LYD3_k127_1010512_0
4Fe-4S binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000003357
224.0
View
LYD3_k127_1010512_1
Transcriptional regulator
-
-
-
0.00000001343
60.0
View
LYD3_k127_102986_0
Belongs to the universal ribosomal protein uS9 family
K02996
-
-
0.00000000000000000000000000000000000001373
148.0
View
LYD3_k127_102986_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03058
GO:0000428,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008270,GO:0030880,GO:0032991,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0061695,GO:1902494,GO:1990234
2.7.7.6
0.00000000000000000000007564
99.0
View
LYD3_k127_1148379_0
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01703
-
4.2.1.33,4.2.1.35
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953
433.0
View
LYD3_k127_1148379_1
Isocitrate isopropylmalate dehydrogenase
K00052
-
1.1.1.85
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428
391.0
View
LYD3_k127_1148379_2
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01704
-
4.2.1.33,4.2.1.35
0.00000000000000000000000000000000000000000000000000000008223
201.0
View
LYD3_k127_1148379_3
Acetolactate synthase, small subunit
K01653
-
2.2.1.6
0.0000000000000000000000000002069
117.0
View
LYD3_k127_1148379_4
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01703,K20452
-
4.2.1.33,4.2.1.35,4.2.1.85
0.000000000000000039
81.0
View
LYD3_k127_11956_0
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
K17870
-
1.6.3.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175
353.0
View
LYD3_k127_11956_1
Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
K02437
GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576
-
0.0000000000000000000000000000000000213
139.0
View
LYD3_k127_11956_2
Ferritin-like domain
K03594
-
1.16.3.1
0.00000001108
57.0
View
LYD3_k127_1196825_0
Binds the lower part of the 30S subunit head
K02982
-
-
0.0000000000000000000000000000000000000000000000000000000000001542
220.0
View
LYD3_k127_1196825_1
Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
K02874
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000000000000000000000000000002428
179.0
View
LYD3_k127_1196825_2
Located at the polypeptide exit tunnel on the outside of the subunit
K02895
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000002094
146.0
View
LYD3_k127_1196825_3
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
K02961
-
-
0.0000000000000000000000000000000001247
135.0
View
LYD3_k127_1196825_4
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
K02890
-
-
0.000000000000000000000000000006971
122.0
View
LYD3_k127_1196825_5
Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends
K03538
-
3.1.26.5
0.0000000000000000000001166
100.0
View
LYD3_k127_1196825_6
Belongs to the universal ribosomal protein uL29 family
K02904
-
-
0.000000003151
61.0
View
LYD3_k127_1238327_0
Catalyzes the conversion of dihydroorotate to orotate
K17828
-
1.3.1.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006195
293.0
View
LYD3_k127_1238327_1
Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
K02823
-
-
0.0000000000000000000000000000000000000000000000000000000004763
211.0
View
LYD3_k127_1238327_2
CBS domain
-
-
-
0.00000000000000000000000000000000000000000000000000000876
204.0
View
LYD3_k127_1238327_3
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
K00950
-
2.7.6.3
0.0000000000000000000000000000000000000001484
155.0
View
LYD3_k127_1238327_4
PFAM Glycosyl transferase family 2
K00721
-
2.4.1.83
0.000000000000000000000000000000000000004087
154.0
View
LYD3_k127_1238327_5
Converts GTP to 7,8-dihydroneopterin triphosphate
K09007
-
3.5.4.16
0.000000000000000000000000000000003292
139.0
View
LYD3_k127_1238327_6
PFAM 6-pyruvoyl tetrahydropterin
K01737
-
4.1.2.50,4.2.3.12
0.0000000000000000000000000002046
118.0
View
LYD3_k127_1238327_7
Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
K01633
-
1.13.11.81,4.1.2.25,5.1.99.8
0.0000000005062
66.0
View
LYD3_k127_1238327_8
Transcriptional regulator
-
-
-
0.0000004241
55.0
View
LYD3_k127_1268116_0
PFAM chaperonin Cpn60 TCP-1
K22447
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0042802,GO:0044183,GO:0051082,GO:0061077
-
2.656e-207
658.0
View
LYD3_k127_1299100_0
phosphoglycerate mutase
K15635
-
5.4.2.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013
410.0
View
LYD3_k127_1299100_1
Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P)
K09733
-
4.2.3.153
0.000000000000000000000000000000000000000000000000000000000000000000000000000002525
268.0
View
LYD3_k127_1299100_2
H4MPT-linked C1 transfer pathway protein
K07072
-
2.5.1.131
0.0000000000000000000000000000000000000000000000000000000000000000000001232
252.0
View
LYD3_k127_1299100_3
Pfam ATP-grasp domain
K06914
-
6.3.4.24
0.0000000000000000000000000000000000000000000000000000008312
207.0
View
LYD3_k127_1299100_4
PFAM Aspartate glutamate uridylate kinase
K07144
-
2.7.4.31
0.00000000000000000000000000000000000000000004892
169.0
View
LYD3_k127_1300491_0
DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks
K03726
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162
588.0
View
LYD3_k127_1300491_1
Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
K11717
-
2.8.1.7,4.4.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048
464.0
View
LYD3_k127_1300491_2
Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
K01756
-
4.3.2.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299
445.0
View
LYD3_k127_1300491_3
Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins
K04487
-
2.8.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542
426.0
View
LYD3_k127_1300491_4
Bacterial transferase hexapeptide (six repeats)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000003447
222.0
View
LYD3_k127_1300491_5
PFAM Glycosyl transferase, group 1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000001972
231.0
View
LYD3_k127_1300491_6
Suf system fes assembly protein
K04488,K11717
-
2.8.1.7,4.4.1.16
0.0000000000000000000000000000000000000000000000004236
180.0
View
LYD3_k127_1300491_7
TIGRFAM methyltransferase FkbM family
-
-
-
0.0000000000000000000000000000000028
141.0
View
LYD3_k127_1300491_8
Glycosyl transferase family 2
-
-
-
0.000000005631
67.0
View
LYD3_k127_1300491_9
TIGRFAM asparagine synthase (glutamine-hydrolyzing)
K01953
-
6.3.5.4
0.0004013
49.0
View
LYD3_k127_1303190_0
MGS-like domain
K01955
-
6.3.5.5
0.0
1191.0
View
LYD3_k127_1303190_1
Belongs to the CarA family
K01956
-
6.3.5.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202
363.0
View
LYD3_k127_1303190_2
Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids
K11645
-
4.1.2.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006847
282.0
View
LYD3_k127_1303190_3
Belongs to the aspartokinase family
K00928
-
2.7.2.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005309
287.0
View
LYD3_k127_1303190_4
Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis
K11646
-
1.4.1.24
0.000000000000000000000000000000000000000000000000000000000000000000000000000000392
275.0
View
LYD3_k127_1303190_5
AAA domain, putative AbiEii toxin, Type IV TA system
K01990
-
-
0.000000000000000000000000000000000000000000000000000000000003787
220.0
View
LYD3_k127_1303190_6
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
K00014
GO:0003674,GO:0003824,GO:0004764,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0055114,GO:0071704,GO:1901576,GO:1901615
1.1.1.25
0.000000000000000000000000000000000000000000000000002694
188.0
View
LYD3_k127_1303190_7
Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
K03785
-
4.2.1.10
0.000000000000000000000000009612
118.0
View
LYD3_k127_1305494_0
ATPases associated with a variety of cellular activities
K02003
-
-
0.000000000000000000000000000000000000000000000000000000000000000000004065
242.0
View
LYD3_k127_1305494_1
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
-
2.7.4.22
0.0000000000000000000000000000000000000000000009763
173.0
View
LYD3_k127_1305494_2
COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
K01247
-
3.2.2.21
0.00000000000000000000000000000000000000000005649
165.0
View
LYD3_k127_1305494_3
MacB-like periplasmic core domain
K02004
-
-
0.00000645
52.0
View
LYD3_k127_134677_0
Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP
K01974
GO:0003674,GO:0003824,GO:0003963,GO:0009975,GO:0016874,GO:0016886,GO:0140098
6.5.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000312
270.0
View
LYD3_k127_134677_1
Acylphosphatase
K01512
-
3.6.1.7
0.000000000000000000000000002829
113.0
View
LYD3_k127_134677_2
Met-10+ like-protein
K15429
GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.1.1.228
0.000000002832
63.0
View
LYD3_k127_1348663_0
Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing
K00197
-
2.1.1.245
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167
512.0
View
LYD3_k127_1348663_1
Formylmethanofuran-tetrahydromethanopterin formyltransferase
K00672
-
2.3.1.101
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279
394.0
View
LYD3_k127_1348663_2
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666
375.0
View
LYD3_k127_1348663_3
Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
K00764
-
2.4.2.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213
325.0
View
LYD3_k127_1348663_4
Belongs to the carbohydrate kinase PfkB family
K00852
-
2.7.1.15
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249
313.0
View
LYD3_k127_1348663_5
Protein of unknown function (DUF2961)
K14109
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116
313.0
View
LYD3_k127_1348663_6
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001001
282.0
View
LYD3_k127_1348663_7
PFAM Phosphoribosylglycinamide synthetase
K01945
-
6.3.4.13
0.0000000000000000000000000000000000000000000000000000000000000000000002681
256.0
View
LYD3_k127_1348663_8
Glyoxalase bleomycin resistance protein dioxygenase
K06996
-
-
0.0000000000000000000001197
102.0
View
LYD3_k127_1366676_0
Belongs to the class-II aminoacyl-tRNA synthetase family
K01868
-
6.1.1.3
1.496e-223
709.0
View
LYD3_k127_1366676_1
Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
K00826
-
2.6.1.42
0.000000000000000000000000000000000000000000000001219
176.0
View
LYD3_k127_1366676_2
PFAM PfkB
-
-
-
0.00000000000000000000000000003438
128.0
View
LYD3_k127_1366676_3
-
-
-
-
0.00000000002243
66.0
View
LYD3_k127_1399023_0
PFAM chaperonin Cpn60 TCP-1
K22447
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0042802,GO:0044183,GO:0051082,GO:0061077
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001317
262.0
View
LYD3_k127_1399023_1
xanthine phosphoribosyltransferase activity
K00769,K07101
-
2.4.2.22
0.0000000000000000000000000000000000000000000001414
174.0
View
LYD3_k127_1399023_2
THUMP domain
K06963
-
-
0.00000000000000000000000000000001639
133.0
View
LYD3_k127_1399023_3
KEOPS complex Cgi121-like subunit
K09119
-
-
0.0000000000002581
77.0
View
LYD3_k127_140305_0
Cation transporter/ATPase, N-terminus
K01531,K01535,K01537,K12952
-
3.6.3.2,3.6.3.6,3.6.3.8
1.532e-217
703.0
View
LYD3_k127_140305_1
Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA
K03265
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511
387.0
View
LYD3_k127_140305_2
DNA Topoisomerase I (eukaryota)
K03163
-
5.99.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164
365.0
View
LYD3_k127_140305_3
Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5- formyl-H(4)MPT) and methanofuran (MFR)
K00672
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
2.3.1.101
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001628
297.0
View
LYD3_k127_140305_4
Beta-galactosidase
-
-
-
0.00000000000000000000000005445
119.0
View
LYD3_k127_140305_5
-
-
-
-
0.0000000000000000000002012
101.0
View
LYD3_k127_140305_6
YCII-related domain
-
-
-
0.0000000001133
63.0
View
LYD3_k127_140305_7
Belongs to the UPF0235 family
K09131
-
-
0.0002902
47.0
View
LYD3_k127_15169_0
Conserved hypothetical ATP binding protein
K06883
-
-
0.0000000000000000000000000000000000000000000000000000000000000004003
229.0
View
LYD3_k127_15169_1
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
K00789
GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464
2.5.1.6
0.0000000000000000000000000000000000000000000000000000000001397
207.0
View
LYD3_k127_15169_2
PFAM Endoribonuclease L-PSP
K09022
-
3.5.99.10
0.0000000000000000000000000000000000001889
144.0
View
LYD3_k127_15169_3
Domain of unknown function (DUF4443)
-
-
-
0.0000000000000000000000000006093
121.0
View
LYD3_k127_1539499_0
Belongs to the LarC family
K09121
-
4.99.1.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147
359.0
View
LYD3_k127_1539499_1
1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
K06898
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222
297.0
View
LYD3_k127_1539499_2
Queuosine biosynthesis protein QueC
K06864
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003661
273.0
View
LYD3_k127_1553645_0
-
-
-
-
0.00000000000000000000000004844
109.0
View
LYD3_k127_1553645_1
4Fe-4S single cluster domain
-
-
-
0.0000000000000000000000002192
115.0
View
LYD3_k127_1553645_2
NHL repeat-containing protein
-
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009416,GO:0009507,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0010196,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:1990066
-
0.00000606
50.0
View
LYD3_k127_155459_0
Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
K01733
GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363
4.2.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417
517.0
View
LYD3_k127_155459_1
Belongs to the aspartokinase family
K00928
-
2.7.2.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113
464.0
View
LYD3_k127_155459_2
homoserine dehydrogenase
K00003
-
1.1.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174
366.0
View
LYD3_k127_155459_3
Peptidase family M50
-
-
-
0.0000000000000000000000000000000000000000000000000000006358
209.0
View
LYD3_k127_155459_4
Domain of unknown function (DUF3786)
-
-
-
0.000000000000000000000002794
109.0
View
LYD3_k127_155459_5
response regulator, receiver
K07669
-
-
0.00000000000000000000288
97.0
View
LYD3_k127_155459_6
-
-
-
-
0.000000000002198
74.0
View
LYD3_k127_155459_7
deoxyhypusine monooxygenase activity
-
-
-
0.000801
49.0
View
LYD3_k127_1576393_0
Phosphofructokinase
K00850
-
2.7.1.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206
402.0
View
LYD3_k127_1576393_1
Lysylphosphatidylglycerol synthase TM region
K07027
-
-
0.00000000000000000000000000004856
130.0
View
LYD3_k127_1576393_2
Acetyltransferase (GNAT) domain
-
-
-
0.000008418
55.0
View
LYD3_k127_1582699_0
Porphyromonas-type peptidyl-arginine deiminase
K10536
-
3.5.3.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197
411.0
View
LYD3_k127_1582699_1
PFAM Pre-mRNA processing ribonucleoprotein, binding
K14564
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484
341.0
View
LYD3_k127_1582699_2
PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
K12251
-
3.5.1.53
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352
299.0
View
LYD3_k127_1582699_3
Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA
K04795
GO:0000154,GO:0000494,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008213,GO:0008276,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016074,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0022613,GO:0031123,GO:0031126,GO:0031167,GO:0032259,GO:0033967,GO:0034470,GO:0034641,GO:0034660,GO:0034963,GO:0036009,GO:0036211,GO:0042054,GO:0042254,GO:0043144,GO:0043170,GO:0043412,GO:0043414,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0051276,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140096,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1901564,GO:1990258,GO:1990259
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000001086
273.0
View
LYD3_k127_1582699_4
helix_turn_helix, Arsenical Resistance Operon Repressor
K03892
-
-
0.0000000000000000000001149
102.0
View
LYD3_k127_1582699_5
HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
-
-
-
0.00000000001318
67.0
View
LYD3_k127_1582699_6
OsmC-like protein
-
-
-
0.0001428
50.0
View
LYD3_k127_1585677_0
AIR synthase related protein, N-terminal domain
K01933,K11788
GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.3.1,6.3.4.13
0.00000000000000000000000000000000000000000000000000212
194.0
View
LYD3_k127_1585677_1
Predicted nucleotide-binding protein containing TIR-like domain
-
-
-
0.000000000000000000000000000000001922
140.0
View
LYD3_k127_15931_0
synthetase (ADP forming), alpha
K01905,K09181,K22224
GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0032459,GO:0032462,GO:0034212,GO:0036211,GO:0043170,GO:0043254,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052858,GO:0061733,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:1901564
6.2.1.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833
344.0
View
LYD3_k127_15931_1
Fe-S-cluster oxidoreductase
K06940
-
-
0.000000006422
61.0
View
LYD3_k127_1655411_0
Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
K05601
-
1.7.99.1
5.403e-229
720.0
View
LYD3_k127_1655411_1
PFAM Rh family protein ammonium transporter
K03320
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489
430.0
View
LYD3_k127_1655411_2
TIGRFAM Ammonium transporter
K03320
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445
403.0
View
LYD3_k127_1655411_3
PFAM NADPH-dependent FMN reductase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000125
272.0
View
LYD3_k127_1655411_4
lipolytic protein G-D-S-L family
K00077
-
1.1.1.169
0.0000000000000000000000000000000000001484
149.0
View
LYD3_k127_1655411_5
Acyltransferase family
-
GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008374,GO:0009058,GO:0009059,GO:0009246,GO:0009987,GO:0016020,GO:0016051,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046378,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576
-
0.0000000000000000000000000000000000004535
151.0
View
LYD3_k127_1667203_0
peptidase M42 family protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239
363.0
View
LYD3_k127_1667203_1
Trypsin-like serine protease with C-terminal PDZ domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001948
292.0
View
LYD3_k127_1667203_10
Transcriptional regulator
K07108
-
-
0.0000000000003581
74.0
View
LYD3_k127_1667203_2
Radical SAM domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001427
278.0
View
LYD3_k127_1667203_3
membrane
-
-
-
0.000000000000000000000000000000000000000000000000000000000001964
218.0
View
LYD3_k127_1667203_4
PFAM CoA-binding domain protein
K06929
-
-
0.00000000000000000000000000000000000001951
148.0
View
LYD3_k127_1667203_5
transferase activity, transferring glycosyl groups
-
-
-
0.0000000000000000000000000221
114.0
View
LYD3_k127_1667203_6
Flavodoxin
-
-
-
0.000000000000000000000002473
108.0
View
LYD3_k127_1667203_7
general stress protein B in uncultured methanogenic archaeon (Q0W564)
-
-
-
0.00000000000000000000008724
104.0
View
LYD3_k127_1667203_8
general stress protein B in uncultured methanogenic archaeon (Q0W564)
-
-
-
0.00000000000000000005375
90.0
View
LYD3_k127_1667203_9
Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently
-
-
-
0.00000000000003872
76.0
View
LYD3_k127_1764507_0
Belongs to the peptidase S16 family
-
-
-
3.958e-306
957.0
View
LYD3_k127_1764507_1
Ferrous iron transport protein B
K04759
-
-
8.286e-249
784.0
View
LYD3_k127_1764507_2
D-isomer specific 2-hydroxyacid dehydrogenase catalytic region
K00058
-
1.1.1.399,1.1.1.95
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776
389.0
View
LYD3_k127_1764507_3
Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000846
388.0
View
LYD3_k127_1764507_4
Iron dependent
K03709
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002695
285.0
View
LYD3_k127_1764507_5
Diphthamide synthase
K06927
-
6.3.1.14
0.000000000000000000000000000000000000000000000000000000000000000000000000004803
259.0
View
LYD3_k127_1764507_6
PFAM Glutamine amidotransferase class-I
-
-
-
0.00000000000000000000000000000000000449
143.0
View
LYD3_k127_1764507_7
Uncharacterized conserved protein (DUF2196)
-
-
-
0.00000000000000000006252
91.0
View
LYD3_k127_1778127_0
DEAD DEAH box helicase domain protein
K03724
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129
310.0
View
LYD3_k127_1778127_1
General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation
K03120
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000007698
255.0
View
LYD3_k127_1778127_2
Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
K00762
-
2.4.2.10
0.0000000000000000000000000000000000000000002471
166.0
View
LYD3_k127_1778127_3
Belongs to the UPF0173 family
-
-
-
0.000000000003233
75.0
View
LYD3_k127_1778127_4
Signal peptidase
K13280
-
3.4.21.89
0.00000726
56.0
View
LYD3_k127_1778127_5
-
-
-
-
0.0001727
45.0
View
LYD3_k127_1788449_0
PFAM Thiamine pyrophosphate
K00170
-
1.2.7.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439
386.0
View
LYD3_k127_1788449_1
PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein
K00169
-
1.2.7.1
0.000000000000000000000000000000000000000000000000001111
188.0
View
LYD3_k127_1788449_2
PFAM aminoacyl-tRNA synthetase class Ib
K01867
-
6.1.1.2
0.0000000000000000000000006156
107.0
View
LYD3_k127_1807533_0
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
K09759
-
6.1.1.23
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367
449.0
View
LYD3_k127_1807533_1
Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
K01714
-
4.3.3.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413
409.0
View
LYD3_k127_1807533_10
Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes
K03622
-
-
0.000000000000000000000002608
104.0
View
LYD3_k127_1807533_11
Transcription elongation factor
-
-
-
0.0000000000000000000006957
102.0
View
LYD3_k127_1807533_12
binds to the 23S rRNA
K02896
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904
-
0.00000000000000002599
83.0
View
LYD3_k127_1807533_13
RNA-binding protein involved in rRNA processing
K07569
-
-
0.00000000001338
68.0
View
LYD3_k127_1807533_14
Belongs to the eukaryotic ribosomal protein eL40 family
K02927
-
-
0.0000000009091
61.0
View
LYD3_k127_1807533_2
Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB)
K03124
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279
397.0
View
LYD3_k127_1807533_3
PFAM Semialdehyde dehydrogenase NAD - binding
K00133
-
1.2.1.11
0.000000000000000000000000000000000000000000000000000000000000006461
222.0
View
LYD3_k127_1807533_4
Protein of unknown function DUF116
K09729
-
-
0.00000000000000000000000000000000000000000000000000000000000009982
218.0
View
LYD3_k127_1807533_5
TIGRFAM asparagine synthase (glutamine-hydrolyzing)
K01953
-
6.3.5.4
0.00000000000000000000000000000000000000000000000000003139
199.0
View
LYD3_k127_1807533_6
Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs
K02936
GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000001591
164.0
View
LYD3_k127_1807533_7
Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
K00215
GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576
1.17.1.8
0.00000000000000000000000000000000000000000007823
170.0
View
LYD3_k127_1807533_8
helix_turn_helix, cAMP Regulatory protein
-
-
-
0.000000000000000000000000000000000000002628
151.0
View
LYD3_k127_1807533_9
Belongs to the eukaryotic ribosomal protein eS28 family
K02979
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
-
0.000000000000000000000001323
104.0
View
LYD3_k127_1832971_0
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
0.000000000000000000000000000000000000000000000000000000000000000000004715
251.0
View
LYD3_k127_1832971_1
Radical SAM domain protein
K01012
-
2.8.1.6
0.0000000000000000000000000000000000000000000000000000000000000009132
224.0
View
LYD3_k127_1848344_0
PFAM Thiamine pyrophosphate enzyme, C-terminal TPP-binding
K00158
-
1.2.3.3
1.93e-260
813.0
View
LYD3_k127_1848344_1
PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase
K00266
-
1.4.1.13,1.4.1.14
6.959e-198
627.0
View
LYD3_k127_1848344_10
PFAM Glycosyl transferase family 2
K07027
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000002944
269.0
View
LYD3_k127_1848344_11
Involved in the catabolism of quinolinic acid (QA)
K00767
-
2.4.2.19
0.0000000000000000000000000000000000000000000000000000000000000000000000000001548
265.0
View
LYD3_k127_1848344_12
AMMECR1
K09141
-
-
0.000000000000000000000000000000000000000000000000000000000000000000009467
239.0
View
LYD3_k127_1848344_13
Belongs to the eIF-2B alpha beta delta subunits family
K18237
GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.3.1.29
0.000000000000000000000000000000000000000000000000000000000000000003876
236.0
View
LYD3_k127_1848344_14
Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
K02427
GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360
2.1.1.166
0.00000000000000000000000000000000000000000000000000000000008282
210.0
View
LYD3_k127_1848344_15
serine threonine protein kinase
K08851
GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360
2.7.11.1
0.0000000000000000000000000000000000000000000000000000000001366
210.0
View
LYD3_k127_1848344_16
Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation
K03433
-
3.4.25.1
0.0000000000000000000000000000000000000000000000000000001056
204.0
View
LYD3_k127_1848344_17
nicotinamide-nucleotide adenylyltransferase
K00952
-
2.7.7.1
0.00000000000000000000000000000000000000000000000002999
186.0
View
LYD3_k127_1848344_18
Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains
K17830
-
1.3.1.101,1.3.7.11
0.0000000000000000000000000000000000000000000000003575
192.0
View
LYD3_k127_1848344_19
Belongs to the HAM1 NTPase family
K02428
-
3.6.1.66
0.0000000000000000000000000000000000000000000003939
173.0
View
LYD3_k127_1848344_2
Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase
K01601
-
4.1.1.39
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361
467.0
View
LYD3_k127_1848344_21
ribosomal protein S15
K02956
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000002461
153.0
View
LYD3_k127_1848344_22
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K04794
-
3.1.1.29
0.0000000000000000000000000000000000002675
145.0
View
LYD3_k127_1848344_23
COG1522 Transcriptional regulators
-
-
-
0.000000000000000000000003116
107.0
View
LYD3_k127_1848344_24
Glycosyl transferase family 1
-
-
-
0.00000000000000000000003993
112.0
View
LYD3_k127_1848344_25
Nuclease-related domain
-
-
-
0.000000000000000001324
94.0
View
LYD3_k127_1848344_26
GH3 auxin-responsive promoter
-
-
-
0.00000000000000005141
93.0
View
LYD3_k127_1848344_27
Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
K00567
-
2.1.1.63
0.0000000000001412
79.0
View
LYD3_k127_1848344_28
PFAM glycosyl transferase family 39
K00728
-
2.4.1.109
0.0000000000002517
74.0
View
LYD3_k127_1848344_29
Cell division protein 48 (CDC48), domain 2
K13525
-
-
0.00000008472
55.0
View
LYD3_k127_1848344_3
Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO
K18931
-
2.4.2.57
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998
457.0
View
LYD3_k127_1848344_30
-
-
-
-
0.00000009992
56.0
View
LYD3_k127_1848344_31
deoxyhypusine monooxygenase activity
-
-
-
0.0000004957
57.0
View
LYD3_k127_1848344_32
-
-
-
-
0.0002179
51.0
View
LYD3_k127_1848344_4
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function
K15904
-
2.3.1.234,2.7.11.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357
383.0
View
LYD3_k127_1848344_5
Mitochondrial biogenesis AIM24
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105
337.0
View
LYD3_k127_1848344_6
PFAM oxidoreductase FAD NAD(P)-binding domain protein
K00528
-
1.18.1.2,1.19.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234
336.0
View
LYD3_k127_1848344_7
PFAM phosphoesterase, RecJ domain protein
K07463
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013
325.0
View
LYD3_k127_1848344_8
Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs
K06176
-
5.4.99.27
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336
315.0
View
LYD3_k127_1848344_9
Thioredoxin reductase
K00384,K03387
-
1.8.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001723
287.0
View
LYD3_k127_1858155_0
Belongs to the MCM family
K10726
GO:0003674,GO:0005488,GO:0005515,GO:0042802
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953
557.0
View
LYD3_k127_1858155_1
Belongs to the Glu Leu Phe Val dehydrogenases family
K00261
-
1.4.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000003093
253.0
View
LYD3_k127_1858155_10
RNA polymerase subunit 9
K03057
-
-
0.000000000000000000000000004045
114.0
View
LYD3_k127_1858155_11
binds to the 23S rRNA
K02929
-
-
0.00000000000000000000000001152
111.0
View
LYD3_k127_1858155_12
more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA
K11130
-
-
0.000000000000000001918
85.0
View
LYD3_k127_1858155_13
PFAM ribosomal protein
K02978
GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000005378
79.0
View
LYD3_k127_1858155_14
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03056
-
2.7.7.6
0.000000000001839
70.0
View
LYD3_k127_1858155_16
GINS complex protein
K09723
-
-
0.000000008418
64.0
View
LYD3_k127_1858155_17
protein conserved in archaea
K09723
-
-
0.0000005346
59.0
View
LYD3_k127_1858155_18
membrane
-
-
-
0.000000567
61.0
View
LYD3_k127_1858155_2
Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair
K02683
GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576
-
0.000000000000000000000000000000000000000000000000000000000000003285
233.0
View
LYD3_k127_1858155_3
Belongs to the UPF0215 family
K09120
-
-
0.000000000000000000000000000000000000000000000000000001063
198.0
View
LYD3_k127_1858155_4
Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair
K18882
-
-
0.0000000000000000000000000000000000000000000000000001322
198.0
View
LYD3_k127_1858155_5
Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication
K04802
GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0022616,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0043170,GO:0043626,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044796,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576
-
0.0000000000000000000000000000000000000000000000006057
184.0
View
LYD3_k127_1858155_6
PAC2 family
K07159
-
-
0.00000000000000000000000000000000000000000000000102
184.0
View
LYD3_k127_1858155_7
Glycosyltransferase like family 2
K00721
-
2.4.1.83
0.00000000000000000000000000000000000000000448
164.0
View
LYD3_k127_1858155_8
Methyltransferase
K07579
-
-
0.0000000000000000000000000000000000000004439
156.0
View
LYD3_k127_1858155_9
Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs
K07573
-
-
0.0000000000000000000000000000000007638
139.0
View
LYD3_k127_1904489_0
Myo-inositol-1-phosphate synthase
K01858
GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659
5.5.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000213
298.0
View
LYD3_k127_1904489_1
Histidine kinase-like ATPases
-
-
-
0.000000000000000000000000000000000000000000137
178.0
View
LYD3_k127_1904489_2
His Kinase A (phosphoacceptor) domain
-
-
-
0.0000000000000000000000006503
120.0
View
LYD3_k127_1904489_3
Bacterial phospho-glucose isomerase C-terminal SIS domain
K15916
-
5.3.1.8,5.3.1.9
0.000000000000000002238
87.0
View
LYD3_k127_191519_0
Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
K01689
-
4.2.1.11
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247
438.0
View
LYD3_k127_191519_1
Belongs to the MEMO1 family
K06990
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0032886,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0065007
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000004594
276.0
View
LYD3_k127_191519_2
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0031123,GO:0031125,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000000000001318
241.0
View
LYD3_k127_191519_3
mevalonate kinase activity
K00869,K15633
GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016126,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
2.7.1.36,5.4.2.12
0.00000000000000000000000000000000000000000001999
169.0
View
LYD3_k127_191519_4
Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
K00946
-
2.7.4.16
0.0000000000000000000000000000003885
131.0
View
LYD3_k127_191519_5
Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs
K16317
-
2.1.1.257
0.0000000000000000000000001316
113.0
View
LYD3_k127_191519_6
ThiS family
K03636
-
-
0.0000000000252
67.0
View
LYD3_k127_191519_7
PFAM Xylose isomerase domain protein TIM barrel
-
-
-
0.000001761
58.0
View
LYD3_k127_1927252_0
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
K05830
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001175
267.0
View
LYD3_k127_1927252_1
Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine
K05831
-
-
0.00000000000000000000000000000000000000000000000000001859
198.0
View
LYD3_k127_1954993_0
PFAM CoA-binding domain protein
K01905,K09181,K22224
-
6.2.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285
577.0
View
LYD3_k127_1954993_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K01887
GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.19
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254
475.0
View
LYD3_k127_1954993_10
4Fe-4S dicluster domain
-
-
-
0.0000000000000000000000000000001059
131.0
View
LYD3_k127_1954993_11
Putative zinc- or iron-chelating domain
K06940
-
-
0.0000000000000000000000000000002388
129.0
View
LYD3_k127_1954993_12
PFAM short-chain dehydrogenase reductase SDR
-
-
-
0.0000000000000001279
86.0
View
LYD3_k127_1954993_2
Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue
K00809
-
2.5.1.46
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366
421.0
View
LYD3_k127_1954993_3
PFAM Deoxyhypusine synthase
K00809
-
2.5.1.46
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611
349.0
View
LYD3_k127_1954993_4
Glutamate-cysteine ligase family 2(GCS2)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227
333.0
View
LYD3_k127_1954993_5
RimK-like ATP-grasp domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001412
289.0
View
LYD3_k127_1954993_6
Catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form coenzyme F420-0-glutamyl-glutamate (F420-2) or polyglutamated F420 derivatives
K12234
GO:0003674,GO:0003824,GO:0016874,GO:0016879,GO:0016881,GO:0052618
6.3.2.31,6.3.2.34
0.000000000000000000000000000000000000000000000000000000000000000008269
234.0
View
LYD3_k127_1954993_7
PFAM Polysaccharide pyruvyl transferase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001817
217.0
View
LYD3_k127_1954993_8
PFAM histone deacetylase superfamily
-
-
-
0.00000000000000000000000000000000000000000004864
172.0
View
LYD3_k127_1954993_9
RimK-like ATPgrasp N-terminal domain
-
-
-
0.00000000000000000000000000000000000000006153
159.0
View
LYD3_k127_1960347_0
Heat shock 70 kDa protein
K04043
-
-
1.996e-247
780.0
View
LYD3_k127_1960347_1
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
K01937
-
6.3.4.2
1.361e-200
638.0
View
LYD3_k127_1960347_2
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
K03687
-
-
0.00000000000000000000000003999
114.0
View
LYD3_k127_1960347_3
Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates
K18532
-
2.7.4.3
0.0000000000000000000001664
104.0
View
LYD3_k127_1960347_4
-
-
-
-
0.0000000000006153
75.0
View
LYD3_k127_1960347_5
deoxyhypusine monooxygenase activity
-
-
-
0.000000000101
66.0
View
LYD3_k127_1960347_6
signal transduction protein with CBS domains
-
-
-
0.0000000002075
66.0
View
LYD3_k127_2015614_0
Belongs to the Glu Leu Phe Val dehydrogenases family
K00261
-
1.4.1.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871
428.0
View
LYD3_k127_2015614_1
Glutamate synthase
-
-
-
0.0000000000000000000000000000000000000000000000000000000002289
207.0
View
LYD3_k127_20225_0
Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
K17758,K17759
-
4.2.1.136,5.1.99.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197
441.0
View
LYD3_k127_20225_1
pre-rRNA processing protein involved in ribosome biogenesis
K09140
GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
-
0.00000000000001158
77.0
View
LYD3_k127_2115426_0
PFAM Ribonuclease BN-like family
K07058
-
-
0.0000000000000000000000000000000000001004
154.0
View
LYD3_k127_2115426_1
PAC2 family
K07159
-
-
0.0000000001055
65.0
View
LYD3_k127_2161506_0
Belongs to the UPF0284 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432
316.0
View
LYD3_k127_2161506_1
Uncharacterised MFS-type transporter YbfB
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000001082
263.0
View
LYD3_k127_2161506_10
SpoVT / AbrB like domain
-
-
-
0.0001958
47.0
View
LYD3_k127_2161506_11
4-amino-4-deoxy-L-arabinose transferase activity
-
-
-
0.0003572
53.0
View
LYD3_k127_2161506_2
diphthine-ammonia ligase activity
K06927
-
6.3.1.14
0.000000000000000000000000000000000000000000000000693
183.0
View
LYD3_k127_2161506_3
Ferritin-like domain
K03594
-
1.16.3.1
0.000000000000000000000000000000000000000000006497
168.0
View
LYD3_k127_2161506_4
Cytidylyltransferase
K19712
-
2.7.7.62
0.0000000000000000000000000000000000000000007652
168.0
View
LYD3_k127_2161506_5
Glycosyltransferase Family 4
-
-
-
0.0000000000000000000000000000000000000716
157.0
View
LYD3_k127_2161506_6
Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
K02233
-
2.7.8.26
0.0000000000000000000000000000000000008557
149.0
View
LYD3_k127_2161506_7
PFAM Phosphatidylglycerophosphatase A
-
-
-
0.00000000000000000000000000000000001897
145.0
View
LYD3_k127_2161506_8
PFAM Glycosyl transferase family 2
K00721
-
2.4.1.83
0.0000000000000000000000000005451
122.0
View
LYD3_k127_2161506_9
TIGRFAM signal peptidase I, archaeal type
K13280
-
3.4.21.89
0.00000007233
62.0
View
LYD3_k127_2192476_0
Belongs to the argininosuccinate synthase family. Type 1 subfamily
K01940
GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
6.3.4.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654
457.0
View
LYD3_k127_2192476_1
TIGRFAM argininosuccinate lyase
K01755
GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
4.3.2.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668
323.0
View
LYD3_k127_2192476_2
aspartate kinase activity
-
-
-
0.000001395
51.0
View
LYD3_k127_227904_0
Protein of unknown function (DUF1015)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325
362.0
View
LYD3_k127_227904_1
Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity
K06188
GO:0003674,GO:0005215,GO:0005372,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006833,GO:0006884,GO:0006950,GO:0006970,GO:0008150,GO:0008361,GO:0009628,GO:0009987,GO:0009992,GO:0015250,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042044,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0050896,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066
-
0.00000000000000000000000000000000000000000000000000000000000000000000256
243.0
View
LYD3_k127_227904_2
monooxygenase activity
K06966
-
3.2.2.10
0.000000008634
58.0
View
LYD3_k127_2292263_0
SPFH Band 7 PHB domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000004596
216.0
View
LYD3_k127_2292263_1
Bacterial regulatory helix-turn-helix protein, lysR family
K03574
-
3.6.1.55
0.0006171
45.0
View
LYD3_k127_2402704_0
heavy metal-(Cd Co Hg Pb Zn)-translocating
K01534
-
3.6.3.3,3.6.3.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542
434.0
View
LYD3_k127_2402704_1
Prokaryotic glutathione synthetase, ATP-grasp domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001886
245.0
View
LYD3_k127_2402704_2
AIR synthase related protein, C-terminal domain
-
-
-
0.00000001525
57.0
View
LYD3_k127_2417810_0
Creatinase/Prolidase N-terminal domain
K01271
-
3.4.13.9
0.000000000000000000000000000000000000000000000000000000000000000000003164
242.0
View
LYD3_k127_2417810_1
COG1335 Amidases related to nicotinamidase
-
-
-
0.000000000000000000000000000000000000000000000000000006587
195.0
View
LYD3_k127_2417810_2
PBS lyase HEAT-like repeat
-
-
-
0.000000000005162
72.0
View
LYD3_k127_2526086_0
DNA helicase
K03657
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784
413.0
View
LYD3_k127_2526086_1
Putative modulator of DNA gyrase
K03568
-
-
0.00000000000001898
78.0
View
LYD3_k127_2535269_0
Cation transporter/ATPase, N-terminus
K01537
-
3.6.3.8
0.000000000000000000000000000000000000000000000000000000000000000002653
236.0
View
LYD3_k127_2535269_1
DNA Topoisomerase I (eukaryota)
K03163
-
5.99.1.2
0.0000000000000000000000000000000000000000000000000000000001876
213.0
View
LYD3_k127_2535269_2
Belongs to the HAM1 NTPase family
K02428
-
3.6.1.66
0.0000000000000000000000000000000000000000271
157.0
View
LYD3_k127_2535269_3
-
-
-
-
0.0000000000000000000000664
102.0
View
LYD3_k127_2581543_0
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
K00789
-
2.5.1.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865
358.0
View
LYD3_k127_2581543_1
molybdopterin binding domain
-
-
-
0.00000000000000000000000000000000000000000000003942
179.0
View
LYD3_k127_2600079_0
Protein of unknown function (DUF1246)
K06863
-
6.3.4.23
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241
555.0
View
LYD3_k127_2600079_1
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K03234
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208
495.0
View
LYD3_k127_2600079_2
Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates
K06863
-
6.3.4.23
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113
323.0
View
LYD3_k127_2600079_3
Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates
K06863
-
6.3.4.23
0.00000000000000000000000000000000000000000000000000000000000000000000002348
243.0
View
LYD3_k127_2600079_4
Ser thr protein kinase
K07176
-
-
0.0000000000000000000000000000000000000000000000000004014
193.0
View
LYD3_k127_2600079_5
SAICAR synthetase
K01923
-
6.3.2.6
0.00000000000000000008976
92.0
View
LYD3_k127_2601680_0
ATP-citrate synthase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues
K01648
GO:0000166,GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003878,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006066,GO:0006082,GO:0006084,GO:0006085,GO:0006101,GO:0006107,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006694,GO:0006695,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009893,GO:0009987,GO:0012505,GO:0015936,GO:0016020,GO:0016053,GO:0016125,GO:0016126,GO:0016192,GO:0016740,GO:0016746,GO:0016999,GO:0017076,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030141,GO:0030554,GO:0031323,GO:0031325,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032940,GO:0032991,GO:0033500,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0034774,GO:0035337,GO:0035383,GO:0035384,GO:0035578,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042582,GO:0042592,GO:0042593,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046165,GO:0046390,GO:0046394,GO:0046483,GO:0046903,GO:0046912,GO:0046949,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055086,GO:0060205,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0071944,GO:0072330,GO:0072350,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:0101002,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1904813
2.3.3.8
2.007e-240
757.0
View
LYD3_k127_2601680_1
ATP-citrate synthase
K01648
GO:0000166,GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003878,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006066,GO:0006082,GO:0006084,GO:0006085,GO:0006101,GO:0006107,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006694,GO:0006695,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009893,GO:0009987,GO:0012505,GO:0015936,GO:0016020,GO:0016053,GO:0016125,GO:0016126,GO:0016192,GO:0016740,GO:0016746,GO:0016999,GO:0017076,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030141,GO:0030554,GO:0031323,GO:0031325,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032940,GO:0032991,GO:0033500,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0034774,GO:0035337,GO:0035383,GO:0035384,GO:0035578,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042582,GO:0042592,GO:0042593,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046165,GO:0046390,GO:0046394,GO:0046483,GO:0046903,GO:0046912,GO:0046949,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055086,GO:0060205,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0071944,GO:0072330,GO:0072350,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:0101002,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1904813
2.3.3.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696
343.0
View
LYD3_k127_2626849_0
Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase
K02322
-
2.7.7.7
1.784e-286
914.0
View
LYD3_k127_2626849_1
MazG nucleotide pyrophosphohydrolase domain
-
-
-
0.00000000000000000000000008257
110.0
View
LYD3_k127_2626849_2
Sec61beta family
-
-
-
0.000000008057
58.0
View
LYD3_k127_264138_0
PFAM Aminotransferase class I and II
K10206
-
2.6.1.83
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725
402.0
View
LYD3_k127_264138_1
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009497
354.0
View
LYD3_k127_264138_2
glutamyl-tRNA reductase activity
K02407,K02492,K10714,K15671
GO:0005575,GO:0005623,GO:0009288,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0055040
1.2.1.70
0.00000000000000000000000000000000000000000000000000627
192.0
View
LYD3_k127_264138_4
Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
K01778
-
5.1.1.7
0.0001273
45.0
View
LYD3_k127_2676273_0
PFAM chaperonin Cpn60 TCP-1
K22447
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0042802,GO:0044183,GO:0051082,GO:0061077
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558
569.0
View
LYD3_k127_2676273_1
The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
K06001
-
4.2.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002754
284.0
View
LYD3_k127_2676273_2
regulator of amino acid metabolism, contains ACT domain
K07103
-
-
0.0000000000000000000000000000000000000001682
155.0
View
LYD3_k127_2676273_3
ABC-type dipeptide oligopeptide nickel transport
K02034
-
-
0.0000000000000000000000000001135
120.0
View
LYD3_k127_268028_0
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938
554.0
View
LYD3_k127_268028_1
Isocitrate isopropylmalate dehydrogenase
K00052
-
1.1.1.85
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658
398.0
View
LYD3_k127_268028_2
Chorismate mutase type II
K14170
-
4.2.1.51,5.4.99.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783
323.0
View
LYD3_k127_268028_3
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K16792
-
4.2.1.114
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003856
285.0
View
LYD3_k127_268028_4
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01704
-
4.2.1.33,4.2.1.35
0.00000000000000000000000000000000000000000000000000003523
193.0
View
LYD3_k127_268028_5
Prephenate dehydrogenase
K04517
-
1.3.1.12
0.0000000000000000000001932
101.0
View
LYD3_k127_2686892_0
pyruvate flavodoxin ferredoxin oxidoreductase
K00174
-
1.2.7.11,1.2.7.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000007122
271.0
View
LYD3_k127_2686892_1
Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex
K03594
-
1.16.3.1
0.00000000008949
70.0
View
LYD3_k127_2702449_0
Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
K02379
-
-
0.00000000000000000000000000000001936
132.0
View
LYD3_k127_2702449_1
Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
K03752
-
2.7.7.77
0.000000000000000000000000002556
124.0
View
LYD3_k127_2702449_2
Rieske-like [2Fe-2S] domain
-
-
-
0.0000000000000000000006462
99.0
View
LYD3_k127_2702449_3
molybdopterin-guanine dinucleotide biosynthesis
K03753
-
-
0.0000000000000003895
85.0
View
LYD3_k127_2777481_0
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554
486.0
View
LYD3_k127_2777481_1
TIGRFAM LPPG domain protein containing protein
K11212
-
2.7.8.28
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006466
354.0
View
LYD3_k127_2777481_2
Belongs to the eukaryotic ribosomal protein eS1 family
K02984
GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000000000000000000000000000000000000000000000005038
205.0
View
LYD3_k127_2777481_3
MoaE protein
K03635
-
2.8.1.12
0.000000000000000000000000006285
115.0
View
LYD3_k127_2777481_4
phosphate transport
K07220
-
-
0.00000003227
61.0
View
LYD3_k127_2818395_0
The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
K01696
-
4.2.1.20
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554
584.0
View
LYD3_k127_2818395_1
component I
K01657
-
4.1.3.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237
474.0
View
LYD3_k127_2818395_10
-
-
-
-
0.00000008294
59.0
View
LYD3_k127_2818395_11
Glycosyl hydrolase family 57
K07405
-
3.2.1.1
0.00001763
53.0
View
LYD3_k127_2818395_2
PAS domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415
398.0
View
LYD3_k127_2818395_3
Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
K00766,K13497
-
2.4.2.18,4.1.3.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319
347.0
View
LYD3_k127_2818395_4
Glutamine amidotransferase of anthranilate synthase
K01658
-
4.1.3.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000002917
269.0
View
LYD3_k127_2818395_5
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
K01695
-
4.2.1.20
0.000000000000000000000000000000000000000000000000000000000000000000006039
243.0
View
LYD3_k127_2818395_6
Indole-3-glycerol phosphate synthase
K01609
-
4.1.1.48
0.00000000000000000000000000000000000000000000000000000000001576
215.0
View
LYD3_k127_2818395_7
signal transduction histidine kinase
K03406
-
-
0.0000000000000000000000000000000000000008968
171.0
View
LYD3_k127_2818395_8
Uncharacterised protein family UPF0066
-
-
-
0.00000000000000000000000000000000007935
138.0
View
LYD3_k127_2818395_9
PFAM CutA1 divalent ion tolerance protein
K03926
-
-
0.000000000000000000000000004455
115.0
View
LYD3_k127_2822607_0
Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
K03106
-
3.6.5.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058
497.0
View
LYD3_k127_2822607_1
Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs
K07583
-
5.4.99.25
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858
367.0
View
LYD3_k127_2822607_2
Cytidine and deoxycytidylate deaminase zinc-binding region
K01493
-
3.5.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000001615
243.0
View
LYD3_k127_2822607_3
Protein of unknown function (DUF655)
K07572
-
-
0.00000000000000000000000000000000000000000000000000002683
193.0
View
LYD3_k127_2822607_4
Pfam:Methyltransf_26
K02493
-
2.1.1.297
0.00000000000000000000000000000000000000000000001769
177.0
View
LYD3_k127_2822607_5
Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
K02528
-
2.1.1.182
0.000000000000000000000000000000000000000000229
168.0
View
LYD3_k127_2822607_6
Belongs to the eukaryotic ribosomal protein eL21 family
K02889
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000004508
101.0
View
LYD3_k127_2822607_7
RNA polymerase Rpb4
K03051
-
2.7.7.6
0.00000000000000003675
85.0
View
LYD3_k127_2860350_0
Oxidoreductase molybdopterin binding domain
-
-
-
0.000000000000000000000000000000000000000008752
160.0
View
LYD3_k127_2860350_1
Domain of unknown function (DUF296)
-
-
-
0.000000000000000000000000121
110.0
View
LYD3_k127_2860350_2
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis
K04479
-
2.7.7.7
0.00000000000000000000402
98.0
View
LYD3_k127_2871485_0
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily
K01845
-
5.4.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216
514.0
View
LYD3_k127_2871485_1
Cobyric acid synthase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505
444.0
View
LYD3_k127_2871485_10
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit
K03399
-
2.1.1.289
0.000000000000000000000000000000000000000002505
163.0
View
LYD3_k127_2871485_11
Siroheme synthase
K02304
-
1.3.1.76,4.99.1.4
0.00000000000000000000000000000004102
133.0
View
LYD3_k127_2871485_12
Cobalamin biosynthesis protein cbiG
K02189,K05934,K05936,K13541
-
2.1.1.131,2.1.1.133,2.1.1.271,3.7.1.12
0.00000000000000000000000000000005533
132.0
View
LYD3_k127_2871485_13
Belongs to the precorrin methyltransferase family
K02303
GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.1.1.107
0.000000000000000000000001663
105.0
View
LYD3_k127_2871485_2
Belongs to the ALAD family
K01698
-
4.2.1.24
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298
388.0
View
LYD3_k127_2871485_3
Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
K02188
-
2.1.1.195
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199
323.0
View
LYD3_k127_2871485_4
PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase
K05936
-
2.1.1.133,2.1.1.271
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148
300.0
View
LYD3_k127_2871485_5
Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
K02492
-
1.2.1.70
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762
306.0
View
LYD3_k127_2871485_6
Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
K01749
-
2.5.1.61
0.00000000000000000000000000000000000000000000000000000000000000000000000000000002431
278.0
View
LYD3_k127_2871485_7
Cobalamin (Vitamin B12) biosynthesis CbiX protein
K03794
-
4.99.1.4
0.000000000000000000000000000000000000000000000000000000000001431
223.0
View
LYD3_k127_2871485_8
Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7
K02191
-
2.1.1.196
0.0000000000000000000000000000000000000000000000000001008
192.0
View
LYD3_k127_2871485_9
Tetrapyrrole (Corrin/Porphyrin) Methylases
K03394
-
2.1.1.130,2.1.1.151
0.000000000000000000000000000000000000000000000000209
185.0
View
LYD3_k127_2876080_0
Fibronectin-binding protein A N-terminus (FbpA)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981
327.0
View
LYD3_k127_2876080_1
GyrI-like small molecule binding domain
-
-
-
0.000000000000000000000000000000000000000000000000522
179.0
View
LYD3_k127_2876080_2
-
-
-
-
0.000946
44.0
View
LYD3_k127_2897199_0
Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP
K01974
GO:0003674,GO:0003824,GO:0003963,GO:0009975,GO:0016874,GO:0016886,GO:0140098
6.5.1.4
0.000000000000000000000000000000000000000000000000000000000517
210.0
View
LYD3_k127_2897199_1
Methyltransferase
K15429
-
2.1.1.228
0.0000000000000000000000000000000000000000000000005073
186.0
View
LYD3_k127_2915353_0
Protein of unknown function (DUF521)
K09123
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244
381.0
View
LYD3_k127_2915353_1
Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
K01823
-
5.3.3.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184
368.0
View
LYD3_k127_2915353_2
UbiD family decarboxylase
K03182
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464
4.1.1.98
0.000000000000000000000000000000000000000000000000002647
186.0
View
LYD3_k127_2915353_3
Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids
K06981
-
2.7.4.26
0.000000000000000000000000000000000000000000002608
174.0
View
LYD3_k127_2915353_4
Belongs to the UPF0107 family
K09128
-
-
0.00000000000000000000000000000000000000001586
156.0
View
LYD3_k127_2915353_5
Belongs to the FPP GGPP synthase family
K13787
-
2.5.1.1,2.5.1.10,2.5.1.29
0.00000000000000000000000000000000005507
139.0
View
LYD3_k127_2915353_6
Domain of unknown function (DUF4287)
-
-
-
0.000000000009931
68.0
View
LYD3_k127_2979884_0
NADH flavin oxidoreductase NADH oxidase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005897
294.0
View
LYD3_k127_2979884_1
Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single- stranded endonuclease activity
K03547
-
-
0.00000000000000000000000000000002405
141.0
View
LYD3_k127_2979884_2
Protein of unknown function (DUF1697)
-
-
-
0.00000000000000000000000000292
117.0
View
LYD3_k127_2979884_3
Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50 Mre11 complex
K03546
-
-
0.0000000000000002644
93.0
View
LYD3_k127_2979884_4
PFAM Deoxyribonuclease rho motif-related TRAM
-
-
-
0.000000001235
61.0
View
LYD3_k127_2979884_5
Transcriptional regulator
K07730
-
-
0.000267
45.0
View
LYD3_k127_2979884_6
Parallel beta-helix repeats
-
-
-
0.0005518
50.0
View
LYD3_k127_2991356_0
Elongator protein 3, MiaB family, Radical SAM
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000003639
284.0
View
LYD3_k127_2991356_1
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis
K04479
-
2.7.7.7
0.0000000000000000000000000000000000000000000000000000006981
199.0
View
LYD3_k127_2991356_2
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
-
6.1.1.16
0.000000000000000000000000000005988
125.0
View
LYD3_k127_2991356_3
Cytochrome b5-like Heme/Steroid binding domain
-
-
-
0.00000000000000000000653
94.0
View
LYD3_k127_3001765_0
PFAM ABC-2 type transporter
K09694
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007916
284.0
View
LYD3_k127_3001765_1
AAA domain, putative AbiEii toxin, Type IV TA system
K09695
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000002673
268.0
View
LYD3_k127_3001765_2
COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
K01247
-
3.2.2.21
0.000000000000000000000000000000001246
133.0
View
LYD3_k127_302009_0
AraC-like ligand binding domain
-
-
-
0.0000000000000000000000000006275
117.0
View
LYD3_k127_302009_1
Belongs to the UPF0147 family
K09721
-
-
0.00000000000000000000005643
100.0
View
LYD3_k127_302009_2
PFAM Sjogrens syndrome scleroderma autoantigen 1
K07143
-
-
0.0000000000000003944
83.0
View
LYD3_k127_302836_0
Molybdenum cofactor synthesis domain protein
K03750,K07219
-
2.10.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648
334.0
View
LYD3_k127_302836_1
MoeA domain protein domain I and II
K03750
-
2.10.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663
305.0
View
LYD3_k127_3064438_0
AAA domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617
532.0
View
LYD3_k127_3064438_1
PFAM glycosidase PH1107-related
K20885
-
2.4.1.339,2.4.1.340
0.00000000000000000000000000005513
118.0
View
LYD3_k127_3064438_2
PFAM Glycosyl transferase family 2
-
-
-
0.000000000000000000004251
101.0
View
LYD3_k127_30669_0
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
K01881
-
6.1.1.15
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065
504.0
View
LYD3_k127_30669_1
ABC-2 family transporter protein
K01992
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147
382.0
View
LYD3_k127_30669_2
PFAM ABC transporter related
K01990
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406
365.0
View
LYD3_k127_30669_3
transcriptional regulator PadR family
-
-
-
0.000000000000006734
82.0
View
LYD3_k127_3083267_0
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695
313.0
View
LYD3_k127_3083267_1
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
K02867
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000007994
196.0
View
LYD3_k127_3083267_2
Binds directly to 23S rRNA. Probably involved in E site tRNA release
K02863
GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000015
184.0
View
LYD3_k127_3083267_3
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
-
-
0.0000000000000000000000000000000000000000000000002035
185.0
View
LYD3_k127_3083267_4
D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo
K09716
-
3.1.1.96
0.000000000000000000000000000000000000000008108
164.0
View
LYD3_k127_3083267_5
Transcription elongation factor Spt5
K02601
-
-
0.0000000000000000000000000000000000000001607
154.0
View
LYD3_k127_3083267_6
Protein of unknown function (DUF3795)
-
-
-
0.00000000000000000000000000000000002291
139.0
View
LYD3_k127_3180655_0
ATPase activity
K01990
-
-
0.000009069
47.0
View
LYD3_k127_3328840_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01887
GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.19
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526
354.0
View
LYD3_k127_340232_0
DNA methylase
K00590
-
2.1.1.113
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739
400.0
View
LYD3_k127_340232_1
Oligopeptidase F
K08602
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002551
306.0
View
LYD3_k127_340232_2
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K13798
-
2.7.7.6
0.000000000000000000000000000000001024
134.0
View
LYD3_k127_340232_3
lysine biosynthesis protein LysW
-
-
-
0.0002427
46.0
View
LYD3_k127_3448375_0
Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
K15987
-
3.6.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892
598.0
View
LYD3_k127_3448375_1
PP-loop family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000007885
277.0
View
LYD3_k127_3448375_2
General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation
K03120
-
-
0.000000000000000000000000000000000000000000000000000000000000000171
225.0
View
LYD3_k127_3448375_3
DNA polymerase beta domain protein region
K07073
-
-
0.00000000000000000000000000000000000000000000000000000000007536
212.0
View
LYD3_k127_3448375_4
May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity
K06965
GO:0000956,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0034661,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070651,GO:0070966,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008
-
0.00000000000000000000000000000000000000000000000000000000009484
217.0
View
LYD3_k127_3448375_5
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
K00931
GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.7.2.11
0.0000000000000000000000000000006229
126.0
View
LYD3_k127_3448375_6
Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids
K19664
-
2.7.7.67
0.0000000000000000000000000000007746
127.0
View
LYD3_k127_3448375_7
Belongs to the CDP-alcohol phosphatidyltransferase class-I family
K00995,K08744
GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576
2.7.8.41,2.7.8.5
0.00000000000000001032
90.0
View
LYD3_k127_3448375_8
Belongs to the dGTPase family. Type 2 subfamily
K01129
-
3.1.5.1
0.0000001513
59.0
View
LYD3_k127_3464093_0
TIGRFAM DNA polymerase (pol2)
K02319
-
2.7.7.7
3.171e-223
716.0
View
LYD3_k127_3464093_1
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome
K02316
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008481
338.0
View
LYD3_k127_3464093_2
PFAM Rubrerythrin
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001317
279.0
View
LYD3_k127_3464093_3
GTPase of
K06942
-
-
0.0000000000000000000000000000000000000000000000000000003086
196.0
View
LYD3_k127_3464093_4
4Fe-4S binding domain protein
-
-
-
0.00000000000000000000000000003675
134.0
View
LYD3_k127_3464093_5
protein-disulfide reductase activity
K04084,K06196
-
1.8.1.8
0.00000000000006823
80.0
View
LYD3_k127_3464093_6
Nitrous oxidase accessory protein
-
-
-
0.0000002704
62.0
View
LYD3_k127_3507915_0
PFAM glycosyl transferase, family 35
K00688
-
2.4.1.1
3.158e-242
759.0
View
LYD3_k127_3507915_1
PFAM aminoacyl-tRNA synthetase class Ib
K01867
-
6.1.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831
461.0
View
LYD3_k127_3507915_10
-
-
-
-
0.0000001256
55.0
View
LYD3_k127_3507915_11
Carbohydrate phosphorylase
K00688
-
2.4.1.1
0.00007439
46.0
View
LYD3_k127_3507915_12
Archaeal TRASH domain
-
-
-
0.0009008
48.0
View
LYD3_k127_3507915_2
Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
K01939
-
6.3.4.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157
350.0
View
LYD3_k127_3507915_3
Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
K03517
-
2.5.1.72
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094
338.0
View
LYD3_k127_3507915_4
Belongs to the NiCoT transporter (TC 2.A.52) family
K07241
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392
335.0
View
LYD3_k127_3507915_5
Peptidase family M20/M25/M40
K01439
-
3.5.1.18
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484
325.0
View
LYD3_k127_3507915_6
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
-
-
-
0.000000000000000000000000000000000000000000000000000002112
206.0
View
LYD3_k127_3507915_7
Transcriptional regulator
K07722
-
-
0.00000000000000000000000000000005455
130.0
View
LYD3_k127_3507915_8
Calcineurin-like phosphoesterase superfamily domain
K07095
-
-
0.00000000000000000000000000001791
124.0
View
LYD3_k127_3507915_9
Putative zinc- or iron-chelating domain
K06940
-
-
0.000000000000000000009533
97.0
View
LYD3_k127_3519964_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03047
GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234
2.7.7.6
0.0000000000000000000000000000000000000000000000000000000000000000000004519
246.0
View
LYD3_k127_3519964_1
Located on the platform of the 30S subunit
K02948
GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000002963
196.0
View
LYD3_k127_3519964_2
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
K02952
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000008876
179.0
View
LYD3_k127_3519964_3
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
K02986
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112
-
0.000000000000000000000000000000000000000000000005083
179.0
View
LYD3_k127_3519964_4
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
K02871
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000003819
130.0
View
LYD3_k127_3519964_5
Belongs to the eukaryotic ribosomal protein eL18 family
K02883
-
-
0.0000000000000000000000000015
115.0
View
LYD3_k127_3519964_6
Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.
K15383
-
-
0.00000000000000000008195
91.0
View
LYD3_k127_3519964_7
Belongs to the universal ribosomal protein uS9 family
K02996
GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000718
76.0
View
LYD3_k127_3519964_8
Belongs to the glycosyl hydrolase 5 (cellulase A) family
-
-
-
0.000000007876
67.0
View
LYD3_k127_3540796_0
SMART Elongator protein 3 MiaB NifB
K04034
-
1.21.98.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706
320.0
View
LYD3_k127_3540796_1
HemN C-terminal domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000008409
217.0
View
LYD3_k127_3540796_2
SMART Elongator protein 3 MiaB NifB
K22227
-
-
0.000000000000000000000000000000000000000000000000004508
194.0
View
LYD3_k127_3657934_0
succinate dehydrogenase or fumarate reductase, flavoprotein
K00239
-
1.3.5.1,1.3.5.4
5.217e-206
655.0
View
LYD3_k127_3657934_1
6-phosphofructokinase activity
K00850,K21071
-
2.7.1.11,2.7.1.90
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009106
417.0
View
LYD3_k127_3657934_2
Metal dependent phosphohydrolases with conserved 'HD' motif.
K09163
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000005177
271.0
View
LYD3_k127_3657934_3
Serine threonine protein kinase
K07178
-
2.7.11.1
0.00000000000000000000000000000000000000000000000000000000000000001874
232.0
View
LYD3_k127_3657934_4
SMART KH domain protein
K06961
-
-
0.00000000000000000000000000000000000000000000001864
176.0
View
LYD3_k127_3657934_5
Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits
K03236
-
-
0.00000000000000000000000000001365
120.0
View
LYD3_k127_3657934_6
TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein
K00240,K00245
-
1.3.5.1,1.3.5.4
0.000000000001365
70.0
View
LYD3_k127_3672412_0
Belongs to the TCP-1 chaperonin family
K22447
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032
548.0
View
LYD3_k127_3733016_0
TIGRFAM glycogen debranching enzyme
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742
353.0
View
LYD3_k127_3733016_1
Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
K01803
GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
5.3.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811
282.0
View
LYD3_k127_3733016_2
Protein of unknown function DUF89
K09116
-
-
0.00000000000000000000000000000000000000000000000002241
190.0
View
LYD3_k127_3754340_0
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701
521.0
View
LYD3_k127_3754340_1
Belongs to the FPP GGPP synthase family
K00804
-
2.5.1.1,2.5.1.10,2.5.1.29
0.00000000000000000000000000002989
121.0
View
LYD3_k127_3777517_0
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194
420.0
View
LYD3_k127_3777517_1
Phosphate transporter family
K03306
-
-
0.0000000000000000000000000000000000000000000000000000000003329
212.0
View
LYD3_k127_3777517_2
Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
K01933
-
6.3.3.1
0.000000000000000000000000000000000000000000000000000000001101
214.0
View
LYD3_k127_3777517_3
Predicted nucleotide-binding protein containing TIR-like domain
-
-
-
0.00000000000002886
77.0
View
LYD3_k127_3777517_4
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.00000001552
59.0
View
LYD3_k127_379092_0
PFAM Aminotransferase class I and II
K04720
-
4.1.1.81
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006831
286.0
View
LYD3_k127_379092_1
Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
K02227
-
6.3.1.10
0.000000000000000000000000000000000000000000000000000000000000000000000000001032
265.0
View
LYD3_k127_379092_2
S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis
K20215
GO:0003674,GO:0003824,GO:0004164,GO:0006417,GO:0006448,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:2000112,GO:2000765
2.1.1.98
0.0000000000000000000000000000000000000000000000000000009841
199.0
View
LYD3_k127_3791454_0
PFAM Chaperonin Cpn60 TCP-1
K22447
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596
606.0
View
LYD3_k127_3791454_1
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
K07566
-
2.7.7.87
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566
390.0
View
LYD3_k127_3791454_2
Thymidylate synthase
K00560
-
2.1.1.45
0.00000000000000000000000001459
119.0
View
LYD3_k127_3791454_3
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
-
-
-
0.00001502
48.0
View
LYD3_k127_3842969_0
DEAD DEAH box helicase domain protein
K03724
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235
533.0
View
LYD3_k127_3842969_1
Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
K00784
-
3.1.26.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000101
270.0
View
LYD3_k127_3842969_2
methylase
K07446
-
2.1.1.213
0.000000000000000000000000000000000000000000000000000000000004567
220.0
View
LYD3_k127_3842969_3
RNA methylase
-
GO:0003674,GO:0003824,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
-
0.0000000000000000000000000000000000000000000004456
171.0
View
LYD3_k127_3842969_4
Fe-S-cluster oxidoreductase
K06940
-
-
0.000000000000000000000001482
109.0
View
LYD3_k127_3842969_5
PFAM Xylose isomerase domain protein TIM barrel
-
-
-
0.00000000000000000000004554
109.0
View
LYD3_k127_3842969_6
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
K00948
-
2.7.6.1
0.0007745
42.0
View
LYD3_k127_3935128_0
Sugar isomerase (SIS)
K15916
-
5.3.1.8,5.3.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000185
249.0
View
LYD3_k127_3935128_1
Myo-inositol-1-phosphate synthase
K01858
-
5.5.1.4
0.000000000000000000000000000000000000000000000009828
178.0
View
LYD3_k127_3935128_2
Putative RNA methyltransferase
K09142
-
-
0.000000000000000000000000003392
114.0
View
LYD3_k127_3945831_0
Domain of unknown function (DUF2088)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443
317.0
View
LYD3_k127_3945831_1
TIGRFAM ribosomal-protein-alanine acetyltransferase
K03789
GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234
2.3.1.128
0.0000000000000000000000000000000000000000001909
164.0
View
LYD3_k127_3945831_2
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
-
-
0.0000006536
54.0
View
LYD3_k127_3980204_0
ABC-type cobalt transport system ATPase component
K16787
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218
298.0
View
LYD3_k127_3980204_1
PFAM ABC transporter related
K03529,K06166,K16786,K16787
-
2.7.8.37
0.000000000000000000000000000000000000000000000000000000000000000000000001182
254.0
View
LYD3_k127_3980204_2
PFAM Cobalt transport protein
K16785
-
-
0.000000000000000000000000000000000153
143.0
View
LYD3_k127_3980204_3
DHH family
-
-
-
0.0000000000000000000000000000009549
134.0
View
LYD3_k127_3980204_4
Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding
K04798
-
-
0.000000000000000002486
88.0
View
LYD3_k127_3980204_5
Protein of unknown function (DUF3194)
-
-
-
0.0000002078
56.0
View
LYD3_k127_3980204_6
endonuclease
K01151
-
3.1.21.2
0.0008007
44.0
View
LYD3_k127_4056813_0
NAD(P)-binding Rossmann-like domain
K03388
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
8.715e-252
800.0
View
LYD3_k127_4056813_1
DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair
K10747
GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576
6.5.1.1,6.5.1.6,6.5.1.7
7.95e-212
673.0
View
LYD3_k127_4056813_10
Nitroreductase family
-
-
-
0.0001123
48.0
View
LYD3_k127_4056813_2
PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein
K00205
-
-
0.000000000000000000000000000000000000000000006515
175.0
View
LYD3_k127_4056813_3
Belongs to the thioredoxin family
K03671
-
-
0.0000000000000000000000000000000000000788
144.0
View
LYD3_k127_4056813_4
TIGRFAM YihY family protein (not ribonuclease BN)
K07058
-
-
0.0000000000000000000000000000000000004424
152.0
View
LYD3_k127_4056813_5
PFAM Nitroreductase
-
-
-
0.000000000000000000000001101
108.0
View
LYD3_k127_4056813_6
-
-
-
-
0.0000000000007448
77.0
View
LYD3_k127_4056813_7
Large-conductance mechanosensitive channel, MscL
K03282
-
-
0.00000000002657
69.0
View
LYD3_k127_4056813_8
acetyltransferase
-
-
-
0.00000000008852
65.0
View
LYD3_k127_4056813_9
Protein of unknown function DUF72
-
-
-
0.0000001793
57.0
View
LYD3_k127_4084277_0
Pfam:DUF650
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905
454.0
View
LYD3_k127_4084277_1
pyridoxamine 5'-phosphate
K07005
-
-
0.00000000000000000000000003147
113.0
View
LYD3_k127_4084277_2
membrane
-
-
-
0.000000000000000000000001541
120.0
View
LYD3_k127_4108933_0
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
K05830
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323
440.0
View
LYD3_k127_4108933_1
Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily
K05829
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815
429.0
View
LYD3_k127_4108933_2
Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis)
K05828
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761
295.0
View
LYD3_k127_4108933_3
Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine
K05831
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007983
297.0
View
LYD3_k127_4108933_4
radical SAM domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000687
269.0
View
LYD3_k127_4108933_5
PFAM Rieske 2Fe-2S domain
K05710
-
-
0.000000000000000000000007359
104.0
View
LYD3_k127_4108933_6
Glycosyl transferase family 2
-
-
-
0.00000003487
59.0
View
LYD3_k127_4110516_0
DNA polymerase beta domain protein region
K09717
-
-
0.000000000000000000000000000000000001519
149.0
View
LYD3_k127_4110516_1
DNA polymerase beta domain protein region
K09717
-
-
0.0000000000000000000000000002335
127.0
View
LYD3_k127_4110516_2
DNA polymerase beta domain protein region
K09717
-
-
0.0000000000000000000000000007294
126.0
View
LYD3_k127_4137792_0
Cell division protein 48 (CDC48), domain 2
K13525
-
-
0.000000000000000000000000000000000000000000000000000008425
194.0
View
LYD3_k127_4137792_1
helix_turn_helix ASNC type
-
-
-
0.000000000000000000000000000000001165
135.0
View
LYD3_k127_4137792_2
Domain of unknown function (DUF1610)
K07580
-
-
0.00000000000001724
74.0
View
LYD3_k127_4137792_3
Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA
K03232
-
-
0.000000004458
61.0
View
LYD3_k127_4137792_4
Belongs to the TPP enzyme family
K01576
-
4.1.1.7
0.00000003237
58.0
View
LYD3_k127_4148152_0
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538
550.0
View
LYD3_k127_4148152_1
Thiamine pyrophosphate enzyme, central domain
K01652
-
2.2.1.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137
521.0
View
LYD3_k127_4148152_2
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01703
-
4.2.1.33,4.2.1.35
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548
511.0
View
LYD3_k127_4148152_3
Isocitrate isopropylmalate dehydrogenase
K00052
-
1.1.1.85
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541
398.0
View
LYD3_k127_4148152_4
Chorismate mutase type II
K14170
-
4.2.1.51,5.4.99.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185
317.0
View
LYD3_k127_4148152_5
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01704
GO:0003674,GO:0003824,GO:0003861,GO:0016829,GO:0016835,GO:0016836
4.2.1.33,4.2.1.35
0.000000000000000000000000000000000000000000000000000003589
196.0
View
LYD3_k127_4148152_6
acetolactate synthase, small
K01653
-
2.2.1.6
0.00000000000000000000000000000000000000000000000000001359
193.0
View
LYD3_k127_415387_0
Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs
K18779
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
2.4.2.48
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081
420.0
View
LYD3_k127_415387_1
exonuclease of the beta-lactamase fold involved in RNA processing
K07577
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428
379.0
View
LYD3_k127_415387_10
PFAM Like-Sm ribonucleoprotein, core
-
-
-
0.0000000000000000000000000006395
119.0
View
LYD3_k127_415387_11
Archaeal transcriptional regulator TrmB
-
-
-
0.0000000132
68.0
View
LYD3_k127_415387_12
PFAM CBS domain
-
-
-
0.000000648
62.0
View
LYD3_k127_415387_13
subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors
K04505,K04522,K06060
GO:0000003,GO:0000041,GO:0000045,GO:0000122,GO:0000186,GO:0000323,GO:0000775,GO:0000776,GO:0001501,GO:0001505,GO:0001568,GO:0001654,GO:0001666,GO:0001708,GO:0001754,GO:0001756,GO:0001764,GO:0001773,GO:0001775,GO:0001919,GO:0001921,GO:0001932,GO:0001933,GO:0001934,GO:0001942,GO:0001944,GO:0001945,GO:0001946,GO:0001947,GO:0002009,GO:0002027,GO:0002036,GO:0002038,GO:0002119,GO:0002164,GO:0002244,GO:0002252,GO:0002253,GO:0002263,GO:0002265,GO:0002274,GO:0002275,GO:0002283,GO:0002285,GO:0002286,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003143,GO:0003407,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005640,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005790,GO:0005791,GO:0005794,GO:0005798,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005929,GO:0005938,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006486,GO:0006508,GO:0006509,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006825,GO:0006836,GO:0006839,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006903,GO:0006909,GO:0006914,GO:0006915,GO:0006928,GO:0006936,GO:0006941,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007033,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007175,GO:0007176,GO:0007219,GO:0007220,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0007507,GO:0007548,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007626,GO:0008013,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008283,GO:0008284,GO:0008306,GO:0008324,GO:0008406,GO:0008544,GO:0008593,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009952,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010453,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010942,GO:0010958,GO:0010975,GO:0010976,GO:0010977,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0015031,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0015630,GO:0015677,GO:0015695,GO:0015696,GO:0015833,GO:0015871,GO:0016020,GO:0016021,GO:0016043,GO:0016048,GO:0016055,GO:0016079,GO:0016080,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016324,GO:0016477,GO:0016485,GO:0016787,GO:0017015,GO:0017156,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019866,GO:0019867,GO:0019904,GO:0021532,GO:0021537,GO:0021543,GO:0021782,GO:0021795,GO:0021870,GO:0021885,GO:0021895,GO:0021904,GO:0021915,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022404,GO:0022405,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030001,GO:0030003,GO:0030016,GO:0030017,GO:0030018,GO:0030030,GO:0030054,GO:0030097,GO:0030099,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030165,GO:0030182,GO:0030318,GO:0030323,GO:0030324,GO:0030326,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030587,GO:0030659,GO:0030667,GO:0030900,GO:0031090,GO:0031149,GO:0031150,GO:0031154,GO:0031224,GO:0031226,GO:0031293,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0031344,GO:0031345,GO:0031346,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031594,GO:0031674,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032091,GO:0032092,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032890,GO:0032892,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0033158,GO:0033160,GO:0033267,GO:0033554,GO:0033619,GO:0033673,GO:0033674,GO:0034205,GO:0034220,GO:0034641,GO:0034645,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035220,GO:0035222,GO:0035239,GO:0035253,GO:0035282,GO:0035295,GO:0035333,GO:0035577,GO:0036064,GO:0036211,GO:0036230,GO:0036269,GO:0036293,GO:0036303,GO:0036477,GO:0040011,GO:0040028,GO:0042058,GO:0042059,GO:0042063,GO:0042110,GO:0042119,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042303,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042391,GO:0042461,GO:0042462,GO:0042500,GO:0042582,GO:0042592,GO:0042633,GO:0042659,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0042982,GO:0042987,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043011,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043170,GO:0043198,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043299,GO:0043312,GO:0043392,GO:0043393,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043413,GO:0043473,GO:0043523,GO:0043524,GO:0043549,GO:0043588,GO:0043589,GO:0043603,GO:0043949,GO:0044057,GO:0044070,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044449,GO:0044459,GO:0044463,GO:0044464,GO:0044671,GO:0045055,GO:0045121,GO:0045137,GO:0045165,GO:0045176,GO:0045177,GO:0045184,GO:0045202,GO:0045296,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045732,GO:0045747,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046530,GO:0046649,GO:0046822,GO:0046824,GO:0046873,GO:0046903,GO:0046907,GO:0046983,GO:0048066,GO:0048143,GO:0048167,GO:0048190,GO:0048286,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048708,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048837,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050435,GO:0050673,GO:0050730,GO:0050732,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050806,GO:0050808,GO:0050818,GO:0050820,GO:0050839,GO:0050851,GO:0050852,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051336,GO:0051338,GO:0051340,GO:0051347,GO:0051348,GO:0051352,GO:0051402,GO:0051438,GO:0051444,GO:0051563,GO:0051580,GO:0051582,GO:0051588,GO:0051590,GO:0051604,GO:0051606,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0051960,GO:0051961,GO:0051962,GO:0051966,GO:0052547,GO:0052548,GO:0055037,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060047,GO:0060048,GO:0060070,GO:0060075,GO:0060173,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060998,GO:0060999,GO:0061053,GO:0061062,GO:0061097,GO:0061099,GO:0061136,GO:0061371,GO:0061458,GO:0061900,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070001,GO:0070011,GO:0070050,GO:0070085,GO:0070201,GO:0070482,GO:0070588,GO:0070765,GO:0070838,GO:0070887,GO:0070925,GO:0070997,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090087,GO:0090092,GO:0090287,GO:0090316,GO:0090596,GO:0090647,GO:0090702,GO:0097028,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098609,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098687,GO:0098771,GO:0098773,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098857,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099120,GO:0099177,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0106027,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0140029,GO:0140096,GO:0150034,GO:0198738,GO:1900006,GO:1900180,GO:1900182,GO:1901135,GO:1901137,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902041,GO:1902042,GO:1902043,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902903,GO:1902905,GO:1903050,GO:1903051,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903522,GO:1903789,GO:1903793,GO:1903827,GO:1903829,GO:1903844,GO:1903959,GO:1903961,GO:1904589,GO:1904591,GO:1904645,GO:1904646,GO:1904796,GO:1904797,GO:1904951,GO:1905037,GO:1905114,GO:1905906,GO:1905908,GO:1990535,GO:2000026,GO:2000058,GO:2000059,GO:2000060,GO:2000112,GO:2000113,GO:2000272,GO:2000677,GO:2000678,GO:2001023,GO:2001025,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238
-
0.00001619
56.0
View
LYD3_k127_415387_2
Methyltransferase domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000001956
228.0
View
LYD3_k127_415387_3
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
3.1.26.4
0.0000000000000000000000000000000000000000000000000005661
191.0
View
LYD3_k127_415387_4
PAC2 family
K07159
-
-
0.0000000000000000000000000000000000000001122
160.0
View
LYD3_k127_415387_5
Putative cell wall binding repeat 2
-
-
-
0.000000000000000000000000000000000001164
154.0
View
LYD3_k127_415387_6
Bacterial transferase hexapeptide repeat
K04042
-
2.3.1.157,2.7.7.23
0.000000000000000000000000000000000002824
140.0
View
LYD3_k127_415387_7
Domain of unknown function (DUF362)
-
-
-
0.000000000000000000000000000000005082
138.0
View
LYD3_k127_415387_8
metallopeptidase activity
K06974
-
-
0.0000000000000000000000000000001325
130.0
View
LYD3_k127_415387_9
SMART phosphoesterase PHP domain protein
-
-
-
0.000000000000000000000000000006914
127.0
View
LYD3_k127_4158029_0
Cupin domain
-
-
-
0.00000000000000000002421
93.0
View
LYD3_k127_4158029_1
Activator of Hsp90 ATPase homolog 1-like protein
-
-
-
0.0000000000000000004688
92.0
View
LYD3_k127_4192073_0
Aspartate carbamoyltransferase
K00609
GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.1.3.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311
377.0
View
LYD3_k127_4192073_1
Ribonucleoside-triphosphate reductase
K21636
-
1.1.98.6
0.00000000000000000000000000000000000000000000000009998
195.0
View
LYD3_k127_4192073_2
Belongs to the LDH MDH superfamily
K00024
-
1.1.1.37
0.00000000000000000000000000915
113.0
View
LYD3_k127_4242796_0
Protein of unknown function (DUF1512)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097
330.0
View
LYD3_k127_4242796_1
ATP-grasp domain
K22224
-
6.2.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000009845
252.0
View
LYD3_k127_4242796_2
Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val)
K01265
-
3.4.11.18
0.00000000000000000000000000000000000000000000000000000000000000000000001354
252.0
View
LYD3_k127_4242796_3
PFAM flavin reductase domain protein FMN-binding
-
-
-
0.000000000000000000000004146
106.0
View
LYD3_k127_427997_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K13798
-
2.7.7.6
1.723e-284
895.0
View
LYD3_k127_4305674_0
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552
550.0
View
LYD3_k127_4305674_1
Chorismate mutase type II
K14170
-
4.2.1.51,5.4.99.5
0.0000003526
53.0
View
LYD3_k127_4319784_0
S-adenosyl-l-methionine hydroxide adenosyltransferase
K22205
-
-
0.0000000000000000000000000000000000000000000000000000000000000001187
230.0
View
LYD3_k127_4319784_1
protein conserved in archaea
K09726
-
-
0.00000000000000000000000000000000002352
147.0
View
LYD3_k127_4319784_2
Hexapeptide repeat of succinyl-transferase
-
-
-
0.00000000000000000000000000002465
123.0
View
LYD3_k127_4319784_3
TIGRFAM MoaD family protein
K03636
-
-
0.00000000000525
70.0
View
LYD3_k127_4319784_4
Belongs to the eukaryotic ribosomal protein eS17 family
K02962
GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.0000003456
54.0
View
LYD3_k127_4382894_0
Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
K03639
-
4.1.99.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001267
284.0
View
LYD3_k127_4382894_1
Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
K02626
-
4.1.1.19
0.00000000000000000000000000000000000000000000000000000000000000000000000000005428
262.0
View
LYD3_k127_4382894_2
Involved in regulation of DNA replication
K10725
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000002822
256.0
View
LYD3_k127_4382894_3
Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
K07503
-
-
0.0000000000000000000000000000000000000000000000000072
190.0
View
LYD3_k127_4382894_4
Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
K03637
-
4.6.1.17
0.000000000000000000000000000000000000000002216
160.0
View
LYD3_k127_4382894_5
TIGRFAM molybdenum cofactor synthesis domain
K03638
-
2.7.7.75
0.000000000000000000000000000000000000000005289
161.0
View
LYD3_k127_4382894_6
tetratricopeptide repeat
-
-
-
0.000000000000000000000000006016
118.0
View
LYD3_k127_4382894_7
AAA domain
-
-
-
0.000000000000001022
84.0
View
LYD3_k127_4382894_8
Methyltransferase type 11
-
-
-
0.0000000000002239
77.0
View
LYD3_k127_4382894_9
regulatory protein, arsR
-
-
-
0.0000000002739
66.0
View
LYD3_k127_4437761_0
Beta-Casp domain
K07041
-
-
7.209e-211
673.0
View
LYD3_k127_4437761_1
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis
K04479
-
2.7.7.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531
331.0
View
LYD3_k127_4437761_2
Aminotransferase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647
312.0
View
LYD3_k127_4437761_3
D-isomer specific 2-hydroxyacid dehydrogenase catalytic region
K00058
-
1.1.1.399,1.1.1.95
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000049
284.0
View
LYD3_k127_4437761_4
Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation
K03433
-
3.4.25.1
0.0000000000000000000000000000000000000000000000000000000003509
209.0
View
LYD3_k127_4437761_5
Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
K06920
-
6.3.4.20
0.0000000000000000000000000000000000000000000000001976
184.0
View
LYD3_k127_4437761_6
Putative TM nitroreductase
-
-
-
0.0000000000000000000000000000000000734
139.0
View
LYD3_k127_4437761_7
Pfam:DUF552
K09152
-
-
0.0000000000000000000005098
102.0
View
LYD3_k127_4437761_8
QueT transporter
-
-
-
0.0000000000000008323
83.0
View
LYD3_k127_4437761_9
lysine biosynthesis protein LysW
K05826
-
-
0.00000004452
57.0
View
LYD3_k127_4447145_0
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
K02906
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127
319.0
View
LYD3_k127_4447145_1
50S ribosomal protein L4
K02930
-
-
0.00000000000000000000000000000000000000000000000000000000000408
215.0
View
LYD3_k127_4447145_2
Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
K00858
-
2.7.1.23
0.000000000000000000000000000000000000000000000002153
183.0
View
LYD3_k127_4447145_3
Functions by promoting the formation of the first peptide bond
K03263
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.00000000000000000000000000000000000000003119
155.0
View
LYD3_k127_4447145_4
Predicted membrane protein (DUF2070)
K08979
-
-
0.00000000000000000000000000000000000000006801
168.0
View
LYD3_k127_4447145_5
nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module
K07060
GO:0000469,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0030490,GO:0030684,GO:0030688,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1990904
-
0.000000000000000000000006
108.0
View
LYD3_k127_4468792_0
4Fe-4S single cluster domain
K06937
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013
369.0
View
LYD3_k127_4468792_1
3-beta hydroxysteroid dehydrogenase/isomerase family
K01784
-
5.1.3.2
0.00000000000000000000000000000000000000000000000000000000014
214.0
View
LYD3_k127_4468792_2
Cytidylyltransferase
K19712
-
2.7.7.62
0.00000000000000000000000000000007137
132.0
View
LYD3_k127_4468792_3
Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids
K17105
-
2.5.1.42
0.000000000000000000000000006252
122.0
View
LYD3_k127_4468792_4
Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
K02233
-
2.7.8.26
0.0000000000000001763
90.0
View
LYD3_k127_4468792_5
Protein of unknown function (DUF1616)
-
-
-
0.00001748
50.0
View
LYD3_k127_4490606_0
Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin
K13812
-
4.1.2.43,4.2.1.147
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196
453.0
View
LYD3_k127_4490606_1
Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
K01299
-
3.4.17.19
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309
410.0
View
LYD3_k127_4490606_2
Metal dependent phosphohydrolases with conserved 'HD' motif.
K06885
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000005756
273.0
View
LYD3_k127_4490606_3
Belongs to the eukaryotic ribosomal protein eS6 family
K02991
-
-
0.0000000000000000000001663
100.0
View
LYD3_k127_4490606_4
Protein of unknown function (DUF996)
-
-
-
0.000000000002581
75.0
View
LYD3_k127_4490606_6
transmembrane transporter activity
K08225
GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0015562,GO:0022857,GO:0042221,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085
-
0.000003477
59.0
View
LYD3_k127_4553473_0
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734
311.0
View
LYD3_k127_4553473_1
Belongs to the precorrin methyltransferase family
K02303
GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.1.1.107
0.000000000000000000000000000000000000000000000000000000657
197.0
View
LYD3_k127_4553473_2
Belongs to the precorrin methyltransferase family
K02302,K02303,K13542
-
1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4
0.0000000000000000000000000006358
123.0
View
LYD3_k127_4553473_3
Ribosomal protein L35Ae
K02917
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000001389
53.0
View
LYD3_k127_4563793_0
PFAM FAD dependent oxidoreductase
K07137
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895
568.0
View
LYD3_k127_4563793_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K04566
-
6.1.1.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608
518.0
View
LYD3_k127_4563793_2
SMART zinc finger, RanBP2-type
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403
372.0
View
LYD3_k127_4563793_3
-
-
-
-
0.000000000000000000000003277
108.0
View
LYD3_k127_4563793_4
COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase
-
-
-
0.0000000007515
68.0
View
LYD3_k127_4563793_5
Lysylphosphatidylglycerol synthase TM region
K07027
-
-
0.000000009046
67.0
View
LYD3_k127_4563793_6
Transcriptional regulator
K10947
-
-
0.00000004591
61.0
View
LYD3_k127_4563793_7
CAAX protease self-immunity
-
-
-
0.00008575
52.0
View
LYD3_k127_4563859_0
SMART Elongator protein 3 MiaB NifB
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841
371.0
View
LYD3_k127_4563859_1
Subtilase family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000002979
269.0
View
LYD3_k127_4563859_2
Oxidoreductase FAD-binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000009761
227.0
View
LYD3_k127_4563859_3
PFAM tRNA methyltransferase complex GCD14 subunit
K07442
-
2.1.1.219,2.1.1.220
0.000000000000000000000005619
106.0
View
LYD3_k127_4563859_4
DNA binding
-
-
-
0.000000000002393
77.0
View
LYD3_k127_4563859_5
alginic acid biosynthetic process
K12287
-
-
0.00000000001336
78.0
View
LYD3_k127_4563859_6
integral membrane protein
-
-
-
0.00002792
49.0
View
LYD3_k127_4593772_0
GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
K03665
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193
316.0
View
LYD3_k127_4593772_1
Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
K02492
-
1.2.1.70
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579
306.0
View
LYD3_k127_4593772_10
Contacts the emerging nascent chain on the ribosome
K03626
-
-
0.0000000000000000001942
92.0
View
LYD3_k127_4593772_11
Helix-turn-helix XRE-family like proteins
K03627
-
-
0.000000000000000001601
93.0
View
LYD3_k127_4593772_12
Uncharacterized protein conserved in archaea (DUF2110)
-
-
-
0.000000000000003954
85.0
View
LYD3_k127_4593772_2
PQQ enzyme repeat
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000002219
271.0
View
LYD3_k127_4593772_3
Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs
K07254
-
2.1.1.206
0.000000000000000000000000000000000000000000000000000007945
195.0
View
LYD3_k127_4593772_4
PFAM metal-dependent phosphohydrolase, HD sub domain
K06950
-
-
0.000000000000000000000000000000000000002362
152.0
View
LYD3_k127_4593772_5
Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes
K03136
-
-
0.0000000000000000000000000000000000003435
145.0
View
LYD3_k127_4593772_6
PUA domain containing protein
K07398
-
-
0.000000000000000000000000000000000002276
142.0
View
LYD3_k127_4593772_7
Uncharacterized ACR, COG1993
K09137
-
-
0.0000000000000000000000000000007505
125.0
View
LYD3_k127_4593772_8
serine threonine protein kinase
-
-
-
0.000000000000000000000000003485
116.0
View
LYD3_k127_4593772_9
Important for reducing fluoride concentration in the cell, thus reducing its toxicity
K06199
-
-
0.0000000000000000000003924
98.0
View
LYD3_k127_4608748_0
PFAM Myo-inositol-1-phosphate synthase
K01858
GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659
5.5.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011
408.0
View
LYD3_k127_4608748_1
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
K17870
-
1.6.3.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476
359.0
View
LYD3_k127_4608748_2
PFAM Xylose isomerase domain protein TIM barrel
K01151
-
3.1.21.2
0.000000000000000000000000000000000001226
144.0
View
LYD3_k127_4608748_3
Domain of unknown function (DU1801)
-
-
-
0.00000000000000000000000000000000001147
139.0
View
LYD3_k127_4608748_4
Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
K02437
GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576
-
0.0000000000000000000000000000001342
128.0
View
LYD3_k127_46315_0
Belongs to the RtcB family
K14415
GO:0000394,GO:0003674,GO:0003824,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360
6.5.1.3
5.692e-197
625.0
View
LYD3_k127_46315_1
PFAM PEGA domain
-
-
-
0.0000000000000000000000000000000000000000000000004664
189.0
View
LYD3_k127_46315_2
PFAM beta-lactamase domain protein
-
-
-
0.00000000000000000000000252
109.0
View
LYD3_k127_46315_3
Dodecin
K09165
-
-
0.0000000000000007761
78.0
View
LYD3_k127_46315_4
sequence-specific DNA binding
-
-
-
0.00000001873
64.0
View
LYD3_k127_46315_5
Transcription elongation factor Elf1 like
-
-
-
0.00008835
48.0
View
LYD3_k127_466384_0
Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea
K00096
-
1.1.1.261
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064
347.0
View
LYD3_k127_466384_1
Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs
K11131
GO:0000154,GO:0000495,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016556,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031120,GO:0031123,GO:0031126,GO:0033979,GO:0034470,GO:0034641,GO:0034660,GO:0034964,GO:0040031,GO:0042254,GO:0043144,GO:0043170,GO:0043412,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990481
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154
330.0
View
LYD3_k127_466384_2
Peptidyl-prolyl cis-trans
K01802
-
5.2.1.8
0.00000000000000000000000000000000000000000000000000000000002626
214.0
View
LYD3_k127_466384_3
Belongs to the eukaryotic ribosomal protein eL14 family
K02875
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000001699
116.0
View
LYD3_k127_466384_4
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
K06996
-
-
0.00000000000000000000000002606
112.0
View
LYD3_k127_4680400_0
Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by
K00053
-
1.1.1.86
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049
502.0
View
LYD3_k127_4680400_1
ThiF family
K21029
-
2.7.7.80
0.000000000000000000000000000000000000000000000000000000000000003921
229.0
View
LYD3_k127_4680400_2
TIR domain
-
-
-
0.000000000000000000000000000009566
121.0
View
LYD3_k127_4680400_3
Belongs to the RecA family
K10872,K14545
GO:0000003,GO:0000018,GO:0000150,GO:0000166,GO:0000217,GO:0000228,GO:0000280,GO:0000400,GO:0000709,GO:0000724,GO:0000725,GO:0000730,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006311,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0007130,GO:0007131,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010520,GO:0010564,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0022607,GO:0030554,GO:0031323,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0033043,GO:0033554,GO:0034622,GO:0034641,GO:0035639,GO:0035822,GO:0035825,GO:0036094,GO:0040020,GO:0042148,GO:0042623,GO:0042802,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044877,GO:0045003,GO:0045132,GO:0045143,GO:0046483,GO:0048285,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051128,GO:0051171,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051445,GO:0051716,GO:0051726,GO:0051783,GO:0060255,GO:0060631,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070192,GO:0070193,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090735,GO:0097159,GO:0097367,GO:0098813,GO:0140013,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1903046,GO:1905334,GO:2000241
-
0.00000001949
63.0
View
LYD3_k127_4706397_0
phosphoglycerate mutase
K15635
-
5.4.2.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417
397.0
View
LYD3_k127_4706397_1
Spore germination protein
K03294
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004809
288.0
View
LYD3_k127_4706397_2
Calcineurin-like phosphoesterase superfamily domain
K07095
-
-
0.000000000000000000000000000000000000000000000002388
177.0
View
LYD3_k127_4706397_3
4Fe-4S single cluster domain
-
-
-
0.0000000000000000000000000000000000000000000004563
175.0
View
LYD3_k127_4706397_4
HAD-hyrolase-like
K07025
-
-
0.0000000000000006609
87.0
View
LYD3_k127_4706397_5
DEAD H associated
K03724
-
-
0.0000000000000266
73.0
View
LYD3_k127_4706397_6
Transcriptional regulator
-
-
-
0.0000000007917
63.0
View
LYD3_k127_4717774_0
PFAM tRNA synthetase, class II (G, H, P and S)
K01880
GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101
6.1.1.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235
545.0
View
LYD3_k127_4717774_1
Starch synthase catalytic domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346
529.0
View
LYD3_k127_4717774_2
PFAM transferase hexapeptide repeat containing protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007834
436.0
View
LYD3_k127_4717774_3
PFAM UbiA prenyltransferase
K17105
-
2.5.1.42
0.000000000000000000000000000000000000000000000000003658
192.0
View
LYD3_k127_4717774_4
tRNA intron endonuclease, N-terminal domain
K01170
-
4.6.1.16
0.000000000000000000000000000000000000000000000000004218
187.0
View
LYD3_k127_4717774_5
cation diffusion facilitator family transporter
-
-
-
0.000000000000000000000000000000000000000006238
165.0
View
LYD3_k127_4717774_6
Protein of unknown function (DUF454)
K09790
-
-
0.000000000000000000000000000000000005524
140.0
View
LYD3_k127_4717774_7
Conserved protein implicated in secretion
-
-
-
0.0000000000000000000000000000000002889
140.0
View
LYD3_k127_4717774_8
Protein of unknown function DUF47
K07220
-
-
0.00000000000000000000002539
108.0
View
LYD3_k127_4781034_0
Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
K08963
-
5.3.1.23
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541
355.0
View
LYD3_k127_4781034_1
PFAM tRNA synthetase, class II (G, H, P and S)
K01892
-
6.1.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002151
298.0
View
LYD3_k127_4781034_2
PFAM Sugar isomerase (SIS)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002755
293.0
View
LYD3_k127_4781034_3
Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
K07558
-
2.7.7.72
0.00000000000000000000000000000000000000000000000000000000000000000000000000000004076
284.0
View
LYD3_k127_4781034_4
Phosphoribosyl transferase domain
K00759,K09685
-
2.4.2.7
0.00000000000000000000000000000000000000000000000000001181
197.0
View
LYD3_k127_4781034_5
Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
K01975
-
3.1.4.58
0.00000000000000000000000000000000000000005113
158.0
View
LYD3_k127_4781034_6
tRNA intron endonuclease, N-terminal domain
K01170
-
4.6.1.16
0.00000000000000000000000000000000785
134.0
View
LYD3_k127_4781034_7
Transcriptional regulator
-
-
-
0.0000001829
55.0
View
LYD3_k127_479063_0
Alcohol dehydrogenase GroES-like domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684
392.0
View
LYD3_k127_479063_1
DeoC/LacD family aldolase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082
368.0
View
LYD3_k127_479063_2
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
K07304,K12267
-
1.8.4.11,1.8.4.12
0.000000000000000000000000000000000000000000000000000000000002929
210.0
View
LYD3_k127_479063_3
Nitroreductase family
-
-
-
0.00000000000000000000000000000000000000000000002757
177.0
View
LYD3_k127_479063_4
Cupin domain
-
-
-
0.000000000000000000000000000000000000000009189
156.0
View
LYD3_k127_479063_5
Mechanosensitive ion channel
K03442
-
-
0.000000000000003134
85.0
View
LYD3_k127_4793201_0
BadF/BadG/BcrA/BcrD ATPase family
K04114
-
1.3.7.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008511
365.0
View
LYD3_k127_4793201_1
PFAM ATPase, BadF BadG BcrA BcrD type
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000007857
242.0
View
LYD3_k127_4793201_2
2-hydroxyglutaryl-CoA dehydratase, D-component
K04112
-
1.3.7.8
0.000000000000000000000000000000000000000000000000000001472
199.0
View
LYD3_k127_4793201_3
4 iron, 4 sulfur cluster binding
K00205,K02573
-
-
0.00000000000000000006566
92.0
View
LYD3_k127_4801895_0
Protein of unknown function (DUF521)
K09123
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945
384.0
View
LYD3_k127_4801895_1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939
340.0
View
LYD3_k127_4801895_2
Belongs to the UPF0107 family
K09128
-
-
0.0000000000000000000000000000000000006327
145.0
View
LYD3_k127_4801895_3
GHMP kinases C terminal
K00869
-
2.7.1.36
0.00000000000000000000003855
104.0
View
LYD3_k127_4814413_0
DNA ligase (ATP) activity
K01971
-
6.5.1.1
0.00000000000000000000000000000000000000000000000000000000000000002193
233.0
View
LYD3_k127_4814413_1
With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
K10979
-
-
0.00000000000000000000000000000000000000000000000004389
188.0
View
LYD3_k127_4814413_2
PRC-barrel domain protein
-
-
-
0.0000000000000001633
85.0
View
LYD3_k127_4814413_3
COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
K07466
-
-
0.000000000000002018
84.0
View
LYD3_k127_4814413_4
DNA ligase
K01971
-
6.5.1.1
0.000000001681
59.0
View
LYD3_k127_4819265_0
AAA domain (Cdc48 subfamily)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799
445.0
View
LYD3_k127_4820680_0
PFAM Radical SAM domain protein
K22227
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329
409.0
View
LYD3_k127_4820680_1
PFAM phosphatidate cytidylyltransferase
-
-
-
0.000000007753
67.0
View
LYD3_k127_4820680_2
phosphoserine phosphatase
K01079
GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0004722,GO:0005488,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016597,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0031406,GO:0036094,GO:0036211,GO:0040007,GO:0042578,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
3.1.3.3
0.0000000103
67.0
View
LYD3_k127_4845330_0
Bacterio-opsin activator HTH
K06930
-
-
0.000000000000000000006158
98.0
View
LYD3_k127_4845330_1
Low molecular weight phosphotyrosine protein phosphatase
K03741
-
1.20.4.1
0.00000000000000000003331
93.0
View
LYD3_k127_4865397_0
CoA binding domain
K01905,K09181,K22224
-
6.2.1.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337
602.0
View
LYD3_k127_488348_0
Plug domain of Sec61p
K10956
GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005784,GO:0005789,GO:0005791,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0008320,GO:0008565,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0019538,GO:0019941,GO:0022804,GO:0022857,GO:0022884,GO:0030163,GO:0030433,GO:0030867,GO:0030970,GO:0031090,GO:0031204,GO:0031224,GO:0031984,GO:0032527,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0042175,GO:0042221,GO:0042277,GO:0042886,GO:0042887,GO:0043021,GO:0043022,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0044877,GO:0045047,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0065002,GO:0070727,GO:0070843,GO:0070972,GO:0071256,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0098588,GO:0098796,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903513,GO:1904680
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295
392.0
View
LYD3_k127_488348_1
With S4 and S12 plays an important role in translational accuracy
K02988
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001804
261.0
View
LYD3_k127_488348_2
This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
K02933
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000003853
201.0
View
LYD3_k127_488348_3
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
K02881
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000001274
200.0
View
LYD3_k127_488348_4
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000000000000000000000000000000000000000001598
173.0
View
LYD3_k127_488348_5
Ribosomal protein L30
K02907
GO:0000463,GO:0000470,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000997
147.0
View
LYD3_k127_488348_6
binds to the 23S rRNA
K02885
-
-
0.00000000000000000000000000000000141
134.0
View
LYD3_k127_488348_7
Belongs to the eukaryotic ribosomal protein eL32 family
K02912
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000000000000000001691
136.0
View
LYD3_k127_488348_8
Binds to the 23S rRNA
K02876
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000003211
112.0
View
LYD3_k127_488348_9
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.0000000000001772
76.0
View
LYD3_k127_490570_0
DegT/DnrJ/EryC1/StrS aminotransferase family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486
472.0
View
LYD3_k127_490570_1
PFAM Aldehyde ferredoxin oxidoreductase
K03738
-
1.2.7.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001257
276.0
View
LYD3_k127_490570_2
Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
K00826
-
2.6.1.42
0.000000000000000000000000000000000000000000000000000000000001187
215.0
View
LYD3_k127_4916752_0
PFAM Coenzyme F420 hydrogenase dehydrogenase beta subunit
K22174
-
1.1.98.4
0.00000000000000000000000000000000134
140.0
View
LYD3_k127_4916752_1
cytochrome-c peroxidase activity
-
-
-
0.00000000008125
71.0
View
LYD3_k127_4916752_2
Catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form coenzyme F420-0-glutamyl-glutamate (F420-2) or polyglutamated F420 derivatives
K12234
-
6.3.2.31,6.3.2.34
0.0000000005452
62.0
View
LYD3_k127_4921130_0
Pyruvate ferredoxin flavodoxin oxidoreductase
K00174
-
1.2.7.11,1.2.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381
545.0
View
LYD3_k127_4921130_1
TIGRFAM 2-oxoacid acceptor oxidoreductase, beta subunit, pyruvate 2-ketoisovalerate family
K00175
-
1.2.7.11,1.2.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000003306
262.0
View
LYD3_k127_4941915_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.9
8.763e-262
829.0
View
LYD3_k127_4941915_1
Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate
K06989
-
1.4.1.21
0.0000000000000000000000000000000000000000183
162.0
View
LYD3_k127_4941915_2
thiamine transport
K16789
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000000578
54.0
View
LYD3_k127_4958161_0
Belongs to the eukaryotic ribosomal protein eS4 family
K02987
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000000000000001586
237.0
View
LYD3_k127_4958161_1
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
K02931
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000000000009014
220.0
View
LYD3_k127_4958161_2
Binds 16S rRNA, required for the assembly of 30S particles
K02954
GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008270,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:1990904
-
0.000000000000000005701
84.0
View
LYD3_k127_4958161_3
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
-
-
0.0000002238
53.0
View
LYD3_k127_4971855_0
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
GO:0003674,GO:0003824,GO:0004360,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.6.1.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034
312.0
View
LYD3_k127_4971855_1
Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into
K04799
-
-
0.000000000000000000000000000000000000000000000000005293
186.0
View
LYD3_k127_4999415_0
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate
K03330
GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.3.5.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661
518.0
View
LYD3_k127_5001014_0
Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP
K01974
GO:0003674,GO:0003824,GO:0003963,GO:0009975,GO:0016874,GO:0016886,GO:0140098
6.5.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000006938
258.0
View
LYD3_k127_5001014_1
PFAM S-layer
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000009669
247.0
View
LYD3_k127_5001014_2
Methyltransferase
K15429
-
2.1.1.228
0.0000000000000000000000000000000000000000000000000000000000000000003569
242.0
View
LYD3_k127_5001014_3
Domain of unknown function (DUF371)
K09738
-
-
0.0000000000000000000000000000000005689
135.0
View
LYD3_k127_5001014_4
Acylphosphatase
K01512
-
3.6.1.7
0.00000000000000000000000001377
111.0
View
LYD3_k127_5001014_5
Methyladenine glycosylase
K01246
-
3.2.2.20
0.00000000000000000002963
97.0
View
LYD3_k127_5003622_0
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
K03431
-
5.4.2.10
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014
376.0
View
LYD3_k127_5003622_1
Bacterial transferase hexapeptide repeat
K04042
-
2.3.1.157,2.7.7.23
0.0000000000000000000000000000000000000000000000000000000000000001727
229.0
View
LYD3_k127_5003622_2
Belongs to the carbohydrate kinase PfkB family
K00852
-
2.7.1.15
0.0000000000000000000000000000000000000000000008581
180.0
View
LYD3_k127_5003622_3
Peptidase A24A, prepilin type IV
K07991
-
3.4.23.52
0.0006317
43.0
View
LYD3_k127_5028237_0
Glycosyl transferase 4-like
-
-
-
0.00000000000000000000000000000000000000001055
168.0
View
LYD3_k127_503759_0
PFAM Thiamine pyrophosphate
K00170
-
1.2.7.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001775
276.0
View
LYD3_k127_503759_1
Belongs to the UPF0282 family
K07022
-
-
0.00000000000000000000000000000000000000000000000000000000000001317
228.0
View
LYD3_k127_503759_2
PFAM Uncharacterised protein family UPF0016
-
-
-
0.0000000000000000000000000000000000000000000000000002224
192.0
View
LYD3_k127_503759_3
SnoaL-like polyketide cyclase
-
-
-
0.00000000000000003534
87.0
View
LYD3_k127_503759_4
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
K07304
-
1.8.4.11
0.000003752
49.0
View
LYD3_k127_5073395_0
Aldehyde ferredoxin oxidoreductase, N-terminal domain
K03738
-
1.2.7.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197
324.0
View
LYD3_k127_5073395_1
PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein
-
-
-
0.000000000000000000000000000004868
126.0
View
LYD3_k127_5073395_2
COG1977 Molybdopterin converting factor, small subunit
K03636
-
-
0.000000002365
61.0
View
LYD3_k127_5073395_3
Aldehyde ferredoxin oxidoreductase
K03738
-
1.2.7.5
0.000008581
51.0
View
LYD3_k127_5122570_0
oxidation-reduction process
-
-
-
3.355e-285
910.0
View
LYD3_k127_5122570_1
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.0000000000000000000000000000000000000000000002346
173.0
View
LYD3_k127_5122570_2
-
-
-
-
0.00000000003188
70.0
View
LYD3_k127_5122570_3
Protein of unknown function DUF131
-
-
-
0.0006339
46.0
View
LYD3_k127_513908_0
Phosphofructokinase
K00850
-
2.7.1.11
0.0000000000000000000000000000000003542
134.0
View
LYD3_k127_513908_1
PFAM Methyltransferase type 11
-
-
-
0.00000000001418
70.0
View
LYD3_k127_513908_2
COG0456 Acetyltransferases
K03789
-
2.3.1.128
0.00008006
51.0
View
LYD3_k127_5139540_0
Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
K00763
-
6.3.4.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864
438.0
View
LYD3_k127_5139540_1
Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules
K04483
GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478
364.0
View
LYD3_k127_5139540_2
Belongs to the UPF0219 family
K01641
-
2.3.3.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002402
301.0
View
LYD3_k127_5139540_3
Thiolase, N-terminal domain
K00626
-
2.3.1.9
0.00000000000000000000000000000000000000000000000000000004279
211.0
View
LYD3_k127_5139540_4
COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
K07466
-
-
0.0000000000000000001182
91.0
View
LYD3_k127_5139540_5
-
-
-
-
0.00004741
51.0
View
LYD3_k127_517156_0
PFAM tRNA synthetase, class II (D, K and N)
K01893
-
6.1.1.22
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499
370.0
View
LYD3_k127_517156_1
TIGRFAM geranylgeranyl reductase
K17830
-
1.3.1.101,1.3.7.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445
357.0
View
LYD3_k127_517156_2
PFAM regulatory protein AsnC Lrp family
K03718
-
-
0.0000000000000000000000000000000000000000000141
167.0
View
LYD3_k127_517156_3
HxlR-like helix-turn-helix
-
-
-
0.00000000000000000003315
96.0
View
LYD3_k127_517156_4
Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
K01596
-
4.1.1.32
0.00000000000004352
74.0
View
LYD3_k127_5198252_0
TIGRFAM Shikimate kinase
K00891
GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.7.1.71
0.000000000000000000000000000000000000000000000000000000000001223
219.0
View
LYD3_k127_5198252_1
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
K00014,K00891,K03785
-
1.1.1.25,2.7.1.71,4.2.1.10
0.000000000000000000000000000000000000001462
153.0
View
LYD3_k127_5198252_2
Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
K00800
GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576
2.5.1.19
0.000000000000000000000000000989
118.0
View
LYD3_k127_5226376_0
phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
K01923
-
6.3.2.6
0.0000000000000000000000000005813
115.0
View
LYD3_k127_5226376_1
heterodisulfide reductase, subunit
K03389
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
0.0000000000000000000000000007137
117.0
View
LYD3_k127_5226376_2
4Fe-4S dicluster domain
K03390
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
0.00000000000000000000000004777
115.0
View
LYD3_k127_5252320_0
ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
K02006
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009431
324.0
View
LYD3_k127_5252320_1
Cobalt uptake substrate-specific transmembrane region
K02007
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000006826
283.0
View
LYD3_k127_5252320_2
Transcriptional regulator
K07730
-
-
0.0000000000000000000000000000000000000000006355
164.0
View
LYD3_k127_5286893_0
PFAM glycosyl transferase, family 35
K00688
-
2.4.1.1
2.055e-204
653.0
View
LYD3_k127_5286893_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.000000000000000000000000000000000000000000000000006729
199.0
View
LYD3_k127_5286893_2
Flavin reductase-like protein
-
-
-
0.00002382
51.0
View
LYD3_k127_5304819_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
5.45e-270
849.0
View
LYD3_k127_5304819_1
damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
K03702
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746
359.0
View
LYD3_k127_5327248_0
-
-
-
-
0.0000000000000000000000000000000000000004241
166.0
View
LYD3_k127_5432151_0
Iron-sulfur cluster-binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631
408.0
View
LYD3_k127_5432151_1
SMART Elongator protein 3 MiaB NifB
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000001321
269.0
View
LYD3_k127_5432151_2
PFAM Aminotransferase class I and II
K04720
-
4.1.1.81
0.00000000000000000000000000000000000000000000000000000000000000000000001848
255.0
View
LYD3_k127_5432151_3
aldo keto reductase
K07079
-
-
0.0000000000000000000000000000000000000000000000005455
184.0
View
LYD3_k127_5432151_4
Glycosyltransferase like family 2
-
-
-
0.00000000000000000000000000000000000000002691
160.0
View
LYD3_k127_5432151_5
Domain of unknown function (DUF1957)
K16149
-
2.4.1.18
0.0000000000000000000000000000000000000009552
162.0
View
LYD3_k127_5432151_6
Domain of unknown function (DUF362)
-
-
-
0.0000000000000000000000000000002056
135.0
View
LYD3_k127_5432151_7
Belongs to the glycosyl hydrolase 5 (cellulase A) family
-
-
-
0.000000000000000000000001427
116.0
View
LYD3_k127_5432151_8
aldo keto reductase
K07079
-
-
0.0000000000000000002035
90.0
View
LYD3_k127_5432151_9
-
-
-
-
0.00005581
52.0
View
LYD3_k127_5469349_0
PFAM band 7 protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008896
318.0
View
LYD3_k127_5469349_1
Trypsin
K04771
-
3.4.21.107
0.00000000000000000000000000000000000000000000000000132
194.0
View
LYD3_k127_5469349_2
kinase, sugar kinase superfamily
K06982
-
2.7.1.169
0.0000000000000000000000000000000000000000000003633
177.0
View
LYD3_k127_5469349_3
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
K00549
-
2.1.1.14
0.000000000000000000000000000000000000000000001211
178.0
View
LYD3_k127_5469349_4
PFAM histidine triad (HIT) protein
K02503
-
-
0.0000000000000000000000000000001741
129.0
View
LYD3_k127_5469349_5
-
-
-
-
0.00000000000000000000000001006
119.0
View
LYD3_k127_5469349_6
glycolate biosynthetic process
K01091,K06019
-
3.1.3.18,3.6.1.1
0.00000000000000000002514
99.0
View
LYD3_k127_5469349_7
Transcriptional regulator
K07332
-
-
0.0000000000000000007028
94.0
View
LYD3_k127_5469349_8
Membrane-bound serine protease (ClpP class)
K07403
-
-
0.000000000006663
72.0
View
LYD3_k127_5470903_0
GTPase of
K06942
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538
419.0
View
LYD3_k127_5470903_1
Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids
K15888
-
2.5.1.89
0.000000000000000000000000000000000000000000000000007531
183.0
View
LYD3_k127_5493055_0
Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
K00946
-
2.7.4.16
0.0000000000000000000000000000000000000000000000000002941
197.0
View
LYD3_k127_5493055_1
Putative SAM-dependent RNA methyltransferase
K16317
-
2.1.1.257
0.0000004895
55.0
View
LYD3_k127_5520528_0
Conserved region in glutamate synthase
-
-
-
4.235e-231
724.0
View
LYD3_k127_5520528_1
Glutamine amidotransferases class-II
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142
508.0
View
LYD3_k127_5520528_2
PFAM chaperonin Cpn60 TCP-1
K22447
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0042802,GO:0044183,GO:0051082,GO:0061077
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064
448.0
View
LYD3_k127_5520528_3
Pyridine nucleotide-disulphide oxidoreductase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172
376.0
View
LYD3_k127_5520528_4
4Fe-4S ferredoxin iron-sulfur binding domain protein
K00196
-
-
0.0000000000000000000000000000000000000000000000000000000001386
206.0
View
LYD3_k127_5520528_5
Phosphate uptake regulator
-
-
-
0.0000000000000000000000000000000000000000000000008144
188.0
View
LYD3_k127_5520528_6
GXGXG motif
-
-
-
0.000000000000003766
78.0
View
LYD3_k127_5523472_0
Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
K00641
GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.3.1.31
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000011
278.0
View
LYD3_k127_5523472_1
Methionine biosynthesis protein MetW
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000126
225.0
View
LYD3_k127_5523472_2
TIGRFAM hisA hisF family protein
K01814
GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.3.1.16
0.0000000000000000000000000000000000000006736
157.0
View
LYD3_k127_5523472_3
O-methyltransferase
-
-
-
0.0000000000000000000000000001508
117.0
View
LYD3_k127_5523472_4
-
-
-
-
0.00000000000000697
79.0
View
LYD3_k127_5523472_5
Methylase involved in ubiquinone menaquinone biosynthesis
-
-
-
0.00000000000001213
73.0
View
LYD3_k127_5523472_6
Methylase involved in ubiquinone menaquinone biosynthesis
-
-
-
0.0000000000008448
68.0
View
LYD3_k127_5523472_7
Thioredoxin
-
-
-
0.00000000002399
69.0
View
LYD3_k127_5527139_0
Flavodoxin
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791
456.0
View
LYD3_k127_5527139_1
PFAM Glycosyl transferase, group 1
-
GO:0003674,GO:0003824,GO:0016740,GO:0016757
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914
439.0
View
LYD3_k127_5527139_10
Metal dependent phosphohydrolases with conserved 'HD' motif.
-
-
-
0.000000000000000006074
92.0
View
LYD3_k127_5527139_11
Glutathione S-transferase, N-terminal domain
-
-
-
0.000000000000000008087
87.0
View
LYD3_k127_5527139_12
Uncharacterized protein conserved in archaea (DUF2095)
-
-
-
0.0000000000000000883
85.0
View
LYD3_k127_5527139_13
Mo-molybdopterin cofactor metabolic process
-
-
-
0.00000009516
54.0
View
LYD3_k127_5527139_2
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
K00382
-
1.8.1.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619
433.0
View
LYD3_k127_5527139_3
Destroys radicals which are normally produced within the cells and which are toxic to biological systems
K04564
-
1.15.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008598
288.0
View
LYD3_k127_5527139_4
Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000001726
260.0
View
LYD3_k127_5527139_5
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.0000000000000000000000000000000000000000000000000000000000000000000000002072
253.0
View
LYD3_k127_5527139_6
PFAM Rubrerythrin
-
-
-
0.0000000000000000000000000000000000000000000000000000000007357
205.0
View
LYD3_k127_5527139_7
Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
-
-
-
0.000000000000000000000000000000000000002597
149.0
View
LYD3_k127_5527139_8
Ferredoxin thioredoxin reductase catalytic beta chain
-
-
-
0.000000000000000000000000000000000000007504
151.0
View
LYD3_k127_5527139_9
Methyltransferase type 11
-
-
-
0.000000000000000000000000003452
119.0
View
LYD3_k127_5597062_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239
351.0
View
LYD3_k127_5597062_1
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000005851
273.0
View
LYD3_k127_563422_0
Domain of unknown function (DUF296)
-
-
-
0.000000000000000000000000000000000000000001803
160.0
View
LYD3_k127_563422_1
Oxidoreductase molybdopterin binding domain
-
-
-
0.000000000000000000000000000000000000000003408
161.0
View
LYD3_k127_563422_2
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis
K04479
-
2.7.7.7
0.00000000000000000001305
96.0
View
LYD3_k127_565260_0
Uncharacterized protein conserved in bacteria (DUF2090)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449
302.0
View
LYD3_k127_565260_1
Bacterial fructose-1,6-bisphosphatase, glpX-encoded
K02446
-
3.1.3.11
0.0000000000000000000000000000000000000000000000000000000000000008891
230.0
View
LYD3_k127_565260_2
TIGRFAM HAD-superfamily hydrolase, subfamily IIB
-
-
-
0.0002068
51.0
View
LYD3_k127_5658555_0
COG2217 Cation transport ATPase
K01534
-
3.6.3.3,3.6.3.5
0.000000000000000000000001562
111.0
View
LYD3_k127_5658555_1
4Fe-4S single cluster domain
-
-
-
0.0000000000000002978
81.0
View
LYD3_k127_5732410_0
Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
K00286
-
1.5.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000002083
252.0
View
LYD3_k127_5732410_1
Psort location Cytoplasmic, score 8.96
K01838
-
5.4.2.6
0.00000000000001208
80.0
View
LYD3_k127_5732410_2
Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups
K00555
-
2.1.1.215,2.1.1.216
0.00004319
48.0
View
LYD3_k127_5775106_0
PFAM Glycosyl transferase, group 1
K16150
-
2.4.1.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653
392.0
View
LYD3_k127_5775106_1
PFAM peptidase U62 modulator of DNA gyrase
K03568
GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0019538,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001614
287.0
View
LYD3_k127_5775106_2
modulator of DNA gyrase
K03592
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000266
286.0
View
LYD3_k127_5775106_3
PFAM glycosyl transferase group 1
K16150
-
2.4.1.11
0.000000000000000000000001073
111.0
View
LYD3_k127_584328_0
PFAM Sugar isomerase (SIS)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000001271
234.0
View
LYD3_k127_584328_1
Predicted metal-binding protein (DUF2284)
-
-
-
0.0000000000000000000000000000000000000000001906
164.0
View
LYD3_k127_584966_0
Belongs to the cysteine synthase cystathionine beta- synthase family
K01738
-
2.5.1.47
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363
439.0
View
LYD3_k127_584966_1
PFAM 4Fe-4S binding domain
-
-
-
0.0000000000000000000000000001759
120.0
View
LYD3_k127_5992972_0
Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA
K03265
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036
345.0
View
LYD3_k127_5992972_1
Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5- formyl-H(4)MPT) and methanofuran (MFR)
K00672
-
2.3.1.101
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000172
291.0
View
LYD3_k127_5992972_2
Inositol monophosphatase
K01092
-
3.1.3.25
0.0000000000000000000000000000000000000000001909
167.0
View
LYD3_k127_5993706_0
Catalyzes the synthesis of GMP from XMP
K01951
-
6.3.5.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041
553.0
View
LYD3_k127_5993706_1
COG1045 Serine acetyltransferase
K00640
-
2.3.1.30
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537
308.0
View
LYD3_k127_5993706_2
PFAM Cobyrinic acid a,c-diamide synthase
K07321
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000001928
276.0
View
LYD3_k127_5993706_3
helix_turn_helix ASNC type
-
-
-
0.0000000000000000000000000000000000000000000000000003513
188.0
View
LYD3_k127_5993706_4
thiamine-containing compound biosynthetic process
K02051
-
-
0.0000000000000000000000000000000000000002946
160.0
View
LYD3_k127_5993706_5
PFAM Cobyrinic acid a,c-diamide synthase
K07321
-
-
0.000000000000000002021
96.0
View
LYD3_k127_5993706_6
Belongs to the cysteine synthase cystathionine beta- synthase family
K01738
-
2.5.1.47
0.00001323
47.0
View
LYD3_k127_6012029_0
Involved in regulation of DNA replication
K10725
-
-
0.00000000000000000000000000000000000000000000000000000001551
210.0
View
LYD3_k127_6012029_1
Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
K03637
-
4.6.1.17
0.00000000000000000000000000000000000000000000002307
173.0
View
LYD3_k127_6012029_2
TIGRFAM molybdenum cofactor synthesis domain
K03638
-
2.7.7.75
0.0000000000000000000000000000000000007644
144.0
View
LYD3_k127_6012029_3
regulatory protein, arsR
-
-
-
0.0000000002612
64.0
View
LYD3_k127_6016709_0
Belongs to the phosphohexose mutase family
K01840,K03431,K15778
-
5.4.2.10,5.4.2.2,5.4.2.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519
368.0
View
LYD3_k127_6016709_1
Nucleotidyl transferase
K00966
-
2.7.7.13
0.000000000000000000000000000000000000000000009325
172.0
View
LYD3_k127_6021764_0
The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
K06001
-
4.2.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201
596.0
View
LYD3_k127_6021764_1
4Fe-4S single cluster domain
K06937
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149
528.0
View
LYD3_k127_6021764_2
PFAM CoA-binding domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158
455.0
View
LYD3_k127_6021764_3
PFAM ATP-NAD AcoX kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891
329.0
View
LYD3_k127_6021764_4
Belongs to the DegT DnrJ EryC1 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372
317.0
View
LYD3_k127_6021764_5
regulator of amino acid metabolism, contains ACT domain
K07103
-
-
0.000000000000000000000000000000000000002143
153.0
View
LYD3_k127_6021764_6
Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN)
K07732
-
2.7.1.161
0.00000000000000000001152
96.0
View
LYD3_k127_6021764_7
Cyclophilin-like
K09143
-
-
0.000000000000000007267
89.0
View
LYD3_k127_6021764_8
S25 ribosomal protein
K02975
-
-
0.000000002296
62.0
View
LYD3_k127_6021764_9
-
-
-
-
0.00002281
51.0
View
LYD3_k127_6035714_0
Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
K17758,K17759
-
4.2.1.136,5.1.99.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167
432.0
View
LYD3_k127_6035714_1
Appr-1-p processing domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000005296
227.0
View
LYD3_k127_6035714_2
pre-rRNA processing protein involved in ribosome biogenesis
K09140
GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
-
0.00000000000000000000000000000000000000000001561
168.0
View
LYD3_k127_6035714_3
LysE type translocator
-
-
-
0.00000000000000000000000000000000000587
144.0
View
LYD3_k127_6173150_0
zinc finger
-
-
-
0.000000000000000000000000000000000000008521
155.0
View
LYD3_k127_6173150_1
Involved in the binding of tRNA to the ribosomes
K02946
GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000004355
141.0
View
LYD3_k127_6173150_2
Beta-galactosidase
-
-
-
0.0000000000000000000000000000003104
135.0
View
LYD3_k127_6173150_3
Ammonium Transporter
K03320
-
-
0.0000002114
52.0
View
LYD3_k127_6214563_0
Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into
K04799
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401
374.0
View
LYD3_k127_6214563_1
Ribose-5-phosphate isomerase. Source PGD
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000001948
228.0
View
LYD3_k127_6214563_2
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.6.1.16
0.00000000000000000000008432
100.0
View
LYD3_k127_6244502_0
PFAM TCP-1 cpn60 chaperonin family
K22447
-
-
9.53e-205
650.0
View
LYD3_k127_6244502_1
glycoside hydrolase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923
617.0
View
LYD3_k127_6244502_2
PFAM amidohydrolase
K01464,K01465,K01466
-
3.5.2.2,3.5.2.3,3.5.2.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009784
300.0
View
LYD3_k127_6244502_3
Mut7-C RNAse domain
K09122
-
-
0.00000000000000000000000000000000000003176
149.0
View
LYD3_k127_6244502_4
RNA polymerase Rpb6
K03014
GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006354,GO:0006360,GO:0006366,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0016070,GO:0016591,GO:0018130,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
-
0.0000000000000001141
81.0
View
LYD3_k127_6286736_0
Protein of unknown function (DUF1464)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007275
454.0
View
LYD3_k127_6286736_1
TIGRFAM dihydropteroate synthase-related protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254
402.0
View
LYD3_k127_6286736_2
Catalyzes the condensation of 4-aminobenzoate (pABA) with 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta-ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P)
K06984
-
2.4.2.54
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098
364.0
View
LYD3_k127_6286736_3
TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ
K04034
-
1.21.98.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116
340.0
View
LYD3_k127_6286736_4
transferase activity, transferring glycosyl groups
K06984
-
2.4.2.54
0.000000000000000000000000000000000000000000000000000000000000000000000002297
255.0
View
LYD3_k127_6286736_5
Protein of unknown function (DUF447)
K09154
-
-
0.0000000000001541
79.0
View
LYD3_k127_63398_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
1.107e-238
763.0
View
LYD3_k127_63398_1
Protein of unknown function (DUF763)
K09003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015
392.0
View
LYD3_k127_63398_2
PFAM elongation factor Tu domain 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354
357.0
View
LYD3_k127_63398_3
Elongator protein 3, MiaB family, Radical SAM
K09711
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001622
250.0
View
LYD3_k127_63398_4
Putative RNA methyltransferase
K09142
-
-
0.00000000000000000000000000000000000000000000000000000000004018
217.0
View
LYD3_k127_63398_5
Sugar isomerase (SIS)
K15916
-
5.3.1.8,5.3.1.9
0.00000000000000000000000000000000000000000000000000000001273
207.0
View
LYD3_k127_63398_6
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02869
GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000007083
101.0
View
LYD3_k127_63398_7
Protein of unknown function (DUF998)
-
-
-
0.0000000000000002072
87.0
View
LYD3_k127_63398_8
integral membrane protein
K07027
-
-
0.0000000000003015
81.0
View
LYD3_k127_63398_9
COG3209 Rhs family protein
K20276
-
-
0.000006487
58.0
View
LYD3_k127_6359707_0
PFAM Radical SAM domain protein
K04069
-
1.97.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487
407.0
View
LYD3_k127_6359707_1
ATP phosphoribosyltransferase
K00765
-
2.4.2.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051
390.0
View
LYD3_k127_6359707_2
Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
K00013
-
1.1.1.23
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363
345.0
View
LYD3_k127_6359707_3
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
K02500
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986
325.0
View
LYD3_k127_6359707_4
PFAM Aminotransferase class I and II
K00817
-
2.6.1.9
0.00000000000000000000000000000000000000000000000000000000000009426
226.0
View
LYD3_k127_6359707_5
imidazoleglycerol-phosphate dehydratase
K01693
-
4.2.1.19
0.00000000000000000000000000000000000000000000000000000002818
202.0
View
LYD3_k127_6359707_6
1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
K01814
-
5.3.1.16
0.000000000000000000000000000000000000000000000000000001595
199.0
View
LYD3_k127_6359707_7
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
K02501
-
-
0.00000000000000000000000000000000000000000000000000003834
194.0
View
LYD3_k127_6359707_8
belongs to the PRA-CH family
K01496,K11755
-
3.5.4.19,3.6.1.31
0.0000000000000000000000000000000000000000002917
160.0
View
LYD3_k127_6359707_9
F420-0:Gamma-glutamyl ligase
-
-
-
0.000000000000000000000000003145
117.0
View
LYD3_k127_641455_0
protein tyrosine kinase activity
K03593
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556
313.0
View
LYD3_k127_641455_1
Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
K01754
-
4.3.1.19
0.00000000000000000000000000000000000000000000000000000000000000000000000000000003327
278.0
View
LYD3_k127_641455_2
Helix-turn-helix domain
K07731
-
-
0.00000000000000000000000000000000000000000000000000000000000001117
224.0
View
LYD3_k127_641455_3
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000001091
214.0
View
LYD3_k127_641455_4
Adenosine specific kinase
K09129
-
-
0.0000000000000000000000000000000000000000000000001109
179.0
View
LYD3_k127_641455_5
Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes
K03622
-
-
0.00000000000000000002539
93.0
View
LYD3_k127_641455_6
endonuclease containing a URI domain
K07461
-
-
0.0000000000000000007155
90.0
View
LYD3_k127_641455_7
Predicted RNA-binding protein
-
-
-
0.0009153
44.0
View
LYD3_k127_6431778_0
in RNase L inhibitor, RLI
K06174
-
-
5.441e-200
640.0
View
LYD3_k127_6431778_1
Relaxes both positive and negative superturns and exhibits a strong decatenase activity
K03167
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
5.99.1.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013
477.0
View
LYD3_k127_6431778_2
Relaxes both positive and negative superturns and exhibits a strong decatenase activity
K03166
-
5.99.1.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676
458.0
View
LYD3_k127_6431778_3
Glycosyl hydrolase
-
-
-
0.0000000000000001132
94.0
View
LYD3_k127_6433852_0
SMART DNA-directed DNA polymerase B
K02319
-
2.7.7.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432
597.0
View
LYD3_k127_6433852_1
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
K03500
-
2.1.1.176
0.0000000000000000000000000000000000003646
153.0
View
LYD3_k127_6435471_0
COG1112 Superfamily I DNA and RNA
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006062
369.0
View
LYD3_k127_6435471_1
PFAM Thiolase
K00626
-
2.3.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000003189
276.0
View
LYD3_k127_6435471_2
DUF35 OB-fold domain, acyl-CoA-associated
K07068
-
-
0.000000000000000001063
91.0
View
LYD3_k127_6435471_3
Pas domain
K12132
-
2.7.11.1
0.0000161
54.0
View
LYD3_k127_6438932_0
8-oxoguanine DNA glycosylase domain protein
K03660
-
4.2.99.18
0.00000000000000000000000000000000000000000000000000000000000000528
226.0
View
LYD3_k127_6438932_1
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K03234
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.00000000000000000000000000000000000000000000002042
179.0
View
LYD3_k127_6438932_2
-
-
-
-
0.0000000007819
62.0
View
LYD3_k127_648304_0
Archaeal transcriptional regulator TrmB
-
-
-
0.00000000000000000000000000000000000000000000006384
178.0
View
LYD3_k127_648304_1
TatD related DNase
K03424
-
-
0.00000000000000000000000000000000001633
144.0
View
LYD3_k127_648304_2
Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation
-
-
-
0.000000000000005861
76.0
View
LYD3_k127_648304_3
Radical SAM domain protein
K06937
-
-
0.0000002453
57.0
View
LYD3_k127_6483145_0
HELICc2
K10844
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000619
452.0
View
LYD3_k127_6483145_1
Proteasome endopeptidase complex
K03432
-
3.4.25.1
0.0000000000000000000000000000000000000000000000000000000000001255
218.0
View
LYD3_k127_6483145_2
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
0.000000000000000000000000000000000000000003574
162.0
View
LYD3_k127_6483145_3
Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids
K19664
-
2.7.7.67
0.0000000000000000000000000000000000005935
145.0
View
LYD3_k127_6483145_4
mRNA cleavage and polyadenylation factor CLP1 P-loop
K06947
-
-
0.000000000000000000000000000000003011
142.0
View
LYD3_k127_6483145_5
Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange
K04484
-
-
0.000000000000000000000000003369
119.0
View
LYD3_k127_6483145_6
DNA topoisomerase, type IA, central domain protein
K03168,K03169
-
5.99.1.2
0.00004266
50.0
View
LYD3_k127_6528197_0
Belongs to the IlvD Edd family
K01687
-
4.2.1.9
3.519e-213
674.0
View
LYD3_k127_6528197_1
Belongs to the carbamoyltransferase HypF family
K04656
-
-
2.883e-211
680.0
View
LYD3_k127_6528197_10
PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein
K00205
-
-
0.0000001353
59.0
View
LYD3_k127_6528197_12
PFAM regulatory protein, MarR
-
-
-
0.00002982
53.0
View
LYD3_k127_6528197_2
Catalyzes the condensation of pyruvate and acetyl- coenzyme A to form (R)-citramalate
K09011
-
2.3.1.182
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185
511.0
View
LYD3_k127_6528197_3
hydrogenase expression formation protein
K04654
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083
373.0
View
LYD3_k127_6528197_4
AIR synthase related protein, C-terminal domain
K04655
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002853
281.0
View
LYD3_k127_6528197_5
Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
K03593
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000004261
256.0
View
LYD3_k127_6528197_6
COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000005487
228.0
View
LYD3_k127_6528197_7
Hydrogenase/urease nickel incorporation, metallochaperone, hypA
K04651
-
-
0.00000000000000000000000000000000006954
137.0
View
LYD3_k127_6528197_8
PFAM nucleic acid binding, OB-fold, tRNA helicase-type
K07466
-
-
0.00000000000000000000000000000001369
142.0
View
LYD3_k127_6528197_9
PFAM hydrogenase expression formation protein (HUPF HYPC)
K04653
-
-
0.00000000000000001277
84.0
View
LYD3_k127_6565435_0
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001515
286.0
View
LYD3_k127_6565435_1
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000004619
259.0
View
LYD3_k127_6565435_2
Belongs to the carbohydrate kinase PfkB family
K00852
-
2.7.1.15
0.00000000000000000009195
90.0
View
LYD3_k127_6609443_0
Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
K00286
-
1.5.1.2
0.0000000000000000000000000000000000000000000000000000000000000000001624
238.0
View
LYD3_k127_6609443_1
TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3
K01838
-
5.4.2.6
0.00000000000000001831
88.0
View
LYD3_k127_6609443_2
Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups
K00555
GO:0001510,GO:0002940,GO:0003674,GO:0003824,GO:0004809,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.1.1.215,2.1.1.216
0.0000002997
55.0
View
LYD3_k127_6621129_0
Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs
K06176
-
5.4.99.27
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349
307.0
View
LYD3_k127_6621129_1
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K04794
-
3.1.1.29
0.000000000000000000000000000000000000003097
149.0
View
LYD3_k127_6621129_2
Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains
K17830
-
1.3.1.101,1.3.7.11
0.00000000000000000000000000001278
128.0
View
LYD3_k127_6623533_0
PFAM DNA alkylation repair enzyme
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606
326.0
View
LYD3_k127_6623533_1
Thiamine biosynthesis protein (ThiI)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217
315.0
View
LYD3_k127_6623533_2
methylthiotransferase activity
K15865
-
2.8.4.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000022
272.0
View
LYD3_k127_6623533_3
transcriptional regulators containing the CopG Arc MetJ DNA-binding domain
-
-
-
0.00000000889
58.0
View
LYD3_k127_6623533_4
COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
-
-
-
0.00001182
53.0
View
LYD3_k127_6624999_0
Belongs to the phosphoglycerate kinase family
K00927
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
2.7.2.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919
436.0
View
LYD3_k127_6624999_1
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.00000000000000000000000000007684
117.0
View
LYD3_k127_6624999_2
HAD-hyrolase-like
K07025
-
-
0.000000000000001686
85.0
View
LYD3_k127_6646425_0
Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
K01823
-
5.3.3.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228
322.0
View
LYD3_k127_6646425_1
Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids
K06981
-
2.7.4.26
0.0000000000000000000000000000000000000007136
156.0
View
LYD3_k127_6651693_0
Belongs to the eukaryotic ribosomal protein eL15 family
K02877
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000000000001509
238.0
View
LYD3_k127_6651693_1
Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends
K03539
-
3.1.26.5
0.000000000000004235
85.0
View
LYD3_k127_6651693_2
RNA binding
K07581
-
-
0.0000000006524
66.0
View
LYD3_k127_6651693_3
Ribosomal protein L13e
K02873
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000006058
51.0
View
LYD3_k127_677970_0
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516
472.0
View
LYD3_k127_687143_0
Aldehyde ferredoxin oxidoreductase, N-terminal domain
K03738
-
1.2.7.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913
454.0
View
LYD3_k127_687143_1
PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein
-
-
-
0.000000000000000000000000001867
115.0
View
LYD3_k127_690747_0
Multicopper oxidase
K06324
-
1.16.3.3
8.425e-201
646.0
View
LYD3_k127_690747_1
Sodium Bile acid symporter family
K03325
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000198
297.0
View
LYD3_k127_690747_10
PFAM CopG domain protein DNA-binding domain protein
-
-
-
0.000000000004115
67.0
View
LYD3_k127_690747_2
Psort location CytoplasmicMembrane, score 10.00
-
-
-
0.000000000000000000000000000000000000000000000000000000000000003662
228.0
View
LYD3_k127_690747_3
Translation initiation factor 2
K03237
GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000000000006205
225.0
View
LYD3_k127_690747_4
PFAM metallophosphoesterase
K06953
-
-
0.00000000000000000000000000000000000000000000000003582
188.0
View
LYD3_k127_690747_5
Inositol monophosphatase
K01092
-
3.1.3.25
0.000000000000000000000000000000000000000000002065
175.0
View
LYD3_k127_690747_6
Orotidine 5'-phosphate decarboxylase / HUMPS family
K01591
-
4.1.1.23
0.000000000000000000000000000000000000000002234
165.0
View
LYD3_k127_690747_7
PFAM low molecular weight phosphotyrosine protein phosphatase
K03741
-
1.20.4.1
0.0000000000000000000000000000000006016
134.0
View
LYD3_k127_690747_8
4Fe-4S binding domain
-
-
-
0.00000000000000000000121
98.0
View
LYD3_k127_690747_9
helix_turn_helix, Arsenical Resistance Operon Repressor
K03892,K21903
-
-
0.00000000000000003433
86.0
View
LYD3_k127_699874_0
Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails
K11600
GO:0000177,GO:0000178,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1905354
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575
303.0
View
LYD3_k127_699874_1
Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site
K12589
GO:0000177,GO:0000178,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0017091,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002948
286.0
View
LYD3_k127_699874_2
Shwachman-Bodian-Diamond syndrome (SBDS) protein
K14574
-
-
0.0000000000000000000000000000000000000000000000000000000000000003198
228.0
View
LYD3_k127_699874_3
Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome
K03679
GO:0000178,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016180,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031126,GO:0032991,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043144,GO:0043170,GO:0043628,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071034,GO:0071043,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354
-
0.000000000000000000000000000000000000000000000000000000000003507
216.0
View
LYD3_k127_699874_4
binds to the 23S rRNA
K02921
-
-
0.00000000000000003459
85.0
View
LYD3_k127_699874_5
Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation
K03432
GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019773,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
3.4.25.1
0.00001542
50.0
View
LYD3_k127_699965_0
Aconitase family (aconitate hydratase)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573
577.0
View
LYD3_k127_699965_1
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
K01251
GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657
3.3.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938
545.0
View
LYD3_k127_699965_2
SMART Elongator protein 3 MiaB NifB
K22227
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052
388.0
View
LYD3_k127_699965_3
PFAM TrkA-C domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000005557
229.0
View
LYD3_k127_699965_4
MgtE integral membrane
K07244
-
-
0.0000000000000000000000000000000000000000000000000000000000006022
225.0
View
LYD3_k127_699965_5
PHP domain
K07053
-
3.1.3.97
0.000000000000000000000000000000000551
140.0
View
LYD3_k127_699965_6
HTH DNA binding domain
-
-
-
0.0000000000001149
75.0
View
LYD3_k127_699965_7
AAA domain
K07028
-
-
0.00000000005309
71.0
View
LYD3_k127_701103_0
TIGRFAM glutamine synthetase, type I
K01915
-
6.3.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421
449.0
View
LYD3_k127_701103_1
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
-
GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016427,GO:0016428,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
-
0.000000000000000000000000000000000000000000000000001187
195.0
View
LYD3_k127_701103_2
Uncharacterised protein family (UPF0113)
K07565
-
-
0.00000005927
61.0
View
LYD3_k127_701103_3
Belongs to the NiCoT transporter (TC 2.A.52) family
K07241
-
-
0.000006107
49.0
View
LYD3_k127_705725_0
Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
K01596
-
4.1.1.32
9.629e-235
740.0
View
LYD3_k127_705725_1
Zn-dependent protease with chaperone function
K03799
-
-
0.00000000000000000000000000000000000000000000000000000000000001647
227.0
View
LYD3_k127_705725_2
Domain of unknown function DUF120
K07732
-
2.7.1.161
0.000000000000000000000000000000000000000000000000001304
190.0
View
LYD3_k127_705725_3
PFAM Metallo-beta-lactamase superfamily
-
-
-
0.00000000000000000000000000000000000000000000000005305
184.0
View
LYD3_k127_705725_4
ubiE/COQ5 methyltransferase family
-
-
-
0.000000000000000000000000001149
121.0
View
LYD3_k127_705725_5
Rhomboid family
K19225
-
3.4.21.105
0.00000000000000002792
87.0
View
LYD3_k127_711871_0
Radical_SAM C-terminal domain
K07739
-
2.3.1.48
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647
567.0
View
LYD3_k127_711871_1
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate
K09482
-
6.3.5.7
0.00000000000000000000001238
105.0
View
LYD3_k127_711871_2
Sodium Bile acid symporter family
K03325
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656
-
0.00000000000003974
73.0
View
LYD3_k127_711871_3
ribosomal protein S30
K02983
-
-
0.000000001274
60.0
View
LYD3_k127_711871_4
PFAM low molecular weight phosphotyrosine protein phosphatase
K03741
-
1.20.4.1
0.0000007178
51.0
View
LYD3_k127_711871_5
PFAM NADH ubiquinone oxidoreductase, 20
-
-
-
0.0000402
49.0
View
LYD3_k127_720073_0
PFAM AMP-dependent synthetase and ligase
K01895
-
6.2.1.1
1.247e-281
879.0
View
LYD3_k127_720073_1
TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01535,K01537
-
3.6.3.6,3.6.3.8
1.835e-253
812.0
View
LYD3_k127_720073_2
Major Facilitator Superfamily
K08177
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445
367.0
View
LYD3_k127_720073_3
GPR1 FUN34 yaaH family
K07034
-
-
0.00000000000000000000000000000000000000000000000000000000000000003193
228.0
View
LYD3_k127_720073_4
PFAM tRNA methyltransferase complex GCD14 subunit
K07442
-
2.1.1.219,2.1.1.220
0.000000000000000000000000000000132
128.0
View
LYD3_k127_720073_5
PFAM tRNA methyltransferase complex GCD14 subunit
K07442
-
2.1.1.219,2.1.1.220
0.000000000000000000000002194
108.0
View
LYD3_k127_730272_0
Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
K01007
-
2.7.9.2
6.226e-299
937.0
View
LYD3_k127_730272_1
Diphthamide
K07561
-
2.5.1.108
0.00000000000000000000000000000000000000000000000000000000003577
214.0
View
LYD3_k127_730272_2
Belongs to the universal ribosomal protein uL16 family
K02866
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000004119
146.0
View
LYD3_k127_730272_3
Putative RNA methylase family UPF0020
-
-
-
0.000000000000000000000000000000001207
145.0
View
LYD3_k127_777888_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
-
6.1.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198
535.0
View
LYD3_k127_777888_1
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
K00948
-
2.7.6.1
0.00000000000000000000000000000000000000000000000000000015
204.0
View
LYD3_k127_777888_2
PFAM Biotin lipoate A B protein ligase family
K03800
-
6.3.1.20
0.000000000000000000000000000000000000000000000000001982
191.0
View
LYD3_k127_777888_3
MiaB-like tRNA modifying enzyme
K15865
-
2.8.4.5
0.00000000004075
66.0
View
LYD3_k127_777888_4
HicB_like antitoxin of bacterial toxin-antitoxin system
-
-
-
0.00000002161
57.0
View
LYD3_k127_786671_0
B12 binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254
344.0
View
LYD3_k127_786671_1
B12 binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692
332.0
View
LYD3_k127_786671_10
4Fe-4S binding domain
-
-
-
0.00000108
53.0
View
LYD3_k127_786671_2
Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of MtrA
K00584
-
2.1.1.86
0.0000000000000000000000000000000000000000000000000000000000000003129
230.0
View
LYD3_k127_786671_3
Beta-galactosidase
-
-
-
0.0000000000000000000000000000000001223
145.0
View
LYD3_k127_786671_4
Beta-galactosidase
-
-
-
0.000000000000000000000000000001143
132.0
View
LYD3_k127_786671_5
Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
K12251
-
3.5.1.53
0.00000000000000000000000002959
115.0
View
LYD3_k127_786671_6
Adenosylcobinamide amidohydrolase
-
-
-
0.0000000000000000000001685
109.0
View
LYD3_k127_786671_7
B12 binding domain
-
-
-
0.00000000000003429
78.0
View
LYD3_k127_786671_8
COGs COG4743 membrane protein
-
-
-
0.00000000207
63.0
View
LYD3_k127_786671_9
ligase activity
K00666,K03892
-
-
0.00000004783
61.0
View
LYD3_k127_801771_0
Belongs to the HMG-CoA reductase family
K00021,K00054
-
1.1.1.34,1.1.1.88
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978
526.0
View
LYD3_k127_801771_1
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K03234
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099
298.0
View
LYD3_k127_801771_2
NADPH-dependent FMN reductase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009748
284.0
View
LYD3_k127_801771_3
exonuclease of the beta-lactamase fold involved in RNA processing
K07577
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000002642
253.0
View
LYD3_k127_801771_4
Flavoprotein
-
-
-
0.0000000000000000000000000000000000000000000000000000002154
199.0
View
LYD3_k127_801771_5
Belongs to the UPF0200 family
-
-
-
0.00000000000000000000000000000000000000000000003017
175.0
View
LYD3_k127_801771_7
by modhmm
-
-
-
0.000000000000000000000000000002541
139.0
View
LYD3_k127_801771_8
Belongs to the UPF0201 family
K09736
-
-
0.000000000000000000417
91.0
View
LYD3_k127_807065_0
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187
571.0
View
LYD3_k127_807065_1
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis
K04479
-
2.7.7.7
0.0000000000000000000000000000000000000000000000364
177.0
View
LYD3_k127_807065_2
Domain of unknown function (DUF296)
-
-
-
0.00000000000000000000000000000000000000000002927
166.0
View
LYD3_k127_807065_3
DNA polymerase alpha chain like domain
-
-
-
0.00000000000000000000000000000000000001329
152.0
View
LYD3_k127_807065_4
4-amino-4-deoxy-L-arabinose transferase activity
-
-
-
0.00000000003585
76.0
View
LYD3_k127_809313_0
TIGRFAM anaerobic ribonucleoside-triphosphate reductase
K21636
-
1.1.98.6
2.214e-311
968.0
View
LYD3_k127_809313_1
Superfamily I DNA and RNA helicases and helicase subunits
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284
412.0
View
LYD3_k127_809313_10
Bacterial regulatory helix-turn-helix protein, lysR family
K02019
-
-
0.0000000000000000000000000000002114
130.0
View
LYD3_k127_809313_11
PFAM Cupin
-
-
-
0.000000000000000000000000008184
113.0
View
LYD3_k127_809313_12
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03053
GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234
2.7.7.6
0.00000000000000000001104
99.0
View
LYD3_k127_809313_13
TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant
K01091
-
3.1.3.18
0.0000000000000000784
90.0
View
LYD3_k127_809313_2
ATPases associated with a variety of cellular activities
K06857
-
3.6.3.55
0.00000000000000000000000000000000000000000000000000000000000000000000000000005362
273.0
View
LYD3_k127_809313_3
Pyruvate ferredoxin oxidoreductase beta subunit C terminal
K00175
-
1.2.7.11,1.2.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000001241
246.0
View
LYD3_k127_809313_4
PBP superfamily domain
K05772
-
-
0.000000000000000000000000000000000000000000000000000000000000000000347
241.0
View
LYD3_k127_809313_5
Binding-protein-dependent transport system inner membrane component
K05773
-
-
0.000000000000000000000000000000000000000000000000000000000004426
215.0
View
LYD3_k127_809313_6
TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein
K04069
-
1.97.1.4
0.000000000000000000000000000000000000000000000000001585
190.0
View
LYD3_k127_809313_7
PFAM NADP oxidoreductase coenzyme F420-dependent
K06988
-
1.5.1.40
0.000000000000000000000000000000000000000000006401
169.0
View
LYD3_k127_809313_8
Alcohol dehydrogenase GroES domain protein
K00004
-
1.1.1.303,1.1.1.4
0.0000000000000000000000000000000000000000001815
171.0
View
LYD3_k127_809313_9
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
K07738
-
-
0.00000000000000000000000000000000000002441
149.0
View
LYD3_k127_821237_0
galactose-1-phosphate uridylyltransferase
K00965
-
2.7.7.12
0.000000000000000000000000000000000000000000000000000000000000000000000000001877
266.0
View
LYD3_k127_821237_1
HMGL-like
K01649
-
2.3.3.13
0.000000000000000000000000000000000000000000000000000000000000000000000003438
258.0
View
LYD3_k127_821237_2
Glycogen debranching enzyme N terminal
-
-
-
0.000000000000000000000000000000000000000000000000000000000003136
214.0
View
LYD3_k127_821237_3
4-amino-4-deoxy-L-arabinose transferase activity
-
-
-
0.0000000001369
74.0
View
LYD3_k127_821237_4
PFAM ABC transporter
K01990
-
-
0.000001164
51.0
View
LYD3_k127_85887_0
Bacterial transferase hexapeptide repeat
K04042
-
2.3.1.157,2.7.7.23
0.0000000000000000000000000000000000000000000000000000000000000000000001408
248.0
View
LYD3_k127_85887_1
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
K03431
-
5.4.2.10
0.0000000000000000000000000000000000000000000000000000000001066
211.0
View
LYD3_k127_861396_0
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475
617.0
View
LYD3_k127_861396_1
Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
K01823
-
5.3.3.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018
370.0
View
LYD3_k127_861396_10
chromosome segregation and condensation protein ScpA
K05896
-
-
0.000000000008233
74.0
View
LYD3_k127_861396_2
Required for chromosome condensation and partitioning
K03529
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007852
306.0
View
LYD3_k127_861396_3
Belongs to the FPP GGPP synthase family
K13787
-
2.5.1.1,2.5.1.10,2.5.1.29
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001963
290.0
View
LYD3_k127_861396_4
SMC proteins Flexible Hinge Domain
K03529
-
-
0.0000000000000000000000000000000000000000000000000155
194.0
View
LYD3_k127_861396_5
Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids
K06981
-
2.7.4.26
0.00000000000000000000000000000000000000000000007906
179.0
View
LYD3_k127_861396_6
Belongs to the UPF0107 family
K09128
-
-
0.00000000000000000000000000000000000004661
146.0
View
LYD3_k127_861396_7
Segregation and condensation complex subunit ScpB
K06024
-
-
0.000000000000000000000000000000005067
136.0
View
LYD3_k127_861396_8
PFAM ribosomal protein S8E
K02995
-
-
0.0000000000000000000000000008604
116.0
View
LYD3_k127_861396_9
Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP
K03105
-
-
0.000000000000199
74.0
View
LYD3_k127_864651_0
B12 binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087
336.0
View
LYD3_k127_864651_1
metal-dependent hydrolase with the TIM-barrel fold
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002045
293.0
View
LYD3_k127_864651_2
SMART Elongator protein 3 MiaB NifB
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002829
250.0
View
LYD3_k127_864651_3
Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
K02227
-
6.3.1.10
0.000000000000000000000000000000000000000000000000000006852
201.0
View
LYD3_k127_864651_4
SMART Elongator protein 3 MiaB NifB
-
-
-
0.0000000000000000000000000000000000000000000000003317
185.0
View
LYD3_k127_864651_5
-
-
-
-
0.000002317
55.0
View
LYD3_k127_880071_0
Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB)
K03124
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674
357.0
View
LYD3_k127_880071_1
Heterodisulfide reductase subunit B
K03389
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
0.000000000000000000000000000000000000000000000000000000000000000000000006431
253.0
View
LYD3_k127_880071_2
Catalyzes the reversible conversion of 5-aminoimidazole ribonucleotide (AIR) and CO(2) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
K01588
-
5.4.99.18
0.000000000000000000000000000000000000000000000000007439
185.0
View
LYD3_k127_880071_3
Nitrous oxide-stimulated promoter
-
-
-
0.000000000000000000000000000000000004447
140.0
View
LYD3_k127_880071_4
phosphatidate phosphatase activity
-
-
-
0.000000000000000000000000000000004021
140.0
View
LYD3_k127_880071_5
Belongs to the SUI1 family
K03113
-
-
0.00000000000000000000000000000005074
127.0
View
LYD3_k127_880071_6
phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
K01923
-
6.3.2.6
0.000000000000000000000000005088
112.0
View
LYD3_k127_880071_7
4Fe-4S dicluster domain
K03390
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
0.00000000000000000000000001003
116.0
View
LYD3_k127_880071_8
helix_turn_helix, Arsenical Resistance Operon Repressor
-
-
-
0.000000003884
65.0
View
LYD3_k127_888073_0
Phenylalanyl-tRNA synthetase beta subunit
K01890
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494
6.1.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087
459.0
View
LYD3_k127_888073_1
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily
K01889
GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627
335.0
View
LYD3_k127_888073_2
PFAM ABC-2 type transporter
K01992
-
-
0.000000000000000000001224
104.0
View
LYD3_k127_888073_3
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily
K01889
GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.20
0.00000000000004258
81.0
View
LYD3_k127_888073_4
Domain of unknown function (DUF4162)
K01990
-
-
0.00000006589
58.0
View
LYD3_k127_901822_0
membrane
-
-
-
0.00000000000000000000000000002718
133.0
View
LYD3_k127_90583_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
-
6.1.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126
352.0
View
LYD3_k127_90583_1
GyrI-like small molecule binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000008143
248.0
View
LYD3_k127_90583_2
Alkyl hydroperoxide reductase
K03564
-
1.11.1.15
0.0000000000000000000000000000000000000000000000000000000000001478
216.0
View
LYD3_k127_90583_3
Alpha/beta hydrolase family
-
-
-
0.00000000000000000000000000000000000000000000000000000165
198.0
View
LYD3_k127_90583_4
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
-
-
-
0.00000000000000000000000000000000000000000000000001795
185.0
View
LYD3_k127_90583_5
TIGRFAM phage SPO1 DNA polymerase-related protein
K21929
GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360
3.2.2.27
0.00000000000000000000000000000000000008605
147.0
View
LYD3_k127_908789_0
Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB)
K03124
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662
356.0
View
LYD3_k127_908789_1
Belongs to the SUI1 family
K03113
-
-
0.00000000000000000000000000000005825
128.0
View
LYD3_k127_913645_0
Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe)
K15449
-
4.1.3.44
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717
349.0
View
LYD3_k127_913645_1
Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA
K04801
GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360,GO:1901576
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074
315.0
View
LYD3_k127_913645_10
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03059
-
2.7.7.6
0.0000003572
56.0
View
LYD3_k127_913645_11
Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA
K04800
-
-
0.0000439
46.0
View
LYD3_k127_913645_12
-
-
-
-
0.0001026
48.0
View
LYD3_k127_913645_13
Met-10+ like-protein
K15429
-
2.1.1.228
0.0001073
46.0
View
LYD3_k127_913645_2
PFAM Oxidoreductase
K18855
-
1.1.1.374
0.0000000000000000000000000000000000000000000000000000000000000000000000003144
257.0
View
LYD3_k127_913645_3
Met-10+ like-protein
K15429
-
2.1.1.228
0.00000000000000000000000000000000000000000000000000000005506
202.0
View
LYD3_k127_913645_4
DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
K05982
-
3.1.21.7
0.00000000000000000000000000000000000000000000000003248
186.0
View
LYD3_k127_913645_5
UDP binding domain
K02474
-
-
0.000000000000000000000000000000000000001333
164.0
View
LYD3_k127_913645_6
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.10
0.000000000000000000000000000005575
122.0
View
LYD3_k127_913645_7
PFAM Translin
K07477
-
-
0.00000000000000000000000000001539
126.0
View
LYD3_k127_913645_8
PFAM Trm112p-like protein
-
-
-
0.00000000000000000000000003399
110.0
View
LYD3_k127_913645_9
phosphoglucomutase phosphomannomutase alpha beta alpha domain I
K15778
-
5.4.2.2,5.4.2.8
0.0000000000000887
73.0
View
LYD3_k127_955191_0
magnesium-translocating P-type ATPase
K01531
-
3.6.3.2
6.041e-250
804.0
View
LYD3_k127_955191_1
Pyridoxal-phosphate dependent enzyme
K01697,K01738
-
2.5.1.47,4.2.1.22
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667
364.0
View
LYD3_k127_955191_2
SMART zinc finger, CDGSH-type domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000003936
250.0
View
LYD3_k127_955191_3
Peptidase M16 inactive domain
-
-
-
0.00000000000000000000000000003124
126.0
View
LYD3_k127_955191_4
cell redox homeostasis
K09584
-
5.3.4.1
0.0000000001016
66.0
View
LYD3_k127_95890_0
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
K01872
GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.7
1.098e-261
835.0
View
LYD3_k127_95890_1
ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA
K06932
-
6.3.4.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189
344.0
View
LYD3_k127_95890_2
Lrp/AsnC ligand binding domain
-
-
-
0.00000000000000000000000005412
108.0
View
LYD3_k127_95890_3
Bacteriocin-protection, YdeI or OmpD-Associated
-
-
-
0.000000000000000000000277
101.0
View
LYD3_k127_95890_4
Lrp/AsnC ligand binding domain
-
-
-
0.0000000000000004873
79.0
View
LYD3_k127_95890_5
ABC transporter
K01990
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006855,GO:0008150,GO:0015562,GO:0015893,GO:0016020,GO:0022857,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944
-
0.0000000000001187
71.0
View
LYD3_k127_95890_6
COG1522 Transcriptional regulators
-
-
-
0.0000004763
53.0
View
LYD3_k127_990098_0
Radical SAM domain protein
K01012
-
2.8.1.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517
319.0
View
LYD3_k127_990098_1
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
0.00000000000000000000000000000000000000000000000000000000000000000000003047
258.0
View
LYD3_k127_99382_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01870
-
6.1.1.5
3.216e-292
926.0
View
LYD3_k127_99382_1
Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups
K00555
-
2.1.1.215,2.1.1.216
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867
310.0
View
LYD3_k127_99382_2
Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency
K06928
-
3.6.1.15
0.00000000000000000000000000000000000000005638
157.0
View
