logo

Overview

ID MAG02053
Name LYD3_bin.7
Sample SMP0054
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota_A
Class UBA10030
Order UBA10030
Family UBA6906
Genus
Species
Assembly information
Completeness (%) 61.38
Contamination (%) 1.65
GC content (%) 59.0
N50 (bp) 5,059
Genome size (bp) 2,097,912

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1867

Gene name Description KEGG GOs EC E-value Score Sequence
LYD3_k127_104650_0 polyribonucleotide nucleotidyltransferase activity K02945,K03527,K07571,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 483.0
LYD3_k127_104650_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 371.0
LYD3_k127_104650_2 polyribonucleotide nucleotidyltransferase activity K02945,K03527,K07571,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 320.0
LYD3_k127_104650_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 304.0
LYD3_k127_104650_4 Cytidylate kinase K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000009459 217.0
LYD3_k127_104650_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K00556,K03218,K03437 - 2.1.1.185,2.1.1.34 0.0000000000000000000000000000000000000000000000000000000009546 211.0
LYD3_k127_104650_6 - - - - 0.0000000000000000000000000000000000000000000000000001102 194.0
LYD3_k127_1054252_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 305.0
LYD3_k127_1054252_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00970,K00974,K00982,K00990,K06950,K15371 - 1.1.1.3,1.4.1.2,2.7.7.19,2.7.7.42,2.7.7.59,2.7.7.72,2.7.7.89 0.0000000000000000000000000000000000000000000000000007657 193.0
LYD3_k127_1054252_2 peptide deformylase activity K01462 - 3.5.1.88 0.00000000000000000000000000000000000000004771 160.0
LYD3_k127_1058604_0 Aldo Keto reductase K05882 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564 1.1.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 339.0
LYD3_k127_1058604_1 PFAM Alpha amylase, catalytic K01176,K01208 GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070 3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 352.0
LYD3_k127_1058604_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 310.0
LYD3_k127_1058604_3 PFAM glycoside hydrolase family 10 K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000958 265.0
LYD3_k127_1058604_4 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000009406 196.0
LYD3_k127_1058604_5 PFAM FecR protein K20276 - - 0.0000000000000000000315 107.0
LYD3_k127_1085707_0 GTP-binding protein TypA K06207 - - 1.02e-232 731.0
LYD3_k127_1085707_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 440.0
LYD3_k127_1085707_2 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 418.0
LYD3_k127_1085707_3 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 413.0
LYD3_k127_1085707_4 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 367.0
LYD3_k127_1085707_5 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008922 329.0
LYD3_k127_1085707_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000001019 159.0
LYD3_k127_1085707_7 SusE outer membrane protein K01216,K12287 - 3.2.1.73 0.000000007295 58.0
LYD3_k127_1107274_0 TIGRFAM N-terminal double-transmembrane domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007961 296.0
LYD3_k127_1107274_1 - - - - 0.000000000000003721 81.0
LYD3_k127_1108560_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 475.0
LYD3_k127_1108560_1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 426.0
LYD3_k127_1108560_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 415.0
LYD3_k127_1108560_3 Serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000004526 189.0
LYD3_k127_1108560_4 Insulinase (Peptidase family M16) - - - 0.0000000001142 68.0
LYD3_k127_1113629_0 response to copper ion K07156 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002877 278.0
LYD3_k127_1113629_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006356 256.0
LYD3_k127_1196569_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003407 265.0
LYD3_k127_1196569_1 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000001734 233.0
LYD3_k127_1196569_2 import. Responsible for energy coupling to the transport system K10441,K10542 - 3.6.3.17 0.00000000000000000006869 92.0
LYD3_k127_1196569_3 Histidine kinase - - - 0.000000000000008059 83.0
LYD3_k127_1197469_0 Thiamine pyrophosphate enzyme, central domain K03336 - 3.7.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 556.0
LYD3_k127_1197469_1 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 374.0
LYD3_k127_1197469_2 PFAM Myo-inositol catabolism IolB domain protein K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 322.0
LYD3_k127_1197469_3 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000142 179.0
LYD3_k127_1197469_4 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000002572 172.0
LYD3_k127_1209693_0 domain, Protein K21471 - - 0.000000000000000000000000000000000000000000004245 183.0
LYD3_k127_1212063_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 479.0
LYD3_k127_1212063_1 Chase2 domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000002758 246.0
LYD3_k127_1212063_2 FecR protein - - - 0.00000000000000000000000000002443 126.0
LYD3_k127_1212063_3 - - - - 0.0000003631 61.0
LYD3_k127_123872_0 transcription antitermination K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 519.0
LYD3_k127_123872_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 305.0
LYD3_k127_123872_2 ZIP Zinc transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000002559 201.0
LYD3_k127_123872_3 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000002579 184.0
LYD3_k127_123872_4 Binds the 23S rRNA K02909 GO:0008150,GO:0040007 - 0.00000000000000000000000002834 112.0
LYD3_k127_123872_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000001996 60.0
LYD3_k127_1240694_0 peptidase activity, acting on L-amino acid peptides - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 485.0
LYD3_k127_1240694_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000001326 117.0
LYD3_k127_1240694_2 Glucose-6-phosphate dehydrogenase subunit - - - 0.0002688 48.0
LYD3_k127_1247916_0 enterotoxin - - - 0.0000000000000000000000000000000000000000000000000000004711 206.0
LYD3_k127_1247916_1 Uncharacterized protein conserved in bacteria (DUF2334) - - - 0.00000000000000000000000000000000000000002144 167.0
LYD3_k127_1256508_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000005134 239.0
LYD3_k127_1256508_1 CHAT domain - - - 0.0000000000000000000000000000000004865 140.0
LYD3_k127_1256508_2 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.0000000000004449 68.0
LYD3_k127_1256508_3 - - - - 0.000000002519 67.0
LYD3_k127_126755_0 phosphoglycolate phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 299.0
LYD3_k127_126755_1 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005784 270.0
LYD3_k127_126755_2 Permease K06901 - - 0.000006093 48.0
LYD3_k127_127917_0 isocitrate dehydrogenase activity K00031 GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 580.0
LYD3_k127_127917_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000344 212.0
LYD3_k127_127917_2 Histidine kinase K01768,K12132 - 2.7.11.1,4.6.1.1 0.000000000000000000000000000000000000003109 149.0
LYD3_k127_127917_3 bis(5'-adenosyl)-triphosphatase activity K02503 - - 0.0000000000000000000000000000000002467 136.0
LYD3_k127_127917_4 - - - - 0.0000000001133 73.0
LYD3_k127_1298819_0 serine-type peptidase activity K06889,K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 542.0
LYD3_k127_1298819_1 Putative esterase - - - 0.00000000000000001892 83.0
LYD3_k127_1302598_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 308.0
LYD3_k127_1302598_1 - - - - 0.0000000000000000000000000000000000000005272 153.0
LYD3_k127_132391_0 N-Acetylmuramoyl-L-alanine amidase - - - 2.034e-212 676.0
LYD3_k127_1349949_0 FtsZ-dependent cytokinesis - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000008376 168.0
LYD3_k127_1349949_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000001524 163.0
LYD3_k127_1349949_2 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000000000000000000000000002753 139.0
LYD3_k127_1361450_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 380.0
LYD3_k127_1361450_1 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000205 177.0
LYD3_k127_1361450_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000007056 139.0
LYD3_k127_1361450_3 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000006888 146.0
LYD3_k127_1361450_4 - - - - 0.00000000000000001649 88.0
LYD3_k127_1370521_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 374.0
LYD3_k127_1370521_1 Pfam:DUF59 K02612 - - 0.000000000000000000000000001305 117.0
LYD3_k127_1387751_0 Amino acid permease - - - 8.419e-213 677.0
LYD3_k127_1387751_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 504.0
LYD3_k127_1387751_2 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000002071 271.0
LYD3_k127_1387751_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004636 250.0
LYD3_k127_1387751_4 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000001753 209.0
LYD3_k127_1387751_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000693 183.0
LYD3_k127_1388846_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000001565 248.0
LYD3_k127_1388846_1 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000003817 117.0
LYD3_k127_1388846_2 B12 binding domain - - - 0.00000000000000000006586 100.0
LYD3_k127_1408903_0 pyruvate dehydrogenase (acetyl-transferring) activity K00163 - 1.2.4.1 9.787e-271 842.0
LYD3_k127_1427604_0 DNA-directed DNA polymerase activity K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1190.0
LYD3_k127_1427604_1 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 300.0
LYD3_k127_1427604_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 304.0
LYD3_k127_1427604_3 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000005283 224.0
LYD3_k127_1427604_4 belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000001639 164.0
LYD3_k127_1427604_5 Metallophosphoesterase, calcineurin superfamily K07096 - - 0.00000000000000000000000000000000000000004742 162.0
LYD3_k127_1427604_6 Outer membrane protein beta-barrel domain K07275 - - 0.0004406 49.0
LYD3_k127_142831_0 - - - - 0.000000000000000000000000000000000000000000000000000000009791 224.0
LYD3_k127_142831_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000000000000000000002607 104.0
LYD3_k127_142831_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000008711 66.0
LYD3_k127_143174_0 aconitate hydratase activity K01681 - 4.2.1.3 0.0 1075.0
LYD3_k127_143174_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.683e-203 641.0
LYD3_k127_143174_2 PFAM ATP-dependent Clp protease adaptor protein ClpS - - - 0.00000000000000000000008787 106.0
LYD3_k127_1444983_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 8.027e-199 632.0
LYD3_k127_1444983_1 PFAM Isocitrate isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 447.0
LYD3_k127_1444983_2 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 438.0
LYD3_k127_1444983_3 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 361.0
LYD3_k127_1444983_4 Methyltransferase domain - - - 0.000000000000000000000000000006686 127.0
LYD3_k127_147878_0 PFAM uncharacterised conserved protein UCP033563 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 357.0
LYD3_k127_147878_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000001989 247.0
LYD3_k127_147878_2 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000002423 177.0
LYD3_k127_147878_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000109 175.0
LYD3_k127_147878_4 DNA-binding helix-turn-helix protein K01356 - 3.4.21.88 0.000000000000000000007002 100.0
LYD3_k127_1489026_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000006823 203.0
LYD3_k127_1489026_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000001793 191.0
LYD3_k127_1494186_0 Glycogen debranching enzyme K18206 - 3.2.1.187 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 484.0
LYD3_k127_1494186_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009284 269.0
LYD3_k127_1507685_0 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 415.0
LYD3_k127_1507685_1 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 376.0
LYD3_k127_1507685_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000001708 132.0
LYD3_k127_1524886_0 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 552.0
LYD3_k127_1524886_1 PFAM beta-lactamase domain protein K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 500.0
LYD3_k127_1524886_10 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000008382 118.0
LYD3_k127_1524886_11 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.0000000000000000000000000001428 118.0
LYD3_k127_1524886_12 - - - - 0.000000000000000000000000001607 119.0
LYD3_k127_1524886_13 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.00000000000000000000000002188 113.0
LYD3_k127_1524886_2 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 445.0
LYD3_k127_1524886_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 428.0
LYD3_k127_1524886_4 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002399 282.0
LYD3_k127_1524886_5 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000002439 222.0
LYD3_k127_1524886_6 - - - - 0.000000000000000000000000000000000000000000000000000139 209.0
LYD3_k127_1524886_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000001898 173.0
LYD3_k127_1524886_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000002676 169.0
LYD3_k127_1524886_9 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000156 133.0
LYD3_k127_153189_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000000000003762 130.0
LYD3_k127_153189_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000003129 113.0
LYD3_k127_1532095_0 glutamine synthetase K01915 - 6.3.1.2 2.653e-251 783.0
LYD3_k127_1532095_1 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 479.0
LYD3_k127_1532095_2 Ribulose-phosphate 3 epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007953 280.0
LYD3_k127_1532095_3 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000002523 252.0
LYD3_k127_1532095_4 purine ribonucleoside salvage K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000009948 224.0
LYD3_k127_1532095_5 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000000249 181.0
LYD3_k127_1532095_6 serine threonine protein kinase K01921,K03587,K08884,K12132 - 2.7.11.1,3.4.16.4,6.3.2.4 0.000000000000000000000000000001046 131.0
LYD3_k127_1532095_7 Redoxin K03564 - 1.11.1.15 0.000000000000000000000001416 107.0
LYD3_k127_1539191_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.943e-268 846.0
LYD3_k127_1539191_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 454.0
LYD3_k127_1539191_10 Belongs to the Smg family K03747 - - 0.000000000000000006177 90.0
LYD3_k127_1539191_2 Phage integrase, N-terminal SAM-like domain K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 292.0
LYD3_k127_1539191_3 heme binding K21471 - - 0.000000000000000000000000000000000000000000000000000000004464 211.0
LYD3_k127_1539191_4 - - - - 0.000000000000000000000000000000000000000000947 165.0
LYD3_k127_1539191_5 membrane organization K07277 - - 0.0000000000000000000000000000000000000001194 171.0
LYD3_k127_1539191_6 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000003824 131.0
LYD3_k127_1539191_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000000000000000000005259 111.0
LYD3_k127_1539191_8 regulation of translation K03733,K05808,K05809 - - 0.0000000000000000007642 90.0
LYD3_k127_1539191_9 Beta-lactamase superfamily domain - - - 0.000000000000000001291 89.0
LYD3_k127_1548135_0 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000007116 225.0
LYD3_k127_1548135_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000006695 161.0
LYD3_k127_1548135_2 Heptosyltransferase II K02843 - - 0.00000004946 55.0
LYD3_k127_1609765_0 Glycosyl transferase, family 2 K12984 - - 0.00000000000000000000000000000000000000000000000000000000002088 210.0
LYD3_k127_1609765_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000008997 215.0
LYD3_k127_1609765_2 Cytochrome c - - - 0.000000000000000008983 88.0
LYD3_k127_1609765_3 Domain of unknown function (DUF1844) - - - 0.000000000008609 72.0
LYD3_k127_1609765_4 Protein of unknown function (DUF4013) - - - 0.000000003013 66.0
LYD3_k127_1611920_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 574.0
LYD3_k127_1611920_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 348.0
LYD3_k127_1613870_0 translation release factor activity K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 452.0
LYD3_k127_1613870_1 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000004779 129.0
LYD3_k127_1613870_2 Lamin Tail Domain - - - 0.0000000000000000000002049 107.0
LYD3_k127_1616276_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 381.0
LYD3_k127_1616276_1 - - - - 0.0000000000000000000000000000000008357 137.0
LYD3_k127_1616276_2 DNA polymerase K02347 - - 0.000000000000000000000000000000001709 133.0
LYD3_k127_1640849_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 3.091e-236 744.0
LYD3_k127_1640849_1 NAD binding K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 557.0
LYD3_k127_1640849_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 524.0
LYD3_k127_1640849_3 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 389.0
LYD3_k127_1640849_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 355.0
LYD3_k127_1640849_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001157 265.0
LYD3_k127_1640849_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000003528 184.0
LYD3_k127_1640849_7 Highly conserved protein containing a thioredoxin domain K18581 - 3.2.1.180 0.0000000000000000000000000000000000000000002247 164.0
LYD3_k127_1640849_8 NADH-quinone oxidoreductase K00334 - 1.6.5.3 0.000000000000000000000000000000000000000009097 159.0
LYD3_k127_1640849_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000616 134.0
LYD3_k127_1650029_0 Peptidase family M49 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 578.0
LYD3_k127_1650029_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 346.0
LYD3_k127_1650029_2 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000009872 151.0
LYD3_k127_1653578_0 Glycosyl hydrolase family 57 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001195 275.0
LYD3_k127_1653578_1 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000001982 74.0
LYD3_k127_1653578_2 response to heat - - - 0.000001224 55.0
LYD3_k127_1654846_0 Prokaryotic cytochrome b561 - - - 3.329e-235 742.0
LYD3_k127_1654846_1 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 432.0
LYD3_k127_1674200_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 331.0
LYD3_k127_1687965_0 Peptidase family M28 K05994 - 3.4.11.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 507.0
LYD3_k127_1687965_1 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001015 297.0
LYD3_k127_1687965_2 Ser-tRNA(Ala) hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000001018 209.0
LYD3_k127_169811_0 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004072 259.0
LYD3_k127_169811_1 peptide catabolic process - - - 0.00000000000000000000000000000000000000000000000008611 188.0
LYD3_k127_169811_2 GYD domain - - - 0.000000000000000000000000000000000001148 141.0
LYD3_k127_169811_3 GHKL domain - - - 0.000000000002524 70.0
LYD3_k127_1703658_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 1.973e-287 900.0
LYD3_k127_1703658_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 5.714e-241 759.0
LYD3_k127_1719054_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001973 280.0
LYD3_k127_1719054_1 Cell division ATP-binding protein ftsE K09812 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000006148 252.0
LYD3_k127_1719054_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.0000000000000000000000000000000000000000000000000000001002 198.0
LYD3_k127_1719054_3 Peptidase M56 - - - 0.0000000000000000000000000000000000001265 160.0
LYD3_k127_1719581_0 GTPase activity K03596 - - 5.409e-236 737.0
LYD3_k127_1719581_1 signal peptide processing K03100 - 3.4.21.89 0.000000000000000000000000000000001826 135.0
LYD3_k127_1736134_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 1.711e-281 874.0
LYD3_k127_1736134_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 1.417e-261 824.0
LYD3_k127_1736134_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 482.0
LYD3_k127_1736134_3 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 383.0
LYD3_k127_1736134_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000002816 191.0
LYD3_k127_1736134_5 cellulose binding - - - 0.000000000000000000000000004318 127.0
LYD3_k127_1737761_0 Belongs to the aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 2.11e-209 662.0
LYD3_k127_1737761_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821,K03918,K07250,K13524 - 2.6.1.11,2.6.1.17,2.6.1.19,2.6.1.22,2.6.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 532.0
LYD3_k127_1737761_2 PFAM Alpha amylase, catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 483.0
LYD3_k127_1737761_3 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 432.0
LYD3_k127_1737761_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 331.0
LYD3_k127_1737761_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000002042 255.0
LYD3_k127_1737761_6 protein refolding K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016465,GO:0018995,GO:0020003,GO:0023051,GO:0023056,GO:0030430,GO:0032991,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051082,GO:0061077,GO:0065007,GO:0065010,GO:0101031,GO:1901222,GO:1901224,GO:1902531,GO:1902533,GO:1990220,GO:2000535 - 0.00000000000000000000000000000000000000000000000000000000000000004487 224.0
LYD3_k127_1737761_7 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000009262 162.0
LYD3_k127_1737761_8 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000009242 158.0
LYD3_k127_1741543_0 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002044 284.0
LYD3_k127_1741543_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002191 281.0
LYD3_k127_1741543_2 PFAM Rhomboid family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006068 232.0
LYD3_k127_1754043_0 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000001159 259.0
LYD3_k127_1754043_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000165 166.0
LYD3_k127_1754043_2 Fatty acid hydroxylase superfamily K15746 - 1.14.15.24 0.00000000000000000000000000001896 125.0
LYD3_k127_1791388_0 competence protein COMEC K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 331.0
LYD3_k127_1797292_0 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 441.0
LYD3_k127_1797292_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 325.0
LYD3_k127_1797292_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000003007 156.0
LYD3_k127_1797292_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000002267 149.0
LYD3_k127_1797292_4 cysteine-type peptidase activity K13694,K13695 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.4.17.13 0.00000000000000000000000000226 121.0
LYD3_k127_1797292_5 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000002585 114.0
LYD3_k127_1826010_0 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 2.836e-249 792.0
LYD3_k127_1826010_1 beta-galactosidase activity K01190,K12308 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002554 284.0
LYD3_k127_1849915_0 glucan 1,4-alpha-glucosidase activity K01178 - 3.2.1.3 4.608e-234 749.0
LYD3_k127_1849915_1 beta-galactosidase activity K01190,K12308 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 515.0
LYD3_k127_1858851_0 lipoprotein localization to outer membrane K09808,K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 312.0
LYD3_k127_1858851_1 lipoprotein localization to outer membrane K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000322 295.0
LYD3_k127_1858851_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001163 276.0
LYD3_k127_1858851_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000002474 122.0
LYD3_k127_1858851_4 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000002098 110.0
LYD3_k127_1872408_0 transferase activity, transferring glycosyl groups K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 507.0
LYD3_k127_1872408_1 Domain of unknown function (DUF1949) - - - 0.000000000000000000000000000000000000005279 153.0
LYD3_k127_1872408_2 AraC-like ligand binding domain - - - 0.00000000001238 70.0
LYD3_k127_1872408_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000001355 68.0
LYD3_k127_1901242_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 574.0
LYD3_k127_1901242_1 porphobilinogen synthase activity K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 476.0
LYD3_k127_1901242_2 Flavin containing amine oxidoreductase K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 396.0
LYD3_k127_1901242_3 Pilus assembly protein PilX K02673 - - 0.0000000001615 65.0
LYD3_k127_1937165_0 peptidase activity, acting on L-amino acid peptides K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 608.0
LYD3_k127_1937165_1 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000009776 194.0
LYD3_k127_1950441_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 6.118e-240 773.0
LYD3_k127_1950441_1 Alpha amylase, catalytic domain K00705,K01176,K01187,K01208,K05341,K21575 - 2.4.1.25,2.4.1.4,3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.20,3.2.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 618.0
LYD3_k127_1950441_2 peptidyl-prolyl cis-trans isomerase activity K03769,K03771,K07533 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000003899 264.0
LYD3_k127_1950441_3 - - - - 0.0007807 45.0
LYD3_k127_1957152_0 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 415.0
LYD3_k127_1957152_1 iron-nicotianamine transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 383.0
LYD3_k127_1957152_2 Chitobiase/beta-hexosaminidase C-terminal domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000009371 271.0
LYD3_k127_1969234_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000005725 181.0
LYD3_k127_1969234_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000002011 75.0
LYD3_k127_1972049_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 385.0
LYD3_k127_1972049_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003683 265.0
LYD3_k127_1974275_0 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000002485 231.0
LYD3_k127_1974275_1 Receptor family ligand binding region - - - 0.0000000000000000000000000001665 130.0
LYD3_k127_1974275_2 positive regulation of growth rate - - - 0.000000000000000000000000001081 123.0
LYD3_k127_1979210_0 lipopolysaccharide transport - - - 3.407e-196 642.0
LYD3_k127_1979210_1 PFAM AAA ATPase central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 503.0
LYD3_k127_1979210_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000006114 198.0
LYD3_k127_1979210_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.0000009923 55.0
LYD3_k127_1984769_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 297.0
LYD3_k127_1984769_1 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000372 258.0
LYD3_k127_1984769_2 Two component transcriptional regulator, winged helix family K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000006124 236.0
LYD3_k127_1984769_3 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000003317 188.0
LYD3_k127_2004501_0 PFAM ABC transporter transmembrane K06147 - - 1.324e-272 850.0
LYD3_k127_2004501_1 Protein of unknown function, DUF255 K06888 - - 3.12e-226 721.0
LYD3_k127_2004501_2 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.000000000000000003481 92.0
LYD3_k127_2004501_3 - - - - 0.00000000000000005728 85.0
LYD3_k127_2027445_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 404.0
LYD3_k127_2027445_1 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.0000000000000000000000000000000000001427 148.0
LYD3_k127_2048867_0 Immune inhibitor A peptidase M6 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001059 267.0
LYD3_k127_2048867_1 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000001341 211.0
LYD3_k127_2049013_0 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 304.0
LYD3_k127_2049013_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000003937 194.0
LYD3_k127_2049013_2 fimbrial usher porin activity - - - 0.0000000000004474 72.0
LYD3_k127_2090384_0 PFAM YicC domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002118 273.0
LYD3_k127_2090384_1 guanylate kinase activity K00942,K01591 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8,4.1.1.23 0.00000000000000000000000000000000000000000000006302 176.0
LYD3_k127_2090384_2 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.00000001561 61.0
LYD3_k127_2096769_0 COG2801 Transposase and inactivated derivatives K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001175 271.0
LYD3_k127_2096769_1 Transposase K07483 - - 0.000000000000000000000001995 117.0
LYD3_k127_2096769_2 DNA integration - - - 0.00000108 53.0
LYD3_k127_2124841_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 5.615e-204 657.0
LYD3_k127_2124841_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 315.0
LYD3_k127_2124841_2 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000004126 244.0
LYD3_k127_2124841_3 bis(5'-adenosyl)-triphosphatase activity K19710 GO:0003674,GO:0003824,GO:0003877,GO:0004551,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008796,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009987,GO:0015959,GO:0015961,GO:0015965,GO:0015967,GO:0016020,GO:0016462,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070566,GO:0071704,GO:0071944,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.7.53 0.000000000000000000000000000000000000000000000000002806 192.0
LYD3_k127_2124841_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000786 168.0
LYD3_k127_2124841_5 regulation of translation K03530,K05788 - - 0.000000000000000000000000000000004431 130.0
LYD3_k127_2124841_6 gas vesicle protein - - - 0.000000000000000000000000000000007266 132.0
LYD3_k127_2124841_8 peptidyl-tyrosine sulfation - - - 0.00009331 53.0
LYD3_k127_2145183_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 2.76e-278 881.0
LYD3_k127_2145183_1 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 8.64e-207 662.0
LYD3_k127_2145183_2 cAMP biosynthetic process K00870,K12132 - 2.7.1.37,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 351.0
LYD3_k127_2145183_3 purine nucleobase transmembrane transporter activity K06901 - - 0.00000000000000000000000000000000000000000000000002328 182.0
LYD3_k127_2145326_0 Glyco_18 K01448,K07260,K20276 - 3.4.17.14,3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008981 304.0
LYD3_k127_2145326_1 Negative regulator of - - - 0.000000000000000000000000000000000000000000000000000000000000000008845 254.0
LYD3_k127_2145326_2 N-Acetylmuramoyl-L-alanine amidase K01176,K01448 GO:0003674,GO:0005198,GO:0005199,GO:0005575,GO:0005623,GO:0008150,GO:0009273,GO:0009987,GO:0030115,GO:0030312,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071840,GO:0071944 3.2.1.1,3.5.1.28 0.0000000000000000000000000000006414 142.0
LYD3_k127_2165193_0 PFAM glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000005609 218.0
LYD3_k127_2165193_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000000000000000000000000003906 189.0
LYD3_k127_2165193_2 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000002924 126.0
LYD3_k127_2172265_0 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 563.0
LYD3_k127_2172265_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0001064 52.0
LYD3_k127_2176008_0 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 524.0
LYD3_k127_2176008_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 403.0
LYD3_k127_2176008_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000009084 122.0
LYD3_k127_2176008_3 histidine kinase DNA gyrase B - - - 0.000000000000000002989 89.0
LYD3_k127_217721_0 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 1.565e-199 631.0
LYD3_k127_217721_1 Aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 524.0
LYD3_k127_217721_2 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000006932 166.0
LYD3_k127_2180849_0 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 413.0
LYD3_k127_2180849_1 protein (some members contain a von Willebrand factor type A (vWA) domain - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 372.0
LYD3_k127_2180849_2 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 353.0
LYD3_k127_2180849_3 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000007741 183.0
LYD3_k127_2180849_4 cytochrome complex assembly K02198,K02200,K04016,K04017,K04018 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - 0.0000000000000000000000000000000000000000000003979 179.0
LYD3_k127_2180849_5 protein trimerization - - - 0.0000000000000000000000000000000000002183 151.0
LYD3_k127_2184767_0 Sigma-54 interaction domain K11384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 497.0
LYD3_k127_2184767_1 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 414.0
LYD3_k127_2184767_10 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000004871 92.0
LYD3_k127_2184767_11 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000002698 65.0
LYD3_k127_2184767_2 alpha amylase, catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 385.0
LYD3_k127_2184767_3 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 336.0
LYD3_k127_2184767_4 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000186 237.0
LYD3_k127_2184767_5 Membrane - - - 0.00000000000000000000000000000000000000000000001044 186.0
LYD3_k127_2184767_6 Flavin containing amine oxidoreductase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000003611 164.0
LYD3_k127_2184767_7 PFAM Biopolymer transport protein ExbD TolR - - - 0.0000000000000000000000000000000000009834 144.0
LYD3_k127_2184767_8 Outer membrane transport energization protein ExbD - - - 0.000000000000000000000000000000000001629 143.0
LYD3_k127_2184767_9 antisigma factor binding K04749 - - 0.00000000000000000007748 95.0
LYD3_k127_2190716_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004917 572.0
LYD3_k127_2190716_1 Histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 406.0
LYD3_k127_2190716_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000004163 179.0
LYD3_k127_2190716_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000003703 128.0
LYD3_k127_2224900_0 8-amino-7-oxononanoate synthase activity K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 585.0
LYD3_k127_2224900_1 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 350.0
LYD3_k127_2224900_2 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 326.0
LYD3_k127_2251768_0 Asparagine synthase K01953 - 6.3.5.4 5.394e-239 758.0
LYD3_k127_2251768_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 392.0
LYD3_k127_2251768_2 Phosphopantetheine attachment site - - - 0.0000000001891 63.0
LYD3_k127_2264615_0 Belongs to the glycosyl hydrolase 31 family - - - 4.813e-232 755.0
LYD3_k127_2264615_1 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 473.0
LYD3_k127_2264615_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 426.0
LYD3_k127_2264615_3 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 375.0
LYD3_k127_2264615_4 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 322.0
LYD3_k127_2264615_5 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000003923 121.0
LYD3_k127_2264615_6 - - - - 0.00004968 51.0
LYD3_k127_2270672_0 PFAM alpha amylase, catalytic region - - - 1.741e-195 625.0
LYD3_k127_2270672_1 Glycosyl hydrolase family 57 - - - 0.0000000000000000000000000000000000000000000000000000563 202.0
LYD3_k127_2271440_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 399.0
LYD3_k127_2271440_1 response to abiotic stimulus - - - 0.00000000000000000000000000000000000000003474 162.0
LYD3_k127_2271440_2 photosystem II stabilization - - - 0.0000000000000000000000000000000000004393 151.0
LYD3_k127_2271440_3 Helix-hairpin-helix motif - - - 0.0000000000000000000000009867 121.0
LYD3_k127_2271440_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000005082 83.0
LYD3_k127_2271440_5 - - - - 0.00003613 50.0
LYD3_k127_2310158_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 466.0
LYD3_k127_2310158_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006082,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0070566,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000001922 194.0
LYD3_k127_2310158_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K02652,K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0017076,GO:0030234,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0044464,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071496,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000006991 154.0
LYD3_k127_2310158_3 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000000000000424 156.0
LYD3_k127_2310158_4 Putative regulatory protein - - - 0.000000000000000000009818 94.0
LYD3_k127_2310158_5 Helix-hairpin-helix motif K02237 - - 0.000000000000000008566 88.0
LYD3_k127_2310158_6 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000003918 62.0
LYD3_k127_2312126_0 PFAM NAD-dependent epimerase dehydratase K01709 - 4.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 424.0
LYD3_k127_2312126_1 Nucleotidyl transferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 330.0
LYD3_k127_2312126_2 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 0.00000002273 56.0
LYD3_k127_232072_0 Chalcone and stilbene synthases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001503 244.0
LYD3_k127_232072_1 Methyltransferase - - - 0.000000000000000000000000000000000000000004641 164.0
LYD3_k127_232072_2 FAD binding domain - - - 0.000000000000000000000000000000000006933 153.0
LYD3_k127_2325751_0 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 452.0
LYD3_k127_2325751_1 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001703 234.0
LYD3_k127_2325751_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000003315 124.0
LYD3_k127_2331734_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K15022,K18331 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0044237,GO:0044424,GO:0044464,GO:0045333,GO:0055114,GO:0071944 1.12.1.3,1.17.1.10,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 382.0
LYD3_k127_2331734_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000001097 170.0
LYD3_k127_2342407_0 alpha-galactosidase K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000003035 220.0
LYD3_k127_2342407_1 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000004661 196.0
LYD3_k127_2342407_2 self proteolysis K07019 - - 0.000000000000000000000009441 118.0
LYD3_k127_2342407_3 cellulase activity - - - 0.000000000000006216 79.0
LYD3_k127_2343023_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 596.0
LYD3_k127_2343023_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000009722 98.0
LYD3_k127_2358336_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 300.0
LYD3_k127_2358336_1 TIGRFAM MazG family protein K02428,K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66,3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001817 267.0
LYD3_k127_2358336_2 phosphate starvation-inducible protein PhoH K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000001087 224.0
LYD3_k127_2362650_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 442.0
LYD3_k127_2362650_1 (ABC) transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000008912 161.0
LYD3_k127_2362650_2 Outer membrane lipoprotein - - - 0.000000000000000004398 93.0
LYD3_k127_2386299_0 bacterial-type flagellum-dependent cell motility - - - 8.413e-252 827.0
LYD3_k127_2386299_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 3.221e-198 628.0
LYD3_k127_2386299_2 glycine hydroxymethyltransferase activity K00600 GO:0001505,GO:0003674,GO:0003824,GO:0004372,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006546,GO:0006563,GO:0006565,GO:0006730,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0016742,GO:0017144,GO:0019264,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042133,GO:0042135,GO:0042136,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.2.1 2.115e-195 617.0
LYD3_k127_2386299_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009168 453.0
LYD3_k127_2386299_4 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 409.0
LYD3_k127_2386299_5 isoprenoid biosynthetic process K00805,K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.30,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 378.0
LYD3_k127_2386299_6 protein transport K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 310.0
LYD3_k127_2386299_7 Polynucleotide kinase 3 phosphatase - - - 0.000000000000000000000000000000000000000000000000001357 190.0
LYD3_k127_2386299_8 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000002179 177.0
LYD3_k127_2386299_9 PFAM Uncharacterised protein family (UPF0164) - - - 0.0000004594 62.0
LYD3_k127_2409082_0 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 410.0
LYD3_k127_2409082_1 e3 binding domain K00658,K09699 - 2.3.1.168,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 381.0
LYD3_k127_2409082_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000003771 183.0
LYD3_k127_2409082_3 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000003848 135.0
LYD3_k127_2411932_0 radical SAM domain protein - - - 8.272e-213 672.0
LYD3_k127_2420691_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 336.0
LYD3_k127_2420691_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006289 275.0
LYD3_k127_2420691_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000003606 216.0
LYD3_k127_2420691_3 mRNA binding K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000002693 191.0
LYD3_k127_2420691_4 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000001451 159.0
LYD3_k127_2420691_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000009673 137.0
LYD3_k127_2422237_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 302.0
LYD3_k127_2422237_1 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 301.0
LYD3_k127_2422237_2 cAMP biosynthetic process K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 299.0
LYD3_k127_2422237_3 Carbonic anhydrase K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001905 257.0
LYD3_k127_2422237_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
LYD3_k127_2422237_5 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.00000008421 55.0
LYD3_k127_2446364_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 385.0
LYD3_k127_2446364_1 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000003287 220.0
LYD3_k127_2446364_2 Chase2 domain - - - 0.0000000000000000001131 101.0
LYD3_k127_2451400_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000101 193.0
LYD3_k127_2451400_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000007078 144.0
LYD3_k127_2451400_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000001352 102.0
LYD3_k127_2471203_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 3.01e-233 747.0
LYD3_k127_2471203_1 peptidoglycan glycosyltransferase activity K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 314.0
LYD3_k127_2471203_2 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008368 280.0
LYD3_k127_249539_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001118 262.0
LYD3_k127_249539_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000608 130.0
LYD3_k127_251133_0 TonB-dependent receptor - - - 0.0 1047.0
LYD3_k127_251133_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009511 252.0
LYD3_k127_251133_2 nucleotide catabolic process K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000002725 193.0
LYD3_k127_2553098_0 3-isopropylmalate dehydratase activity K01703 - 4.2.1.33,4.2.1.35 1.303e-218 684.0
LYD3_k127_2553098_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 604.0
LYD3_k127_2553098_2 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 360.0
LYD3_k127_2553098_3 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 284.0
LYD3_k127_2553098_4 3-isopropylmalate dehydratase activity K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000192 216.0
LYD3_k127_2553098_5 coproporphyrinogen oxidase activity K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.00000000000000000000000000000000000000000000001535 173.0
LYD3_k127_2553098_6 response to oxidative stress K04063 - - 0.0000000000000000000000000000000515 130.0
LYD3_k127_2562438_0 IMP dehydrogenase activity K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 2.46e-225 706.0
LYD3_k127_2562438_1 acyl-CoA dehydrogenase activity K00252 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 585.0
LYD3_k127_2562438_2 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 444.0
LYD3_k127_2562438_3 phosphorelay signal transduction system K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 428.0
LYD3_k127_2562438_4 acyl-CoA dehydrogenase activity K00248,K11410,K18244 GO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0004085,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016491,GO:0016627,GO:0017076,GO:0019395,GO:0019605,GO:0019626,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033218,GO:0033539,GO:0033993,GO:0034440,GO:0036094,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046359,GO:0046395,GO:0046459,GO:0048037,GO:0048545,GO:0050660,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051384,GO:0052890,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901681 1.3.8.1,1.3.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 405.0
LYD3_k127_2562438_5 UDP-glucose 4-epimerase activity K01784,K17947 - 5.1.3.2,5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 393.0
LYD3_k127_2562438_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 371.0
LYD3_k127_2562438_7 isobutyryl-CoA mutase activity K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 336.0
LYD3_k127_2562438_8 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 304.0
LYD3_k127_2562438_9 phosphorelay signal transduction system - - - 0.000000000000000000000000001689 115.0
LYD3_k127_2572557_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 2.924e-319 992.0
LYD3_k127_2572557_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 340.0
LYD3_k127_2572557_10 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000004261 173.0
LYD3_k127_2572557_11 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000024 154.0
LYD3_k127_2572557_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 321.0
LYD3_k127_2572557_3 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 304.0
LYD3_k127_2572557_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 304.0
LYD3_k127_2572557_5 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000517 293.0
LYD3_k127_2572557_6 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.000000000000000000000000000000000000000000000000000000000000000004811 241.0
LYD3_k127_2572557_7 Aminoacyl-tRNA editing domain K03976 - - 0.0000000000000000000000000000000000000000000000000000003816 198.0
LYD3_k127_2572557_8 ApaG domain K06195 - - 0.000000000000000000000000000000000000000000002176 168.0
LYD3_k127_2572557_9 Protein conserved in bacteria K09922 - - 0.000000000000000000000000000000000000000000006443 170.0
LYD3_k127_258411_0 cytokinin biosynthetic process K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 320.0
LYD3_k127_258411_1 Diaminopimelate epimerase K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000002938 104.0
LYD3_k127_258411_2 Psort location Cytoplasmic, score - - - 0.00003333 55.0
LYD3_k127_2585927_0 Acetyl-CoA hydrolase/transferase N-terminal domain K01067 - 3.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 555.0
LYD3_k127_2585927_1 cystathionine gamma-synthase activity K01758,K01760,K01761 - 4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 531.0
LYD3_k127_2585927_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 486.0
LYD3_k127_2585927_3 Cytochrome C-type biogenesis protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 481.0
LYD3_k127_2585927_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 395.0
LYD3_k127_2585927_5 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00177,K00187 - 1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000001061 258.0
LYD3_k127_2585927_6 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000006447 226.0
LYD3_k127_2585927_7 4 iron, 4 sulfur cluster binding K00176 - 1.2.7.3 0.00000000000000000000000000001301 121.0
LYD3_k127_2585927_8 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000001069 61.0
LYD3_k127_2585927_9 Ferritin-like domain - - - 0.00006946 49.0
LYD3_k127_2589458_0 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 315.0
LYD3_k127_2589458_1 peroxiredoxin activity K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000939 196.0
LYD3_k127_2589458_2 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000006478 154.0
LYD3_k127_2633695_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 416.0
LYD3_k127_2633695_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 336.0
LYD3_k127_2633695_2 Bifunctional 3-dehydroquinate dehydratase shikimate dehydrogenase K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 333.0
LYD3_k127_2633695_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002551 281.0
LYD3_k127_2633695_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000299 210.0
LYD3_k127_2633695_5 Prephenate dehydrogenase K00210 - 1.3.1.12 0.00000000000000000000000000000000000003798 153.0
LYD3_k127_2633695_6 - - - - 0.00000000000000000000000007357 109.0
LYD3_k127_2638966_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 461.0
LYD3_k127_2638966_1 peptidyl-prolyl cis-trans isomerase activity K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 402.0
LYD3_k127_2638966_2 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 373.0
LYD3_k127_2638966_3 DNA topoisomerase II activity K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000007475 178.0
LYD3_k127_2638966_4 Peptidylprolyl isomerase K01802,K03769 - 5.2.1.8 0.0003533 51.0
LYD3_k127_2665785_0 TIGRFAM aminoacyl-histidine dipeptidase K01270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 580.0
LYD3_k127_2665785_1 iron-nicotianamine transmembrane transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 516.0
LYD3_k127_2665785_2 iron-nicotianamine transmembrane transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 512.0
LYD3_k127_2665785_3 proline dehydrogenase activity K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 307.0
LYD3_k127_2665785_4 Nucleoside recognition K06373,K06374 - - 0.000000000000000000000000000000000000000000000000000000000000000000001472 239.0
LYD3_k127_2665785_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000002615 207.0
LYD3_k127_2665785_6 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000002644 76.0
LYD3_k127_2672239_0 Aldo/keto reductase family K16950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 436.0
LYD3_k127_2672239_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000001227 246.0
LYD3_k127_2672239_2 Ferredoxin - - - 0.00000000000000000000000000000000000008784 147.0
LYD3_k127_2672239_3 Flavin containing amine oxidoreductase K09516,K09835 - 1.3.99.23,5.2.1.13 0.000000002913 62.0
LYD3_k127_2672239_4 membrane protein (DUF2154) - - - 0.0005907 48.0
LYD3_k127_2678937_0 TonB-dependent receptor - - - 0.0 1252.0
LYD3_k127_2678937_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 600.0
LYD3_k127_268241_0 membrane organization K03641,K07277 - - 9.676e-212 681.0
LYD3_k127_2688825_0 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 368.0
LYD3_k127_2688825_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006201 278.0
LYD3_k127_2700371_0 arginine biosynthetic process via ornithine K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 458.0
LYD3_k127_2700371_1 membrane protein, TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 334.0
LYD3_k127_2707310_0 nucleotide-excision repair K03702,K08999 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 8.476e-297 929.0
LYD3_k127_2707310_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 1.342e-228 740.0
LYD3_k127_2707310_10 N-acetylglucosamine kinase activity K00884 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 2.7.1.59 0.000000000000000000000000000000000009273 148.0
LYD3_k127_2707310_11 ComF family K00764 - 2.4.2.14 0.0000000000000000000000000000001926 132.0
LYD3_k127_2707310_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000007137 96.0
LYD3_k127_2707310_13 - - - - 0.0000000000006799 79.0
LYD3_k127_2707310_14 Uncharacterized conserved protein (DUF2203) - - - 0.000001405 55.0
LYD3_k127_2707310_2 PFAM Aldehyde dehydrogenase K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 565.0
LYD3_k127_2707310_3 phosphoglycerate kinase activity K00927,K01803 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 519.0
LYD3_k127_2707310_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 467.0
LYD3_k127_2707310_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 441.0
LYD3_k127_2707310_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 344.0
LYD3_k127_2707310_7 PFAM metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 294.0
LYD3_k127_2707310_8 proteolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000105 258.0
LYD3_k127_2707310_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000009157 169.0
LYD3_k127_2709496_0 membrane organization K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 622.0
LYD3_k127_2709496_1 amine dehydrogenase activity - - - 0.0000000000000000000000156 108.0
LYD3_k127_2760850_0 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 497.0
LYD3_k127_2760850_1 Trehalase K03931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 388.0
LYD3_k127_2760850_2 Beta-L-arabinofuranosidase, GH127 - - - 0.000000000000000000000000000000000000000000001909 171.0
LYD3_k127_276923_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 366.0
LYD3_k127_276923_1 Asparaginase, N-terminal K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001465 237.0
LYD3_k127_2772594_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 380.0
LYD3_k127_2772594_1 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000000000007824 261.0
LYD3_k127_2772594_2 cobalamin-transporting ATPase activity K02014 - - 0.0000000000000000000000000000000000000000000000000000001237 220.0
LYD3_k127_2772594_3 DinB family - - - 0.0000000000000000000000000000000000000003228 154.0
LYD3_k127_2772594_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000003086 136.0
LYD3_k127_2772594_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000003706 130.0
LYD3_k127_2772594_6 cytokinin biosynthetic process K06966 - 3.2.2.10 0.000000000000000000000000000003639 126.0
LYD3_k127_278093_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 468.0
LYD3_k127_278093_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 365.0
LYD3_k127_278093_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000003961 118.0
LYD3_k127_278093_3 Belongs to the MIP aquaporin (TC 1.A.8) family K09873 GO:0000322,GO:0000325,GO:0000326,GO:0003674,GO:0005215,GO:0005275,GO:0005372,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005887,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006833,GO:0008150,GO:0008324,GO:0008519,GO:0009505,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009705,GO:0009941,GO:0012505,GO:0015075,GO:0015101,GO:0015200,GO:0015250,GO:0015267,GO:0015318,GO:0015695,GO:0015696,GO:0015837,GO:0015843,GO:0016020,GO:0016021,GO:0019755,GO:0022803,GO:0022838,GO:0022857,GO:0030054,GO:0030312,GO:0031090,GO:0031224,GO:0031226,GO:0031967,GO:0031975,GO:0034220,GO:0042044,GO:0042802,GO:0042807,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055044,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0072489,GO:0098588,GO:0098655,GO:0098805 - 0.0000000001709 61.0
LYD3_k127_278342_0 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 324.0
LYD3_k127_278342_1 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000009872 151.0
LYD3_k127_2789707_0 Tricorn protease C1 domain K08676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 621.0
LYD3_k127_2789707_1 pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 373.0
LYD3_k127_2789707_2 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K13640 - - 0.00000000000000000000000000000000000009164 147.0
LYD3_k127_2802362_0 transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 468.0
LYD3_k127_2802362_1 Glucokinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006758 289.0
LYD3_k127_2802362_2 PFAM ROK family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004012 238.0
LYD3_k127_2802362_3 Major Facilitator Superfamily K08218 - - 0.000000000000000000000000000000000000002394 148.0
LYD3_k127_2806346_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000004569 206.0
LYD3_k127_2809463_0 lytic transglycosylase activity K03194 - - 0.000000000821 72.0
LYD3_k127_2850499_0 Chlorophyllase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 511.0
LYD3_k127_2850499_1 - - - - 0.000000000000000000000000001424 119.0
LYD3_k127_2858039_0 serine-type D-Ala-D-Ala carboxypeptidase activity K05366 - 2.4.1.129,3.4.16.4 2.16e-231 747.0
LYD3_k127_2858039_1 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.00000000000000000000000000000000000000000003951 166.0
LYD3_k127_2871632_0 Belongs to the glycosyl hydrolase 13 family K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008106 496.0
LYD3_k127_2871632_1 peptidyl-prolyl cis-trans isomerase activity - - - 0.00002929 49.0
LYD3_k127_287763_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 2.029e-221 700.0
LYD3_k127_287763_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 314.0
LYD3_k127_287763_2 Radical SAM domain protein - - - 0.00000000000000000000000000000000000003693 160.0
LYD3_k127_2884898_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.081e-276 870.0
LYD3_k127_2884898_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000193 275.0
LYD3_k127_2884898_2 - - - - 0.00000000000000004677 87.0
LYD3_k127_288840_0 Sigma-54 interaction domain K03405 - 6.6.1.1 1.73e-205 651.0
LYD3_k127_288840_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 417.0
LYD3_k127_288840_2 Glycosyl transferase, family 9 K02843 - - 0.000000000000000000000000000000000000000000000009285 184.0
LYD3_k127_2923107_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002189 273.0
LYD3_k127_2923107_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000001997 122.0
LYD3_k127_2923107_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000004255 78.0
LYD3_k127_2940383_0 Phosphoesterase family - - - 9.369e-254 807.0
LYD3_k127_2940383_1 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001026 276.0
LYD3_k127_2940383_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000001461 249.0
LYD3_k127_2940383_3 RDD family - - - 0.0000000000000000000000000000000000000000000006862 171.0
LYD3_k127_2940383_4 membrane - - - 0.0000000000000000000000000000000000000000000064 171.0
LYD3_k127_2940383_5 Winged helix DNA-binding domain - - - 0.0000000000000000000003947 101.0
LYD3_k127_2953069_0 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 387.0
LYD3_k127_2953069_1 quinolinate catabolic process K00278,K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 1.4.3.16,2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008358 293.0
LYD3_k127_2953069_2 Thioesterase K07107 - - 0.00000000000000000000000000000001613 131.0
LYD3_k127_2958883_0 triose-phosphate isomerase activity K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 289.0
LYD3_k127_2958883_1 beta-galactosidase activity K01190 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004576 292.0
LYD3_k127_2964606_0 Response regulator, receiver K01007 - 2.7.9.2 4.78e-209 657.0
LYD3_k127_2964606_1 Belongs to the mandelate racemase muconate lactonizing enzyme family K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 466.0
LYD3_k127_2964606_2 - - - - 0.0000000000000000000000000000000000000000000000000000000003058 210.0
LYD3_k127_2964606_3 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000009457 127.0
LYD3_k127_2964606_4 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.00000000000000000000000001709 113.0
LYD3_k127_2964606_5 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000002819 81.0
LYD3_k127_2964606_6 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000003479 70.0
LYD3_k127_2964606_7 FR47-like protein - - - 0.000002467 50.0
LYD3_k127_2964606_8 OsmC-like protein - - - 0.00002397 49.0
LYD3_k127_2969898_0 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 342.0
LYD3_k127_2969898_1 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000006049 241.0
LYD3_k127_2969898_2 palmitoyl-(protein) hydrolase activity K06999 - - 0.0000000000000000000000000000000000000000003131 166.0
LYD3_k127_2970929_0 retrograde transport, endosome to Golgi K07095 - - 0.000000000000000000000000000000000000000000000531 185.0
LYD3_k127_2970929_1 NHL repeat containing protein - - - 0.000000000000000000006696 97.0
LYD3_k127_2974426_0 hydrolase activity, hydrolyzing O-glycosyl compounds K01337 - 3.4.21.50 1.761e-202 667.0
LYD3_k127_2974426_1 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000001542 152.0
LYD3_k127_2978847_0 Histidine kinase A domain protein - - - 0.0000000000000000001357 105.0
LYD3_k127_2978847_1 His Kinase A (phosphoacceptor) domain - - - 0.000002293 52.0
LYD3_k127_2984622_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 2.779e-203 647.0
LYD3_k127_2984622_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 520.0
LYD3_k127_2984622_2 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 299.0
LYD3_k127_2984622_3 regulation of microtubule-based process K06990 - - 0.0000000000000000000000000000000000000000000000000000008614 198.0
LYD3_k127_2984622_4 Rossmann-like domain - - - 0.00000000000000000000000000000004719 137.0
LYD3_k127_3025127_0 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 9.127e-277 859.0
LYD3_k127_3025127_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 447.0
LYD3_k127_3025127_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000008789 236.0
LYD3_k127_3025127_3 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000005432 179.0
LYD3_k127_3025127_4 cobalamin-transporting ATPase activity K02014,K16092 - - 0.00000000000000000000000000000000000000001411 166.0
LYD3_k127_3025127_5 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000000000000000000001797 153.0
LYD3_k127_3025127_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000001629 136.0
LYD3_k127_3025647_0 glutamine synthetase K01915 - 6.3.1.2 1.909e-196 617.0
LYD3_k127_3025647_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 361.0
LYD3_k127_3027524_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 4.617e-209 674.0
LYD3_k127_3027524_1 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 415.0
LYD3_k127_3027524_2 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000002141 205.0
LYD3_k127_3038581_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472,K02474,K13015 - 1.1.1.136,1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007898 491.0
LYD3_k127_3038581_1 Condensation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007937 330.0
LYD3_k127_3082405_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 331.0
LYD3_k127_3082405_1 Ethyl tert-butyl ether degradation - - - 0.000000000000000002143 89.0
LYD3_k127_3098644_0 Involved in the tonB-independent uptake of proteins K07277 - - 7.346e-255 816.0
LYD3_k127_3098644_1 peptidase activity, acting on L-amino acid peptides - - - 0.00000000000000000000000006113 109.0
LYD3_k127_3154213_0 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 442.0
LYD3_k127_3154213_1 TonB-dependent receptor K02014 - - 0.00000005475 61.0
LYD3_k127_3155280_0 Glycosyl hydrolases family 38 C-terminal domain K01191 - 3.2.1.24 7.422e-204 674.0
LYD3_k127_3159955_0 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 569.0
LYD3_k127_3159955_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 451.0
LYD3_k127_3159955_2 ATPases associated with a variety of cellular activities K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 337.0
LYD3_k127_3159955_3 ABC-2 family transporter protein K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 336.0
LYD3_k127_3159955_4 isomerase activity K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000001467 241.0
LYD3_k127_3159955_5 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000008974 197.0
LYD3_k127_3159955_6 - - - - 0.0000000000000000000001235 108.0
LYD3_k127_3187670_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 9.262e-291 914.0
LYD3_k127_3187670_1 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 380.0
LYD3_k127_3187670_2 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 323.0
LYD3_k127_3187670_3 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000009776 241.0
LYD3_k127_3187670_4 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000005518 147.0
LYD3_k127_3187670_5 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000004354 134.0
LYD3_k127_3199641_0 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 500.0
LYD3_k127_3199641_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 297.0
LYD3_k127_3199641_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K03205 - - 0.0000000000000000000000000000000000000000000000000000000000000002728 247.0
LYD3_k127_3199641_3 Protein of unknown function (DUF1015) K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000003736 224.0
LYD3_k127_3220404_0 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 490.0
LYD3_k127_3220404_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 479.0
LYD3_k127_3220404_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 310.0
LYD3_k127_3220404_3 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000002532 107.0
LYD3_k127_3225734_0 arabinose-5-phosphate isomerase activity K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 322.0
LYD3_k127_3243087_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000002098 251.0
LYD3_k127_3243087_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000156 238.0
LYD3_k127_3243087_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000002957 211.0
LYD3_k127_324879_0 peptidase activity, acting on L-amino acid peptides K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 374.0
LYD3_k127_324879_1 - - - - 0.0000000001853 71.0
LYD3_k127_3253798_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 8.221e-246 769.0
LYD3_k127_3253798_1 rRNA binding K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000003094 194.0
LYD3_k127_3253798_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000005493 166.0
LYD3_k127_3253798_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000006731 166.0
LYD3_k127_3253798_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000005774 109.0
LYD3_k127_3253798_5 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000002271 101.0
LYD3_k127_3284070_0 Branched-chain amino acid transport system / permease component K10439,K10440 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015591,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 345.0
LYD3_k127_3284070_1 ABC transporter K17215 - - 0.0000000000000000000000000000000000000000000000000000000000000002182 226.0
LYD3_k127_3284070_2 Periplasmic binding proteins and sugar binding domain of LacI family K10439 - - 0.000000000000000000000000000000000000000000000000000000000005363 215.0
LYD3_k127_3285441_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 537.0
LYD3_k127_3285441_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000007474 241.0
LYD3_k127_3288420_0 tryptophanase activity K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 500.0
LYD3_k127_3288420_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00004913 47.0
LYD3_k127_3318016_0 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 497.0
LYD3_k127_3318016_1 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000009097 159.0
LYD3_k127_3318016_2 Methyltransferase small domain - - - 0.0000000000000000006988 93.0
LYD3_k127_3338298_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 299.0
LYD3_k127_3338298_1 Putative heavy-metal-binding - - - 0.000000000000000000000000000000000000000002826 157.0
LYD3_k127_3355497_0 PFAM Phosphate acetyl butaryl transferase K00634 - 2.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000004297 244.0
LYD3_k127_3355497_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000001177 168.0
LYD3_k127_3355497_2 butyrate kinase activity K00929 - 2.7.2.7 0.00000000000000000000000000000000000000171 149.0
LYD3_k127_3355497_3 Protein of unknown function, DUF255 - - - 0.000000000000000000000005241 115.0
LYD3_k127_3358619_0 glutamyl-tRNA reductase activity K02407,K02492 GO:0005575,GO:0005623,GO:0009288,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0055040 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 400.0
LYD3_k127_3358619_1 cytochrome complex assembly - - - 0.00000000000000000000000000000000000000000000000000000000000000001221 233.0
LYD3_k127_3358619_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000003223 211.0
LYD3_k127_337447_0 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 7.485e-198 629.0
LYD3_k127_337447_1 Methionine biosynthesis protein MetW - - - 0.000000000000000000000002761 113.0
LYD3_k127_3385893_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 471.0
LYD3_k127_3385893_1 protein transport across the cell outer membrane K02666,K12066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005727 258.0
LYD3_k127_3385893_3 Pilus assembly protein PilX K02673 - - 0.000000000000000000000000000000000000000000009418 176.0
LYD3_k127_3385893_4 - - - - 0.0000000000000000000000000000000003599 143.0
LYD3_k127_338994_0 Transposase, Mutator family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 605.0
LYD3_k127_338994_1 - - - - 0.00000000000000000000112 104.0
LYD3_k127_3394138_0 NHL repeat containing protein K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 338.0
LYD3_k127_3394138_1 aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 289.0
LYD3_k127_3394138_2 PFAM FecR protein K20276 - - 0.000000000000000000001296 109.0
LYD3_k127_3408646_0 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 489.0
LYD3_k127_3408646_1 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002337 270.0
LYD3_k127_3408646_2 - - - - 0.00000001242 65.0
LYD3_k127_3415328_0 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005912 264.0
LYD3_k127_3415328_1 DNA recombination K03546,K03631 - - 0.00000000001257 74.0
LYD3_k127_3415328_2 IgA Peptidase M64 - - - 0.000000009225 57.0
LYD3_k127_3419081_0 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 383.0
LYD3_k127_3419081_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000472 226.0
LYD3_k127_3419081_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.00000000000000000000000000000000000000000000003962 175.0
LYD3_k127_3419081_3 - - - - 0.0000000000000000000000000000000000000001585 163.0
LYD3_k127_3419081_4 WD40 repeats K20332 - - 0.00000000007374 69.0
LYD3_k127_3420008_0 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 505.0
LYD3_k127_3435512_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 548.0
LYD3_k127_3435512_1 Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities K01524 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006797,GO:0006798,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009056,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360,GO:1901575 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 341.0
LYD3_k127_3435512_2 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000000003094 117.0
LYD3_k127_3435512_3 CHAD - - - 0.00000196 59.0
LYD3_k127_3437299_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002504 269.0
LYD3_k127_3437299_1 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000008371 171.0
LYD3_k127_3440156_0 PFAM glycoside hydrolase family 2 sugar binding - - - 2.567e-295 927.0
LYD3_k127_3440156_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000004985 88.0
LYD3_k127_344120_0 4 iron, 4 sulfur cluster binding K00184 - - 4.117e-241 763.0
LYD3_k127_344120_1 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 365.0
LYD3_k127_3442475_0 Alpha mannosidase, middle domain K01191 - 3.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 347.0
LYD3_k127_3442475_1 Sodium:solute symporter family - - - 0.0000000000001964 74.0
LYD3_k127_3447568_0 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 4.093e-236 745.0
LYD3_k127_3447568_1 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 604.0
LYD3_k127_3447568_2 ferredoxin-NADP+ reductase activity K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 452.0
LYD3_k127_3447568_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 347.0
LYD3_k127_3447568_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 325.0
LYD3_k127_3447568_5 nitronate monooxygenase activity K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
LYD3_k127_3447568_6 4Fe-4S binding domain - - - 0.000000000000000000000000000000000002575 141.0
LYD3_k127_3447568_7 Domain of unknown function (DUF309) K09763 - - 0.000000000000000000001754 98.0
LYD3_k127_3447568_8 of nitrite reductase and ring-hydroxylating dioxygenase - - - 0.000000000000002594 79.0
LYD3_k127_3450811_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.087e-280 883.0
LYD3_k127_3450811_1 valine-tRNA ligase activity K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000001725 128.0
LYD3_k127_3450811_2 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000008262 57.0
LYD3_k127_3459657_0 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 563.0
LYD3_k127_3459657_1 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 380.0
LYD3_k127_3459657_2 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 363.0
LYD3_k127_3459657_3 FES K03575 - - 0.00000000000000000000000000000000000000000000000000000000000005139 223.0
LYD3_k127_3459657_4 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000008697 199.0
LYD3_k127_3459657_5 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.000000000000000000000000000000000000000001318 161.0
LYD3_k127_3459657_6 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.00000000000000000000000000000000002687 147.0
LYD3_k127_3474733_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 363.0
LYD3_k127_3474733_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 297.0
LYD3_k127_3515178_0 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 396.0
LYD3_k127_3515178_1 acetate kinase activity K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 344.0
LYD3_k127_3544567_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1135.0
LYD3_k127_3544567_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001255 250.0
LYD3_k127_3544567_2 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000007397 174.0
LYD3_k127_3544567_3 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000002934 115.0
LYD3_k127_3544567_4 PFAM Rhodanese domain protein - - - 0.000000000000000002437 90.0
LYD3_k127_3544567_5 regulatory protein, FmdB family - - - 0.000000002665 61.0
LYD3_k127_3569348_0 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 392.0
LYD3_k127_3569348_1 - - - - 0.00000000000000000000000000000000000000000000000000004932 201.0
LYD3_k127_3569348_2 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000000000000000009037 108.0
LYD3_k127_3578617_0 aerobic electron transport chain K00425 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 3.22e-220 691.0
LYD3_k127_3578617_1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity K00790 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 526.0
LYD3_k127_3578617_10 membrane transporter protein K07090 - - 0.00000000000000006249 91.0
LYD3_k127_3578617_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 475.0
LYD3_k127_3578617_3 oxidative phosphorylation K00426 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 417.0
LYD3_k127_3578617_4 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005464 270.0
LYD3_k127_3578617_5 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000007949 206.0
LYD3_k127_3578617_6 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000005539 199.0
LYD3_k127_3578617_7 HEAT repeats - - - 0.00000000000000000000000006929 119.0
LYD3_k127_3578617_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000001799 113.0
LYD3_k127_3578617_9 Sigma-70, region 4 K03088 - - 0.00000000000000004348 85.0
LYD3_k127_3585646_0 Fibronectin type III-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 612.0
LYD3_k127_3585646_1 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 299.0
LYD3_k127_358621_0 ATP synthesis coupled electron transport K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 333.0
LYD3_k127_358621_1 arsenite transmembrane transporter activity - - - 0.000000000000000000000000000000000000004305 152.0
LYD3_k127_359466_0 transferase activity, transferring glycosyl groups K00694,K00786 - 2.4.1.12 7.835e-225 706.0
LYD3_k127_359466_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 572.0
LYD3_k127_359466_2 Sigma-54 interaction domain K03413,K13589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 394.0
LYD3_k127_359466_3 phosphate acetyltransferase K00029,K00625,K13788 - 1.1.1.40,2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000001286 243.0
LYD3_k127_359466_5 peptidoglycan binding K03749,K07114,K08300,K09859 - 3.1.26.12 0.00000000000000000000000001487 119.0
LYD3_k127_360192_0 Peptidase family C25 - - - 0.0000000000000007748 91.0
LYD3_k127_3607683_0 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 570.0
LYD3_k127_3607683_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 441.0
LYD3_k127_3607683_2 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000584 250.0
LYD3_k127_3609334_0 TonB-dependent receptor - - - 2.814e-229 725.0
LYD3_k127_3609334_1 - - - - 0.0000000000000471 78.0
LYD3_k127_361865_0 symporter activity K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 391.0
LYD3_k127_361865_1 phosphorelay signal transduction system K03413,K21993 - - 0.0000003243 53.0
LYD3_k127_361865_2 Thiamin pyrophosphokinase, vitamin B1 binding domain K00949 - 2.7.6.2 0.00008661 49.0
LYD3_k127_3636207_0 3-deoxy-8-phosphooctulonate synthase activity K01627 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008676,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016765,GO:0019294,GO:0019752,GO:0022607,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 349.0
LYD3_k127_3636207_1 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000002156 155.0
LYD3_k127_3636207_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000001245 85.0
LYD3_k127_3666196_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 1.253e-239 754.0
LYD3_k127_3666196_1 protein transport across the cell outer membrane K02653 - - 0.0000000000000000000000000000000000000000000199 164.0
LYD3_k127_3674241_0 4 iron, 4 sulfur cluster binding - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 567.0
LYD3_k127_3674241_1 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 460.0
LYD3_k127_3674241_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005496 289.0
LYD3_k127_3674241_3 Cytochrome c K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000001266 234.0
LYD3_k127_3674241_4 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K19591,K22491 - - 0.000000000000000000000000000000000000001808 150.0
LYD3_k127_3674241_5 holo-[acyl-carrier-protein] synthase activity K00950,K00997,K01207,K01775,K06133,K06925,K18014 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.6.3,2.7.8.7,3.2.1.52,4.3.1.14,5.1.1.1 0.0000000000000000000000000000000001682 136.0
LYD3_k127_3674241_6 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 - - 0.000000000000162 73.0
LYD3_k127_3681705_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 602.0
LYD3_k127_3681705_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 476.0
LYD3_k127_3681705_2 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000002662 169.0
LYD3_k127_3688460_0 histone H2A K63-linked ubiquitination K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 406.0
LYD3_k127_3688460_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 353.0
LYD3_k127_371250_0 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 5.219e-262 828.0
LYD3_k127_371250_1 PFAM glycosyl transferase group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000568 172.0
LYD3_k127_371250_2 Doxx family K15977 - - 0.00000000000000000000000000000000001721 138.0
LYD3_k127_371250_3 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000004575 106.0
LYD3_k127_3729045_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 451.0
LYD3_k127_3729045_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000005264 212.0
LYD3_k127_3729045_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000001477 136.0
LYD3_k127_3729045_3 - - - - 0.0000000000001623 82.0
LYD3_k127_3729300_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 383.0
LYD3_k127_3729300_1 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 355.0
LYD3_k127_3729300_2 CTP:tRNA cytidylyltransferase activity K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000001894 258.0
LYD3_k127_3729300_3 efflux transmembrane transporter activity K12340 - - 0.0000000000000000000000000000000000000000000000000000000001295 222.0
LYD3_k127_3729300_4 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000007672 176.0
LYD3_k127_3742699_0 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 317.0
LYD3_k127_3742699_1 TIGRFAM Carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001212 259.0
LYD3_k127_3742699_2 Methyltransferase domain protein - - - 0.0000000000000000000000000000003633 132.0
LYD3_k127_3743389_0 ftsk spoiiie K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 300.0
LYD3_k127_3743389_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000007219 209.0
LYD3_k127_3743389_2 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000742 205.0
LYD3_k127_3743389_3 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000000000000005971 187.0
LYD3_k127_3743389_4 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.000000000000000000000000000000001149 140.0
LYD3_k127_3743389_5 Integral membrane protein DUF92 K00981,K18678 GO:0005575,GO:0016020 2.7.1.182,2.7.7.41 0.00000000000000000000000000000002054 133.0
LYD3_k127_3743389_6 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000003578 88.0
LYD3_k127_3762542_0 mRNA catabolic process K18682 - - 5.328e-214 676.0
LYD3_k127_3762542_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000757 168.0
LYD3_k127_3762542_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000002158 56.0
LYD3_k127_377451_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 1.282e-288 905.0
LYD3_k127_377451_1 Amidohydrolase family - - - 3.973e-280 882.0
LYD3_k127_377451_2 PFAM RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 496.0
LYD3_k127_377451_3 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000003071 188.0
LYD3_k127_377451_4 DinB family - - - 0.0000002132 59.0
LYD3_k127_3775670_0 peptide catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 415.0
LYD3_k127_3775670_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000004986 53.0
LYD3_k127_3787800_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 3.349e-213 685.0
LYD3_k127_3787800_1 aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 503.0
LYD3_k127_3787800_2 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001446 218.0
LYD3_k127_3787800_3 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000002104 203.0
LYD3_k127_3787800_4 NUDIX domain - - - 0.00000000000000000000000000000000009561 142.0
LYD3_k127_3787800_5 s1 p1 nuclease - - - 0.000000000000000000000000000000006794 142.0
LYD3_k127_3787800_6 calcium- and calmodulin-responsive adenylate cyclase activity K01190,K01406,K07004,K13277 - 3.2.1.23,3.4.24.40 0.0000000000000000001096 102.0
LYD3_k127_3787800_7 mercury ion transmembrane transporter activity K07213 - - 0.00000000000001533 76.0
LYD3_k127_3787800_8 Tetratricopeptide repeat - - - 0.000000000001861 79.0
LYD3_k127_3813008_0 arabinogalactan endo-1,4-beta-galactosidase activity - - - 1.441e-266 837.0
LYD3_k127_3813008_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 604.0
LYD3_k127_3813008_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 417.0
LYD3_k127_3813008_3 arabinogalactan endo-1,4-beta-galactosidase activity K01224 - 3.2.1.89 0.0000000000000000000000000000000000000000000002554 172.0
LYD3_k127_3818546_0 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.216e-240 758.0
LYD3_k127_3818546_1 acyl-CoA dehydrogenase activity K06446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 593.0
LYD3_k127_3818546_2 NAD(P)H binding domain of trans-2-enoyl-CoA reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 349.0
LYD3_k127_3825133_0 protein targeting K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 508.0
LYD3_k127_3825133_1 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000005606 168.0
LYD3_k127_3827833_0 leucine-zipper of insertion element IS481 K00986,K07497 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000001177 269.0
LYD3_k127_3827833_1 COG2963 Transposase and inactivated derivatives K07483 - - 0.00000000000000000000000000002186 123.0
LYD3_k127_3827833_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000002082 98.0
LYD3_k127_3833370_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000001215 138.0
LYD3_k127_3833370_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K01487,K12960 - 3.5.4.28,3.5.4.3,3.5.4.31 0.00000000000000000000000000009417 132.0
LYD3_k127_384939_0 AcrB/AcrD/AcrF family - - - 4.39e-244 779.0
LYD3_k127_384939_1 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 399.0
LYD3_k127_384939_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000001077 214.0
LYD3_k127_3865955_0 GDP-mannose 4,6-dehydratase activity K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 537.0
LYD3_k127_3865955_1 Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000004396 140.0
LYD3_k127_3865955_2 Methyltransferase domain - - - 0.000000000000000000000000003002 118.0
LYD3_k127_3865955_3 Polysaccharide biosynthesis protein - - - 0.000000000009281 77.0
LYD3_k127_3884592_0 Belongs to the glycosyl hydrolase 3 family K05349 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015926,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.21 2.799e-291 910.0
LYD3_k127_3884592_1 symporter activity K03307 - - 1.253e-244 759.0
LYD3_k127_3901793_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.603e-267 857.0
LYD3_k127_3901793_1 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003676 252.0
LYD3_k127_3901793_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000001541 131.0
LYD3_k127_3903956_0 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 494.0
LYD3_k127_3948911_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 7.889e-208 659.0
LYD3_k127_3954626_0 galactose-1-phosphate K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 440.0
LYD3_k127_3954626_1 beta-galactosidase activity K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 321.0
LYD3_k127_3954626_2 - - - - 0.00000000000000000000000000000000000000000000009133 175.0
LYD3_k127_3958031_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 443.0
LYD3_k127_3958031_1 lipoprotein YddW precursor K01189 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004985 292.0
LYD3_k127_3958031_2 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000000000001795 102.0
LYD3_k127_3958031_3 PFAM Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000002873 95.0
LYD3_k127_397302_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K16881 - 2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 526.0
LYD3_k127_397302_1 lipoprotein biosynthetic process K13292 - - 0.000000000000000000000000000000000000000000000000000000000007763 216.0
LYD3_k127_397302_2 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.00000000000000000000000000000000000000000000003136 174.0
LYD3_k127_3996173_0 IgA Peptidase M64 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 407.0
LYD3_k127_3996173_1 homocysteine catabolic process K01372,K02316 - 3.4.22.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 327.0
LYD3_k127_3996173_2 Belongs to the peptidase S8 family - - - 0.00000000000005224 85.0
LYD3_k127_4003192_0 N-Acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00000000000000000000005255 115.0
LYD3_k127_4006972_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 284.0
LYD3_k127_4006972_1 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001638 290.0
LYD3_k127_4006972_2 Peptidase family M54 K06974 - - 0.0000000000000000000000000000000000000171 154.0
LYD3_k127_4025523_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 580.0
LYD3_k127_4025523_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000002822 134.0
LYD3_k127_4025523_2 Methyltransferase domain - - - 0.00000000000000000000005292 109.0
LYD3_k127_4030645_0 Xylose isomerase domain protein TIM barrel K03335 - 4.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 383.0
LYD3_k127_4030645_1 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 376.0
LYD3_k127_4030645_2 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000001184 202.0
LYD3_k127_4042697_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 565.0
LYD3_k127_4042697_1 arsenite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001976 254.0
LYD3_k127_4042998_0 nucleic acid phosphodiester bond hydrolysis K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 501.0
LYD3_k127_4042998_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008566 240.0
LYD3_k127_4042998_2 - - - - 0.0000000000000000000000000000000000000000000000000135 199.0
LYD3_k127_4062533_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 426.0
LYD3_k127_4062533_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009125,GO:0009129,GO:0009130,GO:0009131,GO:0009157,GO:0009159,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009178,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0032259,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046078,GO:0046079,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 378.0
LYD3_k127_4062533_2 PFAM peptidase T2 asparaginase 2 K01444,K13051 - 3.4.19.5,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 379.0
LYD3_k127_4062533_3 Belongs to the pseudouridine synthase RsuA family K06181 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000003636 237.0
LYD3_k127_4062533_4 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000007758 197.0
LYD3_k127_4062533_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000007661 151.0
LYD3_k127_4062533_6 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000003347 112.0
LYD3_k127_4062533_7 TIGRFAM daunorubicin resistance ABC transporter, inner membrane subunit B K01992 - - 0.000000000000000051 91.0
LYD3_k127_4064699_0 metal-dependent hydrolase with the TIM-barrel fold - - - 1.032e-196 632.0
LYD3_k127_4064699_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 624.0
LYD3_k127_4064699_2 Aldo Keto reductase K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 352.0
LYD3_k127_4064699_3 Thioredoxin reductase K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 366.0
LYD3_k127_4076087_0 inositol monophosphate 1-phosphatase activity K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000007177 254.0
LYD3_k127_4076087_1 Magnesium transport protein CorA K03284 GO:0000041,GO:0000287,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015087,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0050897,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0070838,GO:0071840,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903830 - 0.0000000000000000000000000000000000000000000000000000000000000003022 227.0
LYD3_k127_4077924_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 3.766e-296 922.0
LYD3_k127_4077924_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 482.0
LYD3_k127_4077924_2 Squalene/phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 290.0
LYD3_k127_4077924_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000002312 279.0
LYD3_k127_4077924_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760,K00939,K15780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,2.7.4.3,6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000002353 231.0
LYD3_k127_4077924_5 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000304 220.0
LYD3_k127_4077924_6 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000614 205.0
LYD3_k127_4080946_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 8.939e-273 855.0
LYD3_k127_4080946_1 GTP binding K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 516.0
LYD3_k127_4080946_2 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004845,GO:0004849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016763,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042802,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000009933 259.0
LYD3_k127_4080946_3 L-threonylcarbamoyladenylate synthase K07566 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000006109 228.0
LYD3_k127_4080946_4 ADP-glyceromanno-heptose 6-epimerase activity K00311 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.5.5.1 0.000000000000000000000000004241 116.0
LYD3_k127_4080946_5 Response regulator receiver - - - 0.0000000000000000000000000269 113.0
LYD3_k127_4105337_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 491.0
LYD3_k127_4105337_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000004518 170.0
LYD3_k127_4124944_0 Glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000001201 191.0
LYD3_k127_4124944_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000002447 155.0
LYD3_k127_4125100_0 IgA Peptidase M64 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 378.0
LYD3_k127_4125100_1 cellulose binding - - - 0.0000000000000000000009746 104.0
LYD3_k127_4131374_0 coproporphyrinogen oxidase activity K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 530.0
LYD3_k127_4131374_1 enterotoxin - - - 0.000000007697 63.0
LYD3_k127_4136082_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 421.0
LYD3_k127_4136082_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 364.0
LYD3_k127_4136082_2 PFAM PP-loop domain protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009718 322.0
LYD3_k127_4136082_3 POT family - - - 0.0000000000000000000000000000003826 124.0
LYD3_k127_4136082_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000006444 65.0
LYD3_k127_4151630_0 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000007743 173.0
LYD3_k127_4151630_1 response to oxidative stress K04063 - - 0.000000000000000000000000000000000000004092 151.0
LYD3_k127_4151630_2 Protein of unknown function (DUF2892) - - - 0.0000000000001338 74.0
LYD3_k127_4151630_3 AntiSigma factor - - - 0.000000000002034 71.0
LYD3_k127_4151630_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000004565 68.0
LYD3_k127_4151630_5 - - - - 0.0000002606 56.0
LYD3_k127_4153463_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000003515 251.0
LYD3_k127_4153463_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000618 51.0
LYD3_k127_4158612_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 504.0
LYD3_k127_4158612_1 amine dehydrogenase activity - - - 0.0000000000003476 71.0
LYD3_k127_4158612_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000393 74.0
LYD3_k127_4158612_3 outer membrane efflux protein - - - 0.000000004886 68.0
LYD3_k127_4160351_0 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000003207 208.0
LYD3_k127_4160351_1 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000004098 175.0
LYD3_k127_4160351_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00007138 47.0
LYD3_k127_4163733_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1056.0
LYD3_k127_4163733_1 SMART PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 308.0
LYD3_k127_4163733_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000003815 218.0
LYD3_k127_4163733_3 - K07275 - - 0.00000000000000000000000000000000000000000000000436 182.0
LYD3_k127_4184378_0 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 408.0
LYD3_k127_4184378_1 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
LYD3_k127_4184378_2 NUBPL iron-transfer P-loop NTPase K03496 - - 0.00000000000000000000000000000000000000005337 159.0
LYD3_k127_4184378_3 Histidine kinase - - - 0.00000000000000000000000000000000000000467 168.0
LYD3_k127_419347_0 Periplasmic binding protein domain K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 410.0
LYD3_k127_419347_1 aldo keto reductase K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 355.0
LYD3_k127_419347_3 transport system, ATPase K10441 - 3.6.3.17 0.000000000000003281 76.0
LYD3_k127_4213667_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 409.0
LYD3_k127_4213667_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000001302 191.0
LYD3_k127_4213667_2 ATP synthesis coupled electron transport K00343 - 1.6.5.3 0.000000000000000000000000001434 114.0
LYD3_k127_4213667_3 - - - - 0.000000000001464 77.0
LYD3_k127_4261203_0 - - - - 0.0 1641.0
LYD3_k127_4261203_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 520.0
LYD3_k127_4261203_2 lipopolysaccharide-transporting ATPase activity K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 411.0
LYD3_k127_4261203_3 lipopolysaccharide-transporting ATPase activity K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 337.0
LYD3_k127_4261203_4 - - - - 0.000000000000000000000000000000000000000000000000000000000005142 223.0
LYD3_k127_4261203_5 Involved in the tonB-independent uptake of proteins K07277 - - 0.000000000000000000000000000000000000000000000703 170.0
LYD3_k127_4262469_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 599.0
LYD3_k127_4262469_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 465.0
LYD3_k127_4262469_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000009872 84.0
LYD3_k127_4278272_0 phosphopyruvate hydratase activity K01689 GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0044877,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.2.1.11 2.031e-204 646.0
LYD3_k127_4278272_1 ABC transporter K06158 - - 9.429e-195 628.0
LYD3_k127_4278272_2 Domain of unknown function (DUF4921) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 569.0
LYD3_k127_4278272_3 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 469.0
LYD3_k127_4278272_4 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000007869 225.0
LYD3_k127_4278272_5 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.000000000000000000000000000000000000000000000000000000000254 216.0
LYD3_k127_4278272_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000001475 130.0
LYD3_k127_4285773_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000001249 175.0
LYD3_k127_4306770_0 PFAM Aminotransferase class I and II K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 511.0
LYD3_k127_4306770_1 Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 316.0
LYD3_k127_4306770_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
LYD3_k127_4306770_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000005584 239.0
LYD3_k127_4306770_4 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000001422 228.0
LYD3_k127_4306770_5 PFAM NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000002281 213.0
LYD3_k127_4306770_6 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000004169 188.0
LYD3_k127_4306770_7 PFAM regulatory protein MarR K15973 - - 0.00000000000000000000000000000000000000000000000008597 181.0
LYD3_k127_4306770_8 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000002131 144.0
LYD3_k127_4312373_0 peptidyl-prolyl cis-trans isomerase activity K01802,K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 458.0
LYD3_k127_4312373_1 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 319.0
LYD3_k127_4312373_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000009047 270.0
LYD3_k127_4312373_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000007422 164.0
LYD3_k127_4312373_4 Methyltransferase - - - 0.0000000000000000000000000000000000000005949 158.0
LYD3_k127_4312373_5 - - - - 0.000000000000000000487 96.0
LYD3_k127_4320266_0 MgtE intracellular N domain K02000,K05847 - 3.6.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000007483 276.0
LYD3_k127_4320266_1 TIGRFAM NRAMP (natural resistance-associated macrophage protein) metal ion transporters - - - 0.00000000000000000000000000000000000000000000000000002667 190.0
LYD3_k127_4320266_2 DNA mediated transformation K04096 - - 0.000000000000000000000000001695 120.0
LYD3_k127_4357134_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 456.0
LYD3_k127_4368329_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 6.687e-199 633.0
LYD3_k127_4368329_1 tetratricopeptide repeat - - - 0.000000000000000000000169 105.0
LYD3_k127_4379356_0 Class II Aldolase and Adducin N-terminal domain K01628,K18847 - 2.2.1.8,4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 340.0
LYD3_k127_4379356_1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain - - - 0.00000000000000000000000000000000000000000000000000000000000001214 233.0
LYD3_k127_4387488_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 308.0
LYD3_k127_4387488_1 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000000000000000000000000000000000000000000436 179.0
LYD3_k127_4387488_2 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000327 158.0
LYD3_k127_4387488_3 Transcriptional regulator - - - 0.000000000000000000000000000004377 125.0
LYD3_k127_440449_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 527.0
LYD3_k127_440449_1 aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 332.0
LYD3_k127_4421234_0 DNA topoisomerase II activity K02469 - 5.99.1.3 0.0 1036.0
LYD3_k127_4421234_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 8.978e-235 746.0
LYD3_k127_4421234_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 456.0
LYD3_k127_4421234_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 343.0
LYD3_k127_4421234_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002846 281.0
LYD3_k127_4421234_5 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0000000000003975 76.0
LYD3_k127_4441577_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 332.0
LYD3_k127_4441577_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002122 257.0
LYD3_k127_4448596_0 lipopolysaccharide-transporting ATPase activity K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 350.0
LYD3_k127_4448596_1 lipopolysaccharide binding K09774 - - 0.0000000000000000000000000000000000000000107 164.0
LYD3_k127_4450269_0 DNA-templated transcription, termination K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 1.457e-226 706.0
LYD3_k127_4450269_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000004741 114.0
LYD3_k127_4526561_0 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 460.0
LYD3_k127_4526561_1 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 352.0
LYD3_k127_4526561_2 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000005916 262.0
LYD3_k127_4526561_3 peptidase activity - - - 0.000000000000000000000000009695 119.0
LYD3_k127_453990_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K00558,K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 2.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 369.0
LYD3_k127_453990_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 327.0
LYD3_k127_4564555_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 1.402e-250 781.0
LYD3_k127_4564555_1 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.00000000000000002828 84.0
LYD3_k127_459812_0 peptidyl-prolyl cis-trans isomerase activity K01802,K03770 - 5.2.1.8 0.00000000000000000000000000000000004852 152.0
LYD3_k127_459812_1 endo-1,4-beta-xylanase activity - - - 0.0000000001046 63.0
LYD3_k127_4607620_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404,K00405,K15862 GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005488,GO:0005506,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015975,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0016705,GO:0017144,GO:0019411,GO:0019637,GO:0019646,GO:0019693,GO:0019825,GO:0020037,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045154,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.9.3.1 9.733e-236 734.0
LYD3_k127_4607620_1 mercury ion transmembrane transporter activity K01533,K17686 GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 6.406e-231 739.0
LYD3_k127_4607620_2 Cytochrome oxidase maturation protein - - - 0.000000001595 63.0
LYD3_k127_4621125_0 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 460.0
LYD3_k127_4621125_1 inositol monophosphate 1-phosphatase activity K01082,K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002413 286.0
LYD3_k127_4621125_2 Amylo-alpha-1,6-glucosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007791 263.0
LYD3_k127_4621125_3 nUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000006701 173.0
LYD3_k127_4621125_4 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000001156 124.0
LYD3_k127_4621125_5 PFAM MscS Mechanosensitive ion channel - - - 0.00007035 49.0
LYD3_k127_4632091_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 450.0
LYD3_k127_4632091_1 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002676 253.0
LYD3_k127_4632091_2 sigma factor antagonist activity K04757,K07315 - 2.7.11.1,3.1.3.3 0.00000000000000000000000000000005259 138.0
LYD3_k127_4632091_3 antisigma factor binding K04749 - - 0.000000000000000000000000000003221 124.0
LYD3_k127_4632274_0 C-terminal binding-module, SLH-like, of glucodextranase K01178,K01200 - 3.2.1.3,3.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 422.0
LYD3_k127_4632274_1 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000004864 202.0
LYD3_k127_4659560_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 434.0
LYD3_k127_4659560_1 Pirin K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 393.0
LYD3_k127_4659560_2 Protein of unknown function (DUF2721) - - - 0.0000000000000000000001454 106.0
LYD3_k127_4659560_3 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000000003844 83.0
LYD3_k127_4659560_4 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000001413 78.0
LYD3_k127_466746_0 ribonuclease E activity K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 542.0
LYD3_k127_466746_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 424.0
LYD3_k127_466746_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 329.0
LYD3_k127_466746_3 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000000412 220.0
LYD3_k127_466746_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K02652,K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0017076,GO:0030234,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0044464,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071496,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000003969 86.0
LYD3_k127_4690054_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 385.0
LYD3_k127_4690054_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010269,GO:0010447,GO:0016020,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0020012,GO:0030145,GO:0030682,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052059,GO:0052173,GO:0052200,GO:0052385,GO:0052550,GO:0052564,GO:0052567,GO:0052572,GO:0055114,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071291,GO:0071450,GO:0071451,GO:0071944,GO:0072593,GO:0075136,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.0000000000000000000000000000000000000000000000000000003141 203.0
LYD3_k127_4690054_2 iron-sulfur transferase activity K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.000000000000000000000000000000000000000000000000003347 188.0
LYD3_k127_4690054_3 protein maturation K13628 - - 0.000000000000000000000000000000000000000000000005161 176.0
LYD3_k127_4690054_4 Pfam:DUF59 K02612 - - 0.00000000000000000000000000000000000002838 146.0
LYD3_k127_4690054_5 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000792 115.0
LYD3_k127_4690054_6 iron-sulfur cluster assembly - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.000000000000359 71.0
LYD3_k127_4704502_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 315.0
LYD3_k127_4704502_1 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000002119 197.0
LYD3_k127_4768461_0 DinB superfamily - - - 0.00000000000000000000000000000000006748 140.0
LYD3_k127_4768461_1 PFAM EamA-like transporter family - - - 0.000000000000000003107 93.0
LYD3_k127_4768461_2 Transcriptional - - - 0.0008169 49.0
LYD3_k127_4782446_0 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 395.0
LYD3_k127_4782446_1 Cold shock protein domain K03704 - - 0.0000000000000000000000001241 107.0
LYD3_k127_4782446_2 Two component regulator three Y - - - 0.0000000000000000000000006942 117.0
LYD3_k127_4782446_3 exo-alpha-(2->6)-sialidase activity K01186 - 3.2.1.18 0.000000000000000000001293 104.0
LYD3_k127_4784757_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.752e-227 722.0
LYD3_k127_4784757_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000008411 267.0
LYD3_k127_4784757_2 PFAM penicillin-binding protein transpeptidase K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000002046 237.0
LYD3_k127_4784757_3 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000001528 171.0
LYD3_k127_4784757_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000005919 69.0
LYD3_k127_4811281_0 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.0 1200.0
LYD3_k127_4811281_1 Proline racemase K01777 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016855,GO:0018112,GO:0019752,GO:0036361,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0047661,GO:0050346,GO:0071704,GO:1901564 5.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 465.0
LYD3_k127_4811281_2 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 449.0
LYD3_k127_4811281_3 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 443.0
LYD3_k127_4811281_4 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 371.0
LYD3_k127_4811281_5 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 321.0
LYD3_k127_4811281_6 PFAM Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002127 257.0
LYD3_k127_4812169_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 473.0
LYD3_k127_4812169_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001552 271.0
LYD3_k127_4812169_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 0.0000000000000002848 79.0
LYD3_k127_4812169_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.000000000000002066 85.0
LYD3_k127_482109_0 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000001059 131.0
LYD3_k127_482109_1 Predicted membrane protein (DUF2339) - - - 0.0000000000005584 70.0
LYD3_k127_4821660_0 PFAM Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 552.0
LYD3_k127_4821660_1 Thiamine pyrophosphate enzyme, central domain K03336 - 3.7.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 337.0
LYD3_k127_4823554_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 432.0
LYD3_k127_4823554_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 313.0
LYD3_k127_4823554_2 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001207 282.0
LYD3_k127_4823554_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000003974 176.0
LYD3_k127_4853708_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 578.0
LYD3_k127_4853708_1 diaminopimelate decarboxylase activity K01586,K05366 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.1.129,3.4.16.4,4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 386.0
LYD3_k127_4853708_2 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 323.0
LYD3_k127_4853708_3 Belongs to the 'phage' integrase family K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 317.0
LYD3_k127_4853708_4 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000000000000000000000000000000000000003514 195.0
LYD3_k127_4853708_5 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000005169 171.0
LYD3_k127_4853708_6 - - - - 0.0000000000000000000000000000000000000002691 163.0
LYD3_k127_4853708_7 Planctomycete cytochrome C - - - 0.0000000000006652 74.0
LYD3_k127_4853708_8 cellulose binding - - - 0.000000000004459 72.0
LYD3_k127_4854872_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000006422 85.0
LYD3_k127_4854872_1 Protein of unknown function (DUF1573) - - - 0.000000004203 66.0
LYD3_k127_4854872_2 - - - - 0.00006773 51.0
LYD3_k127_4856487_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 352.0
LYD3_k127_4856487_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001341 304.0
LYD3_k127_4860825_0 phospho-2-dehydro-3-deoxyheptonate aldolase K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 427.0
LYD3_k127_4860825_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 384.0
LYD3_k127_4861819_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 612.0
LYD3_k127_4861819_1 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 391.0
LYD3_k127_4861819_2 TamB, inner membrane protein subunit of TAM complex K07277,K09800 - - 0.0000000009971 73.0
LYD3_k127_4932388_0 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 443.0
LYD3_k127_4932388_1 Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB K16092 - - 0.00000000000000000001526 98.0
LYD3_k127_4932388_2 peptidase activity, acting on L-amino acid peptides - - - 0.0000000000000001344 94.0
LYD3_k127_4938467_0 Leukotriene A4 hydrolase, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 404.0
LYD3_k127_4938467_1 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 341.0
LYD3_k127_4938467_2 PFAM peptidylprolyl isomerase FKBP-type K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000008561 177.0
LYD3_k127_4938467_3 - - - - 0.000000000000000000000000000000004107 133.0
LYD3_k127_4943375_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000003443 167.0
LYD3_k127_4951594_0 ferrous iron transmembrane transporter activity K04759 - - 4.088e-224 716.0
LYD3_k127_4951594_1 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 498.0
LYD3_k127_4951594_2 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000001124 141.0
LYD3_k127_4951594_3 Pfam:DUF59 K02612 - - 0.000000000000000000000000000008451 125.0
LYD3_k127_4951594_4 histone H1-like protein - - - 0.00000000000001863 74.0
LYD3_k127_4951594_5 lipase activity K15349 - - 0.0000000007448 61.0
LYD3_k127_4952976_0 ATP-dependent helicase K03579 - 3.6.4.13 2.932e-246 785.0
LYD3_k127_4952976_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 613.0
LYD3_k127_4952976_10 NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00001275 47.0
LYD3_k127_4952976_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 467.0
LYD3_k127_4952976_3 choline dehydrogenase activity - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 400.0
LYD3_k127_4952976_4 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000009905 217.0
LYD3_k127_4952976_5 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000004532 123.0
LYD3_k127_4952976_6 - - - - 0.000000000000000000000002993 107.0
LYD3_k127_4952976_7 Helix-hairpin-helix motif - - - 0.0000000000000000003389 93.0
LYD3_k127_4952976_9 Protein of unknown function DUF116 - - - 0.000000008034 66.0
LYD3_k127_4968421_0 Amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002123 278.0
LYD3_k127_4968421_1 Plasmid maintenance system killer K07334 - - 0.0000000000000000000000000000000164 130.0
LYD3_k127_4968421_2 PFAM FecR protein K20276 - - 0.00000000000000000000000000001235 123.0
LYD3_k127_4968421_3 XRE family K21498 - - 0.00000000000000000000001747 102.0
LYD3_k127_4968421_4 Protein of unknown function (DUF3788) - - - 0.00000000000000000138 91.0
LYD3_k127_4971269_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 308.0
LYD3_k127_4971269_1 Nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000001657 100.0
LYD3_k127_4973586_0 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 366.0
LYD3_k127_4973586_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000009885 184.0
LYD3_k127_497579_0 antibiotic biosynthetic process K01434,K07116 - 3.5.1.11,3.5.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 629.0
LYD3_k127_497579_1 Pyruvate kinase, barrel domain K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 454.0
LYD3_k127_497579_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004466 285.0
LYD3_k127_497579_3 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002923 260.0
LYD3_k127_497579_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005246 228.0
LYD3_k127_497579_5 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000004833 134.0
LYD3_k127_497579_6 antisigma factor binding K04749,K06378 - - 0.00000000000000000001232 95.0
LYD3_k127_497579_8 COG0402 Cytosine deaminase and related metal-dependent hydrolases - - - 0.000000008372 64.0
LYD3_k127_4980794_0 amine dehydrogenase activity - - - 1.6e-227 737.0
LYD3_k127_4980794_1 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription this protein is involved in detoxification and protection against antimicrobial K03088 - - 0.0000000000000000000000000001397 122.0
LYD3_k127_498607_0 Glycosyl transferase family 4 K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 574.0
LYD3_k127_498607_1 undecaprenyl-phosphate glucose phosphotransferase activity K03606,K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 566.0
LYD3_k127_498607_2 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 539.0
LYD3_k127_498607_3 malonyl-CoA biosynthetic process K01962,K01963 GO:0001676,GO:0003674,GO:0003824,GO:0003989,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009987,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0032991,GO:0042759,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576,GO:1902494,GO:1990234 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 496.0
LYD3_k127_498607_4 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 419.0
LYD3_k127_498607_5 transferase activity, transferring glycosyl groups K00721,K03820 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 331.0
LYD3_k127_498607_6 transferase activity, transferring glycosyl groups K03208 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002988 285.0
LYD3_k127_498607_7 ADP-ribosylglycohydrolase - - - 0.0000000001587 63.0
LYD3_k127_498607_8 Methyltransferase FkbM family - - - 0.000000006475 63.0
LYD3_k127_4990117_1 TonB-dependent receptor - - - 1.316e-259 819.0
LYD3_k127_4990117_2 Cellobiose phosphorylase K00702 - 2.4.1.20 1.588e-258 819.0
LYD3_k127_4990117_3 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 306.0
LYD3_k127_4990880_0 quinone binding K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007865 411.0
LYD3_k127_4990880_1 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 334.0
LYD3_k127_4990880_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K02573 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000001351 242.0
LYD3_k127_4990880_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000002373 201.0
LYD3_k127_4990880_4 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000005136 160.0
LYD3_k127_4999019_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 333.0
LYD3_k127_4999019_1 PFAM asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 316.0
LYD3_k127_4999019_2 3-demethylubiquinone-9 3-O-methyltransferase activity K07011,K20444 - - 0.00000000000000000000000000000000000000000001025 171.0
LYD3_k127_4999019_3 Putative diguanylate phosphodiesterase - - - 0.0000000001006 68.0
LYD3_k127_5000660_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 550.0
LYD3_k127_5000660_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 381.0
LYD3_k127_5000660_2 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.00000005923 55.0
LYD3_k127_501612_0 POT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 366.0
LYD3_k127_501612_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591,K13421 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002599 274.0
LYD3_k127_501612_2 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000005256 253.0
LYD3_k127_501612_3 thioesterase K07107,K12500 - - 0.000000000000000000000000000000000000000000335 168.0
LYD3_k127_501612_4 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000003424 136.0
LYD3_k127_501612_5 - - - - 0.00000000000007683 70.0
LYD3_k127_5019881_0 Amidohydrolase family - - - 5.647e-196 627.0
LYD3_k127_5019881_1 Elongation factor P K02356 - - 0.000000000000000000000000000000000000001067 153.0
LYD3_k127_5019881_2 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000001549 126.0
LYD3_k127_5021882_0 single-stranded DNA 5'-3' exodeoxyribonuclease activity K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 598.0
LYD3_k127_5021882_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 473.0
LYD3_k127_5021882_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 315.0
LYD3_k127_5021882_3 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.00000000000000000000000000000000000000000000000000005613 194.0
LYD3_k127_5021882_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000002135 189.0
LYD3_k127_5021882_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000001006 186.0
LYD3_k127_5021882_6 - K07283 - - 0.0000000000000000000000000000000000000000000008991 176.0
LYD3_k127_5021882_7 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000001991 64.0
LYD3_k127_5021882_8 - K03646 - - 0.000192 52.0
LYD3_k127_502580_0 heme-copper terminal oxidase activity K02274 - 1.9.3.1 1.515e-215 676.0
LYD3_k127_502580_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 464.0
LYD3_k127_502580_2 zinc ion transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 442.0
LYD3_k127_502580_3 signal sequence binding - - - 0.000000000000000000000000000000000000000000000000000000000000001967 231.0
LYD3_k127_502580_4 Cytochrome c K07243 - - 0.000000000000000000000000000000000000000000000000001741 194.0
LYD3_k127_502580_5 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000009509 93.0
LYD3_k127_5028527_0 seryl-tRNA synthetase K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 489.0
LYD3_k127_5028527_1 (ABC) transporter K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 425.0
LYD3_k127_5028527_2 mannose-ethanolamine phosphotransferase activity K01077 GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 368.0
LYD3_k127_5028527_3 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 327.0
LYD3_k127_5028527_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 293.0
LYD3_k127_5028527_5 Dihydrouridine synthase (Dus) K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000003865 248.0
LYD3_k127_5028527_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000002852 171.0
LYD3_k127_5028527_7 pfkB family carbohydrate kinase K00847,K00852,K18478 - 2.7.1.15,2.7.1.184,2.7.1.4 0.00000000000000000000000000000000001577 148.0
LYD3_k127_5029752_0 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 376.0
LYD3_k127_5029752_1 ATP-dependent DNA helicase activity K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 377.0
LYD3_k127_5029752_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000261 281.0
LYD3_k127_5029752_3 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000001018 235.0
LYD3_k127_5029752_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000000000000000000000007917 149.0
LYD3_k127_5033283_0 Monogalactosyldiacylglycerol synthase K03429,K03715 - 2.4.1.315,2.4.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 374.0
LYD3_k127_5033283_1 Inward rectifier potassium channel K08715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001794 276.0
LYD3_k127_5033283_2 PFAM Glycosyl transferase, group 1 K12996 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000000002527 215.0
LYD3_k127_5033283_3 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000001237 159.0
LYD3_k127_5033283_4 polysaccharide deacetylase - - - 0.000000000000000000000000000000008982 145.0
LYD3_k127_5071673_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000001976 178.0
LYD3_k127_5071673_1 6-phosphogluconolactonase activity - - - 0.000000000000004329 89.0
LYD3_k127_5078737_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972,K10754 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 602.0
LYD3_k127_5078737_1 HELICc2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 336.0
LYD3_k127_5078737_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 343.0
LYD3_k127_5078737_3 regulation of translation K03530 - - 0.0000000000000000000000000006677 115.0
LYD3_k127_5078737_4 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000009178 104.0
LYD3_k127_5080675_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000001319 244.0
LYD3_k127_5080675_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000001286 206.0
LYD3_k127_5080675_2 - - - - 0.00000000000000000000000000000000000000000000000000005564 199.0
LYD3_k127_5080675_3 Heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000241 197.0
LYD3_k127_5080675_4 Polysaccharide biosynthesis C-terminal domain - - - 0.000000001969 70.0
LYD3_k127_5093755_0 Aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 4.693e-197 621.0
LYD3_k127_5093755_1 Belongs to the DapA family K21062 - 3.5.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 376.0
LYD3_k127_5093755_2 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000000000000000003462 117.0
LYD3_k127_5095173_0 Glycoside hydrolase family 38 central region K01191 - 3.2.1.24 2.68e-218 719.0
LYD3_k127_5095173_1 ABC transporter K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 499.0
LYD3_k127_5095173_2 Ribose ABC superfamily ATP binding cassette transporter, permease protein K10440 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 294.0
LYD3_k127_5095173_3 PFAM periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 294.0
LYD3_k127_5095173_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000961 280.0
LYD3_k127_5095173_5 PFAM amino acid permease-associated region K03294 - - 0.00000000000000000000000000000000000000000013 165.0
LYD3_k127_513584_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000009225 231.0
LYD3_k127_513584_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000002839 217.0
LYD3_k127_5164945_0 TonB-dependent receptor K02014 - - 3.272e-204 660.0
LYD3_k127_5164945_1 Thiamine diphosphokinase K00949 - 2.7.6.2 0.00000000000000005855 86.0
LYD3_k127_5164945_2 GGDEF domain K03413 - - 0.000000008018 62.0
LYD3_k127_5165523_0 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 442.0
LYD3_k127_5165523_1 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 343.0
LYD3_k127_517905_0 PFAM Glycosyl transferase family 2 K19003 - 2.4.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 379.0
LYD3_k127_517905_1 - - - - 0.0000000000000000000000000000952 128.0
LYD3_k127_517905_2 Transposase - - - 0.00000000000000000000000004641 111.0
LYD3_k127_5180847_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 336.0
LYD3_k127_5180847_1 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001179 253.0
LYD3_k127_5180847_2 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000007257 233.0
LYD3_k127_5180847_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000003954 198.0
LYD3_k127_5180847_4 NeuB family K03856 - 2.5.1.54 0.0000000000000000000008823 96.0
LYD3_k127_51819_0 Belongs to the glycosyl hydrolase family 6 K01179,K01183 - 3.2.1.14,3.2.1.4 4.012e-194 627.0
LYD3_k127_51819_1 symporter activity K03307 - - 0.0000000000000000000000000000000000000000000000003529 177.0
LYD3_k127_51819_2 - - - - 0.0000000000002778 72.0
LYD3_k127_5210847_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009596 276.0
LYD3_k127_5210847_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000002024 201.0
LYD3_k127_5210847_2 cell envelope organization K05807,K08309 - - 0.0000000000000000000004035 102.0
LYD3_k127_5213372_0 PFAM glycoside hydrolase family 3 K05349 - 3.2.1.21 2.155e-279 882.0
LYD3_k127_5213372_1 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 584.0
LYD3_k127_5213372_2 - - - - 0.000000000000000000001808 94.0
LYD3_k127_5219481_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000004394 222.0
LYD3_k127_5219481_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000008236 209.0
LYD3_k127_5219481_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000003398 204.0
LYD3_k127_5236110_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 6.555e-266 837.0
LYD3_k127_5236110_1 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 409.0
LYD3_k127_5236110_2 Cytochrome c K02720 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0009521,GO:0009523,GO:0009579,GO:0016020,GO:0030075,GO:0030096,GO:0032991,GO:0034357,GO:0042651,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044425,GO:0044436,GO:0044444,GO:0044459,GO:0044464,GO:0071944,GO:0098796,GO:0098797 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000963 278.0
LYD3_k127_5236110_3 rRNA binding K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000009146 121.0
LYD3_k127_5236110_4 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000007895 88.0
LYD3_k127_5243621_0 PFAM Prolyl oligopeptidase family - - - 2.135e-251 793.0
LYD3_k127_5243621_1 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 339.0
LYD3_k127_5243621_2 Exodeoxyribonuclease III - - - 0.00000000000000008135 84.0
LYD3_k127_5243621_3 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000009037 73.0
LYD3_k127_5243621_4 STAS domain - - - 0.000002107 52.0
LYD3_k127_5243621_5 Subtilase family - - - 0.00008055 46.0
LYD3_k127_5243621_6 Protein of unknown function (DUF2752) - - - 0.0000817 47.0
LYD3_k127_5251194_0 long-chain fatty acid transporting porin activity K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000001427 244.0
LYD3_k127_5251194_1 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000007072 214.0
LYD3_k127_5251194_2 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000005146 167.0
LYD3_k127_5251194_3 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000002479 138.0
LYD3_k127_5251194_4 Lysin motif - - - 0.00000000000000001044 85.0
LYD3_k127_5251194_5 - - - - 0.00000000000006224 78.0
LYD3_k127_5269853_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 503.0
LYD3_k127_5269853_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 491.0
LYD3_k127_5269853_2 Cupin domain - - - 0.000000000000000000000000006682 109.0
LYD3_k127_5295988_0 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 372.0
LYD3_k127_5295988_1 PFAM DNA polymerase B, exonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000003965 232.0
LYD3_k127_5295988_2 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000261 68.0
LYD3_k127_5329390_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 6.65e-220 692.0
LYD3_k127_5329390_1 phosphoserine phosphatase activity K07052,K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 396.0
LYD3_k127_5329390_2 Domain of unknown function (DUF4153) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 349.0
LYD3_k127_5329390_3 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000009756 195.0
LYD3_k127_5329390_4 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000001547 173.0
LYD3_k127_5329390_5 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.00000000000000000000000000000001034 133.0
LYD3_k127_5334402_0 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 333.0
LYD3_k127_5334402_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000005172 158.0
LYD3_k127_5340003_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003231 282.0
LYD3_k127_5340003_1 PFAM peptidase S58 DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000004905 265.0
LYD3_k127_5340003_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000003932 206.0
LYD3_k127_5340003_3 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.000000000000000000000000000003446 125.0
LYD3_k127_5367013_0 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 591.0
LYD3_k127_5367013_1 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000001061 194.0
LYD3_k127_5369393_0 Domain of unknown function (DUF5110) K01187 - 3.2.1.20 1.114e-216 706.0
LYD3_k127_5369393_1 Chase2 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 377.0
LYD3_k127_5369393_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000006958 234.0
LYD3_k127_5372667_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 496.0
LYD3_k127_5372667_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 399.0
LYD3_k127_5372667_2 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006929 257.0
LYD3_k127_5372667_3 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000001156 159.0
LYD3_k127_5372667_4 - - - - 0.000000000000000000000000000000000001706 148.0
LYD3_k127_5372667_5 - - - - 0.00000000000000000000000000000005967 132.0
LYD3_k127_5377489_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000009891 209.0
LYD3_k127_5377489_2 Belongs to the glycosyl hydrolase 13 family - - - 0.00000000000007886 72.0
LYD3_k127_5384690_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007018 250.0
LYD3_k127_5384690_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000001537 190.0
LYD3_k127_5384690_3 Catalyzes the dephosphorylation of D,L-glyceraldehyde 3- phosphate in vitro K07025 - - 0.000000000000008128 81.0
LYD3_k127_5387739_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 8.729e-209 672.0
LYD3_k127_5387739_1 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000005445 204.0
LYD3_k127_5387739_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000005171 194.0
LYD3_k127_5387739_3 PFAM Peptidase family M28 - - - 0.00000000000000000000000000001077 138.0
LYD3_k127_5387739_4 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000004927 93.0
LYD3_k127_5399069_0 LysM domain K08307,K12204 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 524.0
LYD3_k127_5399069_1 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 293.0
LYD3_k127_5404489_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.453e-256 813.0
LYD3_k127_5404489_1 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 629.0
LYD3_k127_5404489_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 354.0
LYD3_k127_5404489_3 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 328.0
LYD3_k127_5404489_4 Peptidase M14 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003938 274.0
LYD3_k127_5404489_5 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000005807 236.0
LYD3_k127_5404489_6 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000000000000002501 106.0
LYD3_k127_5404489_7 AntiSigma factor - - - 0.000003198 58.0
LYD3_k127_5408936_0 Domain of unknown function (DUF5127) - - - 1.055e-259 818.0
LYD3_k127_5408936_1 Oligoendopeptidase f K01283,K08602 - 3.4.15.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 459.0
LYD3_k127_5408936_10 - - - - 0.00000000000000000000000000000000000000002455 156.0
LYD3_k127_5408936_11 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000001406 151.0
LYD3_k127_5408936_12 - - - - 0.00000000000000000000000000000007329 129.0
LYD3_k127_5408936_13 diguanylate cyclase - - - 0.0000000000000000000000001984 113.0
LYD3_k127_5408936_14 Domain of unknown function (DUF1330) - - - 0.00000000000000000000007097 102.0
LYD3_k127_5408936_15 - - - - 0.0000000000000000000002521 105.0
LYD3_k127_5408936_17 OmpA family K03286 - - 0.0001375 50.0
LYD3_k127_5408936_2 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 379.0
LYD3_k127_5408936_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 372.0
LYD3_k127_5408936_4 beta-glucosidase activity K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 354.0
LYD3_k127_5408936_5 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 319.0
LYD3_k127_5408936_6 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000002268 254.0
LYD3_k127_5408936_7 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000002861 210.0
LYD3_k127_5408936_8 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000002415 184.0
LYD3_k127_5408936_9 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000002247 159.0
LYD3_k127_5437106_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 398.0
LYD3_k127_5437106_1 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000003403 230.0
LYD3_k127_5437462_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 424.0
LYD3_k127_5437462_1 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000007119 269.0
LYD3_k127_5437462_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000007743 72.0
LYD3_k127_5450618_0 Belongs to the CarB family K01955 - 6.3.5.5 6.889e-224 710.0
LYD3_k127_5450618_1 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 490.0
LYD3_k127_5450618_2 ATP-independent chaperone mediated protein folding - - - 0.000000005978 63.0
LYD3_k127_5452928_0 Histidine kinase K02480,K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000001655 243.0
LYD3_k127_5452928_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000007075 154.0
LYD3_k127_5454390_0 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 319.0
LYD3_k127_5454390_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 289.0
LYD3_k127_5454390_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003776 247.0
LYD3_k127_5454390_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000001883 165.0
LYD3_k127_5454390_4 Sensor histidine kinase, HAMP domain-containing K07644 - 2.7.13.3 0.0000000002005 63.0
LYD3_k127_5454390_5 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00002937 50.0
LYD3_k127_5469830_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 544.0
LYD3_k127_5469830_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000205 237.0
LYD3_k127_5469830_2 spore germination - - - 0.00000000000000000000000000000000000000000000006466 177.0
LYD3_k127_5492365_0 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 389.0
LYD3_k127_5492365_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000009314 174.0
LYD3_k127_5505213_0 cyclic nucleotide binding K03885,K10716 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005737 289.0
LYD3_k127_5505213_1 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000001473 224.0
LYD3_k127_5505213_2 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000007021 162.0
LYD3_k127_5505213_3 - - - - 0.0000000000000000818 81.0
LYD3_k127_5525572_0 lytic transglycosylase activity K03194 - - 0.00000000001036 76.0
LYD3_k127_5525572_1 Carbohydrate-selective porin, OprB family K07267 - - 0.0009522 42.0
LYD3_k127_5531266_0 phosphorelay signal transduction system K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 568.0
LYD3_k127_5531266_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 434.0
LYD3_k127_5531266_2 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000413 244.0
LYD3_k127_5531266_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000005842 221.0
LYD3_k127_5531266_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000001046 141.0
LYD3_k127_5542437_0 amine dehydrogenase activity K14647,K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 339.0
LYD3_k127_55770_0 response to heat K03694,K03695 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030312,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0040007,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1103.0
LYD3_k127_55913_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.368e-257 800.0
LYD3_k127_55913_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000002649 176.0
LYD3_k127_55913_2 Domain of unknown function (DUF4397) - - - 0.0002146 48.0
LYD3_k127_5624951_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009339 256.0
LYD3_k127_5624951_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001694 237.0
LYD3_k127_5624951_2 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000001309 199.0
LYD3_k127_5624951_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000004296 83.0
LYD3_k127_5624951_4 Heptosyltransferase II K02843 - - 0.0000000001486 65.0
LYD3_k127_5624951_5 Hemerythrin HHE cation binding domain - - - 0.00003616 50.0
LYD3_k127_5644852_0 Alpha-2-Macroglobulin K06894 - - 8.395e-318 1022.0
LYD3_k127_5673593_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003591 280.0
LYD3_k127_5673593_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000000000000000001178 185.0
LYD3_k127_5693102_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016465,GO:0018995,GO:0020003,GO:0023051,GO:0023056,GO:0030430,GO:0032991,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051082,GO:0061077,GO:0065007,GO:0065010,GO:0101031,GO:1901222,GO:1901224,GO:1902531,GO:1902533,GO:1990220,GO:2000535 - 5.231e-245 766.0
LYD3_k127_5693102_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002607 249.0
LYD3_k127_5693102_2 ATPase activity K01990,K13926 - - 0.000000000000000000000000000000000000000003699 159.0
LYD3_k127_5693102_3 transcriptional regulator K09017 - - 0.0000000000000000000000001239 115.0
LYD3_k127_5712155_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 398.0
LYD3_k127_5712155_1 Curli production assembly/transport component CsgG - - - 0.00004741 51.0
LYD3_k127_5715211_0 TonB-dependent receptor - - - 8.136e-264 832.0
LYD3_k127_5748136_0 Transport permease protein K01992 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 338.0
LYD3_k127_5748136_1 Conserved hypothetical protein (DUF2461) - - - 0.000000003511 60.0
LYD3_k127_5748136_2 Calcineurin-like phosphoesterase - - - 0.00001627 57.0
LYD3_k127_5748136_3 PFAM ABC-2 type transporter K01992 - - 0.000539 43.0
LYD3_k127_5770715_0 aminopeptidase activity K07004 - - 0.0000000000000000000000000000000000000000000000000000000000007051 232.0
LYD3_k127_5771629_0 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000002114 237.0
LYD3_k127_5771629_1 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000001161 217.0
LYD3_k127_5771629_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - - - 0.00000000001858 68.0
LYD3_k127_5784022_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 3.442e-196 621.0
LYD3_k127_5784022_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 525.0
LYD3_k127_5784022_2 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 464.0
LYD3_k127_5784022_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 397.0
LYD3_k127_5784022_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000001346 265.0
LYD3_k127_5784022_5 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000109 207.0
LYD3_k127_5784022_6 Cell division protein FtsQ K03589 - - 0.00000000000000001663 92.0
LYD3_k127_579053_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 489.0
LYD3_k127_5797107_0 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 354.0
LYD3_k127_5797107_1 Chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000005324 238.0
LYD3_k127_5816922_0 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000003157 161.0
LYD3_k127_5816922_1 TIGRFAM TonB family protein K03832 - - 0.000000000000000000004116 97.0
LYD3_k127_5816922_2 PFAM Tetratricopeptide repeat - - - 0.000000000007257 76.0
LYD3_k127_5830014_0 Pectate lyase K01728,K21606 - 3.2.1.202,4.2.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 426.0
LYD3_k127_5830014_1 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000001562 116.0
LYD3_k127_5837268_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 563.0
LYD3_k127_5837268_1 Major facilitator Superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 540.0
LYD3_k127_5837268_2 PFAM Uncharacterised conserved protein UCP016719 - - - 0.000000000000000000000000000000002958 131.0
LYD3_k127_5837268_3 SpoIID LytB domain protein K06381 - - 0.00000000000002691 72.0
LYD3_k127_5839892_0 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 456.0
LYD3_k127_5839892_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 303.0
LYD3_k127_5853706_0 4-Hydroxyphenylpyruvate dioxygenase - - - 1.663e-207 653.0
LYD3_k127_5853706_1 translation release factor activity K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 369.0
LYD3_k127_5853706_2 - - - - 0.00000000000000000000000000000000000000006141 156.0
LYD3_k127_5882832_0 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000000001283 206.0
LYD3_k127_5882832_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000134 163.0
LYD3_k127_5882832_2 Transcriptional regulator K07669 - - 0.000000000002846 72.0
LYD3_k127_5931516_0 Peptidase S46 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 500.0
LYD3_k127_5931516_1 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000002973 124.0
LYD3_k127_5931516_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000001324 109.0
LYD3_k127_5931516_3 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.0009916 48.0
LYD3_k127_594127_0 Metallopeptidase family M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 406.0
LYD3_k127_594127_1 unfolded protein binding K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 377.0
LYD3_k127_594127_2 PhoQ Sensor K01768,K04769,K10914 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 324.0
LYD3_k127_594127_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 298.0
LYD3_k127_594127_4 - K01992,K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005699 264.0
LYD3_k127_594127_5 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003219 261.0
LYD3_k127_594127_6 peptidyl-prolyl cis-trans isomerase activity K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000001239 237.0
LYD3_k127_594127_7 oligopeptide transport K03305 - - 0.00000000000000000000000000000000000000000000000000000000005907 209.0
LYD3_k127_5954192_0 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 406.0
LYD3_k127_5954192_1 regulation of single-species biofilm formation - GO:0008150,GO:0043900,GO:0050789,GO:0050794,GO:0065007,GO:1900190 - 0.0000000000000000000000000000000000000000000000000000000000000000002387 237.0
LYD3_k127_5954192_2 - - - - 0.0000000000000000000000000000006279 139.0
LYD3_k127_5954192_3 heat shock protein binding - - - 0.00000000000000000000000002416 109.0
LYD3_k127_5969797_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 551.0
LYD3_k127_5969797_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000005111 206.0
LYD3_k127_5992000_0 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000003459 74.0
LYD3_k127_6033984_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 508.0
LYD3_k127_6033984_1 phosphatidate cytidylyltransferase activity K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000743 233.0
LYD3_k127_6033984_2 - - - - 0.0000000000000000000000000000000001758 146.0
LYD3_k127_6033984_3 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000003206 141.0
LYD3_k127_6044613_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 445.0
LYD3_k127_6044613_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 431.0
LYD3_k127_6044613_2 carboxylic ester hydrolase activity - - - 0.00000000000001473 85.0
LYD3_k127_6065276_0 C-terminus of AA_permease K03294 - - 5.9e-237 745.0
LYD3_k127_6065276_1 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 481.0
LYD3_k127_6065276_2 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 350.0
LYD3_k127_6067252_0 Nickel-dependent hydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 584.0
LYD3_k127_6067252_1 coenzyme F420 hydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 370.0
LYD3_k127_6067252_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001318 231.0
LYD3_k127_6067252_3 PFAM Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K02823 - - 0.0000000000000000000000000000000002724 133.0
LYD3_k127_6067252_4 Hydrogenase maturation protease - - - 0.0000000000000000000000000000007541 129.0
LYD3_k127_6067252_5 Diguanylate cyclase - - - 0.00000000000000000000001035 109.0
LYD3_k127_6098262_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 388.0
LYD3_k127_6098262_1 ATP-dependent DNA helicase activity K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 405.0
LYD3_k127_6098262_2 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 328.0
LYD3_k127_6098262_3 kinase activity K02848 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 306.0
LYD3_k127_6098262_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000008121 230.0
LYD3_k127_6098262_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000003008 228.0
LYD3_k127_6098262_6 methyltransferase activity K00569 - 2.1.1.67 0.0000000000000000000000000000000000000000000000002081 183.0
LYD3_k127_6106939_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009081 406.0
LYD3_k127_6106939_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K13531 - 2.1.1.63 0.000000000000000000000000000000000000000000004172 168.0
LYD3_k127_6106939_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000009478 77.0
LYD3_k127_6118781_0 Peptidase, M16 K07263 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 8.568e-291 921.0
LYD3_k127_6118781_1 FAD linked oxidases, C-terminal domain K00104,K18930 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 545.0
LYD3_k127_6118781_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 395.0
LYD3_k127_6118781_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000007823 108.0
LYD3_k127_6133706_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000001504 216.0
LYD3_k127_6133706_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000002482 175.0
LYD3_k127_6143451_0 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 429.0
LYD3_k127_6143451_1 Mut7-C ubiquitin K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007366 246.0
LYD3_k127_6143451_2 Pfam:TPM K08988 - - 0.0000000000000000000000000000000000000000005021 165.0
LYD3_k127_6143451_3 Cupin domain K11312 - - 0.0000000000000000000000000003042 120.0
LYD3_k127_6143451_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059,K07124 - 1.1.1.100 0.000000000417 65.0
LYD3_k127_6153897_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 553.0
LYD3_k127_6153897_1 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009978 283.0
LYD3_k127_6153897_2 membrane organization K07277 - - 0.0000000000000000000000000000000000000000000000000000000000307 223.0
LYD3_k127_6153897_3 ribonuclease III activity K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000007433 196.0
LYD3_k127_6153897_4 Formiminotransferase-cyclodeaminase - - - 0.0000000000000000000000000000000000000000000000000185 186.0
LYD3_k127_6153897_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000009633 151.0
LYD3_k127_6153897_6 CoA binding domain K01740,K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.5.1.49 0.0000000000000000000000000000000000007483 144.0
LYD3_k127_6153897_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000002037 121.0
LYD3_k127_6153897_8 metal cluster binding K06940,K18475 - - 0.000000001476 61.0
LYD3_k127_6172025_0 cobalamin binding K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000006561 217.0
LYD3_k127_6172025_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000000000000000000000000000000000000004706 214.0
LYD3_k127_6172025_2 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000002299 194.0
LYD3_k127_6172025_3 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000000000000004575 140.0
LYD3_k127_6172025_4 - - - - 0.00000000000001111 79.0
LYD3_k127_6172025_5 methyltransferase activity K21310 - 2.1.1.334 0.0000000000003665 72.0
LYD3_k127_6172691_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 454.0
LYD3_k127_6172691_1 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 369.0
LYD3_k127_6172691_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000005589 76.0
LYD3_k127_6172691_11 protein secretion K03116,K03117 - - 0.000000000000007538 76.0
LYD3_k127_6172691_12 diguanylate cyclase - - - 0.0000000000001229 85.0
LYD3_k127_6172691_14 O-Antigen ligase K18814 - - 0.00000003901 66.0
LYD3_k127_6172691_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000417 365.0
LYD3_k127_6172691_3 phosphopentomutase activity K01839 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008973,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 5.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 335.0
LYD3_k127_6172691_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 330.0
LYD3_k127_6172691_5 phosphatidylcholine synthase activity K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000299 231.0
LYD3_k127_6172691_6 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000001166 219.0
LYD3_k127_6172691_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000005797 205.0
LYD3_k127_6172691_8 COG494 NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair General function prediction only K01515 - 3.6.1.13 0.00000000000000000000000000000000001027 143.0
LYD3_k127_6172691_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000007121 98.0
LYD3_k127_6180829_0 phenylalanine-tRNA ligase activity K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 436.0
LYD3_k127_6180829_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 429.0
LYD3_k127_6180829_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.00001929 46.0
LYD3_k127_6197136_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.00000000000000000000000000000000000000000000000000000000000000002053 231.0
LYD3_k127_6197136_1 COG1121 ABC-type Mn Zn transport systems ATPase component K11607,K11710 - - 0.0000000000000000000000000000000000000000000000000000000000000002046 229.0
LYD3_k127_6197136_2 PFAM phosphate acetyl butaryl transferase K00625,K13788 - 2.3.1.8 0.00000000000000000000000000000000000009694 143.0
LYD3_k127_6197136_3 ABC-type Mn2 Zn2 transport systems permease components K02075,K09816 - - 0.0000000000000000000000000000000008698 141.0
LYD3_k127_6202774_0 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003045 275.0
LYD3_k127_6202774_1 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000003179 183.0
LYD3_k127_6202774_2 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000000000000000000000000001468 153.0
LYD3_k127_6202774_3 - - - - 0.00000000000000000004093 97.0
LYD3_k127_6202774_4 PFAM DinB - - - 0.00000002746 56.0
LYD3_k127_6204012_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.091e-218 688.0
LYD3_k127_6204012_1 cyclic 2,3-diphosphoglycerate synthetase activity K05716 - - 8.144e-197 623.0
LYD3_k127_6204012_2 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 387.0
LYD3_k127_6204012_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 377.0
LYD3_k127_6204012_4 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 352.0
LYD3_k127_6204012_5 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000006112 244.0
LYD3_k127_6204012_6 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000001685 213.0
LYD3_k127_6204012_7 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000002913 203.0
LYD3_k127_6204012_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000001299 140.0
LYD3_k127_6204012_9 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00003726 47.0
LYD3_k127_6216831_0 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 1.76e-218 694.0
LYD3_k127_6216831_1 cAMP biosynthetic process K01768,K02483 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000002515 250.0
LYD3_k127_6216831_2 extracellular matrix structural constituent - - - 0.00000000000000001295 97.0
LYD3_k127_6216831_3 Anti-sigma-K factor rskA - - - 0.000007021 57.0
LYD3_k127_6238951_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 476.0
LYD3_k127_6238951_1 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 477.0
LYD3_k127_6238951_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K16881 - 2.7.7.13,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 399.0
LYD3_k127_6238951_3 COG1691 NCAIR mutase (PurE)-related K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000127 254.0
LYD3_k127_6238951_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000001303 150.0
LYD3_k127_6238951_5 PFAM Transketolase domain protein K00615 - 2.2.1.1 0.00000000000000003362 84.0
LYD3_k127_6249230_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 490.0
LYD3_k127_6249230_1 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009253 417.0
LYD3_k127_6249230_2 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 355.0
LYD3_k127_6249230_3 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000001963 208.0
LYD3_k127_6252517_0 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 434.0
LYD3_k127_6252517_1 Sigma-54 interaction domain K03405 - 6.6.1.1 0.00000000000000000000000000000000000000001669 158.0
LYD3_k127_6252517_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0004857 43.0
LYD3_k127_6254799_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 421.0
LYD3_k127_6254799_1 AMP binding - - - 0.00000000000000000000000000000000000000005771 156.0
LYD3_k127_6254799_2 Two component regulator propeller K02660,K03406 - - 0.00000000000000000000001018 106.0
LYD3_k127_6254799_3 acetyltransferase - - - 0.000000000000000000001221 97.0
LYD3_k127_6264825_0 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 477.0
LYD3_k127_6264825_1 ATP-dependent DNA helicase activity K03656,K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000001474 212.0
LYD3_k127_6264825_2 Virulence factor BrkB K07058 - - 0.000000000000001808 87.0
LYD3_k127_626504_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.116e-225 712.0
LYD3_k127_626504_1 drug transmembrane transporter activity K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 441.0
LYD3_k127_626504_2 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 436.0
LYD3_k127_626504_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 346.0
LYD3_k127_626504_4 Belongs to the 'phage' integrase family K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006239 258.0
LYD3_k127_626504_5 antisigma factor binding K04749,K06378 - - 0.0000000000000000000000000000000000000000001817 161.0
LYD3_k127_626504_6 sigma factor antagonist activity K04757 - 2.7.11.1 0.0000000000000000000000000000000000008948 145.0
LYD3_k127_626504_7 Tetratricopeptide repeat - - - 0.000000000000000001117 90.0
LYD3_k127_6278238_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 528.0
LYD3_k127_6278238_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000003394 227.0
LYD3_k127_6278238_2 glycine C-acetyltransferase activity K00639,K00652,K01176 GO:0001653,GO:0003674,GO:0003824,GO:0004888,GO:0004930,GO:0004966,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005886,GO:0005887,GO:0005929,GO:0006082,GO:0006355,GO:0006357,GO:0006520,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007200,GO:0007218,GO:0008150,GO:0008152,GO:0008188,GO:0008528,GO:0008890,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016407,GO:0016408,GO:0016453,GO:0016604,GO:0016607,GO:0016740,GO:0016746,GO:0016747,GO:0017046,GO:0019219,GO:0019222,GO:0019752,GO:0019866,GO:0023052,GO:0031090,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0033218,GO:0038023,GO:0042277,GO:0042562,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071944,GO:0080090,GO:0090663,GO:0097730,GO:0120025,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.3.1.29,2.3.1.47,3.2.1.1 0.000007971 50.0
LYD3_k127_6278238_3 Phosphopantetheine attachment site - - - 0.0002075 48.0
LYD3_k127_6312981_0 nodulation K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 576.0
LYD3_k127_6312981_1 succinyl-diaminopimelate desuccinylase activity K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008273 547.0
LYD3_k127_6312981_2 Polysaccharide biosynthesis protein K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000001627 239.0
LYD3_k127_6312981_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000001233 218.0
LYD3_k127_6312981_4 - - - - 0.0000000000000002073 80.0
LYD3_k127_6312981_5 - - - - 0.0000000000005001 74.0
LYD3_k127_6315836_0 beta-galactosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 505.0
LYD3_k127_6315836_1 GHMP kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 333.0
LYD3_k127_6316958_0 PFAM aldo keto reductase K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001219 265.0
LYD3_k127_6332250_0 (ABC) transporter K02021,K06147,K06148,K11085 - - 3.032e-215 682.0
LYD3_k127_6332250_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 427.0
LYD3_k127_6335077_0 urocanate hydratase activity K01712 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016153,GO:0016829,GO:0016835,GO:0016836,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.2.1.49 2.05e-289 896.0
LYD3_k127_6335077_1 deaminase activity K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 525.0
LYD3_k127_6335077_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000000000000001237 81.0
LYD3_k127_6335077_11 PFAM Phosphoglycerate mutase K08296 - - 0.000000000000001575 83.0
LYD3_k127_6335077_12 - - - - 0.000000126 56.0
LYD3_k127_6335077_2 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 415.0
LYD3_k127_6335077_3 Formiminotransferase domain K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 388.0
LYD3_k127_6335077_4 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 387.0
LYD3_k127_6335077_5 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 365.0
LYD3_k127_6335077_6 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005992 243.0
LYD3_k127_6335077_7 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000004932 154.0
LYD3_k127_6335077_8 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000004983 136.0
LYD3_k127_6335077_9 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000001262 109.0
LYD3_k127_6341423_0 Periplasmic binding protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 447.0
LYD3_k127_6341423_1 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 432.0
LYD3_k127_6341423_2 FGGY family of carbohydrate kinases, N-terminal domain K00875 - 2.7.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 405.0
LYD3_k127_6386605_0 Glycosyl hydrolases family 35 K12308 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 483.0
LYD3_k127_6386605_1 N-acetylglucosaminylinositol deacetylase activity K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 398.0
LYD3_k127_6386605_2 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001606 299.0
LYD3_k127_6386605_3 endo-1,4-beta-xylanase activity - - - 0.000000000000000000000000000000000000000000000000000000000003136 229.0
LYD3_k127_6386605_4 Arabinose efflux permease family protein - - - 0.00000000000000000000000000000000000000000000000000001906 206.0
LYD3_k127_6386605_5 PFAM Xylose isomerase - - - 0.000000000004625 66.0
LYD3_k127_6386605_6 PFAM Glycoside hydrolase 15-related - - - 0.00000005093 59.0
LYD3_k127_6386848_0 Belongs to the glycosyl hydrolase 31 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 417.0
LYD3_k127_6386848_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000101 197.0
LYD3_k127_6394376_0 Major Facilitator Superfamily K02445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 518.0
LYD3_k127_6394376_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000006098 232.0
LYD3_k127_6394376_2 - - - - 0.0000000000000002745 87.0
LYD3_k127_6397268_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 3.681e-234 739.0
LYD3_k127_6397268_1 Dolichol monophosphate mannose synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 436.0
LYD3_k127_6397268_10 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01489,K01838 - 3.5.4.5,5.4.2.6 0.000000000000000000000000000000001132 139.0
LYD3_k127_6397268_11 Methyltransferase domain protein - - - 0.00000001932 61.0
LYD3_k127_6397268_2 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 417.0
LYD3_k127_6397268_3 Malate/L-lactate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 400.0
LYD3_k127_6397268_4 glycogen (starch) synthase activity K00703,K00754 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 346.0
LYD3_k127_6397268_5 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 317.0
LYD3_k127_6397268_6 TIGRFAM intracellular protease, PfpI family K03152,K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000008833 231.0
LYD3_k127_6397268_7 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000002405 214.0
LYD3_k127_6397268_8 TIGRFAM Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000001133 208.0
LYD3_k127_6397268_9 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000001799 145.0
LYD3_k127_6406554_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 575.0
LYD3_k127_6406554_1 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 572.0
LYD3_k127_6406554_10 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000003097 163.0
LYD3_k127_6406554_11 Cell shape-determining protein MreC K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.000000000000000000000000000000000004774 147.0
LYD3_k127_6406554_12 rod shape-determining protein MreD K03571 - - 0.000000000000004228 81.0
LYD3_k127_6406554_13 Tetratricopeptide repeat K19673 GO:0003002,GO:0005575,GO:0005623,GO:0005929,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008589,GO:0009889,GO:0009953,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010646,GO:0010970,GO:0016043,GO:0019219,GO:0019222,GO:0021591,GO:0021798,GO:0021871,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030705,GO:0030900,GO:0030990,GO:0030991,GO:0031323,GO:0031326,GO:0031503,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035721,GO:0035735,GO:0042073,GO:0042995,GO:0043226,GO:0044085,GO:0044422,GO:0044441,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0048513,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060271,GO:0060322,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0080090,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1903506,GO:2000112,GO:2001141 - 0.0001785 55.0
LYD3_k127_6406554_2 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 553.0
LYD3_k127_6406554_3 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 310.0
LYD3_k127_6406554_4 carboxypeptidase activity K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 310.0
LYD3_k127_6406554_5 pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 298.0
LYD3_k127_6406554_6 Protein of unknown function (DUF1641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003764 282.0
LYD3_k127_6406554_7 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001234 258.0
LYD3_k127_6406554_8 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000002233 238.0
LYD3_k127_6406554_9 part of a sulfur-relay system K11179,K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000002653 168.0
LYD3_k127_6409526_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 512.0
LYD3_k127_6409526_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000003701 217.0
LYD3_k127_6410957_0 glucosamine-6-phosphate deaminase activity K01057,K02564 - 3.1.1.31,3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 363.0
LYD3_k127_6410957_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000002319 144.0
LYD3_k127_6410957_2 glucosamine-1-phosphate N-acetyltransferase activity K00973 - 2.7.7.24 0.0000000000000000000000001842 109.0
LYD3_k127_6410957_3 - - - - 0.00000004485 64.0
LYD3_k127_6411910_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 416.0
LYD3_k127_6411910_1 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 287.0
LYD3_k127_6429804_0 CTP synthase activity K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.372e-238 748.0
LYD3_k127_6429804_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 331.0
LYD3_k127_6429804_2 malic enzyme K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 285.0
LYD3_k127_6429804_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000001779 270.0
LYD3_k127_6429804_4 RibD C-terminal domain K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000001219 197.0
LYD3_k127_6429804_5 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000004743 182.0
LYD3_k127_6429804_6 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000003339 157.0
LYD3_k127_6429804_7 methyltransferase - - - 0.0000000000000000000000000000000000004878 154.0
LYD3_k127_6432216_0 ATPase involved in DNA repair K02057 - - 7.509e-279 913.0
LYD3_k127_6461959_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 482.0
LYD3_k127_6461959_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 301.0
LYD3_k127_6462429_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009239 438.0
LYD3_k127_6463013_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 584.0
LYD3_k127_6463013_1 GTP cyclohydrolase II activity K02858,K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 558.0
LYD3_k127_6463013_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 464.0
LYD3_k127_6463013_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K03624 - - 0.0000000000000000000000000000000000000000000000000000155 193.0
LYD3_k127_6463013_4 protein transport K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000001257 141.0
LYD3_k127_6463013_5 CYTH K01768,K05873 - 4.6.1.1 0.000000000000000000000000001183 119.0
LYD3_k127_6463013_6 - - - - 0.0000001659 60.0
LYD3_k127_6466550_0 metalloendopeptidase activity K01283 - 3.4.15.1 3.723e-203 644.0
LYD3_k127_6466550_1 PFAM Glycosyl Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 619.0
LYD3_k127_6466550_2 Aldo/keto reductase family K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 295.0
LYD3_k127_6466550_3 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000001122 117.0
LYD3_k127_6468638_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 1.73e-246 774.0
LYD3_k127_6468638_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 6.915e-239 747.0
LYD3_k127_6468638_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 317.0
LYD3_k127_6468638_3 queuosine metabolic process K04068,K10026 - 1.97.1.4,4.3.99.3 0.00000000000000000000000000000000000000000000001598 173.0
LYD3_k127_6483388_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 305.0
LYD3_k127_6483388_1 translation initiation factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 302.0
LYD3_k127_6483388_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003838 254.0
LYD3_k127_6483388_3 anaphase-promoting complex binding - - - 0.0000000000000001374 91.0
LYD3_k127_6493885_0 Sulfatase-modifying factor enzyme 1 - - - 9.881e-203 650.0
LYD3_k127_6524324_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 398.0
LYD3_k127_6524324_1 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000004125 94.0
LYD3_k127_6524324_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000001382 75.0
LYD3_k127_6529482_0 fibronectin type III domain protein - - - 0.00000000000000000000000000000000000007281 153.0
LYD3_k127_6529482_1 Fibronectin type 3 domain - - - 0.00000000000000000002645 104.0
LYD3_k127_6571702_0 ABC transporter - - - 2.533e-271 844.0
LYD3_k127_6571702_1 Sortilin, neurotensin receptor 3, - - - 2.158e-243 769.0
LYD3_k127_6571702_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000002461 182.0
LYD3_k127_659471_0 membrane organization K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 5.813e-258 821.0
LYD3_k127_659471_1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 1.445e-213 674.0
LYD3_k127_659471_10 unfolded protein binding K06142 - - 0.00000000000000000000000000000000000000000000001332 176.0
LYD3_k127_659471_11 YbaB/EbfC DNA-binding family K09747 - - 0.00000000000000000000000000000008277 130.0
LYD3_k127_659471_12 unfolded protein binding K06142 - - 0.000000000000000000000000005361 117.0
LYD3_k127_659471_13 - - - - 0.000000000003408 72.0
LYD3_k127_659471_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 355.0
LYD3_k127_659471_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 334.0
LYD3_k127_659471_4 transferase activity, transferring alkyl or aryl (other than methyl) groups K00806,K14215,K21273 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008834,GO:0009058,GO:0009987,GO:0016020,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0030145,GO:0033850,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046872,GO:0046914,GO:0050347,GO:0071704,GO:0071944,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.86,2.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 326.0
LYD3_k127_659471_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 316.0
LYD3_k127_659471_6 involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003294 284.0
LYD3_k127_659471_7 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000467 276.0
LYD3_k127_659471_8 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005474 294.0
LYD3_k127_659471_9 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000005167 208.0
LYD3_k127_6600182_0 peptidase K01278 - 3.4.14.5 2.825e-195 622.0
LYD3_k127_6600182_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000001702 136.0
LYD3_k127_6604304_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 417.0
LYD3_k127_6604304_1 peptidase M24 K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 367.0
LYD3_k127_6604304_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000001355 102.0
LYD3_k127_6619066_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 471.0
LYD3_k127_6619066_1 rRNA processing K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000003861 233.0
LYD3_k127_6619066_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000002912 189.0
LYD3_k127_6619066_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000001671 193.0
LYD3_k127_6624878_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 2.101e-261 822.0
LYD3_k127_6624878_1 transmembrane transport K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 318.0
LYD3_k127_6624878_2 pfam abc K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000001088 241.0
LYD3_k127_6624878_3 ATP synthesis coupled electron transport K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000002832 140.0
LYD3_k127_6624878_4 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000001504 113.0
LYD3_k127_6628676_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 468.0
LYD3_k127_6628676_1 extracellular polysaccharide biosynthetic process K01153,K07011,K16554 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000002491 201.0
LYD3_k127_66386_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004302 256.0
LYD3_k127_66386_1 - - - - 0.0000000000000000000000000000000000000002246 155.0
LYD3_k127_66386_2 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000007017 106.0
LYD3_k127_66386_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000001394 66.0
LYD3_k127_6639349_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 311.0
LYD3_k127_6639349_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004927 278.0
LYD3_k127_6639349_2 PFAM glycoside hydrolase family 2 sugar binding - - - 0.0000000000000000000000000000000000000000000000000000000000001244 219.0
LYD3_k127_6639349_3 Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose K06726 - 5.4.99.62 0.00000000000000000000000000000000001248 139.0
LYD3_k127_6639349_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000005297 115.0
LYD3_k127_6639349_5 Glycosyl hydrolases family 39 - - - 0.0000000000000000000001961 112.0
LYD3_k127_6639349_6 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000005857 105.0
LYD3_k127_6639349_7 Ureidoglycolate lyase K01483 - 4.3.2.3 0.0000000001319 71.0
LYD3_k127_677118_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 607.0
LYD3_k127_677118_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 318.0
LYD3_k127_677118_2 heme oxygenase (decyclizing) activity K21481 - 1.14.99.57 0.000133 53.0
LYD3_k127_677118_3 Methyltransferase domain - - - 0.0002061 44.0
LYD3_k127_693111_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 573.0
LYD3_k127_693111_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000002306 151.0
LYD3_k127_693111_2 radical SAM domain protein - - - 0.000000000006016 78.0
LYD3_k127_693717_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 349.0
LYD3_k127_693717_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007442 282.0
LYD3_k127_693717_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000006029 197.0
LYD3_k127_693717_3 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000003829 168.0
LYD3_k127_693717_5 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000004941 98.0
LYD3_k127_693717_6 Nucleoside recognition K06373,K06374 - - 0.0000718 50.0
LYD3_k127_706508_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1326.0
LYD3_k127_706508_1 Tricorn protease C1 domain K08676 - - 3.101e-216 679.0
LYD3_k127_706508_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000364 101.0
LYD3_k127_706508_3 TIGRFAM TonB family protein K03832 - - 0.00000000000002496 83.0
LYD3_k127_706508_4 carboxymethylenebutenolidase activity K01061,K06889 - 3.1.1.45 0.0000001319 61.0
LYD3_k127_706508_5 Integral membrane protein - - - 0.0006183 48.0
LYD3_k127_711093_0 Periplasmic copper-binding protein (NosD) - - - 0.0000000000000000000000000000003885 141.0
LYD3_k127_711093_2 peptide catabolic process - - - 0.000000002569 70.0
LYD3_k127_718506_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 372.0
LYD3_k127_718506_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000002371 195.0
LYD3_k127_718506_2 cellulose binding - - - 0.000000000000000000000000000000000000000000001162 182.0
LYD3_k127_7250_0 LacI family K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 297.0
LYD3_k127_7250_1 cellulose binding K00505 - 1.14.18.1 0.000000000000000000000000000000000000000000000000000000000000000000000000005065 270.0
LYD3_k127_749339_0 Uroporphyrinogen decarboxylase (URO-D) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 422.0
LYD3_k127_749339_1 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 324.0
LYD3_k127_750113_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 456.0
LYD3_k127_750113_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005223 280.0
LYD3_k127_750113_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000005777 59.0
LYD3_k127_755716_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.567e-203 645.0
LYD3_k127_755716_1 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 550.0
LYD3_k127_755716_10 - - - - 0.00000005281 59.0
LYD3_k127_755716_2 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 322.0
LYD3_k127_755716_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K00556,K03218,K03437,K15333 GO:0001510,GO:0002128,GO:0002938,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008757,GO:0009020,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0106050,GO:0140098,GO:0140101,GO:1901360 2.1.1.185,2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000005872 215.0
LYD3_k127_755716_4 Thiol disulfide Interchange Protein K04084 - 1.8.1.8 0.000000000000000000000000000000000000007254 153.0
LYD3_k127_755716_5 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.0000000000000000000000000000000008864 135.0
LYD3_k127_755716_6 acr, cog1993 K06199,K09137 - - 0.0000000000000000000000001737 108.0
LYD3_k127_755716_8 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.000000000000000000009764 96.0
LYD3_k127_755716_9 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000004498 89.0
LYD3_k127_765519_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 470.0
LYD3_k127_765519_1 cellulase activity K06882 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002215 279.0
LYD3_k127_765519_2 Belongs to the ATCase OTCase family K00608,K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000001242 152.0
LYD3_k127_765519_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000002686 99.0
LYD3_k127_769230_0 radical SAM domain protein K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 488.0
LYD3_k127_769230_1 cobalamin-transporting ATPase activity K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000002568 224.0
LYD3_k127_769230_2 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000000000000000002813 221.0
LYD3_k127_769230_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.0000000000000000000000000006422 127.0
LYD3_k127_769808_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 400.0
LYD3_k127_769808_1 PHP domain protein K01624,K07053 - 3.1.3.97,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003061 282.0
LYD3_k127_769808_2 cyclic nucleotide binding K01420,K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005385 267.0
LYD3_k127_769808_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000148 205.0
LYD3_k127_769808_4 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000001111 123.0
LYD3_k127_769808_5 Protein of unknown function (DUF3276) - - - 0.000000000000000000000001477 107.0
LYD3_k127_769808_6 ATP hydrolysis coupled proton transport - - - 0.0000000000000000001703 103.0
LYD3_k127_777235_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000007406 229.0
LYD3_k127_777235_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000004579 226.0
LYD3_k127_777235_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000017 98.0
LYD3_k127_777235_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000006856 89.0
LYD3_k127_782658_0 SMART helicase c2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001216 252.0
LYD3_k127_782658_1 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000004076 223.0
LYD3_k127_782658_2 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.000000000000000000000000000000004157 134.0
LYD3_k127_782658_3 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000354 109.0
LYD3_k127_788937_0 Putative glucoamylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 531.0
LYD3_k127_788937_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 431.0
LYD3_k127_788937_2 PFAM Glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000000000000000002579 216.0
LYD3_k127_788937_3 Subtilase family - - - 0.000000000000000000003569 109.0
LYD3_k127_796319_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007999 517.0
LYD3_k127_796319_1 - - - - 0.0000000000000000000000000000005507 134.0
LYD3_k127_796319_2 PFAM Peptidase family M28 - - - 0.00000008862 59.0
LYD3_k127_799738_0 Sodium:solute symporter family - - - 2.485e-302 940.0
LYD3_k127_799738_1 Belongs to the GHMP kinase family K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 371.0
LYD3_k127_799738_2 MobA-like NTP transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009144 252.0
LYD3_k127_799738_3 Transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000001319 248.0
LYD3_k127_799738_4 Putative esterase - - - 0.00000000000882 72.0
LYD3_k127_799738_5 acetyltransferase involved in intracellular survival and related acetyltransferases - - - 0.00000000005419 74.0
LYD3_k127_811534_0 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 598.0
LYD3_k127_811534_1 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 460.0
LYD3_k127_811534_2 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000002672 265.0
LYD3_k127_811534_3 Protein of unknown function (DUF3592) - - - 0.00000000000000000000000000000000000000000000000000000000000000001467 242.0
LYD3_k127_811534_4 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000004014 210.0
LYD3_k127_811534_5 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000001378 79.0
LYD3_k127_819004_0 protein secretion K20276 - - 0.000000000000000000000000000001643 136.0
LYD3_k127_819004_1 - K02172 - - 0.0000000000000000000000000001947 133.0
LYD3_k127_819004_2 Prolyl oligopeptidase family - - - 0.0000000002455 74.0
LYD3_k127_843266_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 544.0
LYD3_k127_843266_1 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 425.0
LYD3_k127_843266_2 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 376.0
LYD3_k127_843266_3 C4-dicarboxylate anaerobic carrier - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 353.0
LYD3_k127_843266_4 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 343.0
LYD3_k127_843266_5 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001297 290.0
LYD3_k127_843266_6 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000004927 262.0
LYD3_k127_843266_7 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000001011 206.0
LYD3_k127_843266_8 Chalcone isomerase-like - - - 0.00000000000000000000000000000001233 138.0
LYD3_k127_883911_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 348.0
LYD3_k127_890899_0 Belongs to the xylose isomerase family K01805 - 5.3.1.5 7.006e-212 668.0
LYD3_k127_890899_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 402.0
LYD3_k127_890899_2 Periplasmic binding protein domain K10543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007356 307.0
LYD3_k127_890899_3 Branched-chain amino acid transport system / permease component K10544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001443 260.0
LYD3_k127_890899_4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000002036 259.0
LYD3_k127_890899_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000007388 97.0
LYD3_k127_890899_6 hydrolase activity, hydrolyzing O-glycosyl compounds K01337 - 3.4.21.50 0.000000000001239 81.0
LYD3_k127_910643_0 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 370.0
LYD3_k127_910643_1 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001008 271.0
LYD3_k127_910643_2 ATPase activity K01990,K13926 - - 0.00000000000000000000000000000000000000000000000000000000005101 209.0
LYD3_k127_910643_3 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000649 217.0
LYD3_k127_941244_0 - - - - 7.968e-288 898.0
LYD3_k127_943750_1 TonB-dependent receptor - - - 0.000000000118 62.0
LYD3_k127_946183_0 Glycoside hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 424.0
LYD3_k127_946183_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000001293 198.0
LYD3_k127_948579_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 319.0
LYD3_k127_948579_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001241 246.0
LYD3_k127_948579_2 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000001462 178.0
LYD3_k127_948579_3 haloacid dehalogenase-like hydrolase - - - 0.00000000000003469 84.0
LYD3_k127_954672_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 312.0
LYD3_k127_964714_0 protein transport across the cell outer membrane K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 364.0
LYD3_k127_964714_1 - - - - 0.0000000000000000000000000002346 119.0
LYD3_k127_964714_2 - - - - 0.0000000000000002649 83.0
LYD3_k127_982152_0 HlyD family secretion protein K03585 - - 0.0000000000000000000000000000000000000000000000000000000006647 214.0
LYD3_k127_982152_1 SnoaL-like domain - - - 0.000000000000000000000007615 108.0
LYD3_k127_982152_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000601 43.0
LYD3_k127_988103_0 Peptidase family M28 - - - 1.13e-200 639.0
LYD3_k127_988103_1 GTP binding K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 503.0
LYD3_k127_988103_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000006679 132.0