000000000000000000007227 152.0
LYD2_k127_3865692_2 cellulase activity - - - 0.000000000000000000002494 110.0
LYD2_k127_3865692_3 protein trimerization - - - 0.0000000000000000002261 101.0
LYD2_k127_3865692_4 glucose sorbosone - - - 0.00000000003344 77.0
LYD2_k127_3866480_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 373.0
LYD2_k127_3866480_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000005761 162.0
LYD2_k127_3866480_2 PQQ enzyme repeat K00117 - 1.1.5.2 0.0000008634 55.0
LYD2_k127_3866480_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000006884 49.0
LYD2_k127_3874458_0 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 556.0
LYD2_k127_3874458_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 443.0
LYD2_k127_3874458_3 - - - - 0.000000000000000000000000000000000000000001224 162.0
LYD2_k127_3880982_0 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 483.0
LYD2_k127_3880982_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000001302 89.0
LYD2_k127_3882401_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.435e-249 790.0
LYD2_k127_3882401_1 GMC oxidoreductase K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 535.0
LYD2_k127_3882401_10 CHAD - - - 0.00000000000001883 84.0
LYD2_k127_3882401_11 PFAM S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000002462 52.0
LYD2_k127_3882401_12 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000002489 58.0
LYD2_k127_3882401_2 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 527.0
LYD2_k127_3882401_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 507.0
LYD2_k127_3882401_4 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 349.0
LYD2_k127_3882401_5 PaaX-like protein C-terminal domain K02616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001796 285.0
LYD2_k127_3882401_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000005085 145.0
LYD2_k127_3882401_7 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000002686 134.0
LYD2_k127_3882401_8 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000005687 133.0
LYD2_k127_3882401_9 Polymer-forming cytoskeletal - - - 0.00000000000000000000000002086 123.0
LYD2_k127_38844_0 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 439.0
LYD2_k127_38844_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 364.0
LYD2_k127_38844_2 HMGL-like K01640 - 4.1.3.4 0.00000000000000000000000000000000008038 142.0
LYD2_k127_38844_3 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000002546 104.0
LYD2_k127_3885003_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 5.305e-291 902.0
LYD2_k127_3885003_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 503.0
LYD2_k127_3885003_10 - - - - 0.00000000000000001866 93.0
LYD2_k127_3885003_2 protein containing a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 447.0
LYD2_k127_3885003_3 maleylacetate reductase K00217 - 1.3.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 334.0
LYD2_k127_3885003_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 319.0
LYD2_k127_3885003_5 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001405 259.0
LYD2_k127_3885003_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003611 252.0
LYD2_k127_3885003_7 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000524 219.0
LYD2_k127_3885003_8 acyl-CoA hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000379 204.0
LYD2_k127_3885003_9 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000002833 144.0
LYD2_k127_3887712_0 Belongs to the peptidase C1 family - - - 0.0000136 56.0
LYD2_k127_3887712_1 PFAM Pentapeptide repeats (8 copies) - - - 0.0009642 46.0
LYD2_k127_390230_0 Thioredoxin - - - 2.203e-235 748.0
LYD2_k127_390230_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002615 281.0
LYD2_k127_390230_2 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007795 276.0
LYD2_k127_390230_3 PilZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002228 246.0
LYD2_k127_3913343_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 542.0
LYD2_k127_3913343_1 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 304.0
LYD2_k127_3913343_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000003397 258.0
LYD2_k127_3913343_3 lipid A biosynthetic process K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000004775 212.0
LYD2_k127_3913343_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000003786 166.0
LYD2_k127_3913343_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000006101 155.0
LYD2_k127_3913343_6 - - - - 0.0000000000000000003013 91.0
LYD2_k127_3921874_0 PFAM AMP-dependent synthetase and ligase - - - 4.793e-218 690.0
LYD2_k127_3921874_1 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 460.0
LYD2_k127_3921874_2 Conserved region in glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 377.0
LYD2_k127_3921874_3 phosphoglycolate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 308.0
LYD2_k127_3921874_5 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000006185 143.0
LYD2_k127_3921914_0 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 446.0
LYD2_k127_3921914_1 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000002978 173.0
LYD2_k127_3921914_2 Serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000001052 92.0
LYD2_k127_3938745_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 485.0
LYD2_k127_3938745_1 Succinyl-CoA ligase like flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 461.0
LYD2_k127_3938745_2 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 302.0
LYD2_k127_3938745_3 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000006732 61.0
LYD2_k127_3941878_0 Di-haem cytochrome c peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 376.0
LYD2_k127_3941878_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 330.0
LYD2_k127_3941878_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000002991 233.0
LYD2_k127_3941878_3 Pectinacetylesterase - - - 0.00000000000000000000000000000000000000000000000001672 202.0
LYD2_k127_3941878_4 phospholipase C - - - 0.00000000000000000000000000000000000000000000000005215 192.0
LYD2_k127_3941878_5 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000002166 124.0
LYD2_k127_3941878_6 Protein of unknown function (DUF1552) - - - 0.000000000000000001459 100.0
LYD2_k127_3941878_7 Protein of unknown function (DUF1592) - - - 0.0000000000000002534 87.0
LYD2_k127_3943840_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 299.0
LYD2_k127_3943840_1 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000006625 215.0
LYD2_k127_3945204_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 503.0
LYD2_k127_3945204_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 389.0
LYD2_k127_3945204_2 peptidase inhibitor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 320.0
LYD2_k127_3945204_4 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000006617 155.0
LYD2_k127_3947617_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 346.0
LYD2_k127_3947617_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 335.0
LYD2_k127_3947617_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000726 170.0
LYD2_k127_3948461_0 Protein phosphatase 2A homologues, catalytic domain. - - - 0.0000000000000000000000000000000004388 135.0
LYD2_k127_3948461_1 protein kinase activity - - - 0.00000000000000000000000000000002521 146.0
LYD2_k127_3951813_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 570.0
LYD2_k127_3951813_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 291.0
LYD2_k127_3951813_2 DNA-templated transcription, termination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002047 276.0
LYD2_k127_3951813_3 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000007174 158.0
LYD2_k127_3953452_0 Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 460.0
LYD2_k127_3953452_1 acid phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000238 218.0
LYD2_k127_3953452_2 DNA-binding transcription factor activity - - - 0.00000000000000000000000004121 113.0
LYD2_k127_3954590_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 1.267e-203 663.0
LYD2_k127_3954590_1 Formyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001002 288.0
LYD2_k127_3954590_3 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000001187 189.0
LYD2_k127_3954590_5 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like - - - 0.0002602 51.0
LYD2_k127_3955697_0 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000003841 216.0
LYD2_k127_3955697_1 Helix-turn-helix domain - - - 0.00000000000000003708 91.0
LYD2_k127_3955697_2 endonuclease activity K07451 - - 0.0000000000000001834 93.0
LYD2_k127_3957179_0 Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 422.0
LYD2_k127_3957179_1 Archaea bacterial proteins of unknown function K06921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 416.0
LYD2_k127_3957179_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009267 270.0
LYD2_k127_3957179_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000005425 219.0
LYD2_k127_3957179_5 carbon-nitrogen ligase activity, with glutamine as amido-N-donor K09117 - - 0.00000000000000002028 88.0
LYD2_k127_3957179_6 Histidine kinase - - - 0.0000000000000001445 87.0
LYD2_k127_3959407_0 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001001 288.0
LYD2_k127_3959407_1 Superfamily II DNA RNA helicases, SNF2 family - - - 0.000000000000000000000000749 110.0
LYD2_k127_3959407_2 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0001779 54.0
LYD2_k127_3964177_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 560.0
LYD2_k127_3964177_1 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 449.0
LYD2_k127_3964177_2 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002382 254.0
LYD2_k127_3964177_3 - - - - 0.0000000000000000000000000000000000000000008489 181.0
LYD2_k127_3964177_4 PEGA domain - - - 0.0000000000000000000002637 103.0
LYD2_k127_3965182_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 433.0
LYD2_k127_3965182_1 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004246 264.0
LYD2_k127_3965182_2 Belongs to the peptidase S8 family - - - 0.0000000000000000000002992 109.0
LYD2_k127_3965182_3 Pkd domain containing protein - - - 0.00000000000892 73.0
LYD2_k127_3965182_5 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.0001598 51.0
LYD2_k127_3975638_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 428.0
LYD2_k127_3975701_0 Acyl-protein synthetase, LuxE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003777 290.0
LYD2_k127_3975701_1 belongs to the aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000005385 209.0
LYD2_k127_3975701_2 Acyltransferase family - - - 0.0000000000000000002814 101.0
LYD2_k127_3978924_0 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 439.0
LYD2_k127_3978924_1 Pfam:Methyltransf_26 - - - 0.00000000000000000000000000000000000000000000000000000000000000008029 231.0
LYD2_k127_3978924_2 beta-lactamase activity K07126 - - 0.00000000000000000000000000408 125.0
LYD2_k127_3978924_3 PEGA domain - - - 0.00000000007154 69.0
LYD2_k127_3982694_0 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 313.0
LYD2_k127_3982694_1 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
LYD2_k127_3982694_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000005488 244.0
LYD2_k127_3982694_3 Protein of unknown function (DUF938) - - - 0.00000000000000002467 84.0
LYD2_k127_3984380_0 repeat protein - - - 0.0 1650.0
LYD2_k127_3984380_1 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 507.0
LYD2_k127_3984380_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.000000000000006549 82.0
LYD2_k127_3984380_2 Type IV pilus assembly protein PilM; K02461 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 390.0
LYD2_k127_3984380_3 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 384.0
LYD2_k127_3984380_4 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01847,K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 333.0
LYD2_k127_3984380_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003359 269.0
LYD2_k127_3984380_6 Type II secretion system (T2SS), protein J K02459 - - 0.000000000000000000000000000000000000000000000000000000000003681 226.0
LYD2_k127_3984380_8 Prokaryotic N-terminal methylation motif K02458 - - 0.000000000000000000000000000000000002988 149.0
LYD2_k127_3988022_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 6.187e-247 796.0
LYD2_k127_3988022_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 445.0
LYD2_k127_3988022_2 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 353.0
LYD2_k127_3988022_3 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006257 275.0
LYD2_k127_3988022_4 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000003889 226.0
LYD2_k127_3988022_5 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000001098 199.0
LYD2_k127_3988022_6 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000006099 114.0
LYD2_k127_3991754_0 Superfamily II DNA RNA helicases, SNF2 family - - - 1.683e-212 667.0
LYD2_k127_3991754_10 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000001628 157.0
LYD2_k127_3991754_11 Protein conserved in bacteria K09922 - - 0.000000000000000000000000000000000001648 141.0
LYD2_k127_3991754_12 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000004069 130.0
LYD2_k127_3991754_13 - - - - 0.00000000000000000000000000004949 130.0
LYD2_k127_3991754_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 310.0
LYD2_k127_3991754_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 301.0
LYD2_k127_3991754_4 HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005833 248.0
LYD2_k127_3991754_5 Two component transcriptional regulator, winged helix family K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000009997 229.0
LYD2_k127_3991754_6 glutathione transferase activity K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000002633 231.0
LYD2_k127_3991754_7 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000001118 197.0
LYD2_k127_3991754_9 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000000000000001321 157.0
LYD2_k127_3998953_0 Bacterial regulatory protein, Fis family K11384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 398.0
LYD2_k127_3998953_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 302.0
LYD2_k127_3998953_2 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000002076 96.0
LYD2_k127_3998953_3 methyltransferase - - - 0.00006355 52.0
LYD2_k127_4003186_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 396.0
LYD2_k127_4003186_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 373.0
LYD2_k127_4003186_10 PilZ domain - - - 0.00000000000000308 79.0
LYD2_k127_4003186_11 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000003607 74.0
LYD2_k127_4003186_13 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.0004679 46.0
LYD2_k127_4003186_2 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 362.0
LYD2_k127_4003186_3 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000000000000000003171 218.0
LYD2_k127_4003186_4 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000000000000000003422 183.0
LYD2_k127_4003186_5 - - - - 0.0000000000000000000000000000000000000000000135 167.0
LYD2_k127_4003186_6 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000002782 152.0
LYD2_k127_4003760_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1017.0
LYD2_k127_4003760_1 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000002875 138.0
LYD2_k127_4003760_2 cellulose binding - - - 0.000000000002893 75.0
LYD2_k127_4003760_3 PHAX RNA-binding domain K14291 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006351,GO:0006366,GO:0006403,GO:0006405,GO:0006408,GO:0006725,GO:0006807,GO:0006810,GO:0006913,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009301,GO:0009987,GO:0010467,GO:0015630,GO:0015643,GO:0015931,GO:0016070,GO:0016073,GO:0018130,GO:0019438,GO:0031974,GO:0031981,GO:0032774,GO:0033036,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036477,GO:0042795,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051030,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0097064,GO:0097159,GO:0097458,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0000001074 63.0
LYD2_k127_4003760_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000003151 52.0
LYD2_k127_4003760_5 - - - - 0.00004165 46.0
LYD2_k127_4007116_0 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 344.0
LYD2_k127_4007116_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002956 291.0
LYD2_k127_4007116_2 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000002124 229.0
LYD2_k127_4007116_3 - - - - 0.00000000000000004569 90.0
LYD2_k127_4007116_4 PEGA domain - - - 0.0000000001117 73.0
LYD2_k127_4008788_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 379.0
LYD2_k127_4008788_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000008492 191.0
LYD2_k127_4008788_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000003258 124.0
LYD2_k127_4008788_3 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000003328 97.0
LYD2_k127_4008788_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000006438 92.0
LYD2_k127_4008788_5 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000009379 75.0
LYD2_k127_4008788_6 Cysteine-rich CPXCG - - - 0.0000000002154 70.0
LYD2_k127_4008788_7 KAP family P-loop domain - - - 0.00000002264 66.0
LYD2_k127_4009280_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000001654 139.0
LYD2_k127_4009280_1 FAD binding domain - - - 0.0000000000000000000605 94.0
LYD2_k127_4009280_2 response regulator, receiver - - - 0.0000005311 61.0
LYD2_k127_4009280_3 Pyridoxamine 5'-phosphate oxidase - - - 0.0004867 48.0
LYD2_k127_4013872_0 Catalase K03781 - 1.11.1.6 5.632e-303 943.0
LYD2_k127_4013872_1 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 3.194e-209 658.0
LYD2_k127_4013872_10 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000000005811 97.0
LYD2_k127_4013872_11 MacB-like periplasmic core domain K02004 - - 0.00000000007885 74.0
LYD2_k127_4013872_12 - - - - 0.0003502 49.0
LYD2_k127_4013872_2 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 478.0
LYD2_k127_4013872_3 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001517 288.0
LYD2_k127_4013872_4 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005693 261.0
LYD2_k127_4013872_5 COG2706 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000003969 199.0
LYD2_k127_4013872_6 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.000000000000000000000000000000000000000000000001009 180.0
LYD2_k127_4013872_7 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.000000000000000000000000000000000000000001889 164.0
LYD2_k127_4013872_8 Small integral membrane protein - - - 0.000000000000000000000000000000000001477 149.0
LYD2_k127_4013872_9 AraC family transcriptional regulator - - - 0.0000000000000000000000000000000001576 145.0
LYD2_k127_4018115_0 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000001301 250.0
LYD2_k127_4018115_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000002289 196.0
LYD2_k127_4018115_2 PEGA domain - - - 0.0000000000000000003929 102.0
LYD2_k127_4022808_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 511.0
LYD2_k127_4022808_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000003114 228.0
LYD2_k127_4022808_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000002966 64.0
LYD2_k127_4028174_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 610.0
LYD2_k127_4028174_1 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 391.0
LYD2_k127_4028174_2 - - - - 0.00000000000000000005308 99.0
LYD2_k127_4047592_0 PFAM 2-nitropropane dioxygenase NPD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 452.0
LYD2_k127_4047592_1 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 294.0
LYD2_k127_4047592_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000002704 215.0
LYD2_k127_4047592_3 Enoyl-CoA hydratase K01692,K18383 - 4.1.2.41,4.2.1.101,4.2.1.17 0.0000000000000000000000000000000000000000000000001367 178.0
LYD2_k127_4047592_4 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0005673 46.0
LYD2_k127_4047606_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 387.0
LYD2_k127_4047606_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 334.0
LYD2_k127_4047606_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000001155 203.0
LYD2_k127_4047606_3 response regulator receiver K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000001584 179.0
LYD2_k127_4047606_4 Histidine kinase K07711 - 2.7.13.3 0.0000000000000004256 80.0
LYD2_k127_4056275_0 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 339.0
LYD2_k127_4056275_1 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003242 262.0
LYD2_k127_4056275_2 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000002991 237.0
LYD2_k127_4056275_3 Transcriptional regulator, AbiEi antitoxin - - - 0.00000000000000000000000000000000000449 143.0
LYD2_k127_4056275_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000001094 135.0
LYD2_k127_4056275_5 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000002315 138.0
LYD2_k127_4056275_6 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000001354 126.0
LYD2_k127_4056275_7 - - - - 0.0000000000006692 79.0
LYD2_k127_4056275_8 domain, Protein - - - 0.00003527 55.0
LYD2_k127_406142_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 7.143e-290 902.0
LYD2_k127_406142_1 Flavin-binding monooxygenase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 578.0
LYD2_k127_406142_2 tRNA nucleotidyltransferase domain 2 putative K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 289.0
LYD2_k127_406142_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000007091 147.0
LYD2_k127_406142_4 transcriptional regulator - - - 0.00000000000000000000000000000003674 135.0
LYD2_k127_406142_5 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000006852 99.0
LYD2_k127_4064396_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 535.0
LYD2_k127_4064396_1 PFAM cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 439.0
LYD2_k127_4064396_2 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000001639 227.0
LYD2_k127_4064396_3 FR47-like protein K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000007206 183.0
LYD2_k127_4064396_4 Protein of unknown function (DUF952) K00799 - 2.5.1.18 0.000000000000000000000000002125 115.0
LYD2_k127_4064396_5 PFAM glycoside hydrolase family 39 - - - 0.0000008733 61.0
LYD2_k127_4065979_0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 309.0
LYD2_k127_4065979_1 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000204 175.0
LYD2_k127_4065979_2 EAL domain - - - 0.00000000000000000000000000000000471 139.0
LYD2_k127_4065979_3 Long-chain-alcohol oxidase - - - 0.00000000004536 63.0
LYD2_k127_4072789_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 2.132e-238 760.0
LYD2_k127_4072789_1 Cytochrome b subunit of the bc complex K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 577.0
LYD2_k127_4072789_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 452.0
LYD2_k127_4072789_3 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 388.0
LYD2_k127_4072789_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005217 257.0
LYD2_k127_4072789_5 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.00000000000000000000000000000000000000000000001034 179.0
LYD2_k127_4072789_6 Bifunctional nuclease K08999 - - 0.0000000000000002185 91.0
LYD2_k127_4072789_7 - - - - 0.0000000000000004942 85.0
LYD2_k127_4072789_8 zinc-ribbon domain - - - 0.0000002173 63.0
LYD2_k127_4072789_9 FecR protein - - - 0.0000004941 63.0
LYD2_k127_4081892_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 432.0
LYD2_k127_4081892_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 332.0
LYD2_k127_4081892_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000147 259.0
LYD2_k127_4081892_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000005562 200.0
LYD2_k127_4081892_4 PAS sensor protein K13243 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0008081,GO:0008144,GO:0008150,GO:0009628,GO:0016787,GO:0016788,GO:0019825,GO:0019826,GO:0020037,GO:0036094,GO:0042578,GO:0043167,GO:0043169,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0070482,GO:0071111,GO:0097159,GO:1901363 3.1.4.52 0.000000000000000000000000000000000000000000131 167.0
LYD2_k127_4081892_5 - - - - 0.00000000000000001865 85.0
LYD2_k127_4081892_6 chemotaxis, protein K03406 - - 0.00001129 53.0
LYD2_k127_4089534_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 466.0
LYD2_k127_4089534_1 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000001789 166.0
LYD2_k127_4102627_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 523.0
LYD2_k127_4102627_1 Hydrolases of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 285.0
LYD2_k127_4102627_2 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001312 276.0
LYD2_k127_4102627_3 Divergent 4Fe-4S mono-cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005516 271.0
LYD2_k127_4107945_0 Aminotransferase class-III K03918,K07250,K20428 - 2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 455.0
LYD2_k127_4107945_1 AAA ATPase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000005702 207.0
LYD2_k127_4107945_2 Surface antigen - - - 0.00000000000000000000000000000000000000000000000004762 194.0
LYD2_k127_4107945_3 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000000004598 180.0
LYD2_k127_4107945_4 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000009086 167.0
LYD2_k127_4122498_0 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000001575 153.0
LYD2_k127_4122498_1 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000003393 137.0
LYD2_k127_4122498_2 Protein of unknown function (DUF2939) - - - 0.000000000000000000000000009474 123.0
LYD2_k127_4122498_3 Tetratricopeptide repeat - - - 0.000000000000000000001512 110.0
LYD2_k127_4122498_4 Periplasmic Protein - - - 0.00000000000000005835 88.0
LYD2_k127_4122498_5 Protein of unknown function (DUF1559) - - - 0.0000001417 61.0
LYD2_k127_4139691_0 Glutamine synthetase type III K01915 - 6.3.1.2 2.373e-252 788.0
LYD2_k127_4139691_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 392.0
LYD2_k127_414147_0 Carboxyl transferase domain - - - 3.558e-210 658.0
LYD2_k127_414147_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 482.0
LYD2_k127_4144671_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 8.058e-217 695.0
LYD2_k127_4144671_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007026 262.0
LYD2_k127_4144671_2 - - - - 0.0000000000000001154 86.0
LYD2_k127_4144671_3 iron ion homeostasis K04758 - - 0.000000000000001437 79.0
LYD2_k127_4145985_0 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 479.0
LYD2_k127_4145985_1 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 288.0
LYD2_k127_4145985_2 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000000000000000000000000000002661 174.0
LYD2_k127_4145985_4 regulation of canonical Wnt signaling pathway involved in osteoblast differentiation K01691 - - 0.000004808 58.0
LYD2_k127_4146936_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 475.0
LYD2_k127_4146936_1 Pectinacetylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005881 265.0
LYD2_k127_4146936_2 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000003542 230.0
LYD2_k127_4146936_3 Pkd domain containing protein - - - 0.0000000000002738 84.0
LYD2_k127_4146936_4 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000003331 71.0
LYD2_k127_4154633_0 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 462.0
LYD2_k127_4154633_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 413.0
LYD2_k127_4169533_0 deoxyhypusine monooxygenase activity - - - 3.269e-242 777.0
LYD2_k127_4169533_1 phospholipase C K01114 - 3.1.4.3 0.00000000000000000000000000000000000000000000000000000000000000000003336 252.0
LYD2_k127_4169533_10 CAAX protease self-immunity K07052 - - 0.000051 49.0
LYD2_k127_4169533_2 - - - - 0.00000000000000000000000000000000000000000005316 176.0
LYD2_k127_4169533_3 iron ion homeostasis - - - 0.00000000000000000000000000000000000000000009572 179.0
LYD2_k127_4169533_4 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.00000000000000000000000000000000000000003841 153.0
LYD2_k127_4169533_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000001857 63.0
LYD2_k127_4169533_9 PIN domain - - - 0.00000005405 59.0
LYD2_k127_417367_0 Pectinacetylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000004341 221.0
LYD2_k127_417367_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000153 228.0
LYD2_k127_417367_3 His Kinase A (phosphoacceptor) domain - - - 0.0005536 46.0
LYD2_k127_4213116_0 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 2.291e-196 636.0
LYD2_k127_4213116_1 Cys Met metabolism K01739,K01758,K01760,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 501.0
LYD2_k127_4213116_2 PGAP1-like protein K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000004144 209.0
LYD2_k127_4213116_4 - - - - 0.000000000000868 80.0
LYD2_k127_4213116_5 KR domain - - - 0.00000000007233 63.0
LYD2_k127_4218061_0 response regulator K07713 - - 4.779e-228 714.0
LYD2_k127_4218061_1 General secretion pathway protein C K02452 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007122 271.0
LYD2_k127_4218061_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000008061 157.0
LYD2_k127_4221840_0 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002307 269.0
LYD2_k127_4221840_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000001169 201.0
LYD2_k127_4234992_0 PrkA serine protein kinase C-terminal domain - - - 1.034e-279 881.0
LYD2_k127_4234992_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 419.0
LYD2_k127_4234992_2 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 293.0
LYD2_k127_4234992_3 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006495 289.0
LYD2_k127_4234992_4 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000000000000000002101 182.0
LYD2_k127_4238336_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0003674,GO:0003824,GO:0004794,GO:0005488,GO:0006082,GO:0006520,GO:0006549,GO:0006566,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009081,GO:0009082,GO:0009097,GO:0009987,GO:0016053,GO:0016597,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0019842,GO:0030170,GO:0031406,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 552.0
LYD2_k127_4238336_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 367.0
LYD2_k127_4238336_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000001016 214.0
LYD2_k127_4238336_3 Ribonuclease E/G family K08301 - - 0.000000000000000000000000000000000002608 144.0
LYD2_k127_424340_0 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 378.0
LYD2_k127_424340_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 328.0
LYD2_k127_424340_2 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 316.0
LYD2_k127_424340_3 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 297.0
LYD2_k127_424340_4 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000021 236.0
LYD2_k127_424340_5 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000000000000000000001378 239.0
LYD2_k127_424340_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000001889 189.0
LYD2_k127_424340_8 GDSL-like Lipase/Acylhydrolase - - - 0.00000007413 63.0
LYD2_k127_4244599_0 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 344.0
LYD2_k127_4244599_1 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000003739 209.0
LYD2_k127_4244599_2 amine dehydrogenase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000002204 204.0
LYD2_k127_4247215_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000002034 169.0
LYD2_k127_4247215_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000004938 152.0
LYD2_k127_4247215_2 sequence-specific DNA binding K02099,K13529,K15051 - 3.2.2.21 0.00000000000000000000000000000001034 133.0
LYD2_k127_4252765_0 DNA mismatch repair protein K07456 - - 1.991e-204 648.0
LYD2_k127_4252765_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000988 174.0
LYD2_k127_4252765_3 - - - - 0.00004244 54.0
LYD2_k127_4256237_0 Serine Threonine protein kinase K12132 - 2.7.11.1 7.322e-233 738.0
LYD2_k127_4265416_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 474.0
LYD2_k127_4265416_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 470.0
LYD2_k127_4265416_2 N-terminal domain of oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 431.0
LYD2_k127_4265416_3 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009806 263.0
LYD2_k127_4265416_4 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000000000000000000006264 234.0
LYD2_k127_4265416_5 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000008542 174.0
LYD2_k127_4265416_6 Transcriptional Regulator, AraC family - - - 0.000000000000000000000000000000000000000000004178 176.0
LYD2_k127_4265416_7 phosphoprotein phosphatase activity - - - 0.000000000001609 71.0
LYD2_k127_4265416_8 Bacterial regulatory proteins, tetR family - - - 0.000000000181 72.0
LYD2_k127_4265416_9 - - - - 0.00000005927 61.0
LYD2_k127_4274694_0 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002258 274.0
LYD2_k127_4274694_1 Family membership K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000004426 255.0
LYD2_k127_4274694_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000002357 158.0
LYD2_k127_4286239_0 Pectinacetylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004334 246.0
LYD2_k127_4286239_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000006047 166.0
LYD2_k127_4286239_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000007156 154.0
LYD2_k127_4286239_3 Hemerythrin HHE cation binding domain - - - 0.0000000000004664 78.0
LYD2_k127_4290925_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 489.0
LYD2_k127_4290925_1 Domain of unknown function (DUF697) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 433.0
LYD2_k127_4298211_0 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 369.0
LYD2_k127_4298211_1 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000005713 252.0
LYD2_k127_4298211_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002496 232.0
LYD2_k127_4298211_3 Protein of unknown function (DUF3089) - - - 0.00000000001014 72.0
LYD2_k127_4298211_4 CotH kinase protein - - - 0.000008596 49.0
LYD2_k127_4299460_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 366.0
LYD2_k127_4299460_1 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000216 228.0
LYD2_k127_4299460_2 Histidine kinase K07711,K19694 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000006503 220.0
LYD2_k127_4299460_3 protein heterodimerization activity - - - 0.000000000000000000000000000000000001425 149.0
LYD2_k127_4310826_0 synthase K01858 - 5.5.1.4 2.39e-230 719.0
LYD2_k127_4310826_1 Putative glutamine amidotransferase - - - 7.687e-200 652.0
LYD2_k127_4310826_2 PBS lyase HEAT-like repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 536.0
LYD2_k127_4310826_3 MobA-like NTP transferase domain K07281 - 2.7.7.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 333.0
LYD2_k127_4310826_4 N-terminal double-transmembrane domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001021 265.0
LYD2_k127_4310826_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000001398 217.0
LYD2_k127_4310826_6 Nucleotidyl transferase - - - 0.000000000000000000000000000000000002578 149.0
LYD2_k127_4310826_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000004072 110.0
LYD2_k127_43111_1 NIPSNAP - - - 0.000000000000000000000000000000000000000000000000000777 185.0
LYD2_k127_43111_2 acetyltransferase K18815 - 2.3.1.82 0.00000000000000000000000001611 114.0
LYD2_k127_43111_3 - - - - 0.00000000000000000000001183 117.0
LYD2_k127_43111_5 PFAM plasmid - - - 0.00000293 53.0
LYD2_k127_43111_6 Putative addiction module component - - - 0.00002133 50.0
LYD2_k127_4311996_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 561.0
LYD2_k127_4311996_1 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 448.0
LYD2_k127_4311996_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 366.0
LYD2_k127_4311996_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 330.0
LYD2_k127_4311996_4 Aldehyde dehydrogenase family K00129 - 1.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000006643 226.0
LYD2_k127_4311996_5 HEAT repeat - - - 0.0000000000000000000000000000000000000000000000000000003184 217.0
LYD2_k127_4311996_6 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000002762 163.0
LYD2_k127_4311996_7 Chemotaxis protein CheY K03413 - - 0.0000000000000000000000000000000000008119 143.0
LYD2_k127_4311996_8 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000001177 144.0
LYD2_k127_4311996_9 thiolester hydrolase activity K06889 - - 0.000000009561 66.0
LYD2_k127_4314832_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 486.0
LYD2_k127_4314832_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 454.0
LYD2_k127_4314832_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 359.0
LYD2_k127_4314832_3 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000001332 160.0
LYD2_k127_4314832_4 peptidyl-prolyl cis-trans isomerase activity K00645,K02597,K03769,K03771 - 2.3.1.39,5.2.1.8 0.000000000000000000000000000145 127.0
LYD2_k127_4314832_7 von Willebrand factor (vWF) type A domain - - - 0.000000003682 67.0
LYD2_k127_4323192_0 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 334.0
LYD2_k127_4323192_1 ATPase activity - - - 0.000000000000000000000000000000000005916 156.0
LYD2_k127_4323192_2 CBD_II - - - 0.00000000000000002097 93.0
LYD2_k127_4323192_3 - - - - 0.0000000000000001288 90.0
LYD2_k127_4331210_0 Beta-L-arabinofuranosidase, GH127 - - - 0.000000000000000000000000000000000000001247 161.0
LYD2_k127_4331210_1 - - - - 0.000000000000000000000000000003555 124.0
LYD2_k127_4331210_2 Protein of unknown function (DUF1249) - - - 0.000000000000001032 88.0
LYD2_k127_4331210_3 - - - - 0.0000117 50.0
LYD2_k127_4331210_4 cellulose binding - - - 0.0002776 49.0
LYD2_k127_4331389_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.319e-281 873.0
LYD2_k127_4331389_1 drug transmembrane transporter activity K03327 - - 1.625e-198 629.0
LYD2_k127_4331389_11 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000001029 79.0
LYD2_k127_4331389_12 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000004313 68.0
LYD2_k127_4331389_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 601.0
LYD2_k127_4331389_3 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 395.0
LYD2_k127_4331389_4 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 312.0
LYD2_k127_4331389_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 305.0
LYD2_k127_4331389_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000224 248.0
LYD2_k127_4331389_8 lipid kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001573 224.0
LYD2_k127_4335669_0 PFAM peptidase K01284,K01414 - 3.4.15.5,3.4.24.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 298.0
LYD2_k127_4335669_1 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001007 230.0
LYD2_k127_4335669_2 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000001768 222.0
LYD2_k127_4335669_5 Cytochrome c - - - 0.0000000000000000000521 103.0
LYD2_k127_4335669_6 protein kinase activity - - - 0.00000000000009675 85.0
LYD2_k127_4335669_7 YceI-like domain - - - 0.00000000001079 76.0
LYD2_k127_4335669_8 40-residue YVTN family beta-propeller repeat - - - 0.0000000004309 73.0
LYD2_k127_4336210_0 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001464 252.0
LYD2_k127_4336210_1 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001775 244.0
LYD2_k127_4336210_2 Histidine kinase - - - 0.0000000000000000000000000000000001025 152.0
LYD2_k127_4336210_3 histidine kinase A domain protein - - - 0.000000000000000000000000000001294 124.0
LYD2_k127_4336210_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11959 - - 0.00000000000000000000000007218 124.0
LYD2_k127_4336210_5 DNA Topoisomerase K03168 - 5.99.1.2 0.0000000000000003988 81.0
LYD2_k127_4342002_0 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 518.0
LYD2_k127_4342002_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 351.0
LYD2_k127_4342002_11 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.0003293 52.0
LYD2_k127_4342002_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004973 283.0
LYD2_k127_4342002_3 Carboxyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000001096 223.0
LYD2_k127_4342002_4 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000003234 198.0
LYD2_k127_4342002_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000453 130.0
LYD2_k127_4342002_6 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0000000000000000000000000001088 117.0
LYD2_k127_4342002_7 COGs COG3093 Plasmid maintenance system antidote protein K21498 - - 0.0000000000000000000000006695 107.0
LYD2_k127_4342002_8 DNA-binding transcription factor activity - - - 0.0000000000000000005197 94.0
LYD2_k127_4342002_9 Alpha/beta hydrolase family K21104 - 3.1.1.101 0.0000000008186 71.0
LYD2_k127_4349366_0 protein kinase activity - - - 1.103e-200 630.0
LYD2_k127_4349366_1 Phosphoesterase - - - 0.00000000000000000000000000000000000000000000000001209 198.0
LYD2_k127_4349401_0 5' nucleotidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 597.0
LYD2_k127_4349401_1 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006045 270.0
LYD2_k127_4355708_0 oxidoreductase activity K16066 - 1.1.1.381 0.000000000000000000000000000000000000000000000000000000000000000000000000001021 261.0
LYD2_k127_4355708_1 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000001641 79.0
LYD2_k127_4355708_3 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000004304 62.0
LYD2_k127_4355708_4 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000004882 55.0
LYD2_k127_4355708_5 Pectate lyase K01732,K15125,K20276 - 4.2.2.10 0.00004514 55.0
LYD2_k127_4378312_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 438.0
LYD2_k127_4378312_1 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000361 112.0
LYD2_k127_4383503_0 repeat protein - - - 0.0 1181.0
LYD2_k127_4383503_1 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 412.0
LYD2_k127_4383503_2 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008414 248.0
LYD2_k127_4383503_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000001171 172.0
LYD2_k127_4383503_4 NUDIX hydrolase - - - 0.00000000000000000007797 92.0
LYD2_k127_4388732_0 sequestering of TGFbeta in extracellular matrix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001082 269.0
LYD2_k127_4388732_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000003976 235.0
LYD2_k127_4388732_2 Alpha beta hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000002377 204.0
LYD2_k127_4388732_3 Receptor - - - 0.000000000000000000000000000000001281 139.0
LYD2_k127_4388732_4 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000001494 100.0
LYD2_k127_4388732_5 metalloendopeptidase activity K06261,K08867,K09187,K14972,K20371 - 2.1.1.43,2.7.11.1 0.0001323 55.0
LYD2_k127_4402073_0 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 325.0
LYD2_k127_4402073_1 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 316.0
LYD2_k127_4402073_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 307.0
LYD2_k127_4402073_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000001103 218.0
LYD2_k127_4402073_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000005278 100.0
LYD2_k127_4402073_5 HDOD domain - - - 0.000000000001388 78.0
LYD2_k127_4402073_6 Putative metal-binding motif - - - 0.0008117 51.0
LYD2_k127_4410373_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 1.829e-213 671.0
LYD2_k127_4410373_1 Acyl-CoA dehydrogenase, C-terminal domain K00249,K06446 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 565.0
LYD2_k127_4410373_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000004339 237.0
LYD2_k127_4410373_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07027 - - 0.0000000000000000008716 99.0
LYD2_k127_4417531_0 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 414.0
LYD2_k127_4417531_1 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009002 408.0
LYD2_k127_4417531_2 Lipase (class 3) K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000003893 223.0
LYD2_k127_4417531_3 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000004588 57.0
LYD2_k127_4420511_0 Serine Threonine protein kinase K12132 - 2.7.11.1 4.295e-247 787.0
LYD2_k127_4420511_1 Heat shock 70 kDa protein K04043 - - 1.141e-214 679.0
LYD2_k127_4420511_2 protein kinase activity - - - 1.337e-209 692.0
LYD2_k127_4420511_3 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 569.0
LYD2_k127_4420511_4 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 358.0
LYD2_k127_4420511_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000263 202.0
LYD2_k127_4420511_6 Tetratricopeptide repeat - - - 0.000000000000000001204 91.0
LYD2_k127_4420511_7 Heat shock 70 kDa protein K04043 - - 0.0000000000000007972 87.0
LYD2_k127_4428261_0 Iron-containing redox enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 373.0
LYD2_k127_4428261_1 PFAM Endonuclease Exonuclease phosphatase family - - - 0.000000000000000000000000000000000000000000000000000965 197.0
LYD2_k127_4428261_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000005088 154.0
LYD2_k127_4428261_3 surface antigen - - - 0.00000000000000000000000000004062 130.0
LYD2_k127_4429783_0 Choline/ethanolamine kinase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 337.0
LYD2_k127_4429783_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002535 239.0
LYD2_k127_4429783_2 rRNA methyltransferase activity K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000006333 169.0
LYD2_k127_4429783_3 Bacterial PH domain - - - 0.00000000000000000000000000000199 126.0
LYD2_k127_4429783_4 - - - - 0.00000000000000000000000002054 120.0
LYD2_k127_4434669_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 467.0
LYD2_k127_4434669_1 LysM domain protein K07261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 338.0
LYD2_k127_4434669_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000001627 239.0
LYD2_k127_4434669_3 WHG domain - - - 0.0000000000000000000000001066 110.0
LYD2_k127_4443694_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 492.0
LYD2_k127_4443694_1 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 421.0
LYD2_k127_4443694_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 317.0
LYD2_k127_4443694_3 Hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004243 274.0
LYD2_k127_4443694_4 PFAM aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000002694 211.0
LYD2_k127_4443694_5 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000004854 157.0
LYD2_k127_4443694_6 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.00041 49.0
LYD2_k127_4449017_0 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 5.355e-291 924.0
LYD2_k127_4449017_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008486 303.0
LYD2_k127_4450438_0 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 316.0
LYD2_k127_4450438_2 HB1, ASXL, restriction endonuclease HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003044 239.0
LYD2_k127_4450438_3 Belongs to the arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000004392 195.0
LYD2_k127_4450438_4 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000004383 175.0
LYD2_k127_4454732_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 470.0
LYD2_k127_4454732_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 366.0
LYD2_k127_4454732_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000005946 209.0
LYD2_k127_4454732_3 Putative restriction endonuclease - - - 0.00000000000000000000000000000000002477 142.0
LYD2_k127_4454732_4 Methionine biosynthesis protein MetW - - - 0.00000000000000001933 91.0
LYD2_k127_4455655_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 454.0
LYD2_k127_4455655_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000001234 210.0
LYD2_k127_4455655_2 O-Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000108 200.0
LYD2_k127_4455655_3 lactoylglutathione lyase activity - - - 0.00000000000000000001308 96.0
LYD2_k127_4455655_4 Transcriptional regulator - - - 0.00000000000003521 77.0
LYD2_k127_4455655_5 TIGRFAM esterase, PHB depolymerase family - - - 0.0001012 54.0
LYD2_k127_4459176_0 tRNA synthetases class II (D, K and N) K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 367.0
LYD2_k127_4459176_1 - - - - 0.0000000000000000000000000000000000000000000003868 171.0
LYD2_k127_4459176_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000000000000000004375 133.0
LYD2_k127_4459176_3 Flagellar biosynthetic protein FliQ K02420,K03227 - - 0.0000002378 55.0
LYD2_k127_4474030_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 447.0
LYD2_k127_4474030_1 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 329.0
LYD2_k127_4474030_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004991 259.0
LYD2_k127_4474030_3 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000002632 228.0
LYD2_k127_4474030_4 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001519 209.0
LYD2_k127_4474030_5 Hypothetical methyltransferase - - - 0.00000000000000000000000000000000000000006884 159.0
LYD2_k127_4474030_6 Protein of unknown function (DUF1679) - - - 0.00000000000000000000000000000000007158 148.0
LYD2_k127_450697_0 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 562.0
LYD2_k127_450697_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 493.0
LYD2_k127_450697_10 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000000000003155 189.0
LYD2_k127_450697_11 cellulose binding K01183,K01233,K13381 GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005623,GO:0008843,GO:0016787,GO:0016798,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.2.1.132,3.2.1.14,3.2.1.17 0.0000000000000000000000000000000000000000007376 177.0
LYD2_k127_450697_14 SnoaL-like domain K06893 - - 0.0000000000000000000000884 106.0
LYD2_k127_450697_15 Belongs to the Dps family K04047 - - 0.0000000001016 73.0
LYD2_k127_450697_16 oxidoreductase activity K07114 - - 0.000002008 57.0
LYD2_k127_450697_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 417.0
LYD2_k127_450697_3 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 293.0
LYD2_k127_450697_4 methylenetetrahydrofolate reductase (NAD(P)H) activity K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004341 280.0
LYD2_k127_450697_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004979 267.0
LYD2_k127_450697_6 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001486 260.0
LYD2_k127_450697_7 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000002153 213.0
LYD2_k127_450697_8 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000001616 196.0
LYD2_k127_450697_9 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000000000000000000000000001401 190.0
LYD2_k127_4515501_1 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000003342 219.0
LYD2_k127_4515501_2 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000008676 218.0
LYD2_k127_4515501_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000006934 173.0
LYD2_k127_4515501_4 Surface antigen K07277,K07278 - - 0.0000000000000001933 83.0
LYD2_k127_4520534_0 3-isopropylmalate dehydratase activity K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 1.85e-213 674.0
LYD2_k127_4520534_1 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 405.0
LYD2_k127_4520534_2 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 320.0
LYD2_k127_4520534_3 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 306.0
LYD2_k127_4520534_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000002113 237.0
LYD2_k127_4520534_5 - - - - 0.00000000000000000000000000000000000000001263 165.0
LYD2_k127_4520534_6 Transcriptional regulator, MarR family - - - 0.0001177 51.0
LYD2_k127_4521068_0 Belongs to the amidase family K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 498.0
LYD2_k127_4521068_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 444.0
LYD2_k127_4521068_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000331 291.0
LYD2_k127_4521068_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000005132 236.0
LYD2_k127_4521068_4 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.000000000000000000000000001096 113.0
LYD2_k127_4521068_5 SCP-2 sterol transfer family - - - 0.000000000000000000000001909 110.0
LYD2_k127_4521068_6 Universal stress protein family - - - 0.0000000000000000000000371 108.0
LYD2_k127_4529173_0 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 304.0
LYD2_k127_4529173_1 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008327 273.0
LYD2_k127_4529173_2 Protein of unknown function (DUF1254) - - - 0.000000000000000000000000000000000000188 147.0
LYD2_k127_4529173_3 PIN domain - - - 0.0000000000000000000005034 102.0
LYD2_k127_4529173_4 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000006966 81.0
LYD2_k127_4529173_5 - - - - 0.0000006709 55.0
LYD2_k127_4550539_0 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 425.0
LYD2_k127_4566417_0 3D domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003992 249.0
LYD2_k127_4566417_1 SEC-C motif K09858 - - 0.000000000000000000000000000000000000000000000000000000008698 203.0
LYD2_k127_4566417_2 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.00000000000000000000000000000000009152 136.0
LYD2_k127_4566417_3 AhpC/TSA antioxidant enzyme - GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009636,GO:0009987,GO:0016209,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000003538 104.0
LYD2_k127_4566417_4 COG2346, Truncated hemoglobins K06886 - - 0.0000000098 58.0
LYD2_k127_4569293_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000004289 232.0
LYD2_k127_4569293_1 Lactoylglutathione lyase K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000001575 207.0
LYD2_k127_4569293_2 - - - - 0.000000000000000000000000001378 114.0
LYD2_k127_4569293_3 Acid phosphatase homologues - - - 0.00000006111 63.0
LYD2_k127_4570279_0 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 7.641e-215 687.0
LYD2_k127_4570279_1 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 535.0
LYD2_k127_4570279_2 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 347.0
LYD2_k127_4570279_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 307.0
LYD2_k127_4570279_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.0000000000000000000000000000000000000000000000000000000003067 214.0
LYD2_k127_4570279_5 Methyltransferase FkbM domain - - - 0.000000000001865 70.0
LYD2_k127_4570299_0 Protein kinase domain K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006647 290.0
LYD2_k127_4570299_1 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000002436 189.0
LYD2_k127_4583063_0 PEGA domain K02014 - - 2.892e-200 649.0
LYD2_k127_4583063_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 301.0
LYD2_k127_4583063_2 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000009549 227.0
LYD2_k127_4583063_3 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000005697 173.0
LYD2_k127_4583063_4 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000003457 169.0
LYD2_k127_4583063_5 6-phospho-beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000817 170.0
LYD2_k127_4597389_0 Tryptophan halogenase K14266 - 1.14.19.9 3.293e-237 744.0
LYD2_k127_4597389_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 335.0
LYD2_k127_4597389_2 Flavin reductase like domain - - - 0.0000000000000000000000002274 109.0
LYD2_k127_4597389_3 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000005066 119.0
LYD2_k127_459916_0 O-methyltransferase K00543 - 2.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 311.0
LYD2_k127_459916_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000001361 222.0
LYD2_k127_459916_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000005366 145.0
LYD2_k127_459916_3 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000003927 115.0
LYD2_k127_459916_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.00000000002731 70.0
LYD2_k127_459916_5 positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.00004956 48.0
LYD2_k127_4600215_0 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 446.0
LYD2_k127_4600215_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 443.0
LYD2_k127_4600215_2 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 394.0
LYD2_k127_4613392_0 AMP-binding enzyme K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 391.0
LYD2_k127_4613392_1 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000004873 196.0
LYD2_k127_4613392_2 ribonuclease activity - - - 0.000000000000000000000000000000000000000000000000347 179.0
LYD2_k127_4613392_3 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000005391 102.0
LYD2_k127_4613392_4 oxidoreductase activity K07114 - - 0.0000000000000000005408 100.0
LYD2_k127_4613392_6 - - - - 0.000001383 55.0
LYD2_k127_4613392_8 toxin-antitoxin pair type II binding - - - 0.00004451 51.0
LYD2_k127_4613392_9 - - - - 0.00009794 52.0
LYD2_k127_4620324_0 ABC transporter, ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 553.0
LYD2_k127_4620324_1 Domain of unknown function (DUF3520) K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 508.0
LYD2_k127_4620324_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 437.0
LYD2_k127_4620324_3 Alkyl sulfatase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 364.0
LYD2_k127_4620324_5 Belongs to the ompA family K20276 - - 0.00000000009699 75.0
LYD2_k127_4636574_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 378.0
LYD2_k127_4636574_1 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001487 273.0
LYD2_k127_4636574_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000001303 165.0
LYD2_k127_4636574_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11103 - - 0.0000000000000008198 90.0
LYD2_k127_4637737_0 belongs to the aldehyde dehydrogenase family K00130,K00151 - 1.2.1.60,1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 574.0
LYD2_k127_4637737_1 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483,K16901,K21184,K21726 - 1.14.13.166,1.14.13.29,1.14.14.15,1.14.14.8,1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 503.0
LYD2_k127_4637737_2 AMP-binding enzyme K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 452.0
LYD2_k127_4637737_3 Fumarylacetoacetate (FAA) hydrolase family K05921 - 4.1.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 337.0
LYD2_k127_4637737_4 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006198 265.0
LYD2_k127_4637737_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000007719 221.0
LYD2_k127_4637737_6 Acetoacetate decarboxylase (ADC) K01574 - 4.1.1.4 0.00000000000000000000000000000000000000000000006218 188.0
LYD2_k127_4648586_0 ABC transporter permease K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 348.0
LYD2_k127_4648586_1 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000006502 232.0
LYD2_k127_4648586_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000002383 233.0
LYD2_k127_4648586_4 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000000000000000006728 190.0
LYD2_k127_4648586_5 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000004353 179.0
LYD2_k127_4648586_6 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000001767 172.0
LYD2_k127_4648586_7 - - - - 0.00000000000000000000000000000000000000002286 158.0
LYD2_k127_4648586_8 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000000000000233 131.0
LYD2_k127_4657637_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 597.0
LYD2_k127_4657637_1 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 484.0
LYD2_k127_4657637_2 COG0433 Predicted ATPase - - - 0.0000000000001773 74.0
LYD2_k127_4657637_3 oxidoreductase activity K07114 - - 0.0000000002173 73.0
LYD2_k127_4661898_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000009421 284.0
LYD2_k127_470029_0 UvrD-like helicase C-terminal domain - - - 1.382e-247 784.0
LYD2_k127_470029_1 GMC oxidoreductase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 395.0
LYD2_k127_470029_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 294.0
LYD2_k127_470029_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001242 278.0
LYD2_k127_470029_4 Family membership K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004036 278.0
LYD2_k127_470029_5 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000000000351 114.0
LYD2_k127_470029_7 FCD K05799 - - 0.00000000000000007707 91.0
LYD2_k127_470029_8 thiolester hydrolase activity - - - 0.00007118 52.0
LYD2_k127_4707506_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 610.0
LYD2_k127_4707506_1 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 468.0
LYD2_k127_4707506_2 Belongs to the ompA family K20276 - - 0.00000000000000000000000004501 115.0
LYD2_k127_4732998_0 Protein of unknown function (DUF1587) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 581.0
LYD2_k127_4732998_1 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 568.0
LYD2_k127_4732998_11 Belongs to the glycosyl hydrolase 3 family K02014,K16087,K20276 - - 0.000003937 59.0
LYD2_k127_4732998_12 - - - - 0.00004246 57.0
LYD2_k127_4732998_13 cell adhesion involved in biofilm formation - - - 0.00006997 49.0
LYD2_k127_4732998_2 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 551.0
LYD2_k127_4732998_3 ABC-type multidrug transport system ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 339.0
LYD2_k127_4732998_4 Nucleoside H+ symporter K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 303.0
LYD2_k127_4732998_6 two component, sigma54 specific, transcriptional regulator, Fis family K07714,K07715 - - 0.00000000000000000000000000000000000000000000007124 172.0
LYD2_k127_4732998_7 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000007947 167.0
LYD2_k127_4732998_8 CRS1_YhbY K07574 - - 0.00000000000000000000000000156 118.0
LYD2_k127_4732998_9 - - - - 0.00000000000000000000001345 117.0
LYD2_k127_4733901_0 polygalacturonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 603.0
LYD2_k127_4733901_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 570.0
LYD2_k127_4733901_2 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 431.0
LYD2_k127_4733901_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002919 288.0
LYD2_k127_4733901_4 endo-1,4-beta-xylanase activity K01179,K19668 - 3.2.1.4,3.2.1.91 0.000000000000000000000000002895 119.0
LYD2_k127_4733901_5 Protein of unknown function (DUF4230) - - - 0.0000000000000000000000002135 116.0
LYD2_k127_4733901_8 Protein of unknown function (DUF3592) - - - 0.00001129 53.0
LYD2_k127_4733901_9 Putative collagen-binding domain of a collagenase - - - 0.0001861 53.0
LYD2_k127_4737577_0 SpoVR like protein K06415 - - 3.222e-211 664.0
LYD2_k127_4737577_1 Belongs to the UPF0229 family K09786 - - 5.019e-194 609.0
LYD2_k127_4737577_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000002534 220.0
LYD2_k127_4737577_3 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000002582 190.0
LYD2_k127_4737577_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000001685 87.0
LYD2_k127_4737577_5 Fe-S-cluster oxidoreductase K06940 - - 0.0000000007279 67.0
LYD2_k127_4750786_0 MBOAT, membrane-bound O-acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 314.0
LYD2_k127_4750786_1 Kdo2-lipid A biosynthetic process K02517,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.0000000000000000000000000000000000000000000000000000000000000000291 235.0
LYD2_k127_4750786_2 SAM-dependent RNA methyltransferase - - - 0.000000000000000000000000000000000000000000000000000001071 197.0
LYD2_k127_4750786_4 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000018 146.0
LYD2_k127_4750786_5 Pfam:Methyltransf_26 - - - 0.000000000000000000008928 102.0
LYD2_k127_4750786_6 Trypsin-like peptidase domain - - - 0.000001007 61.0
LYD2_k127_4766766_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000007686 221.0
LYD2_k127_4766766_1 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000001971 82.0
LYD2_k127_4766766_2 Putative addiction module component - - - 0.0003338 46.0
LYD2_k127_476761_0 Domain of unknown function (DUF4175) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 560.0
LYD2_k127_476761_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 397.0
LYD2_k127_476761_2 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 368.0
LYD2_k127_476761_3 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 354.0
LYD2_k127_476761_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 324.0
LYD2_k127_476761_5 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 295.0
LYD2_k127_476761_6 Electron transfer flavoprotein, alpha subunit K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000006287 261.0
LYD2_k127_476761_7 - - - - 0.000000000000000000000000000000000000000000000000000006049 198.0
LYD2_k127_4769433_0 Sugar (and other) transporter K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 515.0
LYD2_k127_4769433_1 Protein of unknown function (DUF1254) - - - 0.000000000000000000000000000000000000000000000000000000003385 211.0
LYD2_k127_4769433_2 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000001674 193.0
LYD2_k127_4788705_0 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 316.0
LYD2_k127_4788705_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002219 271.0
LYD2_k127_4788705_2 glycerophosphoryl diester phosphodiesterase K01113,K01126 - 3.1.3.1,3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000002457 249.0
LYD2_k127_4803261_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.079e-274 892.0
LYD2_k127_4803261_1 Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 318.0
LYD2_k127_4817029_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 488.0
LYD2_k127_4817029_1 dioxygenase K00457,K16421 - 1.13.11.27,1.13.11.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 327.0
LYD2_k127_4817029_2 Pfam:TPM K08988 - - 0.00000000000000000002269 98.0
LYD2_k127_4828720_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 5.042e-200 635.0
LYD2_k127_4828720_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K18688 - 6.2.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 575.0
LYD2_k127_4828720_2 FAD dependent oxidoreductase K05898 - 1.3.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 565.0
LYD2_k127_4828720_3 metal-dependent hydrolase of the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 471.0
LYD2_k127_4828720_4 Integrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 316.0
LYD2_k127_4828720_5 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002836 245.0
LYD2_k127_4828720_6 Belongs to the GMC oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000007534 211.0
LYD2_k127_4830808_0 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000001951 166.0
LYD2_k127_4830808_1 toxin-antitoxin pair type II binding - - - 0.0000000000000000000000000000001573 126.0
LYD2_k127_4830808_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000009408 100.0
LYD2_k127_4830808_3 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000002877 88.0
LYD2_k127_4830808_4 DJ-1/PfpI family - - - 0.000000000006771 73.0
LYD2_k127_4830808_5 PIN domain - - - 0.000000000008495 73.0
LYD2_k127_4830808_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.00000000002976 66.0
LYD2_k127_4842423_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 469.0
LYD2_k127_4842423_1 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000006629 168.0
LYD2_k127_4845125_0 HD domain - - - 3.12e-219 689.0
LYD2_k127_4845125_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000001068 265.0
LYD2_k127_4845125_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000003504 227.0
LYD2_k127_4845125_3 FHA domain - - - 0.00000000000000000000000000000000000000000000682 181.0
LYD2_k127_4845125_4 EGF domain, unclasssified subfamily - - - 0.000000000000000000000000000001287 141.0
LYD2_k127_4845125_5 - - - - 0.000000000000000000000004302 117.0
LYD2_k127_4845125_7 iron ion homeostasis - - - 0.000000000005208 78.0
LYD2_k127_4851519_0 ABC transporter K06147,K06148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 451.0
LYD2_k127_4874501_1 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.000000000000000000006288 106.0
LYD2_k127_4877336_0 KR domain K00059 GO:0003674,GO:0003824,GO:0004303,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006066,GO:0006629,GO:0007568,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0014070,GO:0016125,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0018812,GO:0030283,GO:0032502,GO:0033764,GO:0033993,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044594,GO:0046983,GO:0048545,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071310,GO:0071407,GO:0071704,GO:1901360,GO:1901615,GO:1902652 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 351.0
LYD2_k127_4877336_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 325.0
LYD2_k127_4877336_2 PFAM AMP-dependent synthetase and ligase K18687 - 6.2.1.41 0.000000000000000000000000000000000000000000000000000000009368 206.0
LYD2_k127_4877336_3 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000002161 197.0
LYD2_k127_4877336_4 MaoC like domain - - - 0.0000000000000000000000000000000000000000002717 162.0
LYD2_k127_4877336_6 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000005508 62.0
LYD2_k127_4883200_0 WD40-like Beta Propeller Repeat - - - 8.458e-260 839.0
LYD2_k127_4883200_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 577.0
LYD2_k127_4883200_10 ATP-NAD kinase K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000004872 248.0
LYD2_k127_4883200_11 TIGRFAM YD repeat protein K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006304 277.0
LYD2_k127_4883200_12 Peptidase family M23 K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000003387 248.0
LYD2_k127_4883200_13 PilZ domain - - - 0.0000000000000000000000000000000000000000000001208 180.0
LYD2_k127_4883200_14 pseudouridine synthase activity K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000001391 180.0
LYD2_k127_4883200_17 CARDB domain-containing protein,subtilase family protease - - - 0.0000000000000000000000123 121.0
LYD2_k127_4883200_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 548.0
LYD2_k127_4883200_20 CARDB - - - 0.000002981 63.0
LYD2_k127_4883200_21 domain, Protein - - - 0.00003922 47.0
LYD2_k127_4883200_3 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217 414.0
LYD2_k127_4883200_4 Lipopolysaccharide kinase (Kdo/WaaP) family K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 402.0
LYD2_k127_4883200_5 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 380.0
LYD2_k127_4883200_6 Cell division protein FtsI penicillin-binding protein 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 361.0
LYD2_k127_4883200_7 Phosphoenolpyruvate synthase K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 374.0
LYD2_k127_4883200_8 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 291.0
LYD2_k127_4883200_9 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001062 299.0
LYD2_k127_4884277_0 dehydrogenase e1 component K00164 - 1.2.4.2 0.0 1111.0
LYD2_k127_4884277_1 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 1.384e-243 789.0
LYD2_k127_4884277_2 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 3.458e-202 639.0
LYD2_k127_4884277_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 438.0
LYD2_k127_4884277_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001065 258.0
LYD2_k127_4884277_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000009882 100.0
LYD2_k127_4884801_0 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 8.095e-195 619.0
LYD2_k127_4888321_0 Belongs to the thiolase family K00626 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003988,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005777,GO:0005782,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032787,GO:0034440,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:1901363,GO:1901575 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009492 581.0
LYD2_k127_4888321_1 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 528.0
LYD2_k127_4888321_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 409.0
LYD2_k127_4888321_3 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 403.0
LYD2_k127_4888321_4 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007171 282.0
LYD2_k127_4888321_5 2-nitropropane dioxygenase K00459 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007623,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0012505,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0042278,GO:0042451,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046903,GO:0048511,GO:0050896,GO:0051179,GO:0051234,GO:0055086,GO:0055114,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097708,GO:0099503,GO:0101002,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813 1.13.12.16 0.000000000000000000000000000000000000000000000000000000004023 204.0
LYD2_k127_4888321_6 FAD binding domain - - - 0.00000000000000000002021 93.0
LYD2_k127_4888891_0 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000001152 265.0
LYD2_k127_4888891_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000002746 59.0
LYD2_k127_491040_0 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 447.0
LYD2_k127_491040_1 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001079 245.0
LYD2_k127_491040_2 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001844 239.0
LYD2_k127_4927110_0 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 357.0
LYD2_k127_4927110_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000007317 252.0
LYD2_k127_4927110_2 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000000000004583 146.0
LYD2_k127_4929224_0 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000007107 124.0
LYD2_k127_4929224_1 pyrroloquinoline quinone binding - - - 0.00000007053 64.0
LYD2_k127_4929224_2 - - - - 0.00006105 54.0
LYD2_k127_4944315_0 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000185 288.0
LYD2_k127_4944315_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000003032 173.0
LYD2_k127_4944315_2 cellulose binding - - - 0.00005598 54.0
LYD2_k127_494538_0 AlkA N-terminal domain K13529 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 588.0
LYD2_k127_494538_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 542.0
LYD2_k127_494538_2 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003335 248.0
LYD2_k127_494538_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000003185 235.0
LYD2_k127_494538_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000001336 187.0
LYD2_k127_494538_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000002829 134.0
LYD2_k127_494538_6 Chlorite dismutase - - - 0.0000000000000000000000005465 113.0
LYD2_k127_4947042_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 601.0
LYD2_k127_4947042_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 309.0
LYD2_k127_4947042_5 - - - - 0.0000001695 63.0
LYD2_k127_4952494_0 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000006166 212.0
LYD2_k127_4952494_1 SMART serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000002206 208.0
LYD2_k127_4952494_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000001518 185.0
LYD2_k127_4957020_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 3.659e-222 706.0
LYD2_k127_4957020_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 329.0
LYD2_k127_4957020_2 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001177 283.0
LYD2_k127_4957020_3 Protein of unknown function (DUF1592) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004432 294.0
LYD2_k127_4957020_5 Protein of unknown function (DUF1552) - - - 0.000000000000000000000001588 121.0
LYD2_k127_4961923_0 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000104 186.0
LYD2_k127_4961923_1 Caspase domain - - - 0.000000000000000000000000000000000000000000000002101 194.0
LYD2_k127_4961923_2 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000002038 60.0
LYD2_k127_5013596_0 Belongs to the ompA family K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 452.0
LYD2_k127_5013596_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 370.0
LYD2_k127_5013596_2 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001605 277.0
LYD2_k127_5013596_3 Serine threonine protein kinase involved in cell cycle control - - - 0.000000000000000000000000000000000000000000000000000000000000000385 229.0
LYD2_k127_5013596_4 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000009033 245.0
LYD2_k127_5013596_5 depolymerase - - - 0.0000000000000000000000000000000000000000000000007697 192.0
LYD2_k127_5013596_6 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000001999 181.0
LYD2_k127_5013596_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000426 94.0
LYD2_k127_5019714_0 PFAM Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003068 258.0
LYD2_k127_5019714_1 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.0000000000000000000000000003247 121.0
LYD2_k127_503359_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 536.0
LYD2_k127_503359_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 476.0
LYD2_k127_503359_2 - - - - 0.00000004418 67.0
LYD2_k127_5051135_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 344.0
LYD2_k127_5051135_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000005955 136.0
LYD2_k127_5051135_2 SpoVT / AbrB like domain K07172 - - 0.00000000002432 71.0
LYD2_k127_5067182_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 336.0
LYD2_k127_5067182_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001183 278.0
LYD2_k127_5067182_2 Protein serine threonine phosphatase K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000003244 216.0
LYD2_k127_5067182_3 VanW like protein - - - 0.00000000000000000000000000000000000000000000000000000838 211.0
LYD2_k127_5067182_4 amine dehydrogenase activity - - - 0.0000000000000000000002814 111.0
LYD2_k127_5075234_0 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 581.0
LYD2_k127_5075234_1 Glutamate-cysteine ligase family 2(GCS2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009028 441.0
LYD2_k127_5075234_2 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000007302 230.0
LYD2_k127_5075234_3 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000001788 225.0
LYD2_k127_5075234_4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000004254 67.0
LYD2_k127_5086784_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 7.819e-297 929.0
LYD2_k127_5086784_1 Adenylate - - - 9.915e-220 720.0
LYD2_k127_5086784_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 599.0
LYD2_k127_5086784_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 543.0
LYD2_k127_5086784_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 311.0
LYD2_k127_5086784_5 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 311.0
LYD2_k127_5086784_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000036 278.0
LYD2_k127_5086784_7 HDOD domain - - - 0.000000000000000000000000000000000000000000008249 179.0
LYD2_k127_5086784_8 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000122 157.0
LYD2_k127_5088532_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 502.0
LYD2_k127_5088532_1 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001321 271.0
LYD2_k127_5088532_2 - - - - 0.000000000000000000000000000000000000000006695 161.0
LYD2_k127_5098318_0 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000387 294.0
LYD2_k127_5098318_1 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002435 264.0
LYD2_k127_5098318_2 of the beta-lactamase superfamily I K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000003296 224.0
LYD2_k127_5098318_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000003214 79.0
LYD2_k127_5098318_4 - - - - 0.0000001536 53.0
LYD2_k127_5103340_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 537.0
LYD2_k127_5103340_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 382.0
LYD2_k127_5103340_2 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000006985 215.0
LYD2_k127_5103340_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000001375 173.0
LYD2_k127_5133814_0 Signal transduction histidine kinase - - - 3.465e-210 678.0
LYD2_k127_5133814_1 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 479.0
LYD2_k127_5133814_2 FHA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 299.0
LYD2_k127_5133814_4 - - - - 0.0000000000309 68.0
LYD2_k127_5161785_0 UMP kinase activity K00947,K09903 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030151,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 395.0
LYD2_k127_5161785_1 UMP kinase activity K00947,K09903 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030151,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 358.0
LYD2_k127_5161785_2 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000006756 106.0
LYD2_k127_5161785_3 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.00000000000000000007335 93.0
LYD2_k127_5173453_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 9.271e-207 659.0
LYD2_k127_5173453_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 512.0
LYD2_k127_5173453_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005646 378.0
LYD2_k127_5200923_0 TIGRFAM Amino acid adenylation K04786,K13611 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 359.0
LYD2_k127_5200923_1 Membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005639 282.0
LYD2_k127_5200923_2 ADP-ribosylglycohydrolase - - - 0.0000000000008865 73.0
LYD2_k127_5200923_3 Phosphopantetheine attachment site K02078 - - 0.000000000002787 71.0
LYD2_k127_5225059_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 295.0
LYD2_k127_5225059_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000152 235.0
LYD2_k127_5225059_2 - - - - 0.0000000000000000000000000000000000000000000000000000004706 213.0
LYD2_k127_5231248_0 sulfuric ester hydrolase activity K01992 - - 0.0000000000000000000000003963 121.0
LYD2_k127_5231248_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000624 64.0
LYD2_k127_5231248_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0001168 55.0
LYD2_k127_5241861_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 6.67e-262 824.0
LYD2_k127_5241861_1 - - - - 0.000000000000000000000000000000001503 134.0
LYD2_k127_5241861_2 Phosphoesterase family K01114 - 3.1.4.3 0.000000000000000000000000745 122.0
LYD2_k127_5247794_0 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 2.961e-263 819.0
LYD2_k127_5247794_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 384.0
LYD2_k127_5247794_2 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000006604 220.0
LYD2_k127_5247794_3 Belongs to the UPF0311 family - - - 0.00000000000000000000000000000000000000000006529 169.0
LYD2_k127_5247794_4 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000006655 158.0
LYD2_k127_5247794_5 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K15520 - 2.3.1.189 0.00000000000000000000000001553 118.0
LYD2_k127_5257221_0 Type II and III secretion system protein K02453 - - 6.19e-243 771.0
LYD2_k127_5257221_1 General secretion pathway protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008921 505.0
LYD2_k127_5257221_2 PFAM Type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 484.0
LYD2_k127_5257221_3 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000000000000000000000000000000000000001588 168.0
LYD2_k127_5257221_5 General secretion pathway protein G K02456 - - 0.000000000000000000004326 104.0
LYD2_k127_5258029_0 Drug metabolite transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 312.0
LYD2_k127_5258029_1 Pyruvate phosphate dikinase - - - 0.00000000000000000000000000000000000000000000000000006915 203.0
LYD2_k127_5258029_2 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000001923 176.0
LYD2_k127_5258029_3 - - - - 0.0000000000000000000000000000000000001133 158.0
LYD2_k127_5258029_4 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000004099 148.0
LYD2_k127_5258029_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000143 120.0
LYD2_k127_5258029_6 membrane protein involved in D-alanine export K19294 - - 0.0000000000000002271 83.0
LYD2_k127_5258126_0 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 328.0
LYD2_k127_5258126_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 325.0
LYD2_k127_5258126_10 PFAM Glycosyl transferase family 2 K20444 - - 0.0002039 47.0
LYD2_k127_5258126_2 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 305.0
LYD2_k127_5258126_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 303.0
LYD2_k127_5258126_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001127 288.0
LYD2_k127_5258126_5 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000004974 245.0
LYD2_k127_5258126_6 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000048 219.0
LYD2_k127_5258126_7 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000272 228.0
LYD2_k127_5258126_8 nuclear chromosome segregation - - - 0.00000000000000000000000000000000002304 145.0
LYD2_k127_5258126_9 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.0000000000004187 73.0
LYD2_k127_5258509_0 phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 283.0
LYD2_k127_5258509_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001605 271.0
LYD2_k127_5258509_2 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006435 271.0
LYD2_k127_5258509_3 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001223 276.0
LYD2_k127_5258509_4 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.0000000000000000000000000000000000000000000000000000001323 207.0
LYD2_k127_5258509_5 sequence-specific DNA binding K02099,K13529,K15051 - 3.2.2.21 0.0000008154 56.0
LYD2_k127_5258509_6 - - - - 0.00004881 53.0
LYD2_k127_5258645_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 410.0
LYD2_k127_5258645_1 Membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 363.0
LYD2_k127_5258645_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000005633 221.0
LYD2_k127_5258645_11 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000004592 198.0
LYD2_k127_5258645_12 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000003627 177.0
LYD2_k127_5258645_13 FAD binding domain K05712 - 1.14.13.127 0.000000000000000000000000000000000000000004866 170.0
LYD2_k127_5258645_14 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000004254 78.0
LYD2_k127_5258645_15 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000005623 77.0
LYD2_k127_5258645_16 - - - - 0.000005128 56.0
LYD2_k127_5258645_2 Transcriptional regulator K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 351.0
LYD2_k127_5258645_3 PFAM cyclase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 335.0
LYD2_k127_5258645_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 323.0
LYD2_k127_5258645_5 fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 298.0
LYD2_k127_5258645_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001182 281.0
LYD2_k127_5258645_7 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002135 275.0
LYD2_k127_5258645_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001386 249.0
LYD2_k127_5258645_9 Pectinacetylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002988 248.0
LYD2_k127_5265268_2 PFAM Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 353.0
LYD2_k127_5265268_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002696 264.0
LYD2_k127_5265268_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008467 245.0
LYD2_k127_5265268_5 Predicted membrane protein (DUF2079) - - - 0.00000000000000000000000000000000000000000005653 182.0
LYD2_k127_5265268_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000001652 167.0
LYD2_k127_5265268_7 Methyltransferase domain - - - 0.000000000000000000000000000000000000004527 156.0
LYD2_k127_5265268_8 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000004119 149.0
LYD2_k127_5265268_9 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000007423 133.0
LYD2_k127_5266009_0 Aminotransferase K00813 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 480.0
LYD2_k127_5266009_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 475.0
LYD2_k127_5266009_2 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 350.0
LYD2_k127_5266009_3 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001068 279.0
LYD2_k127_5266009_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000008569 217.0
LYD2_k127_5266009_5 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000001279 153.0
LYD2_k127_5266009_6 Belongs to the glycosyl hydrolase 18 family - - - 0.0000000000000000000000000000000000408 148.0
LYD2_k127_5266009_7 - - - - 0.0000000000000000001063 102.0
LYD2_k127_5266009_8 Ovarian cancer-associated gene 2 K07561 GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0008150,GO:0010033,GO:0016787,GO:0032526,GO:0033993,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0050896,GO:1901700 2.5.1.108 0.000000000000003526 84.0
LYD2_k127_5266009_9 Calcium ion binding - GO:0002009,GO:0002165,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0007275,GO:0007424,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0007591,GO:0008150,GO:0008362,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0022404,GO:0031012,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040003,GO:0040005,GO:0042303,GO:0042335,GO:0044421,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0060429,GO:0060541,GO:0060562,GO:0065007,GO:0065008,GO:0090066 - 0.00002536 53.0
LYD2_k127_5284965_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 337.0
LYD2_k127_5284965_2 - - - - 0.0000000000000000000000000000002689 128.0
LYD2_k127_5296035_0 Fic/DOC family N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 554.0
LYD2_k127_5296035_1 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 453.0
LYD2_k127_5296035_2 Nucleoside 2-deoxyribosyltransferase - - - 0.000000000000000000000000000000000000000000000008927 177.0
LYD2_k127_5296035_3 MafB19-like deaminase - - - 0.0000000000000000000000000000000000000000005884 169.0
LYD2_k127_5296035_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000875 168.0
LYD2_k127_5296035_5 Putative esterase K07214 - - 0.000000000000000000000000000000001893 134.0
LYD2_k127_5296035_6 Fungal chitosanase of glycosyl hydrolase group 75 - - - 0.000000000000000000000006385 114.0
LYD2_k127_5296035_7 Glucosyl transferase GtrII - - - 0.000000000000000566 91.0
LYD2_k127_5296035_8 Putative prokaryotic signal transducing protein - - - 0.0000000000003273 74.0
LYD2_k127_5296035_9 Pfam:DUF385 - - - 0.0000004292 62.0
LYD2_k127_5316477_0 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003133 234.0
LYD2_k127_5316477_1 Homologues of snake disintegrins - - - 0.0000000000000000000000000000000000000000000000000000000009441 226.0
LYD2_k127_5316477_2 Galactose oxidase, central domain - - - 0.000000000000000000000000000000007347 147.0
LYD2_k127_5331131_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 482.0
LYD2_k127_5331131_1 Lipase maturation factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006629 263.0
LYD2_k127_5331131_2 Domain of unknown function (DUF5011) - - - 0.00000000000000000000001918 110.0
LYD2_k127_5338913_0 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 486.0
LYD2_k127_5338913_1 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 319.0
LYD2_k127_5338913_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002344 263.0
LYD2_k127_5338913_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000443 233.0
LYD2_k127_5338913_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001162 212.0
LYD2_k127_5338913_5 depolymerase - - - 0.00000000000000000000000000000000000000000001483 180.0
LYD2_k127_5338913_7 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000232 102.0
LYD2_k127_5338913_8 - - - - 0.00000001979 65.0
LYD2_k127_5338913_9 Calcium-binding EGF-like domain - GO:0002009,GO:0002165,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0007275,GO:0007424,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0007591,GO:0008150,GO:0008362,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0022404,GO:0031012,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040003,GO:0040005,GO:0042303,GO:0042335,GO:0044421,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0060429,GO:0060541,GO:0060562,GO:0065007,GO:0065008,GO:0090066 - 0.000004334 60.0
LYD2_k127_5352146_0 GTP-binding protein K06207 - - 3.206e-251 788.0
LYD2_k127_5352146_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.371e-200 648.0
LYD2_k127_5352146_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000006077 211.0
LYD2_k127_5352146_3 Protein of unknown function (DUF3105) - - - 0.00000000000000000000006685 107.0
LYD2_k127_5354423_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 1.976e-202 652.0
LYD2_k127_5354423_1 PFAM Glycosyl transferase family 2 K03669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 414.0
LYD2_k127_5354423_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002934 273.0
LYD2_k127_5354423_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000001733 243.0
LYD2_k127_5354423_4 - - - - 0.000000000000000000000000000000000001793 151.0
LYD2_k127_5354423_5 sequence-specific DNA binding K07726 - - 0.000000000000000000000000002215 118.0
LYD2_k127_5357386_0 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 574.0
LYD2_k127_5357386_1 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 400.0
LYD2_k127_5357386_2 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 316.0
LYD2_k127_5384873_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 621.0
LYD2_k127_5384873_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000004786 145.0
LYD2_k127_5384873_2 - - - - 0.00000000000001376 87.0
LYD2_k127_5390566_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000193 179.0
LYD2_k127_5390566_1 domain, Protein - - - 0.00000000001237 77.0
LYD2_k127_5390566_2 - - - - 0.00000000006944 73.0
LYD2_k127_5390566_3 - - - - 0.00001173 56.0
LYD2_k127_5390566_4 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00002459 56.0
LYD2_k127_5390796_0 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 558.0
LYD2_k127_5390796_1 Belongs to the long-chain O-acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 398.0
LYD2_k127_5390796_2 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 387.0
LYD2_k127_5390796_3 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001184 291.0
LYD2_k127_5390796_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000003868 234.0
LYD2_k127_5390796_5 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000005365 160.0
LYD2_k127_5390796_6 ABC-2 family transporter protein K01992 - - 0.00000000000000001325 93.0
LYD2_k127_5394869_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 363.0
LYD2_k127_5394869_1 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000002624 169.0
LYD2_k127_5394869_2 Stigma-specific protein, Stig1 - - - 0.0000000000000000000004387 113.0
LYD2_k127_5394869_3 PFAM metallophosphoesterase - - - 0.000000008522 70.0
LYD2_k127_5394869_4 Glycosyltransferase family 87 - - - 0.00000002282 65.0
LYD2_k127_5410456_0 NUBPL iron-transfer P-loop NTPase K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 483.0
LYD2_k127_5410456_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 473.0
LYD2_k127_5410456_10 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 - - - 0.00000000000000000000000000000000000001739 162.0
LYD2_k127_5410456_11 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000002878 153.0
LYD2_k127_5410456_12 beta-lactamase - - - 0.000000000000000000000000000000000001733 143.0
LYD2_k127_5410456_15 - - - - 0.0000000000000000000000000000000121 133.0
LYD2_k127_5410456_16 - - - - 0.0000000000000000000000000000003428 124.0
LYD2_k127_5410456_17 CBS domain K04767,K07168,K07182 - - 0.00000000000000000000004487 108.0
LYD2_k127_5410456_18 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000000001961 106.0
LYD2_k127_5410456_19 Evidence 2b Function of strongly homologous gene - - - 0.00000000000004392 76.0
LYD2_k127_5410456_2 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 440.0
LYD2_k127_5410456_3 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000132 286.0
LYD2_k127_5410456_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000311 278.0
LYD2_k127_5410456_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K10857 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000519 284.0
LYD2_k127_5410456_6 Allomyces macrogynus ATCC 38327 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004703 239.0
LYD2_k127_5410456_7 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000001113 235.0
LYD2_k127_5410456_8 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000001041 181.0
LYD2_k127_5410456_9 Methyltransferase domain - - - 0.0000000000000000000000000000000000000001843 169.0
LYD2_k127_54110_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004303 254.0
LYD2_k127_54110_1 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000007953 211.0
LYD2_k127_54110_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000158 108.0
LYD2_k127_54110_3 Capsular polysaccharide biosynthesis protein CapK K01912 - 6.2.1.30 0.000000004082 63.0
LYD2_k127_54110_4 COG2771 DNA-binding HTH domain-containing proteins - - - 0.000159 53.0
LYD2_k127_54110_5 helix_turn_helix, Lux Regulon - - - 0.0006635 51.0
LYD2_k127_5413833_0 amine dehydrogenase activity - - - 3.864e-211 719.0
LYD2_k127_5413833_1 reverse transcriptase - - - 0.00000000000000000000000000000000000012 160.0
LYD2_k127_5413833_2 membrane - - - 0.00000000000000000000000000195 130.0
LYD2_k127_5413833_3 - - - - 0.0000000000000000001405 104.0
LYD2_k127_5413833_4 Belongs to the peptidase S8 family - - - 0.00000000000000000112 103.0
LYD2_k127_5413833_5 serine-type endopeptidase activity - - - 0.000000005142 71.0
LYD2_k127_5413833_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000009081 50.0
LYD2_k127_5413833_7 peptidyl-tyrosine sulfation - - - 0.0008562 43.0
LYD2_k127_5416426_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 615.0
LYD2_k127_5416426_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 423.0
LYD2_k127_5416426_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000008832 166.0
LYD2_k127_5416426_3 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000001321 157.0
LYD2_k127_5416426_4 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000004225 139.0
LYD2_k127_5416426_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000001665 98.0
LYD2_k127_5431050_0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000000000000000000001843 158.0
LYD2_k127_5432309_0 Multicopper oxidase K22348 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 625.0
LYD2_k127_5432309_1 Belongs to the pseudouridine synthase RluA family K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000009784 284.0
LYD2_k127_5432309_2 ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000007386 232.0
LYD2_k127_5432309_3 Outer membrane efflux protein - - - 0.00000000000000000000003174 114.0
LYD2_k127_5444293_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 617.0
LYD2_k127_5444293_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 516.0
LYD2_k127_5444293_2 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 306.0
LYD2_k127_5444293_3 Aldehyde dehydrogenase K00128,K00130 - 1.2.1.3,1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000218 280.0
LYD2_k127_5444293_4 Serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002246 278.0
LYD2_k127_5444293_5 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000003837 103.0
LYD2_k127_5444293_6 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000005022 72.0
LYD2_k127_5444293_7 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000006148 68.0
LYD2_k127_5444293_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000003156 64.0
LYD2_k127_5456569_0 Putative zinc-finger K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009789 353.0
LYD2_k127_5456569_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000008509 221.0
LYD2_k127_5456569_2 - - - - 0.000000000000000000000000000000000000000000000000000001504 206.0
LYD2_k127_5456569_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000001174 121.0
LYD2_k127_5456569_5 Thioredoxin K03671 - - 0.0000000000000008549 86.0
LYD2_k127_5464701_3 Aminoglycoside phosphotransferase - - - 0.000000002331 66.0
LYD2_k127_5473699_0 5-formyltetrahydrofolate cyclo-ligase activity K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 471.0
LYD2_k127_5473699_1 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000000005698 136.0
LYD2_k127_5473699_2 Putative restriction endonuclease - - - 0.00000000000000000000000000000583 126.0
LYD2_k127_5473699_3 Protein of unknown function (DUF3455) - - - 0.0000000000000000000004291 107.0
LYD2_k127_5473699_4 PFAM metallophosphoesterase K07098 - - 0.000000000000008832 74.0
LYD2_k127_5473699_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00001409 51.0
LYD2_k127_5474117_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 3.415e-204 666.0
LYD2_k127_5474117_1 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 475.0
LYD2_k127_5474117_2 Carboxylesterase family K01066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 355.0
LYD2_k127_5474117_3 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000007448 135.0
LYD2_k127_5474117_4 Periplasmic Protein - - - 0.000000000000000000004975 102.0
LYD2_k127_5485097_0 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001835 236.0
LYD2_k127_5485097_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000002186 181.0
LYD2_k127_5485097_2 SdrD B-like domain - - - 0.0000000000001412 79.0
LYD2_k127_5485097_3 - - - - 0.0000000000005818 82.0
LYD2_k127_5494243_0 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 396.0
LYD2_k127_5494243_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000002044 232.0
LYD2_k127_5494243_3 - - - - 0.00000000000000000000000000000000000000000000000000000000004046 214.0
LYD2_k127_5494243_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000003223 91.0
LYD2_k127_5494243_5 - - - - 0.000156 55.0
LYD2_k127_5498755_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 288.0
LYD2_k127_5498755_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 298.0
LYD2_k127_5498755_2 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000001611 160.0
LYD2_k127_5506340_0 Lamin Tail Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 299.0
LYD2_k127_5506340_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000005109 213.0
LYD2_k127_5506340_2 phospholipase C K21302 - 3.1.3.64 0.00000000000000000000000000000000000000000000004086 185.0
LYD2_k127_5506340_3 OmpA family K02557 - - 0.00000000000000000000000000000000000000000008664 170.0
LYD2_k127_5512925_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 433.0
LYD2_k127_5512925_1 dioxygenase K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 407.0
LYD2_k127_5512925_2 WHG domain - - - 0.0000000000000000000000000000000000000000000000004173 181.0
LYD2_k127_5512925_3 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000000000000000000000000003389 145.0
LYD2_k127_5512925_4 PQQ enzyme repeat K00117 - 1.1.5.2 0.0004618 50.0
LYD2_k127_5516937_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 9.941e-212 674.0
LYD2_k127_5516937_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 555.0
LYD2_k127_5516937_10 Protein of unknown function (DUF5131) - - - 0.00000000002432 68.0
LYD2_k127_5516937_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000002407 210.0
LYD2_k127_5516937_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000003227 187.0
LYD2_k127_5516937_5 Belongs to the peptidase S1B family K01318 - 3.4.21.19 0.0000000000000000000000000000000000000000000000006999 192.0
LYD2_k127_5516937_6 Putative Ig domain - - - 0.000000000000000000000000000000000000000002457 175.0
LYD2_k127_5516937_8 Rhomboid family - - - 0.00000000000000001962 90.0
LYD2_k127_5529604_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 526.0
LYD2_k127_5529604_1 Acyl-CoA dehydrogenase, C-terminal domain K14448 - 1.3.8.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 384.0
LYD2_k127_5529604_2 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 381.0
LYD2_k127_5529604_3 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 345.0
LYD2_k127_5529604_4 Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair K03573 - - 0.000000000000000000000000000000000000000000000000000000000000002004 246.0
LYD2_k127_5529604_5 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000006978 165.0
LYD2_k127_5529604_6 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000009568 151.0
LYD2_k127_5529604_7 Protein of unknown function (DUF2786) - - - 0.00000000000000000001764 94.0
LYD2_k127_5529604_8 Extensin-like protein C-terminus - - - 0.00000000002397 74.0
LYD2_k127_5529604_9 ABC transporter K06147,K18104 - 3.6.3.44 0.000000001595 69.0
LYD2_k127_5538709_0 lipolytic protein G-D-S-L family - - - 0.0000000000001046 84.0
LYD2_k127_5563454_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 450.0
LYD2_k127_55789_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 324.0
LYD2_k127_55789_1 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001083 239.0
LYD2_k127_55789_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000001807 134.0
LYD2_k127_5594059_0 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 321.0
LYD2_k127_5594059_1 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 305.0
LYD2_k127_5594059_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000004798 259.0
LYD2_k127_5597314_0 Periplasmic binding protein domain K01999,K11959 - - 1.862e-214 676.0
LYD2_k127_5597314_1 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 522.0
LYD2_k127_5597314_10 short chain amide porin - - - 0.000000000000000000000000000000007324 143.0
LYD2_k127_5597314_2 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 491.0
LYD2_k127_5597314_3 Isochorismatase family K09020 - 3.5.1.110 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 379.0
LYD2_k127_5597314_4 Branched-chain amino acid ATP-binding cassette transporter K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 348.0
LYD2_k127_5597314_5 nickel cation binding K03189,K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 331.0
LYD2_k127_5597314_6 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 313.0
LYD2_k127_5597314_7 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 298.0
LYD2_k127_5597314_8 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.0000000000000000000000000000000000000000000000000000000003357 211.0
LYD2_k127_5597314_9 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000002659 157.0
LYD2_k127_5603497_0 N-terminal domain of oxidoreductase K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 380.0
LYD2_k127_5603497_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 330.0
LYD2_k127_5603497_2 alpha beta - - - 0.0000000000000003269 88.0
LYD2_k127_5603497_4 Belongs to the glycosyl hydrolase 32 family K01193 - 3.2.1.26 0.0003058 53.0
LYD2_k127_5605325_0 Putative glucoamylase K13688 - - 0.0 1039.0
LYD2_k127_5605325_1 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000004613 233.0
LYD2_k127_5605325_2 TonB-dependent Receptor Plug Domain - - - 0.000000000000002018 84.0
LYD2_k127_5618265_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1119.0
LYD2_k127_5618265_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 580.0
LYD2_k127_5618265_2 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 405.0
LYD2_k127_5618265_3 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 391.0
LYD2_k127_5618265_4 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000006752 209.0
LYD2_k127_5618265_5 HIT domain K02503 - - 0.00000000000000000000000000000000000000000000000002786 182.0
LYD2_k127_5618265_6 Tricorn protease PDZ domain K08676 - - 0.0005684 53.0
LYD2_k127_5619018_0 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 342.0
LYD2_k127_5619018_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000005047 185.0
LYD2_k127_5619018_3 Gaf domain - - - 0.000000000000000000000001119 120.0
LYD2_k127_5619018_4 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000001993 94.0
LYD2_k127_5619018_5 palmitoyl-(protein) hydrolase activity - - - 0.00000000001739 74.0
LYD2_k127_5619018_6 Copper amine oxidase N-terminal domain - - - 0.00004785 55.0
LYD2_k127_5631015_0 PAS sensor protein K13243 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0008081,GO:0008144,GO:0008150,GO:0009628,GO:0016787,GO:0016788,GO:0019825,GO:0019826,GO:0020037,GO:0036094,GO:0042578,GO:0043167,GO:0043169,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0070482,GO:0071111,GO:0097159,GO:1901363 3.1.4.52 6.289e-213 687.0
LYD2_k127_5631015_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 557.0
LYD2_k127_5631015_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000297 197.0
LYD2_k127_5631015_5 LemA family K03744 - - 0.00000000000000000000000000001172 128.0
LYD2_k127_5631015_6 Domain of unknown function (DUF4349) - - - 0.00000000001456 76.0
LYD2_k127_5633777_0 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 327.0
LYD2_k127_5633777_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 290.0
LYD2_k127_5643527_0 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 331.0
LYD2_k127_5643527_1 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000006098 242.0
LYD2_k127_5643527_2 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000002582 160.0
LYD2_k127_5643527_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000001362 133.0
LYD2_k127_5643527_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - - 0.0000000000000000000004524 103.0
LYD2_k127_5643527_5 Pentapeptide repeats (9 copies) - - - 0.0000000000000000002864 96.0
LYD2_k127_5643527_6 - - - - 0.00000000000244 76.0
LYD2_k127_5643527_7 cellulose binding - - - 0.000000001032 64.0
LYD2_k127_566694_0 Phospholipase D. Active site motifs. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 285.0
LYD2_k127_566694_1 - - - - 0.00000000000000000004802 97.0
LYD2_k127_566694_2 - - - - 0.00000000001051 67.0
LYD2_k127_566694_3 - - - - 0.0000000004175 64.0
LYD2_k127_566694_4 Domain of unknown function (DUF3368) K07066 - - 0.0000002489 58.0
LYD2_k127_5668676_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 506.0
LYD2_k127_5668676_2 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000002999 180.0
LYD2_k127_5668676_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000004253 157.0
LYD2_k127_5668676_4 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000001272 169.0
LYD2_k127_5668676_5 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000001412 164.0
LYD2_k127_5668676_6 Cupin domain - - - 0.000000000000000000000000000000000000009163 148.0
LYD2_k127_5671492_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0 1163.0
LYD2_k127_5671492_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 420.0
LYD2_k127_5671492_2 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000008067 216.0
LYD2_k127_5671492_3 FAD binding domain K00481 - 1.14.13.2 0.0000000000000000000000000000000000004621 143.0
LYD2_k127_5671492_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000265 148.0
LYD2_k127_5671492_5 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000004014 85.0
LYD2_k127_5673674_0 GlcNAc-PI de-N-acetylase - - - 1.468e-225 725.0
LYD2_k127_5673674_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 594.0
LYD2_k127_5673674_2 Bacillithiol biosynthesis BshC K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 387.0
LYD2_k127_5673674_3 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.00000000000000000000000000000000000000000000000000000004081 209.0
LYD2_k127_5685875_0 PFAM Glycosyl transferase family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000523 297.0
LYD2_k127_5685875_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000007049 246.0
LYD2_k127_5685875_3 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.00000000000000000000000000158 113.0
LYD2_k127_5685875_4 ectoine hydroxylase K10674 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016706,GO:0019752,GO:0032787,GO:0042399,GO:0042400,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.14.11.55 0.00002461 49.0
LYD2_k127_5705984_0 Surface antigen - - - 7.222e-246 784.0
LYD2_k127_5705984_1 ABC transporter K06147,K18889 - - 1.256e-205 657.0
LYD2_k127_5705984_2 ABC transporter transmembrane region K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 550.0
LYD2_k127_5717200_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1369.0
LYD2_k127_5717200_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000007512 197.0
LYD2_k127_5717200_2 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000000000000000001768 168.0
LYD2_k127_5719261_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 4.186e-194 612.0
LYD2_k127_5719261_1 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004972 265.0
LYD2_k127_5719261_2 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007173 267.0
LYD2_k127_5719261_3 Hydrolase Family 16 - - - 0.000000000000000000000000000000000000000000002703 171.0
LYD2_k127_5719261_4 Glutathione S-transferase, C-terminal domain K04097 - 2.5.1.18,5.3.99.2 0.000000000000000000000000000007899 127.0
LYD2_k127_5719261_5 cellulose binding - - - 0.0000000000000000001697 106.0
LYD2_k127_5725214_0 Sugar (and other) transporter K08178 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 486.0
LYD2_k127_5725214_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 422.0
LYD2_k127_5725214_2 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003743 251.0
LYD2_k127_5725214_3 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000001087 190.0
LYD2_k127_5725214_4 PFAM lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000002668 104.0
LYD2_k127_5725214_6 Putative restriction endonuclease - - - 0.00000000000001665 79.0
LYD2_k127_5729743_0 Protein kinase domain - - - 1.898e-234 765.0
LYD2_k127_5729743_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000001492 231.0
LYD2_k127_5734236_0 Domain of unknown function (DUF4215) - - - 0.000000000000000000000000000000000000000000000000000000000001492 219.0
LYD2_k127_5734236_1 Phytochelatin synthase - - - 0.000000000000000000000000000000000000000000000008936 183.0
LYD2_k127_5734236_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000175 174.0
LYD2_k127_5734236_3 PFAM CBS domain containing protein K07168 - - 0.000000000000000000001563 99.0
LYD2_k127_5734236_4 - - - - 0.0000003811 62.0
LYD2_k127_5734236_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00006949 48.0
LYD2_k127_5735132_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 398.0
LYD2_k127_5735132_1 FecR protein - - - 0.00000000000000000000000000000000000000000006505 177.0
LYD2_k127_5735132_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000001201 119.0
LYD2_k127_574106_0 ABC transporter, ATP-binding protein - - - 6.028e-275 858.0
LYD2_k127_574106_1 Bacterial regulatory protein, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 431.0
LYD2_k127_574106_2 unsaturated fatty acid biosynthetic process K04712 - 1.14.18.5,1.14.19.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 397.0
LYD2_k127_574106_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 381.0
LYD2_k127_574106_4 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 366.0
LYD2_k127_574106_5 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001521 277.0
LYD2_k127_574106_6 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000005552 197.0
LYD2_k127_574106_7 4Fe-4S binding domain - - - 0.000000000000000000000000000000000001733 143.0
LYD2_k127_574106_8 Belongs to the amidase family K01426 - 3.5.1.4 0.000002702 50.0
LYD2_k127_5741916_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.723e-249 784.0
LYD2_k127_5741916_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003592 273.0
LYD2_k127_5741916_4 - - - - 0.00000000000000000000000000002833 126.0
LYD2_k127_5743645_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.32e-196 625.0
LYD2_k127_5743645_1 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 422.0
LYD2_k127_5743645_2 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 353.0
LYD2_k127_5743645_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000006122 126.0
LYD2_k127_5743645_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000002069 115.0
LYD2_k127_5744880_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 553.0
LYD2_k127_5744880_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 489.0
LYD2_k127_5744880_2 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 467.0
LYD2_k127_5744880_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000003327 179.0
LYD2_k127_5744880_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000602 153.0
LYD2_k127_5744880_6 Acyl-ACP thioesterase K07107 - - 0.00000000000000000000000002236 119.0
LYD2_k127_5744880_8 regulator of chromosome condensation, RCC1 - - - 0.0000000002683 74.0
LYD2_k127_5748213_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 5.887e-320 1003.0
LYD2_k127_5748213_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 603.0
LYD2_k127_5748213_10 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000005483 241.0
LYD2_k127_5748213_11 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000006996 237.0
LYD2_k127_5748213_12 MAPEG family - - - 0.0000000000000000000000000000000000000000000000000000000002277 207.0
LYD2_k127_5748213_13 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.000000000000000000000000000000000000000000000000000000003385 211.0
LYD2_k127_5748213_14 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000827 181.0
LYD2_k127_5748213_15 DoxX - - - 0.000000000000000000000000000000000000001188 154.0
LYD2_k127_5748213_16 response to heat K07090 - - 0.0000000000000000000000000000000002419 143.0
LYD2_k127_5748213_17 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000004542 141.0
LYD2_k127_5748213_18 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000004171 119.0
LYD2_k127_5748213_19 Cytochrome c - - - 0.000000000000000000000004152 115.0
LYD2_k127_5748213_2 N,N-dimethylaniline monooxygenase activity K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 392.0
LYD2_k127_5748213_21 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000002089 102.0
LYD2_k127_5748213_22 Domain of unknown function (DU1801) - - - 0.000000000000000000001599 100.0
LYD2_k127_5748213_23 SnoaL-like polyketide cyclase - - - 0.000000000000000000071 94.0
LYD2_k127_5748213_24 Transcription factor zinc-finger - - - 0.00000000000000000128 93.0
LYD2_k127_5748213_25 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.000000000000000001461 95.0
LYD2_k127_5748213_26 FecR protein - - - 0.00000000000009136 85.0
LYD2_k127_5748213_27 Dockerin type I repeat - - - 0.00000000001514 76.0
LYD2_k127_5748213_28 FHA domain - - - 0.00000000002688 73.0
LYD2_k127_5748213_29 - - - - 0.00000000005793 74.0
LYD2_k127_5748213_3 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 384.0
LYD2_k127_5748213_30 - - - - 0.00000000113 71.0
LYD2_k127_5748213_31 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000001035 68.0
LYD2_k127_5748213_33 FCD K05799 - - 0.0000002848 59.0
LYD2_k127_5748213_34 amine dehydrogenase activity - - - 0.000137 53.0
LYD2_k127_5748213_35 Domain of unknown function (DUF4833) - - - 0.0006438 51.0
LYD2_k127_5748213_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 361.0
LYD2_k127_5748213_5 Binding-protein-dependent transport system inner membrane component K02050,K15599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 343.0
LYD2_k127_5748213_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 351.0
LYD2_k127_5748213_7 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 317.0
LYD2_k127_5748213_8 Protein kinase domain K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007164 271.0
LYD2_k127_5748213_9 Beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003663 258.0
LYD2_k127_5750655_0 Histidine kinase K07716 - 2.7.13.3 2.004e-220 708.0
LYD2_k127_5750655_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001802 246.0
LYD2_k127_5750655_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000001258 208.0
LYD2_k127_5750655_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000001562 63.0
LYD2_k127_5750655_4 chlorophyll binding - - - 0.0001844 51.0
LYD2_k127_5757881_0 ABC-type multidrug transport system ATPase component K21397 - - 4.058e-216 681.0
LYD2_k127_5757881_1 Aminotransferase K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007608 459.0
LYD2_k127_5757881_10 serine-type endopeptidase activity K07261 - - 0.0000000000000000000000000000000000000003459 162.0
LYD2_k127_5757881_11 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000003558 161.0
LYD2_k127_5757881_12 Epimerase dehydratase - - - 0.000000000000000000000000000000006435 144.0
LYD2_k127_5757881_13 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000005866 135.0
LYD2_k127_5757881_14 SnoaL-like domain - - - 0.000000000000000000000000000001327 126.0
LYD2_k127_5757881_16 Ferredoxin K04755,K11107 - - 0.000000000000000000001289 100.0
LYD2_k127_5757881_17 Putative restriction endonuclease - - - 0.00000004653 64.0
LYD2_k127_5757881_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 319.0
LYD2_k127_5757881_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 297.0
LYD2_k127_5757881_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004556 282.0
LYD2_k127_5757881_5 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000031 267.0
LYD2_k127_5757881_6 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001375 248.0
LYD2_k127_5757881_7 abc transporter atp-binding protein K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000001216 210.0
LYD2_k127_5757881_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000005446 178.0
LYD2_k127_5757881_9 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000005703 183.0
LYD2_k127_5758131_0 ABC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 436.0
LYD2_k127_5758131_1 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 347.0
LYD2_k127_5758131_3 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000006619 243.0
LYD2_k127_5758131_4 Phosphoinositide phospholipase C, Ca2+-dependent - - - 0.000000000000000000000000000000000000000000000000002994 195.0
LYD2_k127_5758131_5 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000001168 107.0
LYD2_k127_5758131_7 amine dehydrogenase activity - - - 0.00004562 54.0
LYD2_k127_5769448_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 329.0
LYD2_k127_5769448_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000593 237.0
LYD2_k127_5769448_3 Flagellar assembly protein FliH K02411,K03223 - - 0.000000003088 64.0
LYD2_k127_5776269_0 Glycosyl Transferase - - - 5.34e-293 919.0
LYD2_k127_5776269_1 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 448.0
LYD2_k127_5776269_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 306.0
LYD2_k127_5776269_4 Bacterial regulatory proteins, tetR family - - - 0.0000000006352 70.0
LYD2_k127_5778629_0 belongs to the thioredoxin family K03671,K05838,K07390,K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 304.0
LYD2_k127_5778629_1 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000003394 186.0
LYD2_k127_5778629_2 Transporter Component K07112 - - 0.0000000000000000000000000000000000000007986 154.0
LYD2_k127_5778629_3 transporter component K07112 - - 0.0000000000000000000000000000000000004194 144.0
LYD2_k127_5778629_4 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000005978 124.0
LYD2_k127_5778629_5 37-kD nucleoid-associated bacterial protein - - - 0.000000000000000004048 84.0
LYD2_k127_5778629_6 - - - - 0.00001104 57.0
LYD2_k127_5778629_7 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K15586 - - 0.00002938 53.0
LYD2_k127_5791563_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000004215 224.0
LYD2_k127_5791563_1 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000001052 214.0
LYD2_k127_5791563_2 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000000000000000000000000000000000000169 206.0
LYD2_k127_5791563_3 Chemotaxis protein CheY K03413 - - 0.0000000000001253 70.0
LYD2_k127_5791563_4 Protein of unknown function (DUF721) - - - 0.00000003378 64.0
LYD2_k127_5795950_0 Superfamily II DNA RNA helicases, SNF2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 472.0
LYD2_k127_5795950_1 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001939 265.0
LYD2_k127_5795950_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000001172 223.0
LYD2_k127_5795950_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 GO:0000272,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0005488,GO:0005975,GO:0005976,GO:0006073,GO:0006080,GO:0008150,GO:0008152,GO:0008810,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010391,GO:0010410,GO:0016052,GO:0016787,GO:0016788,GO:0016798,GO:0017144,GO:0030243,GO:0030245,GO:0030246,GO:0030247,GO:0030248,GO:0042737,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0045491,GO:0045493,GO:0046555,GO:0051273,GO:0051275,GO:0052689,GO:0071554,GO:0071704,GO:1901575,GO:2000884 3.2.1.4 0.000000000000000000000000000000000000000000000000526 192.0
LYD2_k127_5795950_4 PFAM oxidoreductase domain protein K09949 - - 0.000000000000000000000000000001898 132.0
LYD2_k127_5795950_5 Tellurite resistance protein TerB - - - 0.00008771 51.0
LYD2_k127_5797462_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K17292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 582.0
LYD2_k127_5797462_1 DNA-binding response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 446.0
LYD2_k127_5797462_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 436.0
LYD2_k127_5797462_3 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 291.0
LYD2_k127_5797462_4 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002883 289.0
LYD2_k127_5799715_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 9.171e-301 932.0
LYD2_k127_5799715_1 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007245 294.0
LYD2_k127_5799715_2 Transcriptional regulator - - - 0.00000000000000000000000000000003735 142.0
LYD2_k127_5799715_3 FecR protein - - - 0.00000000000000000000005017 112.0
LYD2_k127_5799715_4 Cytochrome c K08685 - 1.4.9.1 0.0000000000000000000003105 112.0
LYD2_k127_5799715_5 cellulose binding - - - 0.0000000000000000001742 104.0
LYD2_k127_5799715_6 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000004771 55.0
LYD2_k127_5816877_0 Tetratricopeptide repeat - - - 2.127e-221 712.0
LYD2_k127_5816877_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002139 247.0
LYD2_k127_5816877_2 Tetratricopeptide repeat - - - 0.0000005218 58.0
LYD2_k127_5818179_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 438.0
LYD2_k127_5818179_1 ATPase domain of DNA mismatch repair MUTS family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289 445.0
LYD2_k127_5818179_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 427.0
LYD2_k127_5818179_3 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000688 166.0
LYD2_k127_5820673_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.468e-218 686.0
LYD2_k127_5820673_1 serine threonine protein kinase - - - 3.038e-198 646.0
LYD2_k127_5820673_2 Glutamine synthetase type III K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 292.0
LYD2_k127_5820673_3 Acetyltransferase (GNAT) domain K03817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004759 272.0
LYD2_k127_5820673_4 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000002144 194.0
LYD2_k127_5820673_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000213 94.0
LYD2_k127_5836255_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 446.0
LYD2_k127_5836255_1 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA - - - 0.00000000000000000000000000000000000000000000000005414 193.0
LYD2_k127_5836255_2 Mur ligase middle domain protein K01929 - 6.3.2.10 0.0000000000000000000000000000000000001246 158.0
LYD2_k127_5836255_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000007993 117.0
LYD2_k127_5836255_4 - - - - 0.00000001008 67.0
LYD2_k127_5836255_5 PFAM polysaccharide biosynthesis protein - - - 0.00000001031 68.0
LYD2_k127_5836255_6 transcription factor jumonji K19219 - - 0.00000214 54.0
LYD2_k127_5836255_7 - - - - 0.0003125 53.0
LYD2_k127_5836531_0 Glycosyl hydrolase family 99 - - - 0.00000005226 67.0
LYD2_k127_5836531_1 lipolytic protein G-D-S-L family - - - 0.000004298 61.0
LYD2_k127_583740_0 chorismate binding enzyme K01851,K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 335.0
LYD2_k127_583740_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001003 287.0
LYD2_k127_583740_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000006265 157.0
LYD2_k127_583740_3 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.000000000000000000000000000000008912 135.0
LYD2_k127_5837835_0 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 352.0
LYD2_k127_5837835_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005657 262.0
LYD2_k127_5837835_2 alpha-ribazole phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000002405 214.0
LYD2_k127_5837835_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000002124 127.0
LYD2_k127_5837835_4 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000004277 128.0
LYD2_k127_5837835_5 Domain of unknown function (DUF1844) - - - 0.000000000000000001534 92.0
LYD2_k127_5837835_6 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000001643 89.0
LYD2_k127_584974_0 Bacterial regulatory protein, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 445.0
LYD2_k127_584974_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 340.0
LYD2_k127_584974_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001692 289.0
LYD2_k127_584974_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000001481 229.0
LYD2_k127_584974_4 4-vinyl reductase, 4VR K06382,K07013 - 3.1.3.16 0.0000000000000000000000000000000000000000000000003474 200.0
LYD2_k127_584974_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000001329 147.0
LYD2_k127_5856134_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 492.0
LYD2_k127_5856134_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 461.0
LYD2_k127_5856134_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 347.0
LYD2_k127_5856134_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 323.0
LYD2_k127_586101_0 SNF2 Helicase protein - - - 6.556e-320 1002.0
LYD2_k127_586101_1 transport system, permease and ATPase K02471 - - 2.412e-219 694.0
LYD2_k127_586101_10 Zeta toxin - - - 0.00001084 56.0
LYD2_k127_586101_12 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0002991 53.0
LYD2_k127_586101_2 SWIM zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002764 280.0
LYD2_k127_586101_3 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003713 247.0
LYD2_k127_586101_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000036 239.0
LYD2_k127_586101_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000005361 220.0
LYD2_k127_586101_6 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000001864 89.0
LYD2_k127_586101_7 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000003276 79.0
LYD2_k127_586101_9 PFAM IstB domain protein ATP-binding protein - - - 0.000007525 49.0
LYD2_k127_5864094_0 Belongs to the glycosyl hydrolase 35 family K12308 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 614.0
LYD2_k127_5864094_1 EGF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 543.0
LYD2_k127_5864094_2 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 533.0
LYD2_k127_5864094_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 296.0
LYD2_k127_5864094_4 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000002978 257.0
LYD2_k127_5864094_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000003674 230.0
LYD2_k127_5864094_6 - - - - 0.0000000000000000000000001988 108.0
LYD2_k127_5864094_7 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000004341 107.0
LYD2_k127_5864094_8 EGF domain K17307 - - 0.00000000003639 74.0
LYD2_k127_5864094_9 Antidote-toxin recognition MazE, bacterial antitoxin K18829 - - 0.0000004734 52.0
LYD2_k127_5871186_0 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 343.0
LYD2_k127_5871186_1 Reduction of activated sulfate into sulfite K00390 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 331.0
LYD2_k127_5871186_2 cellulose binding - - - 0.0007658 47.0
LYD2_k127_5890602_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 389.0
LYD2_k127_5890602_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002556 263.0
LYD2_k127_5890602_2 PHB/PHA accumulation regulator DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000003422 187.0
LYD2_k127_5890602_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000001989 130.0
LYD2_k127_5890602_4 Putative zinc-finger - - - 0.0000001304 63.0
LYD2_k127_5895513_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 614.0
LYD2_k127_5895513_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 347.0
LYD2_k127_5898287_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000004202 163.0
LYD2_k127_5898287_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000001176 141.0
LYD2_k127_589997_0 Cytochrome c554 and c-prime K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 518.0
LYD2_k127_589997_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000006137 246.0
LYD2_k127_589997_2 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000002355 153.0
LYD2_k127_589997_4 - - - - 0.00000000000000000001398 103.0
LYD2_k127_589997_5 Multidrug transporter MatE K03327 - - 0.0000000000000000375 90.0
LYD2_k127_589997_6 SPTR CHU large protein - - - 0.0004233 52.0
LYD2_k127_5903566_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.518e-229 734.0
LYD2_k127_5903566_1 succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 467.0
LYD2_k127_5903566_10 - - - - 0.000001058 59.0
LYD2_k127_5903566_2 DUF1704 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 469.0
LYD2_k127_5903566_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 425.0
LYD2_k127_5903566_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 398.0
LYD2_k127_5903566_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 383.0
LYD2_k127_5903566_6 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001152 275.0
LYD2_k127_5903566_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000423 181.0
LYD2_k127_5903566_8 - - - - 0.000000000000000002472 85.0
LYD2_k127_5906043_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1505.0
LYD2_k127_5906043_1 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0 1253.0
LYD2_k127_5906043_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 433.0
LYD2_k127_5906043_3 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 389.0
LYD2_k127_5906043_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 322.0
LYD2_k127_5906043_5 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 286.0
LYD2_k127_5906043_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001386 249.0
LYD2_k127_5906043_7 Glycosyl hydrolase catalytic core - - - 0.000000000000000000000000000000000000000000000000000000000006808 223.0
LYD2_k127_5906043_8 repeat protein - - - 0.00000000000000000000000001154 121.0
LYD2_k127_5906043_9 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000009154 110.0
LYD2_k127_5914310_0 Ketoacyl-synthetase C-terminal extension - - - 3.462e-317 1021.0
LYD2_k127_5914310_1 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 355.0
LYD2_k127_5916933_0 PFAM Phosphoglycerate mutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 494.0
LYD2_k127_5916933_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 431.0
LYD2_k127_5916933_10 - - - - 0.0001732 54.0
LYD2_k127_5916933_2 Response regulator receiver K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 414.0
LYD2_k127_5916933_3 PFAM Methyltransferase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 316.0
LYD2_k127_5916933_4 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000255 291.0
LYD2_k127_5916933_5 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000001852 228.0
LYD2_k127_5916933_6 LysM domain protein K07261 - - 0.0000000000000000000000000000000000000000000000000000000008195 213.0
LYD2_k127_5916933_7 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000508 199.0
LYD2_k127_5916933_8 - - - - 0.0000000000000000000000000005277 119.0
LYD2_k127_5916933_9 Alpha/beta hydrolase family - - - 0.0000002285 57.0
LYD2_k127_5917961_0 Domain of unknown function (DUF4215) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008469 518.0
LYD2_k127_5917961_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009245 272.0
LYD2_k127_5917961_3 acetyltransferase - - - 0.00000000000000000001155 102.0
LYD2_k127_5919239_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 456.0
LYD2_k127_5919239_1 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 407.0
LYD2_k127_5919239_2 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002501 292.0
LYD2_k127_5919239_4 Protein of unknown function (DUF962) - - - 0.000008448 53.0
LYD2_k127_5930380_0 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 439.0
LYD2_k127_5930380_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 426.0
LYD2_k127_5937020_1 belongs to the sigma-70 factor family - - - 0.000000000000000000000000007275 126.0
LYD2_k127_5944299_0 RelA SpoT domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 457.0
LYD2_k127_5944299_1 oxidoreductases (related to aryl-alcohol dehydrogenases) - GO:0003674,GO:0003824,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016491,GO:0016614,GO:0016616,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:1990928 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 432.0
LYD2_k127_5944299_10 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000192 181.0
LYD2_k127_5944299_11 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000005734 134.0
LYD2_k127_5944299_12 - - - - 0.00000000000000000000000006715 111.0
LYD2_k127_5944299_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000001482 84.0
LYD2_k127_5944299_16 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000004637 65.0
LYD2_k127_5944299_17 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000164 57.0
LYD2_k127_5944299_2 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 328.0
LYD2_k127_5944299_3 MBOAT, membrane-bound O-acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 322.0
LYD2_k127_5944299_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 304.0
LYD2_k127_5944299_5 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002741 289.0
LYD2_k127_5944299_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000002521 239.0
LYD2_k127_5944299_7 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000006427 210.0
LYD2_k127_5944299_8 Major Facilitator Superfamily K02445 - - 0.00000000000000000000000000000000000000000000000000006428 199.0
LYD2_k127_5944299_9 PFAM Glutathione S-transferase domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000005284 190.0
LYD2_k127_5959197_0 High confidence in function and specificity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 563.0
LYD2_k127_5959197_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 296.0
LYD2_k127_5959197_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000626 126.0
LYD2_k127_5959197_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000006094 89.0
LYD2_k127_5965451_0 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 514.0
LYD2_k127_5965451_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 484.0
LYD2_k127_5965451_2 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000005476 264.0
LYD2_k127_5965451_3 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000005282 258.0
LYD2_k127_5965618_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 320.0
LYD2_k127_5965618_1 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001457 259.0
LYD2_k127_5965618_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000009197 230.0
LYD2_k127_5965618_3 AMP binding - GO:0008150,GO:0040007 - 0.0000000000000000001208 96.0
LYD2_k127_5965618_4 Cytochrome c K08685 - 1.4.9.1 0.0000000000000000004199 100.0
LYD2_k127_596650_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 4.209e-252 783.0
LYD2_k127_596650_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 480.0
LYD2_k127_596650_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 427.0
LYD2_k127_596650_3 ABC transporter CydDC cysteine exporter (CydDC-E) family permease ATP-binding protein CydD K16013,K16014 - - 0.00000000000000000000000000000000001822 150.0
LYD2_k127_596650_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000001096 136.0
LYD2_k127_596650_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000001509 145.0
LYD2_k127_596650_6 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000004683 93.0
LYD2_k127_5966684_0 Belongs to the DNA photolyase family K01669 GO:0000003,GO:0000166,GO:0000719,GO:0001101,GO:0002252,GO:0002376,GO:0003006,GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006325,GO:0006338,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009314,GO:0009414,GO:0009415,GO:0009416,GO:0009605,GO:0009606,GO:0009607,GO:0009615,GO:0009628,GO:0009637,GO:0009638,GO:0009642,GO:0009645,GO:0009646,GO:0009648,GO:0009719,GO:0009725,GO:0009785,GO:0009791,GO:0009881,GO:0009882,GO:0009888,GO:0009893,GO:0009909,GO:0009911,GO:0009987,GO:0010033,GO:0010035,GO:0010073,GO:0010075,GO:0010118,GO:0010228,GO:0010244,GO:0010617,GO:0014070,GO:0016043,GO:0016604,GO:0016829,GO:0016830,GO:0017076,GO:0019222,GO:0019637,GO:0019725,GO:0022414,GO:0022603,GO:0023052,GO:0030003,GO:0030522,GO:0030554,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0033993,GO:0034641,GO:0035639,GO:0036094,GO:0038023,GO:0040008,GO:0042221,GO:0042592,GO:0042726,GO:0042752,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048037,GO:0048507,GO:0048509,GO:0048511,GO:0048518,GO:0048522,GO:0048571,GO:0048573,GO:0048574,GO:0048580,GO:0048582,GO:0048583,GO:0048608,GO:0048638,GO:0048731,GO:0048831,GO:0048856,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051094,GO:0051186,GO:0051239,GO:0051240,GO:0051276,GO:0051480,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055086,GO:0060089,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0071214,GO:0071478,GO:0071482,GO:0071483,GO:0071704,GO:0071840,GO:0071949,GO:0072387,GO:0072503,GO:0072507,GO:0090304,GO:0097159,GO:0097367,GO:0098542,GO:0098771,GO:0104004,GO:0140097,GO:1900618,GO:1901265,GO:1901360,GO:1901363,GO:1901371,GO:1901564,GO:1901700,GO:1902347,GO:1905421,GO:2000024,GO:2000026,GO:2000028,GO:2000241,GO:2000243,GO:2000377,GO:2000379 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 584.0
LYD2_k127_5966684_1 Pfam:Methyltransf_26 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 415.0
LYD2_k127_5966684_2 Protein of unknown function (DUF1592) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002641 295.0
LYD2_k127_5966684_3 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000000000006753 121.0
LYD2_k127_5978183_0 Zinc finger domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 351.0
LYD2_k127_5978183_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000002324 162.0
LYD2_k127_5978183_2 sensory perception of sound - - - 0.0004576 51.0
LYD2_k127_5980893_0 Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta - - - 2.877e-195 621.0
LYD2_k127_5980893_1 Pfam:Kce - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 441.0
LYD2_k127_5980893_2 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 310.0
LYD2_k127_5980893_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000007184 167.0
LYD2_k127_5980893_4 PAS fold - - - 0.000000000000000002152 96.0
LYD2_k127_5980893_5 NUDIX domain - - - 0.000000001697 61.0
LYD2_k127_5982294_0 Circularly permuted ATP-grasp type 2 - - - 3.22e-263 835.0
LYD2_k127_5982294_1 Putative amidoligase enzyme (DUF2126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 378.0
LYD2_k127_5982294_2 A circularly permuted ATPgrasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 359.0
LYD2_k127_5982294_3 transglutaminase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 316.0
LYD2_k127_5982294_4 transglutaminase-like - - - 0.000000000000000000000000000000000000000000000000000000001429 218.0
LYD2_k127_5982294_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000001343 198.0
LYD2_k127_5982294_6 calcium ion binding - - - 0.0007129 51.0
LYD2_k127_598404_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 312.0
LYD2_k127_598404_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002067 290.0
LYD2_k127_5987507_0 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 367.0
LYD2_k127_5987507_1 aminopeptidase N - - - 0.0000000000000000000000000000000000000000000000000001317 202.0
LYD2_k127_5987507_2 Chorismate mutase type II K04093 - 5.4.99.5 0.0000000000000001073 85.0
LYD2_k127_5987507_3 von Willebrand factor (vWF) type A domain - - - 0.00005418 46.0
LYD2_k127_6003900_0 Platelet-activating factor acetylhydrolase, isoform II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004455 276.0
LYD2_k127_6003900_1 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000142 256.0
LYD2_k127_6003900_2 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002 252.0
LYD2_k127_6003900_3 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000006461 159.0
LYD2_k127_6003900_4 oxidoreductase activity K07114 - - 0.000000000000000000000000000008019 136.0
LYD2_k127_6003900_5 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000001068 89.0
LYD2_k127_6004138_0 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 325.0
LYD2_k127_6004138_1 EVE domain - - - 0.0000000000000000000000000000000000000000000006033 171.0
LYD2_k127_6004138_2 Domain of unknown function (DUF4215) - - - 0.0000000000000000000000000000000000004985 161.0
LYD2_k127_6004138_3 Helix-turn-helix domain - - - 0.000000000000007718 83.0
LYD2_k127_6012919_0 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 357.0
LYD2_k127_6012919_1 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000003333 257.0
LYD2_k127_6012919_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000219 213.0
LYD2_k127_6012919_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000002011 160.0
LYD2_k127_6012919_4 unfolded protein binding K06142 - - 0.00000000000000000001075 94.0
LYD2_k127_6014348_0 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 395.0
LYD2_k127_6014348_1 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 381.0
LYD2_k127_6014348_2 N-4 methylation of cytosine K00571,K03497 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 317.0
LYD2_k127_6014348_3 PFAM RibD C-terminal domain K00082 - 1.1.1.193 0.00000000005646 70.0
LYD2_k127_6014348_4 CAAX protease self-immunity K07052 - - 0.0004823 52.0
LYD2_k127_6023141_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.843e-280 878.0
LYD2_k127_6023141_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 430.0
LYD2_k127_6023141_11 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000005746 186.0
LYD2_k127_6023141_12 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000002747 130.0
LYD2_k127_6023141_13 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K10697 - - 0.000000000000000000005414 106.0
LYD2_k127_6023141_14 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000003956 64.0
LYD2_k127_6023141_2 SMART PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 410.0
LYD2_k127_6023141_3 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 294.0
LYD2_k127_6023141_4 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 312.0
LYD2_k127_6023141_5 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009447 248.0
LYD2_k127_6023141_6 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000002155 241.0
LYD2_k127_6023141_7 RNA-DNA hybrid ribonuclease activity K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000001453 228.0
LYD2_k127_6023141_9 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000004676 214.0
LYD2_k127_6030824_0 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000002531 181.0
LYD2_k127_6030824_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000007557 195.0
LYD2_k127_60449_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 3.386e-236 752.0
LYD2_k127_60449_1 vancomycin resistance protein K18346 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 514.0
LYD2_k127_60449_2 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 461.0
LYD2_k127_60449_3 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 340.0
LYD2_k127_60449_4 DNA polymerase III K02341 - 2.7.7.7 0.000000000000000001847 94.0
LYD2_k127_60449_5 Psort location Cytoplasmic, score - - - 0.0000001089 62.0
LYD2_k127_6059793_0 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000004522 225.0
LYD2_k127_6059793_1 SEFIR domain - - - 0.00000000000000000004491 96.0
LYD2_k127_6060689_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 595.0
LYD2_k127_6063850_0 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 497.0
LYD2_k127_6063850_1 NADPH-dependent f420 reductase K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000002246 266.0
LYD2_k127_6063850_2 F420-0:Gamma-glutamyl ligase K12234,K22099 - 6.3.2.12,6.3.2.17,6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000000000004937 260.0
LYD2_k127_6063850_3 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000002211 249.0
LYD2_k127_6063850_5 Phosphatidylserine decarboxylase - - - 0.00000000000000000000000000000000000000002225 166.0
LYD2_k127_6063850_6 LPPG Fo 2-phospho-L-lactate transferase K11212 - 2.7.8.28 0.00000000000000000000000214 116.0
LYD2_k127_6063850_7 Domain of unknown function (DUF4215) K08654 - - 0.00001515 57.0
LYD2_k127_606752_0 Glycosyltransferase WbsX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 453.0
LYD2_k127_606752_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000016 288.0
LYD2_k127_606752_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000003574 193.0
LYD2_k127_606752_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000001292 65.0
LYD2_k127_6074265_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 406.0
LYD2_k127_6074265_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 343.0
LYD2_k127_6074265_10 Glycosyltransferase like family K07011 - - 0.00000000004917 68.0
LYD2_k127_6074265_2 AMP-binding enzyme C-terminal domain K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 351.0
LYD2_k127_6074265_3 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001386 259.0
LYD2_k127_6074265_4 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000007882 245.0
LYD2_k127_6074265_5 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000006638 204.0
LYD2_k127_6074265_6 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.000000000000000000000000000000000000000000000000004246 191.0
LYD2_k127_6074265_7 Domain of unknown function (DUF4920) - - - 0.000000000000000000000000000000006961 134.0
LYD2_k127_6074265_8 chorismate binding enzyme K01851,K02361,K02552 - 5.4.4.2 0.00000000000000000000005511 99.0
LYD2_k127_6074265_9 lytic transglycosylase - - - 0.00000000004409 75.0
LYD2_k127_6083374_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 567.0
LYD2_k127_6083374_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 416.0
LYD2_k127_6083374_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 401.0
LYD2_k127_6083374_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 342.0
LYD2_k127_6083374_4 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000319 191.0
LYD2_k127_6083374_5 Protein of unknown function (DUF533) K06596 - - 0.0000000000000000000000000000000000000009375 154.0
LYD2_k127_6083374_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000001696 52.0
LYD2_k127_6088623_0 protein-disulfide reductase (glutathione) activity K05360 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0008150,GO:0008152,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015036,GO:0015037,GO:0016491,GO:0016667,GO:0023051,GO:0023057,GO:0030154,GO:0031974,GO:0032502,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048869,GO:0050789,GO:0050794,GO:0055114,GO:0060548,GO:0065007,GO:0070013,GO:0080134,GO:0080135,GO:1902235,GO:1902236,GO:1902531,GO:1902532,GO:1903573,GO:1905897,GO:2001233,GO:2001234,GO:2001242,GO:2001243 1.8.4.2 0.00000000000000009121 94.0
LYD2_k127_6088623_1 Transglycosylase SLT domain K08307 - - 0.000005372 58.0
LYD2_k127_6095524_0 Ketoacyl-synthetase C-terminal extension - - - 3.306e-247 782.0
LYD2_k127_6095524_1 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000001284 193.0
LYD2_k127_6095524_2 OpgC protein - - - 0.00000000003664 74.0
LYD2_k127_6106366_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 430.0
LYD2_k127_6107349_0 Belongs to the heat shock protein 70 family - - - 3.994e-302 952.0
LYD2_k127_6107349_1 MreB/Mbl protein - - - 3.494e-245 778.0
LYD2_k127_6107349_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 422.0
LYD2_k127_6107349_3 Glycosyl hydrolase family 26 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 336.0
LYD2_k127_6107349_4 Hydrolase Family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005808 271.0
LYD2_k127_6107349_5 Domain of unknown function (DUF2760) - - - 0.000000000000000000000000000000000000000000000002705 179.0
LYD2_k127_611037_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 333.0
LYD2_k127_611037_1 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000289 242.0
LYD2_k127_611037_2 Transcriptional Regulator, AraC family - - - 0.000000000000000000000000000000000000000009099 171.0
LYD2_k127_611037_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000001429 72.0
LYD2_k127_611037_4 - - - - 0.0000001953 60.0
LYD2_k127_611037_5 - - - - 0.00004021 56.0
LYD2_k127_6125290_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002417 276.0
LYD2_k127_6125290_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008633 226.0
LYD2_k127_6125290_2 Psort location Cytoplasmic, score 8.96 - - - 0.00000002057 66.0
LYD2_k127_6136008_0 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 524.0
LYD2_k127_6136008_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000006622 128.0
LYD2_k127_6136008_3 Beta-lactamase - - - 0.000000000001333 80.0
LYD2_k127_6153585_0 N-acetyltransferase K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 334.0
LYD2_k127_6153585_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 297.0
LYD2_k127_6153585_2 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000005126 184.0
LYD2_k127_6153585_3 Alpha/beta hydrolase family - - - 0.0000000000000000003228 100.0
LYD2_k127_6153585_4 Trypsin-like serine protease - GO:0005575,GO:0005576 - 0.00004136 57.0
LYD2_k127_6154252_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.004e-236 743.0
LYD2_k127_6154252_1 amine oxidase K01854 - 5.4.99.9 3.006e-198 625.0
LYD2_k127_6154252_2 Domain of unknown function (DUF4215) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 437.0
LYD2_k127_6169136_0 ABC transporter K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 567.0
LYD2_k127_6169136_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 424.0
LYD2_k127_6169136_2 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000006717 267.0
LYD2_k127_6169136_3 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000001682 232.0
LYD2_k127_6169136_4 proteolysis - - - 0.00000000000000000000000000000000000000000000000000000000003593 214.0
LYD2_k127_6169136_5 PFAM chorismate K01665 - 2.6.1.85 0.000000000000000004642 96.0
LYD2_k127_6169136_6 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.0000000000000003857 87.0
LYD2_k127_6169664_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 483.0
LYD2_k127_6169664_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 408.0
LYD2_k127_6169664_2 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 338.0
LYD2_k127_6169664_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 315.0
LYD2_k127_6169664_4 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 325.0
LYD2_k127_6169664_5 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002947 284.0
LYD2_k127_6174909_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 561.0
LYD2_k127_6174909_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000003475 162.0
LYD2_k127_6176525_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 468.0
LYD2_k127_6176525_1 Von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 421.0
LYD2_k127_6176525_2 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 421.0
LYD2_k127_6176525_3 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 389.0
LYD2_k127_6176525_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000009637 174.0
LYD2_k127_6180275_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 6.79e-197 641.0
LYD2_k127_6180275_1 AAA C-terminal domain K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 348.0
LYD2_k127_6180275_2 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000006015 239.0
LYD2_k127_6180275_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000003156 229.0
LYD2_k127_6180275_4 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000246 140.0
LYD2_k127_618953_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1061.0
LYD2_k127_618953_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 443.0
LYD2_k127_618953_2 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 306.0
LYD2_k127_618953_3 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000222 255.0
LYD2_k127_618953_4 transcriptional regulator - - - 0.000000000000000000000000000689 121.0
LYD2_k127_618953_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000003953 120.0
LYD2_k127_618953_6 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000003713 98.0
LYD2_k127_618953_7 membrane - - - 0.00008544 47.0
LYD2_k127_6195584_0 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007853 272.0
LYD2_k127_6195584_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005018 263.0
LYD2_k127_6195584_2 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000003332 232.0
LYD2_k127_6195584_3 Sulfatase K19353 - - 0.00000000000000000000000000000000000000000000000000000000000000003872 244.0
LYD2_k127_6195584_4 cytochrome C peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0000000000000000000000000000000000000000000000000002377 198.0
LYD2_k127_6195584_5 Acyltransferase family - - - 0.000000000000000000000000000000000000006145 161.0
LYD2_k127_6195584_6 O-acyltransferase activity K00661 - 2.3.1.79 0.00000000000000000000000000000000000001329 152.0
LYD2_k127_6195584_7 Sortilin, neurotensin receptor 3, - - - 0.000000003044 69.0
LYD2_k127_6196513_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 585.0
LYD2_k127_6196513_1 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 366.0
LYD2_k127_6196513_2 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 354.0
LYD2_k127_6196513_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002216 261.0
LYD2_k127_6196513_4 PFAM Formylglycine-generating sulfatase enzyme K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000006295 232.0
LYD2_k127_6196513_5 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000051 180.0
LYD2_k127_6196513_6 CAAX protease self-immunity - - - 0.0000000000000000000000000000000006341 134.0
LYD2_k127_6196542_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000006834 216.0
LYD2_k127_6196542_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000007505 157.0
LYD2_k127_6196542_2 DoxX - - - 0.00000000000000000000000000001299 126.0
LYD2_k127_6196542_3 ECF sigma factor K03088 - - 0.0000000000000000000000000001842 128.0
LYD2_k127_6196542_5 Allergen V5 Tpx-1 family protein - - - 0.00000005874 66.0
LYD2_k127_6196542_6 - - - - 0.0000004227 64.0
LYD2_k127_6196542_7 domain, Protein K00573,K02335 - 2.1.1.77,2.7.7.7 0.0003775 52.0
LYD2_k127_6198289_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 8.741e-235 741.0
LYD2_k127_6198289_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 583.0
LYD2_k127_6198289_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 477.0
LYD2_k127_6198289_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000005338 145.0
LYD2_k127_6209971_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1266.0
LYD2_k127_6209971_1 Lipocalin-like domain - - - 1.508e-252 803.0
LYD2_k127_6209971_2 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.00000000000000000000000000000000006799 145.0
LYD2_k127_6209971_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000008381 113.0
LYD2_k127_6209971_4 - - - - 0.0002606 53.0
LYD2_k127_6209971_5 - - - - 0.0007662 50.0
LYD2_k127_6223533_0 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 302.0
LYD2_k127_6223533_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003766 268.0
LYD2_k127_6223533_2 Cytochrome C assembly protein - - - 0.000000000000000000000000002796 118.0
LYD2_k127_6223533_3 - - - - 0.000000000000000000000269 102.0
LYD2_k127_6223533_5 GGDEF domain - - - 0.00008611 56.0
LYD2_k127_6226481_0 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 475.0
LYD2_k127_6226481_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000009176 175.0
LYD2_k127_6226481_2 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000005768 156.0
LYD2_k127_6226481_3 FecR protein - - - 0.000000000000000000000000001004 127.0
LYD2_k127_6226481_5 cytochrome - - - 0.000000947 59.0
LYD2_k127_6241381_0 Belongs to the UPF0061 (SELO) family K08997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 590.0
LYD2_k127_6241381_1 glutathione transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000006321 220.0
LYD2_k127_6241381_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000003617 150.0
LYD2_k127_6241381_3 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000002455 128.0
LYD2_k127_6241381_4 Protein of unknown function (DUF3455) - - - 0.0000000000000005466 89.0
LYD2_k127_6241544_0 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000005958 192.0
LYD2_k127_6241544_1 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000001435 130.0
LYD2_k127_6241544_2 Mut7-C RNAse domain K00525 - 1.17.4.1 0.000000000000000000000000003927 115.0
LYD2_k127_6241544_4 Zinc-binding dehydrogenase - - - 0.00000303 57.0
LYD2_k127_6241544_5 Bacterial pre-peptidase C-terminal domain - - - 0.00001879 54.0
LYD2_k127_6244659_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0 1641.0
LYD2_k127_6244659_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 9.057e-224 701.0
LYD2_k127_6244659_10 Protein of unknown function (DUF1156) - - - 0.00000000000000000004519 99.0
LYD2_k127_6244659_2 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 345.0
LYD2_k127_6244659_3 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 286.0
LYD2_k127_6244659_4 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003822 267.0
LYD2_k127_6244659_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004147 273.0
LYD2_k127_6244659_6 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000004168 223.0
LYD2_k127_6244659_7 Rhomboid family K02441 - - 0.0000000000000000000000000000000000000000000002249 178.0
LYD2_k127_6244659_8 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000000000000000000000001443 144.0
LYD2_k127_6244659_9 Heavy-metal resistance - - - 0.000000000000000000001214 101.0
LYD2_k127_6249795_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 409.0
LYD2_k127_6249795_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 366.0
LYD2_k127_6249795_10 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000001856 112.0
LYD2_k127_6249795_12 Fibronectin type 3 domain K21571 - - 0.00000000000001037 86.0
LYD2_k127_6249795_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 323.0
LYD2_k127_6249795_3 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002563 298.0
LYD2_k127_6249795_4 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008576 287.0
LYD2_k127_6249795_5 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000001339 223.0
LYD2_k127_6249795_6 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000003039 190.0
LYD2_k127_6249795_7 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000002509 192.0
LYD2_k127_6249795_8 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000006394 174.0
LYD2_k127_6249795_9 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000019 168.0
LYD2_k127_6260440_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 312.0
LYD2_k127_6260440_1 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001882 273.0
LYD2_k127_6260440_2 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - - 0.000000000000000000000000000000000000000000000000003526 191.0
LYD2_k127_6260440_3 Phosphoesterase family - - - 0.0000000000000000000000000000000000000001163 164.0
LYD2_k127_6260440_5 Putative restriction endonuclease - - - 0.00000000000000000000000000000000001114 142.0
LYD2_k127_6260440_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000465 106.0
LYD2_k127_6260440_7 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000001198 78.0
LYD2_k127_6271359_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 468.0
LYD2_k127_6271359_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000008375 156.0
LYD2_k127_6271359_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000004231 69.0
LYD2_k127_6271359_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000003218 68.0
LYD2_k127_627739_0 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 616.0
LYD2_k127_627739_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 408.0
LYD2_k127_627739_2 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 317.0
LYD2_k127_627739_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000002348 164.0
LYD2_k127_627739_5 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000005322 141.0
LYD2_k127_627739_6 Putative metal-binding motif - - - 0.0000000000000000000000002268 119.0
LYD2_k127_6293094_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 336.0
LYD2_k127_6293094_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.00000000000000002058 96.0
LYD2_k127_6303385_0 Proton-conducting membrane transporter K12137 - - 2.989e-254 792.0
LYD2_k127_6303385_1 Proton-conducting membrane transporter K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 609.0
LYD2_k127_6303385_2 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 442.0
LYD2_k127_6303385_3 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007762 311.0
LYD2_k127_6303385_4 - K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003875 273.0
LYD2_k127_6304490_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 461.0
LYD2_k127_6304490_1 FHA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 423.0
LYD2_k127_6304490_2 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000007453 162.0
LYD2_k127_6304490_3 DUF218 domain - - - 0.000000000000000000000001838 109.0
LYD2_k127_6316031_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 408.0
LYD2_k127_6316031_1 NUDIX hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000006028 198.0
LYD2_k127_6316031_2 protein containing a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000002619 207.0
LYD2_k127_6316031_3 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000001132 110.0
LYD2_k127_6317031_0 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 5.403e-229 720.0
LYD2_k127_6317031_2 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000001153 235.0
LYD2_k127_6317031_4 metallopeptidase activity K06974 - - 0.00000000000000000000000000000004263 134.0
LYD2_k127_6317031_5 - - - - 0.000000000000004234 85.0
LYD2_k127_6319262_0 PFAM Aminotransferase class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000005913 190.0
LYD2_k127_6319262_1 enzyme related to lactoylglutathione lyase K06996 - - 0.000000000000000000000000000001513 131.0
LYD2_k127_6319262_2 Sulfatase K01133 - 3.1.6.6 0.00000000000000000001833 104.0
LYD2_k127_6320789_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 567.0
LYD2_k127_6320789_2 HEPN domain K09132 - - 0.000000000000000004552 94.0
LYD2_k127_6320789_3 Nucleotidyltransferase domain K07076 - - 0.00000001109 64.0
LYD2_k127_6320789_4 FAD linked oxidases, C-terminal domain K00104 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 1.1.3.15 0.00009659 51.0
LYD2_k127_6341987_0 Peptidase family M3 K01414 - 3.4.24.70 6.792e-205 660.0
LYD2_k127_639426_0 Carboxylesterase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 419.0
LYD2_k127_639426_1 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 399.0
LYD2_k127_639426_10 Peptidase_C39 like family - - - 0.000000000346 69.0
LYD2_k127_639426_11 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 - 1.1.1.193,3.5.4.26 0.0000006561 56.0
LYD2_k127_639426_2 Belongs to the glycosyl hydrolase family 6 K01083,K01190 - 3.1.3.8,3.2.1.23 0.000000000000000000000000000000000000000000000000005854 199.0
LYD2_k127_639426_3 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000001407 186.0
LYD2_k127_639426_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000001454 159.0
LYD2_k127_639426_5 Transcriptional - - - 0.0000000000000000000000000000000000008742 141.0
LYD2_k127_639426_6 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000004142 132.0
LYD2_k127_639426_7 Diguanylate cyclase - - - 0.00000000000000003271 93.0
LYD2_k127_639426_8 Tetratricopeptide repeat - - - 0.0000000000006826 81.0
LYD2_k127_639426_9 oxidoreductase activity K07114 - - 0.0000000000007089 77.0
LYD2_k127_63998_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 340.0
LYD2_k127_63998_1 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000004704 231.0
LYD2_k127_63998_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000006157 213.0
LYD2_k127_63998_3 Extensin-like protein C-terminus - - - 0.00000000000000000000000000000000000008725 151.0
LYD2_k127_63998_4 cell redox homeostasis K02199,K03671 - - 0.00000126 54.0
LYD2_k127_641574_0 Non-specific lipid-transfer protein K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 506.0
LYD2_k127_641574_1 Carboxyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 475.0
LYD2_k127_641574_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009289 260.0
LYD2_k127_641574_3 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000001621 251.0
LYD2_k127_641574_4 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000001697 218.0
LYD2_k127_641574_5 oxidoreductase activity K07114 - - 0.0000000000000000000000000001545 130.0
LYD2_k127_641574_6 PFAM Mo-dependent nitrogenase - - - 0.000000000000000000000008365 106.0
LYD2_k127_641574_7 Bacterial regulatory proteins, tetR family - - - 0.000000000006492 77.0
LYD2_k127_641574_8 Subtilase family - - - 0.0000000003565 72.0
LYD2_k127_646690_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.0 1339.0
LYD2_k127_646690_1 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000009997 194.0
LYD2_k127_646690_2 Peptidase inhibitor 16 K19919,K20412 GO:0000003,GO:0001558,GO:0001669,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005929,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0009566,GO:0009987,GO:0009988,GO:0010611,GO:0010614,GO:0010721,GO:0012505,GO:0014741,GO:0014743,GO:0016202,GO:0019953,GO:0022414,GO:0030141,GO:0030308,GO:0031410,GO:0031514,GO:0031982,GO:0035036,GO:0036126,GO:0040008,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043502,GO:0044057,GO:0044421,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0044703,GO:0045595,GO:0045596,GO:0045843,GO:0045926,GO:0046620,GO:0046621,GO:0048519,GO:0048523,GO:0048583,GO:0048634,GO:0048635,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051128,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051239,GO:0051241,GO:0051704,GO:0055021,GO:0055022,GO:0055024,GO:0055026,GO:0060284,GO:0060420,GO:0061050,GO:0061052,GO:0061117,GO:0065007,GO:0090257,GO:0097223,GO:0097224,GO:0097708,GO:0097729,GO:0099503,GO:0120025,GO:0120038,GO:1901861,GO:1901862,GO:1905207,GO:1905208,GO:2000026,GO:2000725,GO:2000726 - 0.000000000000000000000000003023 123.0
LYD2_k127_646690_3 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000002423 58.0
LYD2_k127_64935_0 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 384.0
LYD2_k127_64935_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 355.0
LYD2_k127_64935_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
LYD2_k127_64935_4 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000006274 181.0
LYD2_k127_64935_6 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000008356 145.0
LYD2_k127_64935_8 Metallo-beta-lactamase superfamily - - - 0.00001324 51.0
LYD2_k127_653717_0 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000002394 260.0
LYD2_k127_653717_1 ErfK ybiS ycfS ynhG family protein - - - 0.000000002432 71.0
LYD2_k127_657852_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008277 413.0
LYD2_k127_657852_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K15982,K19982 - 1.14.13.142 0.000000000000000000000000000000000000000000000000000000000000006689 226.0
LYD2_k127_657852_2 oxidoreductase activity, acting on CH-OH group of donors K16260 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045926,GO:0048519,GO:0050789,GO:0065007,GO:0071944 - 0.000000000000000000000000000002864 127.0
LYD2_k127_669756_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 627.0
LYD2_k127_669756_1 C-terminus of AA_permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007226 553.0
LYD2_k127_669756_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 531.0
LYD2_k127_669756_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000003044 132.0
LYD2_k127_669756_5 zinc ion binding - - - 0.00000000001306 68.0
LYD2_k127_672724_0 DEAD DEAH box helicase - - - 2.035e-309 968.0
LYD2_k127_672724_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000005258 118.0
LYD2_k127_672724_2 - - - - 0.00000000000000009368 86.0
LYD2_k127_672724_3 Von Willebrand factor type D domain - - - 0.000000001377 71.0
LYD2_k127_672724_4 Belongs to the peptidase S8 family - - - 0.000272 54.0
LYD2_k127_680580_0 Transmembrane protein of unknown function (DUF3556) - - - 1.775e-223 704.0
LYD2_k127_680580_1 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 312.0
LYD2_k127_680580_2 Protein of unknown function (DUF455) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005462 254.0
LYD2_k127_680580_3 - - - - 0.000000000000000000000000000000000000000000000000000005493 208.0
LYD2_k127_680580_5 COG1278 Cold shock K03704 - - 0.000000000000000000000007436 101.0
LYD2_k127_680580_6 membrane K02221 - - 0.0000000000009715 73.0
LYD2_k127_680580_7 bacterial-type flagellum-dependent cell motility - - - 0.000008707 60.0
LYD2_k127_68557_0 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 343.0
LYD2_k127_68557_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001162 274.0
LYD2_k127_68557_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000001291 121.0
LYD2_k127_68557_3 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000000157 111.0
LYD2_k127_68557_4 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000001083 106.0
LYD2_k127_68557_5 Domain of unknown function (DUF3413) K07014 - - 0.00000003117 67.0
LYD2_k127_685751_0 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 354.0
LYD2_k127_685751_1 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 297.0
LYD2_k127_685751_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000105 256.0
LYD2_k127_685751_3 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000002472 159.0
LYD2_k127_687021_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000003079 278.0
LYD2_k127_687021_1 Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC - - - 0.000000000000001513 85.0
LYD2_k127_687021_2 Protein conserved in bacteria - - - 0.0000000000001624 78.0
LYD2_k127_687021_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.7.7 0.00008203 51.0
LYD2_k127_692484_0 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 606.0
LYD2_k127_692484_1 PFAM transposase mutator type K07493 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 430.0
LYD2_k127_692484_2 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001916 282.0
LYD2_k127_692484_3 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.000000000000000000000000000000000000000000000000000000002861 203.0
LYD2_k127_699165_0 Belongs to the CarB family K01955 - 6.3.5.5 2.112e-199 634.0
LYD2_k127_699165_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.0000000000000000009365 91.0
LYD2_k127_699165_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000023 51.0
LYD2_k127_733695_0 Periplasmic protein TonB links inner and outer membranes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 456.0
LYD2_k127_733695_1 High confidence in function and specificity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 340.0
LYD2_k127_733695_3 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000001066 211.0
LYD2_k127_733695_4 Two component transcriptional regulator, winged helix family K07657 - - 0.00000000000000000000000000000000000000000000000000006619 202.0
LYD2_k127_733695_5 ExbD TolR K03559 - - 0.0000000000000000000000000000000000000001005 154.0
LYD2_k127_733695_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000001056 133.0
LYD2_k127_733695_8 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000001066 67.0
LYD2_k127_733695_9 similarity to GB AAN56270.1 - - - 0.0009359 48.0
LYD2_k127_734837_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 544.0
LYD2_k127_734837_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 477.0
LYD2_k127_734837_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 312.0
LYD2_k127_741459_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 520.0
LYD2_k127_741459_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 365.0
LYD2_k127_741459_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 305.0
LYD2_k127_741459_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002664 273.0
LYD2_k127_741459_4 Preprotein translocase SecG subunit K03075 - - 0.00000000000004565 78.0
LYD2_k127_741459_5 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000009041 74.0
LYD2_k127_745476_0 PFAM DAHP synthetase I KDSA K03856,K04518,K14170 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.5.1.54,4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 434.0
LYD2_k127_745476_1 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 360.0
LYD2_k127_745476_2 Sterol carrier protein - - - 0.0000000000000000000000006354 110.0
LYD2_k127_745476_3 gntR family K05799 - - 0.0000000000000000002008 97.0
LYD2_k127_745476_4 peptidylprolyl isomerase, FKBP-type K01802,K03772 - 5.2.1.8 0.00000000000000000173 85.0
LYD2_k127_76977_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 587.0
LYD2_k127_76977_2 - - - - 0.000000000000000000000000000004894 130.0
LYD2_k127_76977_3 Rieske [2Fe-2S] domain - - - 0.0000000000005395 79.0
LYD2_k127_76977_4 Thioredoxin-like - - - 0.00005188 48.0
LYD2_k127_771736_0 CBD_II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 471.0
LYD2_k127_771736_1 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005379 284.0
LYD2_k127_771736_2 - - - - 0.000000000000000000000000000000005145 141.0
LYD2_k127_791418_0 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 470.0
LYD2_k127_791418_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000007484 98.0
LYD2_k127_791418_3 PFAM Prokaryotic N-terminal methylation motif K02650 - - 0.000000008199 65.0
LYD2_k127_791418_4 general secretion pathway protein K02456,K02650,K02679,K08084 - - 0.0000001856 60.0
LYD2_k127_798393_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1595.0
LYD2_k127_798393_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 8.518e-293 923.0
LYD2_k127_798393_2 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000879 290.0
LYD2_k127_798393_3 SCP-2 sterol transfer family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003111 260.0
LYD2_k127_798393_4 Sulphur transport K07112 - - 0.0000000000000000000000000000001539 137.0
LYD2_k127_798393_5 CBS domain K04767,K07168,K07182 - - 0.000000000000000000000000000007538 124.0
LYD2_k127_798393_6 Sulphur transport K07112 - - 0.0000000000000000000141 107.0
LYD2_k127_798393_7 - - - - 0.00000000002171 77.0
LYD2_k127_809410_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1169.0
LYD2_k127_809410_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 398.0
LYD2_k127_809410_10 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0001006 53.0
LYD2_k127_809410_2 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 329.0
LYD2_k127_809410_3 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000886 282.0
LYD2_k127_809410_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000006722 222.0
LYD2_k127_809410_5 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000000006727 220.0
LYD2_k127_809410_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000004906 206.0
LYD2_k127_809410_7 Transport permease protein K01992,K09690 - - 0.0000000000000000000000000000000000002355 153.0
LYD2_k127_809410_8 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000005973 111.0
LYD2_k127_809410_9 - - - - 0.0000000000000000000008776 103.0
LYD2_k127_809618_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 475.0
LYD2_k127_809618_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 398.0
LYD2_k127_809618_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002206 257.0
LYD2_k127_809618_4 Serine Threonine protein kinase - - - 0.00000000000000000000000000001807 124.0
LYD2_k127_81491_0 Tetratricopeptide repeat - - - 1.38e-238 769.0
LYD2_k127_81491_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 5.394e-208 655.0
LYD2_k127_81491_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 309.0
LYD2_k127_81491_3 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001122 261.0
LYD2_k127_81491_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000001148 201.0
LYD2_k127_81491_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000189 190.0
LYD2_k127_81491_6 arylsulfatase activity - - - 0.00000000000000000000000001621 115.0
LYD2_k127_81491_8 Belongs to the peptidase S1 family K01311,K01346,K09632,K20751 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0006508,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0008150,GO:0008152,GO:0008233,GO:0009235,GO:0009987,GO:0016787,GO:0017144,GO:0019538,GO:0019725,GO:0030003,GO:0033013,GO:0042592,GO:0043170,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0048878,GO:0050801,GO:0051186,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0072503,GO:0072507,GO:0098771,GO:0140096,GO:1901360,GO:1901564 3.4.21.2,3.4.21.71,3.4.21.99 0.0000261 56.0
LYD2_k127_81491_9 Kelch motif - - - 0.00005423 56.0
LYD2_k127_82469_0 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000000000000000008674 238.0
LYD2_k127_82469_1 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000003233 191.0
LYD2_k127_82469_3 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.00000000000000000000000000000007781 140.0
LYD2_k127_82469_4 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000008881 133.0
LYD2_k127_82469_5 amine dehydrogenase activity - - - 0.00000000000005543 85.0
LYD2_k127_82469_6 Outer membrane lipoprotein Blc K03098 - - 0.000007581 49.0
LYD2_k127_840660_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000007665 148.0
LYD2_k127_840660_2 PQQ-like domain - - - 0.00000000000000001447 95.0
LYD2_k127_840660_3 RNase_H superfamily K07502 - - 0.00000000006352 68.0
LYD2_k127_865366_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 413.0
LYD2_k127_865366_1 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 317.0
LYD2_k127_865366_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000001065 195.0
LYD2_k127_872472_0 Domain of unknown function DUF87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 362.0
LYD2_k127_872472_1 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000001134 135.0
LYD2_k127_872472_2 Helix-turn-helix domain - - - 0.000000000000000003994 92.0
LYD2_k127_88603_0 FAD linked oxidases, C-terminal domain K00104 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 465.0
LYD2_k127_88603_1 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000001247 114.0
LYD2_k127_888208_1 short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000766 197.0
LYD2_k127_888208_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K03624,K04760 - - 0.0000000000000000000000000000000000009358 149.0
LYD2_k127_888208_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000001083 114.0
LYD2_k127_888208_4 BON domain - - - 0.000000004091 69.0
LYD2_k127_888384_0 Tellurite resistance protein TerB - - - 0.000000000000004801 84.0
LYD2_k127_888384_1 Periplasmic protein thiol disulfide oxidoreductase, DsbE subfamily - - - 0.0000000003238 74.0
LYD2_k127_888384_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000002246 71.0
LYD2_k127_888384_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000272 57.0
LYD2_k127_890917_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 636.0
LYD2_k127_890917_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 516.0
LYD2_k127_890917_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 338.0
LYD2_k127_891939_0 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 325.0
LYD2_k127_891939_1 Protein kinase domain K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003328 288.0
LYD2_k127_891939_2 - K07283 - - 0.000000000000000000000000000000000000000000000000000003315 202.0
LYD2_k127_891939_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000000003165 175.0
LYD2_k127_891939_4 protein trimerization - - - 0.0000000000000000000000000000000000000000003215 172.0
LYD2_k127_891939_5 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000008956 130.0
LYD2_k127_891939_6 Pyridoxamine 5'-phosphate K07006 - - 0.00000000000000003311 83.0
LYD2_k127_891939_7 Cytochrome c K08685 - 1.4.9.1 0.000000003218 68.0
LYD2_k127_900129_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 415.0
LYD2_k127_900129_1 alpha beta - - - 0.0000000000000000000000000005365 126.0
LYD2_k127_900129_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000001059 117.0
LYD2_k127_90417_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 6.68e-248 794.0
LYD2_k127_90417_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000001797 174.0
LYD2_k127_90417_2 Protein of unknown function (DUF503) K09764 - - 0.000000000000000000000005181 106.0
LYD2_k127_90417_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000349 71.0
LYD2_k127_90417_4 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 0.000000000007308 68.0
LYD2_k127_913776_0 aconitate hydratase K01681 - 4.2.1.3 1.028e-223 709.0
LYD2_k127_913776_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 2.811e-219 690.0
LYD2_k127_913776_2 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 GO:0003674,GO:0003824,GO:0003924,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 356.0
LYD2_k127_913776_3 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000009788 239.0
LYD2_k127_913776_4 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000001128 188.0
LYD2_k127_913776_5 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000002672 132.0
LYD2_k127_913776_6 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00360,K00362,K02192 - 1.7.1.15 0.00005706 49.0
LYD2_k127_920956_0 repeat protein - - - 0.0 1416.0
LYD2_k127_920956_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 304.0
LYD2_k127_920956_2 GGDEF domain - - - 0.0000000000000000000007896 102.0
LYD2_k127_920956_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000002026 87.0
LYD2_k127_920956_4 COG1233 Phytoene dehydrogenase and related proteins - - - 0.000005616 57.0
LYD2_k127_937849_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3 1.155e-207 661.0
LYD2_k127_937849_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 349.0
LYD2_k127_937849_2 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000002484 204.0
LYD2_k127_937849_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000001804 187.0
LYD2_k127_938040_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1353.0
LYD2_k127_938040_1 PGAP1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000136 250.0
LYD2_k127_938040_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000007017 224.0
LYD2_k127_938040_3 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000000000000000000000000000003703 217.0
LYD2_k127_938040_4 negative regulation of translational initiation - - - 0.000000000000000000000000005161 116.0
LYD2_k127_944462_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 587.0
LYD2_k127_944462_1 epimerase dehydratase K02473,K08679 - 5.1.3.6,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 394.0
LYD2_k127_944462_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 307.0
LYD2_k127_944462_3 - - - - 0.0000000000000000000000000000000000000001915 166.0
LYD2_k127_944462_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000008676 108.0
LYD2_k127_944462_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000001032 53.0
LYD2_k127_950462_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 428.0
LYD2_k127_950462_1 Glycoside hydrolase family 44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 398.0
LYD2_k127_950462_2 - - - - 0.0000000000000000000000000000000000000000000000000531 183.0
LYD2_k127_950706_0 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 453.0
LYD2_k127_950706_1 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000003653 227.0
LYD2_k127_950706_2 F COG0518 GMP synthase - Glutamine amidotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000001279 223.0
LYD2_k127_950706_3 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000001535 199.0
LYD2_k127_950706_4 peptidyl-tyrosine sulfation - - - 0.0001389 54.0
LYD2_k127_95103_0 Peptidase family M13 K01415,K07386 - 3.4.24.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 393.0
LYD2_k127_95103_1 iron ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000007339 241.0
LYD2_k127_95103_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000005467 190.0
LYD2_k127_95103_4 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000008345 149.0
LYD2_k127_95103_5 Protein of unknown function (DUF2834) - - - 0.000000000000000000000001214 111.0
LYD2_k127_95103_6 - - - - 0.000000007052 63.0
LYD2_k127_953308_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 472.0
LYD2_k127_953308_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 436.0
LYD2_k127_953308_2 Pirin C-terminal cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 368.0
LYD2_k127_953308_4 Domain of unknown function (DUF3516) - - - 0.0000000007394 63.0
LYD2_k127_954751_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.0 1102.0
LYD2_k127_954751_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.00000000000000000000000000000000000000009393 168.0
LYD2_k127_954751_2 efflux transmembrane transporter activity K15725 - - 0.0000000000000000000000001337 118.0
LYD2_k127_962730_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 454.0
LYD2_k127_962730_1 Surface antigen K07277,K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 412.0
LYD2_k127_962730_2 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000000000000000000000000001152 211.0
LYD2_k127_962730_3 - - - - 0.0000000000000000000000000000000000000000005197 174.0
LYD2_k127_962730_4 hyperosmotic response - - - 0.000000000000000003172 96.0
LYD2_k127_962730_5 protein conserved in bacteria K09800 - - 0.00000002218 69.0
LYD2_k127_965251_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 588.0
LYD2_k127_965251_1 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 573.0
LYD2_k127_965251_10 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000006012 168.0
LYD2_k127_965251_12 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000000000009593 111.0
LYD2_k127_965251_13 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.0000000000000000000001755 112.0
LYD2_k127_965251_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 488.0
LYD2_k127_965251_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 446.0
LYD2_k127_965251_4 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 339.0
LYD2_k127_965251_5 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 329.0
LYD2_k127_965251_6 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003502 280.0
LYD2_k127_965251_7 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001061 241.0
LYD2_k127_965251_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000002353 233.0
LYD2_k127_965251_9 Peptidase C26 K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000537 210.0
LYD2_k127_9760_0 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008522 576.0
LYD2_k127_9760_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 538.0
LYD2_k127_9760_10 phosphorelay signal transduction system - - - 0.0006069 52.0
LYD2_k127_9760_3 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 398.0
LYD2_k127_9760_4 Cation efflux family K14696 - - 0.000000000000000000000000000000000000000000000000000000000001185 219.0
LYD2_k127_9760_5 Belongs to the bacterial histone-like protein family K05788 - - 0.0000000000000000000000000000000000000000000000000006348 185.0
LYD2_k127_9760_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000007015 156.0
LYD2_k127_9760_8 Transcriptional regulator, CarD family K07736 - - 0.0000000000000000000000000000000000000001543 167.0
LYD2_k127_9760_9 Gaf domain - - - 0.0000000000000000000000000000000000000007084 173.0
LYD2_k127_98817_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 2.083e-260 830.0
LYD2_k127_98817_1 cellulase activity K01361,K13277,K20276 - 3.4.21.96 4.793e-203 659.0
LYD2_k127_98817_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 410.0
LYD2_k127_98817_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000000001001 192.0
LYD2_k127_98817_4 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000000002059 172.0
LYD2_k127_98817_5 PFAM outer membrane efflux protein K15725 - - 0.000000000000007128 87.0
LYD2_k127_98817_6 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0004999 53.0