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Overview

ID MAG02334
Name MMD1_bin.1
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Thermoanaerobaculia
Order UBA5066
Family Gp7-AA6
Genus JAWOLE01
Species
Assembly information
Completeness (%) 76.44
Contamination (%) 1.07
GC content (%) 68.0
N50 (bp) 4,346
Genome size (bp) 2,492,515

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2308

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1006145_0 Oligoendopeptidase f - - - 6.473e-246 793.0
MMD1_k127_1006145_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 614.0
MMD1_k127_1006806_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 299.0
MMD1_k127_1016979_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 402.0
MMD1_k127_1016979_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000008071 219.0
MMD1_k127_1022236_0 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 400.0
MMD1_k127_1022236_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006822 275.0
MMD1_k127_1022236_2 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000001025 174.0
MMD1_k127_1022236_3 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0000000000000004784 82.0
MMD1_k127_1028209_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 459.0
MMD1_k127_1028209_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 320.0
MMD1_k127_1033835_0 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003499 276.0
MMD1_k127_1033835_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000001346 222.0
MMD1_k127_1033835_2 Domain of Unknown Function (DUF1259) - - - 0.00006128 51.0
MMD1_k127_1035870_0 PFAM Thermolysin metallopeptidase, alpha-helical domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 440.0
MMD1_k127_1035870_1 agmatine deiminase activity K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 443.0
MMD1_k127_1035870_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 424.0
MMD1_k127_1035870_3 alanine racemase domain protein - - - 0.0000000000000000000000000000000000000000000003736 184.0
MMD1_k127_1035870_5 - - - - 0.00000001453 66.0
MMD1_k127_1039668_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 348.0
MMD1_k127_1039668_1 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 302.0
MMD1_k127_1039668_2 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 291.0
MMD1_k127_1039668_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004764 284.0
MMD1_k127_1039668_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000003438 171.0
MMD1_k127_1039668_5 PIN domain K18828 - - 0.000000000000000000000000000000000000000003576 158.0
MMD1_k127_1039668_6 - - - - 0.00003284 48.0
MMD1_k127_1039668_7 - - - - 0.0005876 47.0
MMD1_k127_104106_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 420.0
MMD1_k127_104106_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000006026 172.0
MMD1_k127_104106_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000001294 173.0
MMD1_k127_104106_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000119 112.0
MMD1_k127_104106_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000003849 93.0
MMD1_k127_106452_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 473.0
MMD1_k127_106452_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 358.0
MMD1_k127_1069531_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000006693 184.0
MMD1_k127_1069531_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000007481 121.0
MMD1_k127_1085134_0 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001127 288.0
MMD1_k127_1085134_1 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002713 286.0
MMD1_k127_1085134_2 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000001737 220.0
MMD1_k127_1085134_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000007279 83.0
MMD1_k127_1088277_0 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 313.0
MMD1_k127_1088277_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 321.0
MMD1_k127_1088277_2 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000003495 191.0
MMD1_k127_1097519_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 254.0
MMD1_k127_1097519_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009923 265.0
MMD1_k127_1097519_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000003366 129.0
MMD1_k127_1097519_4 PFAM Outer membrane efflux protein - - - 0.000000008492 68.0
MMD1_k127_1100539_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 457.0
MMD1_k127_1100539_1 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000000000000000000000001062 116.0
MMD1_k127_1100539_2 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000077 80.0
MMD1_k127_1100539_3 Belongs to the UPF0109 family K06960 GO:0008150,GO:0040007 - 0.000000006321 63.0
MMD1_k127_112536_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 452.0
MMD1_k127_112536_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 293.0
MMD1_k127_112536_2 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003391 70.0
MMD1_k127_1129923_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000001913 259.0
MMD1_k127_1129923_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000001613 245.0
MMD1_k127_1129923_2 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000000002035 143.0
MMD1_k127_1129923_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.00000000000000005414 89.0
MMD1_k127_113025_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 377.0
MMD1_k127_113025_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000002947 69.0
MMD1_k127_1144634_0 NHL repeat - - - 0.000000000000000000000000000000006064 147.0
MMD1_k127_1144634_1 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000931 137.0
MMD1_k127_1144634_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000002054 85.0
MMD1_k127_1149262_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 461.0
MMD1_k127_1149262_1 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000000000000000000003357 211.0
MMD1_k127_1149262_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000004905 147.0
MMD1_k127_1149262_3 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000709 155.0
MMD1_k127_1150797_0 Elongation factor G, domain IV K02355 - - 2.369e-223 711.0
MMD1_k127_1150797_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057,K02564 - 3.1.1.31,3.5.99.6 0.0000000000000000000000000000000000000000000000000000000000001406 218.0
MMD1_k127_115876_0 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 349.0
MMD1_k127_115876_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000007453 237.0
MMD1_k127_115876_2 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000001798 185.0
MMD1_k127_115876_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000001118 180.0
MMD1_k127_115876_4 prepilin-type N-terminal cleavage methylation K02456 - - 0.000000000000000000000000000003729 126.0
MMD1_k127_115876_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000003607 85.0
MMD1_k127_115876_6 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000001149 73.0
MMD1_k127_115876_7 general secretion pathway protein K02456,K02650 - - 0.000000000003524 75.0
MMD1_k127_1176188_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 396.0
MMD1_k127_1176188_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.00000000000000000000000001916 108.0
MMD1_k127_1181885_0 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 458.0
MMD1_k127_1181885_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000002351 180.0
MMD1_k127_1181885_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000005341 123.0
MMD1_k127_1181885_3 Transport permease protein K01992 - - 0.00000000000000002249 84.0
MMD1_k127_1182140_0 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000001078 122.0
MMD1_k127_1182140_1 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase - - - 0.00000000000000000000000001254 123.0
MMD1_k127_1194747_0 lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000001462 207.0
MMD1_k127_1194747_1 DEAD_2 K10844 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000001771 202.0
MMD1_k127_1194747_2 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000003378 143.0
MMD1_k127_120265_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 556.0
MMD1_k127_120265_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 317.0
MMD1_k127_120265_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000001744 152.0
MMD1_k127_120265_3 oxidoreductase activity - - - 0.000000000000000000000000000008156 138.0
MMD1_k127_120265_4 tetratricopeptide repeat - - - 0.0000501 55.0
MMD1_k127_1213494_0 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000001056 127.0
MMD1_k127_1213494_1 Glycosyl transferase family 2 K07011 - - 0.0000000000135 76.0
MMD1_k127_1213494_2 PFAM Glycosyl transferase, group 1 - - - 0.000000001029 70.0
MMD1_k127_122797_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 323.0
MMD1_k127_122797_1 ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 304.0
MMD1_k127_122797_2 PFAM ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000001191 205.0
MMD1_k127_1235968_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.277e-268 839.0
MMD1_k127_1235968_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000003224 168.0
MMD1_k127_1235968_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000003792 75.0
MMD1_k127_1240216_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002425 281.0
MMD1_k127_1240216_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000003501 244.0
MMD1_k127_1240216_2 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000002438 155.0
MMD1_k127_1245352_0 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000111 236.0
MMD1_k127_1245352_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000003713 199.0
MMD1_k127_1245352_2 Methyltransferase small domain - - - 0.000000000000000000000000000000000000009179 154.0
MMD1_k127_1245352_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000131 127.0
MMD1_k127_124861_0 GvpD gas vesicle protein K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 485.0
MMD1_k127_124861_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001699 274.0
MMD1_k127_1251690_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 330.0
MMD1_k127_1251690_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000007702 211.0
MMD1_k127_1251690_2 Sulfatase - - - 0.000000000000000000009171 97.0
MMD1_k127_1254599_0 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 308.0
MMD1_k127_1254599_1 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.0000000000000000000000000000000000001466 157.0
MMD1_k127_1254599_2 Oligoendopeptidase f - - - 0.00000003294 55.0
MMD1_k127_1255725_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 429.0
MMD1_k127_1255725_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002336 273.0
MMD1_k127_1255725_2 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000006059 136.0
MMD1_k127_1255725_3 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000001252 64.0
MMD1_k127_1268188_0 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 427.0
MMD1_k127_1268188_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 314.0
MMD1_k127_1268188_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000008246 143.0
MMD1_k127_1273821_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 313.0
MMD1_k127_1273821_1 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 298.0
MMD1_k127_1273821_2 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000003984 206.0
MMD1_k127_1273821_3 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000003875 183.0
MMD1_k127_1282755_0 OmpA family K02557,K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 398.0
MMD1_k127_1282755_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000008642 156.0
MMD1_k127_1282755_2 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000006827 152.0
MMD1_k127_1282755_3 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000401 121.0
MMD1_k127_1282755_4 Histidine kinase - - - 0.00000000000000000001599 100.0
MMD1_k127_1282755_6 Uncharacterized conserved protein (DUF2249) - - - 0.0004634 50.0
MMD1_k127_1304151_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 373.0
MMD1_k127_1304151_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 307.0
MMD1_k127_1304151_2 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 289.0
MMD1_k127_1304151_3 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.00000000000000000000000003717 114.0
MMD1_k127_1304151_4 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000001043 111.0
MMD1_k127_1304151_5 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000001112 98.0
MMD1_k127_1304151_6 Mannose-6-phosphate isomerase - - - 0.000000000000006234 85.0
MMD1_k127_1333085_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 346.0
MMD1_k127_1333085_1 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000001319 139.0
MMD1_k127_1333085_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000005354 92.0
MMD1_k127_1342649_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 9.455e-224 717.0
MMD1_k127_1342649_1 TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000007068 222.0
MMD1_k127_1342649_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000006022 210.0
MMD1_k127_1342649_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000001181 117.0
MMD1_k127_1342649_4 Zincin-like metallopeptidase - - - 0.000000000000000000000000003996 114.0
MMD1_k127_1342649_5 Ribosome-binding factor A K02834 - - 0.0000000000000000002291 92.0
MMD1_k127_1342649_6 Protein of unknown function (DUF503) K09764 - - 0.000000000000005973 79.0
MMD1_k127_1342649_7 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000003744 61.0
MMD1_k127_1343612_0 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 608.0
MMD1_k127_1343612_1 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000001128 153.0
MMD1_k127_1343612_2 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000001347 128.0
MMD1_k127_1343612_3 YjbR - - - 0.0000000000000000000000000000001869 136.0
MMD1_k127_135345_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 298.0
MMD1_k127_135345_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000001552 137.0
MMD1_k127_135345_2 periplasmic or secreted lipoprotein - - - 0.00000000000000000002852 96.0
MMD1_k127_1370444_0 Glycosyltransferase, group 2 family protein - - - 0.00000000000000000000000000000000000000006407 169.0
MMD1_k127_1370444_1 glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000002168 127.0
MMD1_k127_1370886_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 300.0
MMD1_k127_1370886_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 287.0
MMD1_k127_1370886_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000004094 205.0
MMD1_k127_1391557_0 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000001242 169.0
MMD1_k127_1391557_1 ATPase. Has a role at an early stage in the morphogenesis of the spore coat - - - 0.0000000000000000000000000000000000000000000385 175.0
MMD1_k127_1391557_2 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000002787 130.0
MMD1_k127_1422285_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 445.0
MMD1_k127_1422285_1 cheY-homologous receiver domain - - - 0.000000000002818 69.0
MMD1_k127_1422285_2 helix_turn_helix, Lux Regulon - - - 0.0000000008915 68.0
MMD1_k127_1431422_0 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 407.0
MMD1_k127_1431422_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K14189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 336.0
MMD1_k127_1431422_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 295.0
MMD1_k127_1431422_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002915 270.0
MMD1_k127_1431422_4 Glycine cleavage H-protein - - - 0.000000000000000000000000000001849 132.0
MMD1_k127_1431422_5 phosphorelay signal transduction system K02437 - - 0.000000000000000000000000000004838 128.0
MMD1_k127_1441236_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 316.0
MMD1_k127_1441236_1 - - - - 0.0000000000000000000000000000000000008049 158.0
MMD1_k127_1442662_0 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005098 342.0
MMD1_k127_1442662_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000004525 173.0
MMD1_k127_1442662_2 NHL repeat K08591 - 2.3.1.15 0.0000000000000000000000000000000000000003329 172.0
MMD1_k127_1449686_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.176e-222 695.0
MMD1_k127_1449686_1 helicase activity - - - 1.947e-202 644.0
MMD1_k127_1449686_2 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 448.0
MMD1_k127_1449686_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000002286 261.0
MMD1_k127_1449686_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000005717 91.0
MMD1_k127_1453659_0 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 297.0
MMD1_k127_1453659_2 - - - - 0.00000001594 59.0
MMD1_k127_1453659_3 Adenylate cyclase K01768 - 4.6.1.1 0.00000002521 68.0
MMD1_k127_1456812_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 548.0
MMD1_k127_1456812_1 glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 548.0
MMD1_k127_1456812_2 - - - - 0.000000000000000000000000000000006442 135.0
MMD1_k127_1457879_0 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 528.0
MMD1_k127_1457879_1 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 481.0
MMD1_k127_1457879_2 Smr domain - - - 0.0000000000000000000000001253 108.0
MMD1_k127_1457879_3 diguanylate cyclase - - - 0.00000000000000000005443 103.0
MMD1_k127_1457879_4 OsmC-like protein - - - 0.00000002349 64.0
MMD1_k127_1462335_0 ABC transporter C-terminal domain K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 417.0
MMD1_k127_1462335_1 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008771 309.0
MMD1_k127_1462335_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0002311 48.0
MMD1_k127_1464395_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.219e-205 658.0
MMD1_k127_1464395_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006201 284.0
MMD1_k127_1464395_2 cytokinin biosynthetic process K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000247 189.0
MMD1_k127_1464395_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000001872 181.0
MMD1_k127_1464395_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000001167 158.0
MMD1_k127_1464395_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000004853 146.0
MMD1_k127_1464395_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000001799 86.0
MMD1_k127_1464395_7 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000004154 76.0
MMD1_k127_1466294_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 331.0
MMD1_k127_1466294_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000008059 258.0
MMD1_k127_1466294_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000008511 226.0
MMD1_k127_1466294_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000000007798 136.0
MMD1_k127_1466294_4 YbbR-like protein - - - 0.000000000000000001685 96.0
MMD1_k127_1470290_0 Involved in the tonB-independent uptake of proteins - - - 3.708e-207 676.0
MMD1_k127_1470290_1 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 542.0
MMD1_k127_147200_0 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000797 278.0
MMD1_k127_147200_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000003374 146.0
MMD1_k127_147200_2 PFAM response regulator receiver - - - 0.000000000000000000000000000000002099 134.0
MMD1_k127_1478214_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007076 230.0
MMD1_k127_1478214_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000004142 195.0
MMD1_k127_1478214_2 - - - - 0.0000000000001761 82.0
MMD1_k127_1479613_0 Peptidase family M13 K07386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 549.0
MMD1_k127_1479613_1 transcriptional regulator, SARP family - - - 0.00004552 50.0
MMD1_k127_1484794_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 411.0
MMD1_k127_1486201_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 355.0
MMD1_k127_1486201_1 Cytochrome c K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 297.0
MMD1_k127_1486201_2 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000002401 184.0
MMD1_k127_1486201_3 PFAM cytochrome c class III - - - 0.0000000000000000000007901 111.0
MMD1_k127_1494725_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 616.0
MMD1_k127_1494725_1 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000001538 187.0
MMD1_k127_1494725_2 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.000000000000000000000000000000000003977 143.0
MMD1_k127_1494725_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000009457 127.0
MMD1_k127_1494725_4 - - - - 0.000000000000005121 85.0
MMD1_k127_1507370_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 366.0
MMD1_k127_1507370_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 312.0
MMD1_k127_1507370_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001198 282.0
MMD1_k127_1507370_3 - - - - 0.000000000000000000000000000000000000000000000003205 197.0
MMD1_k127_1507370_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000001324 160.0
MMD1_k127_1507370_5 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000008839 66.0
MMD1_k127_1507370_6 SMART Tetratricopeptide domain protein - - - 0.0001533 55.0
MMD1_k127_1509593_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 415.0
MMD1_k127_1509593_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 346.0
MMD1_k127_1509593_2 Aminoacyl tRNA synthetase class II, N-terminal domain K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001415 270.0
MMD1_k127_1509593_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000002948 101.0
MMD1_k127_1509593_4 Parallel beta-helix repeats - - - 0.0000002047 63.0
MMD1_k127_1509593_5 Collagen triple helix repeat (20 copies) - - - 0.00002201 54.0
MMD1_k127_1510056_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008121 252.0
MMD1_k127_1510056_1 pfam abc1 K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000003041 252.0
MMD1_k127_1510056_2 Cbs domain K04767 - - 0.000000000000000002652 89.0
MMD1_k127_1511458_0 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 389.0
MMD1_k127_1511458_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 296.0
MMD1_k127_1511496_0 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) K00917 - 2.7.1.144 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 314.0
MMD1_k127_1511496_1 PFAM CBS domain containing protein - - - 0.0000000000000004014 85.0
MMD1_k127_1511496_2 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000128 76.0
MMD1_k127_1511496_3 Universal stress protein - - - 0.000001013 52.0
MMD1_k127_1511496_4 Family of unknown function (DUF5335) - - - 0.000002759 55.0
MMD1_k127_1512987_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 4.094e-215 685.0
MMD1_k127_1512987_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 537.0
MMD1_k127_1512987_2 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 445.0
MMD1_k127_1512987_3 Phosphomethylpyrimidine kinase K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000004535 258.0
MMD1_k127_1512987_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000007049 189.0
MMD1_k127_1512987_5 lipopolysaccharide heptosyltransferase K02841,K02843 - - 0.0000000000000000000000000000000001424 146.0
MMD1_k127_1512987_6 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000004438 126.0
MMD1_k127_1512987_7 protein histidine kinase activity K02668 - 2.7.13.3 0.0000000000000000007656 95.0
MMD1_k127_1515181_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 484.0
MMD1_k127_1515181_1 Pfam:Methyltransf_26 - - - 0.00000000000000000000000000007636 121.0
MMD1_k127_1528362_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000003002 164.0
MMD1_k127_1528362_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000002431 61.0
MMD1_k127_1528362_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0006968 44.0
MMD1_k127_1529071_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008176 437.0
MMD1_k127_1529071_1 ribonuclease BN K07058 - - 0.000008741 49.0
MMD1_k127_1532670_0 acid phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 361.0
MMD1_k127_1532670_1 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000000000003925 142.0
MMD1_k127_1532670_2 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000004063 143.0
MMD1_k127_1532670_3 glycosylase K01246 - 3.2.2.20 0.0000000001515 61.0
MMD1_k127_15437_0 Dehydrogenase E1 component K11381 - 1.2.4.4 1.744e-270 846.0
MMD1_k127_15437_1 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000000000000000000000000000000000007173 149.0
MMD1_k127_1544005_0 Peptidase family M13 K07386 - - 6.497e-228 729.0
MMD1_k127_1544005_1 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008668 254.0
MMD1_k127_1544005_2 PFAM Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000006488 232.0
MMD1_k127_1547066_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000921 281.0
MMD1_k127_1547066_1 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.000000000000000000000000000000000000000000000000000000000005308 214.0
MMD1_k127_1547066_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000838 46.0
MMD1_k127_1548988_0 E1-E2 ATPase K01531 - 3.6.3.2 9.297e-250 793.0
MMD1_k127_1548988_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 300.0
MMD1_k127_1550995_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 377.0
MMD1_k127_1550995_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 310.0
MMD1_k127_1557491_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 322.0
MMD1_k127_1557491_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000001271 211.0
MMD1_k127_1557491_2 Zn peptidase - - - 0.0000000000000000000000000000003851 138.0
MMD1_k127_1560143_0 Phosphofructokinase K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 374.0
MMD1_k127_1560143_1 - - - - 0.000000000000000000000000000000000000000000000001918 177.0
MMD1_k127_1560143_2 PFAM Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000089 174.0
MMD1_k127_1560143_3 - - - - 0.000000000000000000000000005618 124.0
MMD1_k127_1560143_4 Haemolysin-III related K11068 - - 0.00006318 45.0
MMD1_k127_1563055_0 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 364.0
MMD1_k127_1563055_1 response regulator K13599 - - 0.0000000000000000000000000000000000000000000488 164.0
MMD1_k127_1564196_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 550.0
MMD1_k127_1564196_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 369.0
MMD1_k127_1564196_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 301.0
MMD1_k127_1564196_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 294.0
MMD1_k127_1564196_4 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000166 181.0
MMD1_k127_1569300_0 Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 352.0
MMD1_k127_1569300_1 PFAM Copper binding periplasmic protein CusF K07152 - - 0.000000000000000000000000000000000000000000000001341 185.0
MMD1_k127_1569300_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000057 150.0
MMD1_k127_1569300_3 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000000000000000005903 158.0
MMD1_k127_1569300_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00001016 52.0
MMD1_k127_1570631_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 466.0
MMD1_k127_1570631_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 297.0
MMD1_k127_1570631_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000001403 134.0
MMD1_k127_1570631_3 peptidyl-tyrosine sulfation - - - 0.0000000000147 73.0
MMD1_k127_1584049_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 351.0
MMD1_k127_1584049_1 region 4 type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001249 273.0
MMD1_k127_1584049_2 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000003686 119.0
MMD1_k127_1584049_3 - - - - 0.000000000000000000003628 102.0
MMD1_k127_159500_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 539.0
MMD1_k127_159500_1 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 344.0
MMD1_k127_159500_2 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000296 283.0
MMD1_k127_159500_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000003516 254.0
MMD1_k127_159500_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000007216 241.0
MMD1_k127_159500_5 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000004359 196.0
MMD1_k127_159500_6 Periplasmic binding protein K02016 - - 0.00000000000000000000000000001272 133.0
MMD1_k127_159500_8 - - - - 0.0003048 53.0
MMD1_k127_1595356_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 460.0
MMD1_k127_1595356_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000001936 158.0
MMD1_k127_1595356_2 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.00000000000000000000000001089 115.0
MMD1_k127_1596220_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000009523 217.0
MMD1_k127_1596220_1 Protein of unknown function (DUF3365) - - - 0.0000000000000000000000000000000000000001141 169.0
MMD1_k127_1596220_2 Domain of unknown function (DUF1858) - - - 0.0000000000000000000005493 104.0
MMD1_k127_1604909_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 460.0
MMD1_k127_1604909_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 410.0
MMD1_k127_1604909_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067,K01790,K19997 - 1.1.1.133,5.1.3.13,5.1.3.26 0.0000000000000000000000000000000000000000000000000000000000000132 231.0
MMD1_k127_1604909_3 Phosphoserine phosphatase - - - 0.0000008503 60.0
MMD1_k127_1618162_0 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000531 240.0
MMD1_k127_1618162_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000003336 119.0
MMD1_k127_1618162_2 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000007664 110.0
MMD1_k127_1621855_0 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008971 370.0
MMD1_k127_1621855_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006036 276.0
MMD1_k127_1621855_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000001843 158.0
MMD1_k127_1621855_3 Cytochrome c K03611 - - 0.0000000000000000000000000004534 123.0
MMD1_k127_1621855_4 PspC domain protein K03973 - - 0.000000000000001358 85.0
MMD1_k127_163032_0 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 532.0
MMD1_k127_163032_1 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 463.0
MMD1_k127_163032_2 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 432.0
MMD1_k127_163394_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 421.0
MMD1_k127_163394_1 Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 395.0
MMD1_k127_163394_2 PFAM Glycosyl transferase family 2 K14597 - - 0.0000000000000000000000000000000000000000000000001218 193.0
MMD1_k127_163394_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000005503 115.0
MMD1_k127_163394_4 iron-sulfur cluster assembly K07400 - - 0.00000000000000000000131 102.0
MMD1_k127_1646459_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 609.0
MMD1_k127_1646459_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 291.0
MMD1_k127_1646459_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000002472 140.0
MMD1_k127_1646459_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000217 139.0
MMD1_k127_1646459_12 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000006847 116.0
MMD1_k127_1646459_13 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000006546 95.0
MMD1_k127_1646459_14 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000079 89.0
MMD1_k127_1646459_15 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000002347 76.0
MMD1_k127_1646459_16 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000001149 70.0
MMD1_k127_1646459_17 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000004013 57.0
MMD1_k127_1646459_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006302 272.0
MMD1_k127_1646459_3 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000964 214.0
MMD1_k127_1646459_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000006626 215.0
MMD1_k127_1646459_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000004924 204.0
MMD1_k127_1646459_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000003405 203.0
MMD1_k127_1646459_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000001989 175.0
MMD1_k127_1646459_8 rRNA binding K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000004645 165.0
MMD1_k127_1646459_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000003909 155.0
MMD1_k127_1657531_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 381.0
MMD1_k127_1657531_1 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 374.0
MMD1_k127_166032_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 428.0
MMD1_k127_166032_1 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 406.0
MMD1_k127_166032_2 GTP-binding protein K06207 - - 0.00000000000000000000000000000000000000000000000000000007785 203.0
MMD1_k127_1661323_0 Sortilin, neurotensin receptor 3, - - - 1.859e-217 695.0
MMD1_k127_1662792_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 421.0
MMD1_k127_1662792_1 - - - - 0.00004694 49.0
MMD1_k127_166506_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000002705 138.0
MMD1_k127_166506_1 TonB-dependent Receptor Plug K16092 - - 0.0000000000000000002912 99.0
MMD1_k127_1670825_0 Cardiolipin synthetase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 369.0
MMD1_k127_1670825_1 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000005187 100.0
MMD1_k127_1670825_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000001564 65.0
MMD1_k127_1699131_2 methyltransferase - - - 0.0000000000002211 79.0
MMD1_k127_1699131_3 PIN domain K07064 - - 0.00008055 52.0
MMD1_k127_1699131_4 Radical SAM K22227 - - 0.0004181 48.0
MMD1_k127_1708230_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000006456 228.0
MMD1_k127_1708230_1 S4 RNA-binding domain K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000005153 181.0
MMD1_k127_1708230_2 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.00000000000000000000000000000002378 139.0
MMD1_k127_1708230_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000009287 98.0
MMD1_k127_1709040_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 9.148e-215 696.0
MMD1_k127_1709040_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000006633 265.0
MMD1_k127_1709040_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000001419 211.0
MMD1_k127_1709040_3 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000003066 192.0
MMD1_k127_1709040_4 cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000099 165.0
MMD1_k127_1709858_0 Peptidase dimerisation domain K12941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 370.0
MMD1_k127_1709858_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 309.0
MMD1_k127_1709858_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000001042 222.0
MMD1_k127_1709858_3 Participates in both transcription termination and antitermination K02600 - - 0.00002436 52.0
MMD1_k127_171284_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 367.0
MMD1_k127_171284_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 346.0
MMD1_k127_171284_2 CoA binding domain K06929 - - 0.00000000000000000000000000000001618 139.0
MMD1_k127_171284_3 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000002268 100.0
MMD1_k127_171284_4 TonB C terminal - - - 0.0000000001009 74.0
MMD1_k127_171284_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.000000009127 66.0
MMD1_k127_1721947_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 390.0
MMD1_k127_1721947_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 309.0
MMD1_k127_1721947_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000001196 166.0
MMD1_k127_1721947_3 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000001197 134.0
MMD1_k127_1723992_0 proline dehydrogenase activity K00318 - - 0.000000000000000000000000000000000000000003864 162.0
MMD1_k127_1723992_1 Phosphoribosyl transferase domain - GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000022 104.0
MMD1_k127_172687_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 518.0
MMD1_k127_172687_1 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000000000000000000003957 197.0
MMD1_k127_172687_2 DREV methyltransferase - - - 0.000000000000000000000000000000000000000008562 170.0
MMD1_k127_1727216_0 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 2.789e-201 662.0
MMD1_k127_1727216_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 435.0
MMD1_k127_1727216_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000219 223.0
MMD1_k127_1732765_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 2.29e-231 744.0
MMD1_k127_1732765_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000001262 90.0
MMD1_k127_1732890_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388,K12527 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6,1.97.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 594.0
MMD1_k127_1732890_1 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002037 286.0
MMD1_k127_1732890_2 Polysaccharide lyase family 4, domain II - - - 0.000000000000000000000000000000000000000000002433 175.0
MMD1_k127_1732890_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000008273 115.0
MMD1_k127_1732890_4 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000004915 117.0
MMD1_k127_173921_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 348.0
MMD1_k127_173921_1 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 306.0
MMD1_k127_173921_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000006363 137.0
MMD1_k127_173921_3 AI-2E family transporter - - - 0.0000000000000000000000000000000008639 151.0
MMD1_k127_173921_4 chlorophyll binding - - - 0.0000000000000002844 92.0
MMD1_k127_173921_5 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000003484 81.0
MMD1_k127_173964_0 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 411.0
MMD1_k127_173964_1 - - - - 0.00000000000000000000000000000000000000000003254 170.0
MMD1_k127_173964_2 Beta-lactamase - - - 0.0000000000000004381 83.0
MMD1_k127_1751593_0 Prolyl oligopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 554.0
MMD1_k127_1751593_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000003109 228.0
MMD1_k127_1751593_2 Toxic component of a toxin-antitoxin (TA) module K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.0000000000000000000000000000001213 128.0
MMD1_k127_1751593_3 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000002149 125.0
MMD1_k127_1751593_4 cellulase activity - - - 0.00000002703 66.0
MMD1_k127_1763104_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 486.0
MMD1_k127_1763104_1 Tyrosine recombinase xerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006771 301.0
MMD1_k127_1763104_2 PFAM Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000000000009929 139.0
MMD1_k127_1763104_3 Putative cyclase - - - 0.0000000000000000000000000002939 115.0
MMD1_k127_1763104_4 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000004887 113.0
MMD1_k127_1768490_0 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 419.0
MMD1_k127_1768490_1 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.00000000000000000000000000000000000000000000000000000000000000025 231.0
MMD1_k127_1768490_2 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000009907 120.0
MMD1_k127_1769550_0 Voltage gated chloride channel - - - 4.003e-221 701.0
MMD1_k127_1769550_1 Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 619.0
MMD1_k127_1769550_2 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 383.0
MMD1_k127_1769550_3 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 395.0
MMD1_k127_1769550_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 286.0
MMD1_k127_1769550_5 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000007082 130.0
MMD1_k127_1769550_6 - - - - 0.0000000003156 66.0
MMD1_k127_1769550_7 Phospholipase_D-nuclease N-terminal - - - 0.000000005052 59.0
MMD1_k127_1795536_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 359.0
MMD1_k127_1795536_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000005248 63.0
MMD1_k127_179800_0 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000001573 208.0
MMD1_k127_179800_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000008521 180.0
MMD1_k127_1807044_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.518e-241 760.0
MMD1_k127_1807044_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 474.0
MMD1_k127_1807044_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002869 281.0
MMD1_k127_1807044_4 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.0000001196 57.0
MMD1_k127_1808090_0 OPT oligopeptide transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 398.0
MMD1_k127_1808090_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 384.0
MMD1_k127_1808090_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002288 295.0
MMD1_k127_1808090_3 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001892 258.0
MMD1_k127_1810864_0 Ring hydroxylating alpha subunit (catalytic domain) K00479,K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 399.0
MMD1_k127_1810864_1 OPT oligopeptide transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 357.0
MMD1_k127_1810864_2 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001557 262.0
MMD1_k127_1810864_3 - - - - 0.0000000000000000000000000000004806 126.0
MMD1_k127_181703_0 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 587.0
MMD1_k127_181703_1 Peptidase, M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 496.0
MMD1_k127_181703_2 Phosphoesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 308.0
MMD1_k127_182155_1 Bacterial membrane protein YfhO - - - 0.000000002355 63.0
MMD1_k127_1825186_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 593.0
MMD1_k127_1825186_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000001371 232.0
MMD1_k127_1825186_2 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000035 173.0
MMD1_k127_1825186_3 aminotransferase class I and II - - - 0.000000000000000000000005495 108.0
MMD1_k127_1825186_4 - - - - 0.00000000004194 77.0
MMD1_k127_1837839_0 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 313.0
MMD1_k127_1837839_1 - - - - 0.000000000000000000000000000000002089 138.0
MMD1_k127_1837839_2 Histidine kinase-like ATPases - - - 0.0000000000000001272 81.0
MMD1_k127_1837839_3 thiamine biosynthesis protein ThiS K03154 - - 0.000000000003537 77.0
MMD1_k127_184092_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 468.0
MMD1_k127_184092_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000007114 264.0
MMD1_k127_1854406_0 Response regulator, receiver K01007 - 2.7.9.2 7.085e-218 695.0
MMD1_k127_1854406_1 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000005515 233.0
MMD1_k127_1854406_2 - - - - 0.000000002213 61.0
MMD1_k127_1873600_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 2106.0
MMD1_k127_1877446_0 PFAM tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA helicase-type K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 566.0
MMD1_k127_1877446_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 428.0
MMD1_k127_1877446_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000001822 169.0
MMD1_k127_1877446_3 toxin-antitoxin pair type II binding - - - 0.0000001331 55.0
MMD1_k127_188450_0 Extracellular solute-binding protein K02027 - - 1.798e-226 710.0
MMD1_k127_188450_1 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 458.0
MMD1_k127_188450_2 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 440.0
MMD1_k127_188450_3 Binding-protein-dependent transport system inner membrane component K02025,K10118,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 434.0
MMD1_k127_188450_4 phosphate-selective porin O and P - - - 0.000000000000000000000000000000004209 145.0
MMD1_k127_188450_5 PFAM EAL domain - - - 0.000000000000000000000000003636 125.0
MMD1_k127_188450_6 - - - - 0.00000000000001579 78.0
MMD1_k127_188450_7 S4 RNA-binding domain K04762 - - 0.00000000000002905 78.0
MMD1_k127_188450_8 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.00000000015 67.0
MMD1_k127_1901969_0 Flotillin K07192 - - 2.251e-217 683.0
MMD1_k127_1901969_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 416.0
MMD1_k127_1901969_2 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006087 260.0
MMD1_k127_1901969_3 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000001297 219.0
MMD1_k127_1901969_4 Membrane protein implicated in regulation of membrane protease activity - - - 0.00000000000000000000000000000000000000000000000000003747 202.0
MMD1_k127_192420_0 Belongs to the Dps family K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000001758 209.0
MMD1_k127_192420_1 Peptidase, S41 - - - 0.00000000000000000000000000000000000000000000000000000893 209.0
MMD1_k127_192420_2 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000002029 173.0
MMD1_k127_192420_3 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000003999 114.0
MMD1_k127_192420_4 regulator of chromosome condensation, RCC1 - - - 0.0000000002149 65.0
MMD1_k127_192420_5 exo-alpha-(2->6)-sialidase activity K20276 - - 0.0004021 47.0
MMD1_k127_1928874_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000792 209.0
MMD1_k127_1928874_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K12132 - 2.7.11.1 0.000000000000000000009395 98.0
MMD1_k127_1932476_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.127e-196 621.0
MMD1_k127_1932476_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000005806 248.0
MMD1_k127_1932476_2 Riboflavin synthase alpha chain K00793 - 2.5.1.9 0.000000000000000000000002387 105.0
MMD1_k127_1932476_3 Domain of unknown function (DUF4412) - - - 0.00000000003097 72.0
MMD1_k127_1934456_0 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 402.0
MMD1_k127_1934456_1 Protein of unknown function (DUF1573) - - - 0.00002519 56.0
MMD1_k127_1943574_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 404.0
MMD1_k127_1943574_1 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 359.0
MMD1_k127_1943574_2 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 293.0
MMD1_k127_1943574_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000006903 249.0
MMD1_k127_1943574_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000006213 95.0
MMD1_k127_1950711_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000007175 255.0
MMD1_k127_1950711_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002691 257.0
MMD1_k127_1950711_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000001139 155.0
MMD1_k127_1959495_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 503.0
MMD1_k127_1959495_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 417.0
MMD1_k127_1959495_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000007937 54.0
MMD1_k127_1959495_3 regulatory protein RecX K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00002139 55.0
MMD1_k127_1968836_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02022,K16922,K20345 - - 0.0000000000000000000000000000000000000000000000000000651 208.0
MMD1_k127_1968836_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.00000000000000000000000000000000000000000000000009059 202.0
MMD1_k127_1969116_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 3.021e-252 793.0
MMD1_k127_1969116_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 3.579e-217 684.0
MMD1_k127_197126_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 411.0
MMD1_k127_197126_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 373.0
MMD1_k127_197126_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000001394 170.0
MMD1_k127_197126_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000005251 89.0
MMD1_k127_1989416_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000008888 87.0
MMD1_k127_198957_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000006421 103.0
MMD1_k127_198957_1 DSBA-like thioredoxin domain - - - 0.0000000000000001842 91.0
MMD1_k127_200074_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 461.0
MMD1_k127_200074_1 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 452.0
MMD1_k127_200074_2 LAO AO transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 327.0
MMD1_k127_200074_3 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000004401 206.0
MMD1_k127_200074_4 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000001293 213.0
MMD1_k127_200074_5 Glyoxalase-like domain K05606 - 5.1.99.1 0.00000000000000000000000000000000000001503 161.0
MMD1_k127_200074_6 - - - - 0.0000000000000000000000002029 121.0
MMD1_k127_200074_7 - - - - 0.000000000000000203 82.0
MMD1_k127_2005104_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1033.0
MMD1_k127_2009859_0 Involved in the biosynthesis of porphyrin-containing compound K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 456.0
MMD1_k127_2009859_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000007278 165.0
MMD1_k127_2009859_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000005932 118.0
MMD1_k127_2018428_0 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 394.0
MMD1_k127_2018428_1 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 371.0
MMD1_k127_2018428_2 transferase activity, transferring acyl groups - - - 0.0000000000000000000004606 97.0
MMD1_k127_2037782_0 PFAM Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 599.0
MMD1_k127_2037782_1 Belongs to the FPG family K05522,K10563 GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0003906,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008534,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0090304,GO:0097159,GO:0097506,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000001119 225.0
MMD1_k127_2037782_2 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000000004579 136.0
MMD1_k127_2041573_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001284 241.0
MMD1_k127_2041573_1 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007544 237.0
MMD1_k127_2041573_2 Belongs to the ompA family K03640 - - 0.0000000000000000003866 87.0
MMD1_k127_2043101_0 Bacterial membrane protein, YfhO - - - 0.00000000000000000000001666 117.0
MMD1_k127_2043101_1 Bacterial membrane protein YfhO - - - 0.00000000008807 74.0
MMD1_k127_2047346_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 311.0
MMD1_k127_2047346_1 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000005774 118.0
MMD1_k127_2048714_0 protein secretion by the type I secretion system K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002931 281.0
MMD1_k127_2048714_1 methyltransferase - - - 0.00000000000000000000002128 104.0
MMD1_k127_2048714_2 Helix-turn-helix domain - - - 0.000000000000000000000192 105.0
MMD1_k127_205132_0 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000000005143 191.0
MMD1_k127_205132_1 Belongs to the bacterial solute-binding protein 9 family K09818 - - 0.000000000000000000000000001389 122.0
MMD1_k127_205132_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000008503 87.0
MMD1_k127_205132_3 Archease protein family (MTH1598/TM1083) - - - 0.00000000005378 67.0
MMD1_k127_2052496_0 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000001258 195.0
MMD1_k127_2052496_1 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000004803 122.0
MMD1_k127_2052496_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000002494 91.0
MMD1_k127_2063027_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 7.065e-202 648.0
MMD1_k127_2063027_1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001957 279.0
MMD1_k127_2063027_2 PFAM iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000008052 187.0
MMD1_k127_2073654_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 318.0
MMD1_k127_2073654_1 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000003542 230.0
MMD1_k127_2073654_2 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000718 211.0
MMD1_k127_2073654_3 Domain of unknown function (DUF3488) - - - 0.000000000000000000000000002216 130.0
MMD1_k127_2073654_4 Protein of unknown function DUF58 - - - 0.000000000000000000000002221 115.0
MMD1_k127_2073654_5 PFAM Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000000000000007851 94.0
MMD1_k127_2097222_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007136 281.0
MMD1_k127_2097222_1 ATPases associated with a variety of cellular activities K01990,K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000001777 267.0
MMD1_k127_2097222_2 PFAM ABC-2 type transporter K01992,K09690 - - 0.00000000000000000000000000000000000000000000001795 181.0
MMD1_k127_2097222_3 Glycosyl transferase, family 2 K01854,K07011 - 5.4.99.9 0.000000000000000000003162 98.0
MMD1_k127_2104761_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 554.0
MMD1_k127_2104761_1 Mechanosensitive ion channel - - - 0.00000000000000000000000001285 118.0
MMD1_k127_2104761_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000005398 99.0
MMD1_k127_2104840_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000005156 210.0
MMD1_k127_2104840_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000001219 130.0
MMD1_k127_2104840_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.0000000000000000000396 92.0
MMD1_k127_2110415_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000006493 242.0
MMD1_k127_2116479_0 nitrite reductase [NAD(P)H] activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002435 278.0
MMD1_k127_2116479_1 methyltransferase - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000007224 119.0
MMD1_k127_213738_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000003765 177.0
MMD1_k127_213738_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000007057 147.0
MMD1_k127_213738_2 Molybdopterin converting factor, large subunit K03635 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 0.0000000000000000000000000103 113.0
MMD1_k127_213738_3 Mo-molybdopterin cofactor metabolic process K03636,K03637,K03752,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77,2.8.1.12,4.6.1.17 0.0000000000001392 78.0
MMD1_k127_213738_4 Bacterial membrane protein YfhO - - - 0.0000006562 60.0
MMD1_k127_214970_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 362.0
MMD1_k127_214970_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000002309 118.0
MMD1_k127_214970_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000008307 79.0
MMD1_k127_2165279_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 539.0
MMD1_k127_2165279_1 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000003055 72.0
MMD1_k127_2172823_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000001316 210.0
MMD1_k127_2172823_1 Tetratricopeptide repeat - - - 0.0000000000000001409 94.0
MMD1_k127_2172823_2 Polysaccharide deacetylase - - - 0.000000000000001083 85.0
MMD1_k127_2172823_3 polysaccharide biosynthetic process - - - 0.0000004437 60.0
MMD1_k127_2182160_0 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008507 266.0
MMD1_k127_2182160_1 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000007952 216.0
MMD1_k127_2182160_2 TIGRFAM exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000388 224.0
MMD1_k127_2187433_0 PFAM Amidase - - - 1.433e-274 855.0
MMD1_k127_2187433_1 Carboxypeptidase regulatory-like domain - - - 6.622e-209 686.0
MMD1_k127_2190782_0 PFAM S23 ribosomal protein - - - 0.00000000000000000000000000000000000000002444 159.0
MMD1_k127_2190782_1 peptide catabolic process - - - 0.000000000747 64.0
MMD1_k127_2190782_2 - - - - 0.0000008541 61.0
MMD1_k127_2193258_0 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000004241 131.0
MMD1_k127_2193258_1 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000004183 124.0
MMD1_k127_2201501_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 1.069e-212 688.0
MMD1_k127_2201501_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000001114 151.0
MMD1_k127_2203300_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 364.0
MMD1_k127_2203300_1 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 349.0
MMD1_k127_2203300_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003046 277.0
MMD1_k127_2203300_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000008128 191.0
MMD1_k127_2203300_4 PemK-like, MazF-like toxin of type II toxin-antitoxin system - - - 0.00000000000000000000000002162 111.0
MMD1_k127_2203300_5 Glycosyltransferase family 92 - - - 0.00000001708 60.0
MMD1_k127_2203300_6 thiolester hydrolase activity - - - 0.00000003771 58.0
MMD1_k127_2203300_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0001625 53.0
MMD1_k127_2210854_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000132 255.0
MMD1_k127_2210854_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000000000000000000000000000000000000625 231.0
MMD1_k127_2210854_2 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000002845 202.0
MMD1_k127_2210854_3 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000001881 116.0
MMD1_k127_2210854_4 TonB C terminal K03646,K03832 - - 0.00000000000000001435 89.0
MMD1_k127_2216547_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00244,K00278 GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.3.5.4,1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 541.0
MMD1_k127_2216547_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 298.0
MMD1_k127_2216547_2 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006824 275.0
MMD1_k127_2217239_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 341.0
MMD1_k127_2217239_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000002688 100.0
MMD1_k127_2224099_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 391.0
MMD1_k127_2224099_1 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 313.0
MMD1_k127_2224099_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000006468 215.0
MMD1_k127_2233512_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.22e-244 766.0
MMD1_k127_2233512_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 304.0
MMD1_k127_22419_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 312.0
MMD1_k127_22419_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000008114 141.0
MMD1_k127_22419_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000007321 128.0
MMD1_k127_22419_3 Thioesterase-like superfamily K07107 - - 0.000000000000003285 89.0
MMD1_k127_2247316_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000009911 160.0
MMD1_k127_2247985_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 549.0
MMD1_k127_2247985_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 361.0
MMD1_k127_2247985_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002423 256.0
MMD1_k127_2248632_0 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000007967 210.0
MMD1_k127_2248632_1 AMP binding K06149 - - 0.0000000000000000000015 104.0
MMD1_k127_2248632_2 Universal stress protein A-like protein - GO:0000166,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016208,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00003713 54.0
MMD1_k127_2267362_0 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 327.0
MMD1_k127_2278629_0 Peptidase M56 - - - 0.000000000000008914 82.0
MMD1_k127_2278629_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000001127 77.0
MMD1_k127_2278629_2 DSBA oxidoreductase - - - 0.00001078 57.0
MMD1_k127_2279931_0 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 453.0
MMD1_k127_2279931_1 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 378.0
MMD1_k127_2279931_2 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000152 256.0
MMD1_k127_2279931_3 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000004468 207.0
MMD1_k127_2281283_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 548.0
MMD1_k127_2281283_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001538 244.0
MMD1_k127_2281283_2 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000005135 164.0
MMD1_k127_2281283_3 pfam nudix - - - 0.000000000000000000000000000000002512 135.0
MMD1_k127_2288082_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003799 255.0
MMD1_k127_2288082_1 KR domain K07535 - - 0.00000000000000000000000000000000000000000000007222 187.0
MMD1_k127_2288082_2 PFAM Haloacid dehalogenase domain protein hydrolase - - - 0.0000000000000000000000000000000000000000000005663 174.0
MMD1_k127_2288082_3 - - - - 0.0000000000000000000000000000000000001565 151.0
MMD1_k127_2288082_4 Putative esterase K07214 - - 0.0000000000000000000000000000007559 139.0
MMD1_k127_2288082_5 Membrane domain of glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000005895 118.0
MMD1_k127_2288082_6 Transglutaminase-like superfamily - - - 0.0000000000000000000000001451 113.0
MMD1_k127_2288082_7 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000002687 104.0
MMD1_k127_2288082_8 - - - - 0.00000000489 63.0
MMD1_k127_2295449_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 575.0
MMD1_k127_2295449_1 BadF/BadG/BcrA/BcrD ATPase family K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 473.0
MMD1_k127_2295449_2 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 306.0
MMD1_k127_2295449_3 benzoyl-CoA reductase K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000001104 246.0
MMD1_k127_2295449_4 - - - - 0.000000000000000000000000000000000000000000000000000000000598 213.0
MMD1_k127_2295449_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000002216 116.0
MMD1_k127_2313763_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005879 309.0
MMD1_k127_2313763_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000057 261.0
MMD1_k127_2328307_0 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 496.0
MMD1_k127_2328307_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 439.0
MMD1_k127_2328307_2 WYL domain K13572 - - 0.000000000000000000000000000000000000009922 159.0
MMD1_k127_2328307_3 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.000001989 50.0
MMD1_k127_2328307_4 Tetratricopeptide repeat - - - 0.000002431 59.0
MMD1_k127_2330738_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 490.0
MMD1_k127_2330738_1 PFAM Cytochrome b b6 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 381.0
MMD1_k127_2330738_2 Cytochrome b(C-terminal)/b6/petD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 375.0
MMD1_k127_2330738_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 305.0
MMD1_k127_2330738_4 Protein of unknown function (DUF2400) - - - 0.000000000000000000000000000000000000000000000000000000000000003728 228.0
MMD1_k127_2330738_5 Thioredoxin-like - - - 0.0000000000000000000005099 110.0
MMD1_k127_2336772_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 391.0
MMD1_k127_2336772_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 340.0
MMD1_k127_2336772_10 Acid phosphatase homologues - - - 0.00000000000000000000000002715 122.0
MMD1_k127_2336772_11 transcriptional regulator - - - 0.00000000001806 72.0
MMD1_k127_2336772_2 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 345.0
MMD1_k127_2336772_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008212 295.0
MMD1_k127_2336772_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004203 250.0
MMD1_k127_2336772_5 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000000004332 209.0
MMD1_k127_2336772_6 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000002672 198.0
MMD1_k127_2336772_7 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000004875 176.0
MMD1_k127_2336772_8 DNA polymerase alpha chain like domain K02347 - - 0.00000000000000000000000000000000000008726 144.0
MMD1_k127_2336772_9 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000000000000000000000000001302 139.0
MMD1_k127_2348612_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 533.0
MMD1_k127_2348612_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001929 281.0
MMD1_k127_2348612_2 - K01992,K19341 - - 0.0000000000000000000000000000006689 136.0
MMD1_k127_2348612_3 - - - - 0.0006901 52.0
MMD1_k127_2362214_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 2.527e-222 701.0
MMD1_k127_2362214_1 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 335.0
MMD1_k127_2362214_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000002179 151.0
MMD1_k127_2371556_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 342.0
MMD1_k127_2371556_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 349.0
MMD1_k127_2371556_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000007572 173.0
MMD1_k127_2371556_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000006132 161.0
MMD1_k127_2371556_4 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000001503 104.0
MMD1_k127_239753_0 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 294.0
MMD1_k127_239753_1 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000346 271.0
MMD1_k127_239753_2 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000000224 195.0
MMD1_k127_239753_3 Universal stress protein family - - - 0.000000000000000000000000000002684 129.0
MMD1_k127_239753_4 PFAM CBS domain containing protein K07168 - - 0.00000000000000000000000004114 119.0
MMD1_k127_239753_5 Putative phosphatase (DUF442) - - - 0.0000000000000001162 90.0
MMD1_k127_2414170_0 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 335.0
MMD1_k127_2414170_1 Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0008150,GO:0019842,GO:0030170,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000009215 237.0
MMD1_k127_2414170_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000008382 216.0
MMD1_k127_242615_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 514.0
MMD1_k127_242615_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000002977 202.0
MMD1_k127_242615_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000002034 193.0
MMD1_k127_242615_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000004827 164.0
MMD1_k127_242615_4 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000008235 122.0
MMD1_k127_242615_5 transglutaminase - - - 0.000000000001212 79.0
MMD1_k127_2427333_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 393.0
MMD1_k127_2427333_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000977 334.0
MMD1_k127_2427333_2 Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress K01091 - 3.1.3.18 0.00000000000000000000000001698 117.0
MMD1_k127_2427333_3 molybdopterin-guanine dinucleotide biosynthesis protein K03753 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000004317 61.0
MMD1_k127_2427333_4 PFAM GCN5-related N-acetyltransferase - - - 0.0004181 48.0
MMD1_k127_2430127_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 595.0
MMD1_k127_2430127_1 Dihydroxyacetone kinase family K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 429.0
MMD1_k127_2430127_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000007383 216.0
MMD1_k127_2430127_3 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000000000000000000000000000000000000119 211.0
MMD1_k127_2430127_4 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000242 209.0
MMD1_k127_2430127_5 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000079 191.0
MMD1_k127_2430127_6 G-D-S-L family lipolytic protein - - - 0.000000000000003018 89.0
MMD1_k127_2430127_7 - - - - 0.00000000005745 66.0
MMD1_k127_2432142_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 597.0
MMD1_k127_2432142_1 Domain of unknown function (DUF4388) - - - 0.0001701 54.0
MMD1_k127_2437877_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000003839 229.0
MMD1_k127_2437877_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000002603 98.0
MMD1_k127_2440867_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001844 254.0
MMD1_k127_2440867_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000001937 227.0
MMD1_k127_2440867_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000001439 191.0
MMD1_k127_2440867_3 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000001298 142.0
MMD1_k127_2440867_4 phosphotransferase related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.00000000000000000000000007865 120.0
MMD1_k127_2440867_5 Tetratricopeptide repeat K05807 - - 0.0000000000000000000003508 111.0
MMD1_k127_2440867_6 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000000000003956 78.0
MMD1_k127_2440867_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116 - - 0.00000000002542 65.0
MMD1_k127_2440867_8 PFAM helix-turn-helix, Fis-type - - - 0.000006504 51.0
MMD1_k127_2440867_9 LysM domain - - - 0.0004148 51.0
MMD1_k127_244234_0 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 339.0
MMD1_k127_244234_1 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000002203 215.0
MMD1_k127_244234_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.0000000000000000000000000000000000000001616 163.0
MMD1_k127_244234_3 endo-1,4-beta-xylanase activity - - - 0.000000000000000000000000017 122.0
MMD1_k127_244234_4 TonB dependent receptor - - - 0.0000000000000003712 81.0
MMD1_k127_2451564_0 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000002031 192.0
MMD1_k127_2451564_1 acr, cog1430 K09005 - - 0.000000000000000000000000002425 119.0
MMD1_k127_2451564_2 cellulose binding - - - 0.0000000000000000000000003121 123.0
MMD1_k127_2451564_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000001424 73.0
MMD1_k127_2475029_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 400.0
MMD1_k127_2475029_1 belongs to the thioredoxin family K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 321.0
MMD1_k127_2475029_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000003974 62.0
MMD1_k127_2475308_0 Transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000003175 212.0
MMD1_k127_2475308_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000001212 152.0
MMD1_k127_2475308_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000005336 109.0
MMD1_k127_2475308_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 GO:0000287,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0032991,GO:0036211,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046777,GO:0046872,GO:0071704,GO:0071944,GO:1901564,GO:1990904 - 0.00003284 48.0
MMD1_k127_2478474_0 4Fe-4S dicluster domain K06911 - - 5.831e-234 736.0
MMD1_k127_2478474_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 475.0
MMD1_k127_2478474_2 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000132 231.0
MMD1_k127_2485640_0 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 318.0
MMD1_k127_2485640_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000004129 135.0
MMD1_k127_2485640_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000002041 129.0
MMD1_k127_2485640_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000005386 65.0
MMD1_k127_2485640_4 Transglutaminase-like superfamily - - - 0.00000008394 64.0
MMD1_k127_2495971_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000002405 273.0
MMD1_k127_2495971_1 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000003728 171.0
MMD1_k127_2495971_2 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000003401 113.0
MMD1_k127_2495971_3 Cytochrome C assembly protein - - - 0.000000000000000000000000004709 121.0
MMD1_k127_2500674_0 Belongs to the PstS family K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 414.0
MMD1_k127_2500674_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 372.0
MMD1_k127_2500674_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 325.0
MMD1_k127_2500674_3 Phosphate transport system permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002386 296.0
MMD1_k127_2500674_4 Response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000000000000000000000000000000003768 210.0
MMD1_k127_2500674_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000002652 199.0
MMD1_k127_2500674_6 Histidine kinase K07636 - 2.7.13.3 0.000000000000009838 84.0
MMD1_k127_2500674_7 - - - - 0.0000000000006306 80.0
MMD1_k127_2500674_8 Protein of unknown function DUF72 - - - 0.0000002278 55.0
MMD1_k127_252901_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001068 277.0
MMD1_k127_252901_1 ABC transporter, permease protein K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001869 261.0
MMD1_k127_252901_2 pfam abc K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004207 246.0
MMD1_k127_252901_3 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000002756 254.0
MMD1_k127_252901_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000004026 212.0
MMD1_k127_252901_5 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.00000000000000000000000000000000000000000000000000007747 191.0
MMD1_k127_2539773_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 604.0
MMD1_k127_2539773_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K12339 - 2.5.1.47 0.00000000000000000000000000000000009088 135.0
MMD1_k127_2539773_2 proteolysis - - - 0.000000000000000000000000000000002069 138.0
MMD1_k127_2549828_0 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 308.0
MMD1_k127_2549828_1 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.00000000000000000000000000000000000002971 150.0
MMD1_k127_2549828_2 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000118 128.0
MMD1_k127_2549828_3 Protein of unknown function (DUF1573) - - - 0.00000000000008091 83.0
MMD1_k127_2558178_0 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 587.0
MMD1_k127_2558178_1 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 377.0
MMD1_k127_2558178_2 PFAM Rhomboid family protein K07059 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007924 269.0
MMD1_k127_2558178_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000002661 135.0
MMD1_k127_2558178_4 Protein of unknown function (DUF962) - - - 0.000000000000000000009735 98.0
MMD1_k127_2558570_0 transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 346.0
MMD1_k127_2558570_1 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003361 276.0
MMD1_k127_2558570_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000002014 214.0
MMD1_k127_2558570_3 ABC transporter permease K01992 - - 0.000000000000000000000000000000000000000000000003191 196.0
MMD1_k127_2558570_4 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000000131 138.0
MMD1_k127_2558570_5 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0008115 50.0
MMD1_k127_2564614_0 alpha beta alpha domain I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 347.0
MMD1_k127_2564614_1 Bacterial regulatory protein, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001443 291.0
MMD1_k127_2564614_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000001908 168.0
MMD1_k127_2564614_3 Transmembrane and - - - 0.0000000000000000000000000000000000000122 166.0
MMD1_k127_2564614_4 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000005507 97.0
MMD1_k127_2580049_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000008496 195.0
MMD1_k127_2580049_1 signal transduction histidine kinase K07642 - 2.7.13.3 0.000000000000000000000001332 117.0
MMD1_k127_2580049_2 Response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000001505 102.0
MMD1_k127_258775_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 415.0
MMD1_k127_258775_1 - - - - 0.00000000000000000000000000000000000000000000000001257 186.0
MMD1_k127_258775_2 amino acid - - - 0.000000000000000001188 88.0
MMD1_k127_2588061_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 408.0
MMD1_k127_2588061_1 PFAM Oligopeptide transporter OPT superfamily - - - 0.000000000000000000000000000000000000000000004706 170.0
MMD1_k127_2591310_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 511.0
MMD1_k127_2591310_1 PFAM MscS Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005395 254.0
MMD1_k127_2591418_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 369.0
MMD1_k127_2591418_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002084 261.0
MMD1_k127_2591418_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000003167 132.0
MMD1_k127_2591418_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000003397 120.0
MMD1_k127_2591418_4 PFAM glycosyl transferase family 2 K07011 - - 0.0000000001108 69.0
MMD1_k127_2595479_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 458.0
MMD1_k127_2595479_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 428.0
MMD1_k127_2595479_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000007496 216.0
MMD1_k127_2595479_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001526 213.0
MMD1_k127_2595479_4 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000132 146.0
MMD1_k127_2595479_5 Bacterial-like globin K06886 - - 0.000000000000000000000000000007239 124.0
MMD1_k127_2595479_6 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000001523 112.0
MMD1_k127_2595479_7 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 0.0000000001926 69.0
MMD1_k127_26071_0 Domain of unknown function (DUF4070) - - - 3.21e-225 710.0
MMD1_k127_26071_1 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000001476 223.0
MMD1_k127_26071_2 Squalene/phytoene synthase K00801 - 2.5.1.21 0.000000000000000000000000000000000000000000000000000000000000003662 228.0
MMD1_k127_26071_3 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.000000000009201 65.0
MMD1_k127_26071_4 Purine nucleoside permease (NUP) K01243 - 3.2.2.9 0.000014 56.0
MMD1_k127_2608721_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 407.0
MMD1_k127_2608721_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 299.0
MMD1_k127_2608721_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000004489 242.0
MMD1_k127_2608721_3 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000001175 213.0
MMD1_k127_2608721_4 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000001061 176.0
MMD1_k127_2608721_5 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000001753 159.0
MMD1_k127_2608721_6 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000001977 147.0
MMD1_k127_2608721_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000002069 111.0
MMD1_k127_2608721_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000007029 104.0
MMD1_k127_2608721_9 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000839 112.0
MMD1_k127_2609738_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000002447 261.0
MMD1_k127_2609738_1 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000004856 185.0
MMD1_k127_2609738_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000004502 132.0
MMD1_k127_2609738_3 Protein of unknown function (DUF2905) - - - 0.000000000000001142 78.0
MMD1_k127_2616426_0 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 594.0
MMD1_k127_2616426_1 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 318.0
MMD1_k127_2616426_2 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002563 282.0
MMD1_k127_2616426_3 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004676 260.0
MMD1_k127_2620495_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.102e-242 764.0
MMD1_k127_2620495_1 NHL repeat - - - 0.000000034 65.0
MMD1_k127_2621204_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 512.0
MMD1_k127_2621204_1 - - - - 0.00000000000000000000000000000000000000000000000000006068 198.0
MMD1_k127_2621204_2 Adenylate cyclase - - - 0.000000000001073 81.0
MMD1_k127_2621204_3 zinc ion binding - - - 0.000000006951 67.0
MMD1_k127_2621204_4 Forkhead associated domain - - - 0.00001439 58.0
MMD1_k127_2621204_5 Cell division protein ZapA K09888 - - 0.00002182 49.0
MMD1_k127_2626882_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 566.0
MMD1_k127_2626882_1 23S rRNA-intervening sequence protein - - - 0.0000000000000000000004713 100.0
MMD1_k127_2642222_0 - - - - 0.0000000000000000000000000000000000008049 158.0
MMD1_k127_2642222_1 Bacterial membrane protein YfhO - - - 0.00000000000001122 88.0
MMD1_k127_2642222_2 Bacterial membrane protein, YfhO - - - 0.0000000000006488 83.0
MMD1_k127_2642222_3 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0000000007719 70.0
MMD1_k127_2648161_0 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 2.422e-218 685.0
MMD1_k127_2648161_1 PFAM Thiamine pyrophosphate K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 359.0
MMD1_k127_2648161_2 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003688 223.0
MMD1_k127_2667928_0 Involved in the tonB-independent uptake of proteins - - - 8.942e-197 641.0
MMD1_k127_2667928_1 MaoC like domain K17865 - 4.2.1.55 0.0000000000000000000000000000000000000001776 154.0
MMD1_k127_2667928_2 - - - - 0.0000000000000000001249 101.0
MMD1_k127_2684564_0 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 564.0
MMD1_k127_2684564_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 284.0
MMD1_k127_2687652_0 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 381.0
MMD1_k127_2687652_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 340.0
MMD1_k127_2687652_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000215 168.0
MMD1_k127_2687652_3 Glycosyl transferase, family 2 K00786 - - 0.00000000000002097 84.0
MMD1_k127_2697446_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 3.813e-206 670.0
MMD1_k127_2697446_1 peptidyl-tyrosine sulfation - - - 0.00006325 49.0
MMD1_k127_2697629_0 PFAM BNR Asp-box repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004444 522.0
MMD1_k127_2697629_1 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 429.0
MMD1_k127_2697629_2 receptor K02014 - - 0.0000000000000005155 91.0
MMD1_k127_2704907_0 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 481.0
MMD1_k127_2704907_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 437.0
MMD1_k127_2704907_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000007771 185.0
MMD1_k127_2704907_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000005228 133.0
MMD1_k127_2709157_0 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 554.0
MMD1_k127_2709157_1 - - - - 0.0000000000000000000000000006289 120.0
MMD1_k127_2709157_2 Alpha beta K06889 - - 0.000007018 51.0
MMD1_k127_2742875_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000002138 226.0
MMD1_k127_2742875_1 Domain of unknown function (DUF4131) K02238 - - 0.000000000000000000000000004002 115.0
MMD1_k127_2742875_2 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000002522 73.0
MMD1_k127_2769907_0 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 537.0
MMD1_k127_2769907_1 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000003962 231.0
MMD1_k127_2769907_2 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000000000000000003941 153.0
MMD1_k127_2769907_4 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00009713 50.0
MMD1_k127_277084_0 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003271 246.0
MMD1_k127_277084_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000004079 166.0
MMD1_k127_2804537_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 336.0
MMD1_k127_2804537_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000002464 241.0
MMD1_k127_2804537_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000003445 99.0
MMD1_k127_2820437_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008163 434.0
MMD1_k127_2820437_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000000000000000000000000000000000000000000002334 179.0
MMD1_k127_2840527_0 xanthine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 475.0
MMD1_k127_2840527_1 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000007691 201.0
MMD1_k127_2840527_2 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000000000000000000000000001294 119.0
MMD1_k127_2840527_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000005108 111.0
MMD1_k127_2854775_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 332.0
MMD1_k127_2854775_1 ABC transporter permease K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005062 281.0
MMD1_k127_2854775_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001137 229.0
MMD1_k127_2854775_3 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000006129 211.0
MMD1_k127_2854775_4 Adenylyl- / guanylyl cyclase, catalytic domain K07814 - - 0.000000000000000000000000000000000003823 159.0
MMD1_k127_2854775_5 lipolytic protein G-D-S-L family - - - 0.0000000003086 66.0
MMD1_k127_291029_0 cellulose binding - - - 1.264e-319 994.0
MMD1_k127_291029_1 Protein kinase domain K12132 - 2.7.11.1 1.391e-237 766.0
MMD1_k127_291029_2 Peptidase S46 - - - 1.155e-206 666.0
MMD1_k127_291029_3 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 468.0
MMD1_k127_291029_4 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000001297 200.0
MMD1_k127_291029_5 - - - - 0.000000000000282 76.0
MMD1_k127_2920439_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 297.0
MMD1_k127_2920439_1 Nucleotidyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007612 261.0
MMD1_k127_2920439_2 DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000001561 234.0
MMD1_k127_2920439_4 Alpha-amylase domain K01176 - 3.2.1.1 0.000000000000000000000000000000000000000000000000003764 189.0
MMD1_k127_2920439_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000128 93.0
MMD1_k127_2920473_0 oligosaccharyl transferase activity - - - 0.0005837 52.0
MMD1_k127_2924046_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.9e-244 764.0
MMD1_k127_2924046_1 NAD-dependent epimerase dehydratase K01784,K12454 - 5.1.3.10,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 377.0
MMD1_k127_2924046_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 368.0
MMD1_k127_2924046_3 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005285 278.0
MMD1_k127_2924046_4 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000007645 229.0
MMD1_k127_2924046_5 PFAM Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000006023 197.0
MMD1_k127_2924046_6 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000001471 167.0
MMD1_k127_2924046_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000002324 139.0
MMD1_k127_2937490_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 494.0
MMD1_k127_2937490_1 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001048 288.0
MMD1_k127_2939229_0 MacB-like periplasmic core domain - - - 6.973e-194 629.0
MMD1_k127_2939229_1 coenzyme F420 binding K07226 - - 0.000000000000000000000000000000003213 132.0
MMD1_k127_2942063_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 584.0
MMD1_k127_2942063_1 Prolyl oligopeptidase K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 533.0
MMD1_k127_2942063_2 Flavin-binding monooxygenase-like K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 323.0
MMD1_k127_2952684_0 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 398.0
MMD1_k127_2952684_1 Domain of unknown function (DUF4440) - - - 0.00000000498 65.0
MMD1_k127_2953297_0 14-dihydroxy-2-naphthoate octaprenyltransferase K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000002222 200.0
MMD1_k127_2953297_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000006705 177.0
MMD1_k127_2953297_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000001382 128.0
MMD1_k127_2953297_3 Universal stress protein - - - 0.0000000000000001583 86.0
MMD1_k127_2953297_4 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0002845 49.0
MMD1_k127_296438_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 518.0
MMD1_k127_296438_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 357.0
MMD1_k127_296438_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0001866 53.0
MMD1_k127_297046_0 COG0500 SAM-dependent methyltransferases K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 383.0
MMD1_k127_2978062_0 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001921 280.0
MMD1_k127_2978062_1 enzyme binding K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000225 123.0
MMD1_k127_2978062_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000001998 55.0
MMD1_k127_2978232_0 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 567.0
MMD1_k127_2978232_1 HlyD family secretion protein K03585 - - 0.00000000000000000000000000000000834 130.0
MMD1_k127_2978232_2 YceI-like domain - - - 0.000000000000000000001784 102.0
MMD1_k127_2978488_0 Heat shock 70 kDa protein K04043 - - 2.101e-232 736.0
MMD1_k127_2978488_1 DnaJ central domain K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 320.0
MMD1_k127_2978488_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000007494 74.0
MMD1_k127_2980031_0 - - - - 0.000000000000000000000000000000000000000000000000002547 195.0
MMD1_k127_2980031_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000001902 191.0
MMD1_k127_2980031_2 Integrin alpha (beta-propellor repeats). - - - 0.00000008984 57.0
MMD1_k127_2983409_0 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 429.0
MMD1_k127_2983409_1 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 418.0
MMD1_k127_2983409_2 PFAM PIN domain - - - 0.00000000000000000000000000000000001917 141.0
MMD1_k127_2983409_3 Peptidase family M28 - - - 0.00000000000000000000000000000006594 126.0
MMD1_k127_2983409_4 PFAM SpoVT AbrB - - - 0.0000000002562 72.0
MMD1_k127_2986151_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 554.0
MMD1_k127_2986151_1 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 417.0
MMD1_k127_2986151_2 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 401.0
MMD1_k127_2993481_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 447.0
MMD1_k127_2993481_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 347.0
MMD1_k127_2993481_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 348.0
MMD1_k127_2993481_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 298.0
MMD1_k127_2993481_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000001555 193.0
MMD1_k127_2993481_5 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000202 179.0
MMD1_k127_2999388_0 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000007614 196.0
MMD1_k127_2999388_1 TonB dependent receptor K16092 - - 0.00000000000000000000000000000003882 140.0
MMD1_k127_2999388_2 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.000000002186 63.0
MMD1_k127_2999388_3 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000005794 53.0
MMD1_k127_2999388_4 - - - - 0.000008327 57.0
MMD1_k127_2999587_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009685 303.0
MMD1_k127_2999587_1 UPF0761 membrane protein K07058 - - 0.0000000000000003502 91.0
MMD1_k127_2999587_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000008812 69.0
MMD1_k127_3001700_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.041e-270 856.0
MMD1_k127_3001700_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000002373 201.0
MMD1_k127_3001700_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000001707 193.0
MMD1_k127_3001700_3 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000000000000000000004836 111.0
MMD1_k127_3001700_4 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000007257 98.0
MMD1_k127_3001700_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000002964 89.0
MMD1_k127_3001700_6 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000001169 79.0
MMD1_k127_3035831_0 Protein of unknown function, DUF255 K06888 - - 9.978e-199 640.0
MMD1_k127_3035831_1 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000000000000000000007461 203.0
MMD1_k127_3035831_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00172,K00441,K03522 - 1.12.98.1,1.2.7.1 0.00000000000000000000001251 109.0
MMD1_k127_3035831_3 PFAM Cytochrome b b6 domain - - - 0.000000000000000009085 84.0
MMD1_k127_3035831_4 PFAM PBS lyase HEAT domain protein repeat-containing protein K02288 - 4.4.1.32 0.000001047 61.0
MMD1_k127_3044769_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003673 289.0
MMD1_k127_3044769_1 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.0000000000000000000000000000000000000000000004992 177.0
MMD1_k127_3044769_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000005932 97.0
MMD1_k127_3049974_0 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 494.0
MMD1_k127_3049974_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 373.0
MMD1_k127_3049974_2 peptide-methionine (S)-S-oxide reductase activity K07304,K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000002032 247.0
MMD1_k127_3049974_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000001078 226.0
MMD1_k127_3049974_4 YCII-related domain - - - 0.00000000000000000000007807 106.0
MMD1_k127_3049974_5 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - 0.00000000000000000008103 91.0
MMD1_k127_3049974_6 - - - - 0.00000000000002812 84.0
MMD1_k127_3049974_7 LexA-binding, inner membrane-associated putative hydrolase - - - 0.0000000006438 64.0
MMD1_k127_3049974_8 - - - - 0.0006466 48.0
MMD1_k127_30548_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 333.0
MMD1_k127_30548_1 nuclear chromosome segregation - - - 0.000000000000000000000000000000000005296 147.0
MMD1_k127_30548_2 SMART RNP-1 like RNA-binding protein - - - 0.0000000000000000000000004099 107.0
MMD1_k127_30548_3 Transmembrane secretion effector - - - 0.00000000001098 73.0
MMD1_k127_3055433_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000004234 226.0
MMD1_k127_3055433_1 - - - - 0.0000000000000000000000000000000000000000000000000000000002577 217.0
MMD1_k127_3055433_2 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000006393 197.0
MMD1_k127_3055433_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000005924 120.0
MMD1_k127_3059683_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000489 225.0
MMD1_k127_3059683_1 hyperosmotic response - - - 0.0000000000000000000000000000000009642 138.0
MMD1_k127_306019_0 PAS fold-4 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 583.0
MMD1_k127_306019_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000009812 178.0
MMD1_k127_306019_2 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000003649 103.0
MMD1_k127_306019_3 MarC family integral membrane protein K05595 - - 0.0006317 43.0
MMD1_k127_3063677_0 TIGRFAM YD repeat protein - - - 0.0008845 53.0
MMD1_k127_3070560_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000005377 154.0
MMD1_k127_3070560_1 Glycosyl transferase, family 2 - - - 0.0000000000000009996 88.0
MMD1_k127_3070560_2 ubiE/COQ5 methyltransferase family - - - 0.00000000001765 70.0
MMD1_k127_3071313_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003729 286.0
MMD1_k127_3071313_1 CBS domain containing protein K03699 - - 0.000000000000000000000000000000000000000000000000000000000006102 224.0
MMD1_k127_3071313_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000008102 105.0
MMD1_k127_3075649_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 566.0
MMD1_k127_3075649_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 377.0
MMD1_k127_3075649_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000002254 141.0
MMD1_k127_3075649_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000003662 60.0
MMD1_k127_3081623_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1613.0
MMD1_k127_3081623_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07789 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 535.0
MMD1_k127_3081623_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 430.0
MMD1_k127_3083222_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 382.0
MMD1_k127_3083222_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 336.0
MMD1_k127_3083222_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000585 112.0
MMD1_k127_3083222_3 Bacterial membrane protein YfhO - - - 0.00000000007239 73.0
MMD1_k127_3110015_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 366.0
MMD1_k127_3110015_1 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 296.0
MMD1_k127_3110015_2 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0007031 47.0
MMD1_k127_3113061_0 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004232 252.0
MMD1_k127_3113061_1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000008266 222.0
MMD1_k127_3113061_2 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000005347 146.0
MMD1_k127_3113061_3 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000001441 134.0
MMD1_k127_3113061_4 Domain of unknown function (DUF1844) - - - 0.00000000009258 70.0
MMD1_k127_3113061_5 peptidyl-tyrosine sulfation - - - 0.000005391 59.0
MMD1_k127_3113451_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 337.0
MMD1_k127_3113451_1 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000177 242.0
MMD1_k127_3113451_2 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000008854 185.0
MMD1_k127_312181_0 Domain of unknown function (DUF4331) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 338.0
MMD1_k127_312181_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000002881 154.0
MMD1_k127_312181_2 PFAM Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000007313 112.0
MMD1_k127_312181_3 Ferritin-like domain - - - 0.0000000000000000000000001856 113.0
MMD1_k127_3133518_0 ATP-grasp domain K01905,K22224 - 6.2.1.13 3.954e-270 854.0
MMD1_k127_3133518_1 PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000001538 181.0
MMD1_k127_3133518_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000001629 122.0
MMD1_k127_3133531_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 441.0
MMD1_k127_3133531_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000001684 258.0
MMD1_k127_3133811_0 K+ potassium transporter K03549 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 399.0
MMD1_k127_3133811_1 PFAM Alpha beta hydrolase K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 310.0
MMD1_k127_3134009_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002612 264.0
MMD1_k127_3134009_1 helix_turn_helix ASNC type K03719 - - 0.00000000000000000000000000000000837 132.0
MMD1_k127_313787_0 MFS/sugar transport protein K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 342.0
MMD1_k127_313787_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000003367 191.0
MMD1_k127_313787_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000001072 160.0
MMD1_k127_313787_3 NADPH quinone reductase K00344 - 1.6.5.5 0.0000000000000002395 79.0
MMD1_k127_3138045_0 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 529.0
MMD1_k127_3138045_1 PFAM Cys Met metabolism K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 314.0
MMD1_k127_3138045_2 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001497 278.0
MMD1_k127_3138045_3 PFAM FecR protein - - - 0.00000000000000000006376 104.0
MMD1_k127_3138045_4 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000001996 93.0
MMD1_k127_3138045_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000002912 68.0
MMD1_k127_3138045_6 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0000003329 55.0
MMD1_k127_3154702_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 392.0
MMD1_k127_3154702_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 372.0
MMD1_k127_3177087_0 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005365 272.0
MMD1_k127_3177087_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000646 231.0
MMD1_k127_3177087_2 Ami_3 K01448 - 3.5.1.28 0.00001984 53.0
MMD1_k127_320780_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.0000000000000000000000000000000000000000000000001568 188.0
MMD1_k127_320780_1 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K03478 - 3.5.1.105 0.00000000000000000000000000000000000000003127 162.0
MMD1_k127_320780_2 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000163 144.0
MMD1_k127_322181_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000009586 211.0
MMD1_k127_322181_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000009033 128.0
MMD1_k127_322181_2 FecR protein - - - 0.0008111 51.0
MMD1_k127_3227588_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000003904 201.0
MMD1_k127_3227588_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000108 119.0
MMD1_k127_3227588_3 Transcriptional regulator, ModE family K02019 - - 0.00001617 50.0
MMD1_k127_324860_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 387.0
MMD1_k127_324860_1 - - - - 0.000000000000000000000000000000000009163 142.0
MMD1_k127_3270739_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 337.0
MMD1_k127_3270739_1 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000006603 142.0
MMD1_k127_3270739_2 overlaps another CDS with the same product name - - - 0.000000000000000000005533 101.0
MMD1_k127_3281341_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001308 270.0
MMD1_k127_3281341_1 Methyltransferase domain K00568 - 2.1.1.222,2.1.1.64 0.00000000000004929 82.0
MMD1_k127_3289721_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.872e-267 842.0
MMD1_k127_3289721_1 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000275 268.0
MMD1_k127_3289721_2 PAP2 superfamily - - - 0.00000000000000003307 93.0
MMD1_k127_3289721_3 Transcriptional regulatory protein, C terminal - - - 0.000000000002089 75.0
MMD1_k127_3289721_4 Phosphate acyltransferases K13507 - 2.3.1.15,2.3.1.42 0.000007468 57.0
MMD1_k127_3296388_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000001582 220.0
MMD1_k127_3296388_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000003461 164.0
MMD1_k127_3308757_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 381.0
MMD1_k127_3308757_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 385.0
MMD1_k127_3308757_2 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004732 278.0
MMD1_k127_3308757_3 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002435 231.0
MMD1_k127_3308757_4 Adenylylsulfate kinase K00860 - 2.7.1.25 0.000000000000000000000000000008037 130.0
MMD1_k127_3314466_0 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 387.0
MMD1_k127_3314466_1 Asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009605 334.0
MMD1_k127_3314466_2 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000167 227.0
MMD1_k127_3314466_3 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000007524 205.0
MMD1_k127_3314466_4 - - - - 0.000001183 53.0
MMD1_k127_3320741_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 432.0
MMD1_k127_3340543_0 Protein kinase domain K12132 - 2.7.11.1 1.048e-234 757.0
MMD1_k127_3340543_1 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 407.0
MMD1_k127_3340543_2 - - - - 0.000002895 52.0
MMD1_k127_3350950_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 334.0
MMD1_k127_3390207_0 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 326.0
MMD1_k127_3390207_1 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002027 268.0
MMD1_k127_3390207_2 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000006727 157.0
MMD1_k127_3390207_3 Yip1 domain - - - 0.00000000000004452 81.0
MMD1_k127_3484121_0 Alanine-glyoxylate amino-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000007183 237.0
MMD1_k127_3484121_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000001973 203.0
MMD1_k127_3484121_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00006513 47.0
MMD1_k127_3491320_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 399.0
MMD1_k127_3491320_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 301.0
MMD1_k127_3491320_2 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000002303 211.0
MMD1_k127_3491320_3 - - - - 0.0000000000000000001132 96.0
MMD1_k127_3507752_0 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 314.0
MMD1_k127_3507752_1 peptidase U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 293.0
MMD1_k127_3507752_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 296.0
MMD1_k127_3507752_3 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000003305 222.0
MMD1_k127_3507752_4 peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000008299 181.0
MMD1_k127_3507752_5 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000002254 154.0
MMD1_k127_3527727_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 432.0
MMD1_k127_3527727_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 292.0
MMD1_k127_3527727_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000001359 201.0
MMD1_k127_3559781_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 361.0
MMD1_k127_3559781_1 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000001809 237.0
MMD1_k127_3559781_2 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000002273 194.0
MMD1_k127_3559781_3 TPM domain - - - 0.0000000000000000000000000000000000002819 158.0
MMD1_k127_3559781_4 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000002939 132.0
MMD1_k127_3559781_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000001284 95.0
MMD1_k127_3559781_6 Phosphoglycerate mutase family K08296 - - 0.000000000000000000989 92.0
MMD1_k127_3580273_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 491.0
MMD1_k127_3580273_1 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000003911 202.0
MMD1_k127_3580273_2 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0004905 53.0
MMD1_k127_3636128_0 DNA-directed 5'-3' RNA polymerase activity K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 4.131e-280 874.0
MMD1_k127_3648485_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 437.0
MMD1_k127_3648485_1 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000222 268.0
MMD1_k127_3648485_2 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000007082 217.0
MMD1_k127_3648485_3 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000002072 150.0
MMD1_k127_3648485_4 - K12065 - - 0.00000000000000000000000000001457 123.0
MMD1_k127_3651010_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 436.0
MMD1_k127_3651010_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 382.0
MMD1_k127_3651010_2 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 373.0
MMD1_k127_3651575_0 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 307.0
MMD1_k127_3651575_1 copper resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 297.0
MMD1_k127_3651575_2 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000007354 243.0
MMD1_k127_3651575_3 Cytochrome c - - - 0.00000000000000000000000000000006646 132.0
MMD1_k127_3651575_4 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.000000000000000000000002177 108.0
MMD1_k127_3661067_0 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 385.0
MMD1_k127_3661067_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008312 297.0
MMD1_k127_3661067_2 - - - - 0.0000000000000000000000000000000000000000000000000000000009233 207.0
MMD1_k127_3664586_0 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 508.0
MMD1_k127_3664586_1 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003632 270.0
MMD1_k127_3664586_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000009381 244.0
MMD1_k127_3664586_3 Cell division protein FtsQ K03589 - - 0.0000000000009301 78.0
MMD1_k127_3672499_0 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 366.0
MMD1_k127_3672499_1 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000002654 198.0
MMD1_k127_3672499_2 cytochrome C oxidase subunit II K02275 - 1.9.3.1 0.0000000000000000000000000000000000004166 158.0
MMD1_k127_3672499_3 Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 0.000000001251 68.0
MMD1_k127_3679470_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 394.0
MMD1_k127_3679470_1 metal ion transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 363.0
MMD1_k127_3679470_2 Iodothyronine deiodinase - - - 0.000000000000000000000000002003 115.0
MMD1_k127_3680410_0 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 290.0
MMD1_k127_3680410_1 MerR HTH family regulatory protein K13640 - - 0.000000000000000000000000000000009527 130.0
MMD1_k127_3680410_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000004281 113.0
MMD1_k127_3680410_3 Peptidase M56 - - - 0.000000000009569 78.0
MMD1_k127_3680410_4 Peptidase M56 - - - 0.00004934 48.0
MMD1_k127_369170_0 Zinc-binding dehydrogenase K07538 - 1.1.1.368 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009591 372.0
MMD1_k127_369170_1 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 369.0
MMD1_k127_369170_2 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000005182 196.0
MMD1_k127_369170_3 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000005736 181.0
MMD1_k127_369170_4 Psort location Cytoplasmic, score K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000153 191.0
MMD1_k127_3722034_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 401.0
MMD1_k127_3722034_1 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 385.0
MMD1_k127_3722034_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000003065 227.0
MMD1_k127_3722034_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000002193 84.0
MMD1_k127_3728955_0 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 496.0
MMD1_k127_3728955_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006277 274.0
MMD1_k127_3728955_2 TIGRFAM daunorubicin resistance ABC transporter ATPase subunit K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001306 255.0
MMD1_k127_3728955_3 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007011 249.0
MMD1_k127_3728955_4 modulates the activities of several proteins which are inactive in their K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000408 245.0
MMD1_k127_3728955_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000004235 208.0
MMD1_k127_3728955_6 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000006811 192.0
MMD1_k127_3728955_7 - - - - 0.0000000000000000000000000000000009795 136.0
MMD1_k127_3728955_8 COG COG0845 Membrane-fusion protein K01993 - - 0.00000001614 65.0
MMD1_k127_3739817_0 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 310.0
MMD1_k127_3739817_1 tetratricopeptide repeat - - - 0.000000000000004423 89.0
MMD1_k127_3743866_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.167e-233 737.0
MMD1_k127_3743866_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 554.0
MMD1_k127_3743866_2 GYD domain - - - 0.00000000000000000000000000000005821 127.0
MMD1_k127_3743866_3 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000001755 104.0
MMD1_k127_3751509_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 335.0
MMD1_k127_3767467_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734 548.0
MMD1_k127_3767467_1 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 320.0
MMD1_k127_3767467_2 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000007535 224.0
MMD1_k127_3767467_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000002195 64.0
MMD1_k127_3770645_0 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000009386 266.0
MMD1_k127_3770645_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000001881 66.0
MMD1_k127_3770645_2 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.000003942 59.0
MMD1_k127_3770645_3 Phospholipase D. Active site motifs. K06131 - - 0.0001006 46.0
MMD1_k127_3772929_0 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000001141 245.0
MMD1_k127_3772929_1 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000001422 124.0
MMD1_k127_3784404_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000001874 214.0
MMD1_k127_3786153_0 PFAM CBS domain containing protein K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 340.0
MMD1_k127_3786153_1 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000003276 276.0
MMD1_k127_3790420_0 Dehydrogenase E1 component K11381 - 1.2.4.4 1.563e-229 719.0
MMD1_k127_3790420_1 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000151 114.0
MMD1_k127_3790420_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000002873 65.0
MMD1_k127_3808113_0 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 571.0
MMD1_k127_3808113_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 332.0
MMD1_k127_3808113_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 312.0
MMD1_k127_3808113_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001495 283.0
MMD1_k127_3808113_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000002024 228.0
MMD1_k127_3808113_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000001358 191.0
MMD1_k127_3808113_6 mRNA binding K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000001462 175.0
MMD1_k127_3808113_7 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000002082 167.0
MMD1_k127_3808113_8 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000001366 85.0
MMD1_k127_3814417_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000002926 229.0
MMD1_k127_3818649_0 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 572.0
MMD1_k127_3818649_1 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 441.0
MMD1_k127_3827057_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 544.0
MMD1_k127_3827057_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 304.0
MMD1_k127_3827057_2 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000003111 243.0
MMD1_k127_3827057_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000005419 181.0
MMD1_k127_3827057_4 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000001681 186.0
MMD1_k127_3827057_5 Domain of unknown function (DUF4340) - - - 0.0000000000000004527 91.0
MMD1_k127_3827057_6 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000001598 75.0
MMD1_k127_3827057_7 Protein of unknown function (DUF1499) - - - 0.0000000004044 64.0
MMD1_k127_3831171_0 PFAM peptidase M61 - - - 2.155e-208 665.0
MMD1_k127_3831171_1 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 309.0
MMD1_k127_3831171_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000009258 117.0
MMD1_k127_3831171_3 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.00000000000000000804 97.0
MMD1_k127_3848492_0 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 325.0
MMD1_k127_3848492_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003352 248.0
MMD1_k127_3848492_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000461 114.0
MMD1_k127_3848587_0 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 532.0
MMD1_k127_3848587_1 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 418.0
MMD1_k127_3848587_2 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 317.0
MMD1_k127_3848587_3 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 314.0
MMD1_k127_3848587_4 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 319.0
MMD1_k127_3848587_5 - K07018 - - 0.00000000000000000000000000000000000000000005735 170.0
MMD1_k127_3848587_6 AMMECR1 K09141 - - 0.000000000000000000000000000000000000000007007 169.0
MMD1_k127_3848587_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000003797 138.0
MMD1_k127_3854982_0 Peptidase family M28 - - - 0.0000000000006036 77.0
MMD1_k127_3854982_1 Bacterial membrane protein YfhO - - - 0.00000000307 70.0
MMD1_k127_3854982_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000001354 61.0
MMD1_k127_3857514_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 - 1.4.1.4 5.143e-241 772.0
MMD1_k127_3857514_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 327.0
MMD1_k127_3857514_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000005208 228.0
MMD1_k127_3861_0 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000258 285.0
MMD1_k127_3861_1 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000007588 265.0
MMD1_k127_3861_2 Psort location Cytoplasmic, score K00008,K00060 - 1.1.1.103,1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000008975 237.0
MMD1_k127_3861_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000008461 213.0
MMD1_k127_3861_4 Fic/DOC family K07341 - - 0.000000000000000000000000001513 122.0
MMD1_k127_3861_5 protein involved in outer membrane biogenesis K07289 - - 0.00003205 57.0
MMD1_k127_3867209_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 345.0
MMD1_k127_3867209_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000004982 178.0
MMD1_k127_3867209_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000001559 131.0
MMD1_k127_3867209_3 - - - - 0.00000001027 65.0
MMD1_k127_3898146_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 343.0
MMD1_k127_3898146_1 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 320.0
MMD1_k127_3898146_2 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009747 270.0
MMD1_k127_3898146_3 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001363 253.0
MMD1_k127_3898146_4 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000008565 154.0
MMD1_k127_3898146_5 MlaD protein K02067 - - 0.0000000000000000000000000000000001074 148.0
MMD1_k127_3909398_0 heme binding K21472 - - 0.000000000000000000000000000000000000000000000000000000001007 209.0
MMD1_k127_3909398_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000002926 199.0
MMD1_k127_3909398_3 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000001444 88.0
MMD1_k127_3912308_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 418.0
MMD1_k127_3912308_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.00000000000000000000000000000000000000000000000000000001022 203.0
MMD1_k127_3912432_0 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 332.0
MMD1_k127_3912432_1 YbaK prolyl-tRNA synthetase associated region - - - 0.00000000000000000000000000000008746 127.0
MMD1_k127_3912432_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000001872 123.0
MMD1_k127_3912432_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000001199 93.0
MMD1_k127_3912432_4 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.000001866 52.0
MMD1_k127_3922741_0 cluster binding protein K18929 - - 8.109e-211 666.0
MMD1_k127_3922741_1 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 346.0
MMD1_k127_3922741_2 LUD domain K00782 - - 0.0000000000000000000000000000000000006298 147.0
MMD1_k127_3922741_3 COG1145 Ferredoxin - - - 0.00000000000000000000000466 105.0
MMD1_k127_3941299_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 428.0
MMD1_k127_3941299_1 sulfur carrier activity K04085 - - 0.0000000000000005096 81.0
MMD1_k127_3995667_0 Involved in the tonB-independent uptake of proteins - - - 6.225e-238 764.0
MMD1_k127_3995667_1 Protein chain release factor B K15034 - - 0.0000000000000000000000000004936 124.0
MMD1_k127_3995667_2 Bacterial SH3 domain homologues - - - 0.00000000002194 72.0
MMD1_k127_3995667_3 - - - - 0.000000008711 59.0
MMD1_k127_4050884_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 596.0
MMD1_k127_4050884_1 Protein of unknown function (DUF971) - - - 0.00000000000000000000896 94.0
MMD1_k127_4051482_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001715 289.0
MMD1_k127_4051482_2 Elongation factor G, domain IV K02355 - - 0.00002287 46.0
MMD1_k127_4069831_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 450.0
MMD1_k127_4069831_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003716 262.0
MMD1_k127_4069831_2 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000136 237.0
MMD1_k127_4069831_3 Cupin domain - - - 0.000000000000000000000344 96.0
MMD1_k127_4095392_0 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000625 252.0
MMD1_k127_4095392_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000001855 193.0
MMD1_k127_4095392_2 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.000000000000000000000000313 113.0
MMD1_k127_4095392_3 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.00000000001342 74.0
MMD1_k127_4095392_4 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000001538 63.0
MMD1_k127_4100945_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1432.0
MMD1_k127_410683_0 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000002688 196.0
MMD1_k127_410683_1 Enoyl-CoA hydratase - - - 0.0000000000000000000000000001725 124.0
MMD1_k127_410683_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000004905 82.0
MMD1_k127_410683_3 Belongs to the arylamine N-acetyltransferase family K00622 - 2.3.1.5 0.000001072 61.0
MMD1_k127_4135392_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 1.536e-313 983.0
MMD1_k127_4135392_1 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007294 295.0
MMD1_k127_4135392_2 2Fe-2S -binding K13483 - - 0.000000000000000000000000000000000000000000000000000000000000000001325 243.0
MMD1_k127_4135392_3 - - - - 0.0000000000000000000000000000000000000000000085 175.0
MMD1_k127_4135392_4 DinB superfamily - - - 0.0000000000000000000000000000006312 136.0
MMD1_k127_4176149_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 515.0
MMD1_k127_4176149_1 - K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 442.0
MMD1_k127_4176149_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000002484 229.0
MMD1_k127_4176149_3 MOSC domain - - - 0.0000000000000000000000000000000000000000000000921 173.0
MMD1_k127_4176149_4 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000003441 114.0
MMD1_k127_4176149_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000001495 49.0
MMD1_k127_4180694_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 384.0
MMD1_k127_4180694_1 Domain of Unknown Function (DUF1259) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001043 261.0
MMD1_k127_4180694_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000001109 253.0
MMD1_k127_4183343_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004053 250.0
MMD1_k127_4183343_1 Adenylate cyclase - - - 0.000000000000000008571 96.0
MMD1_k127_4183343_2 diguanylate cyclase - - - 0.00005166 55.0
MMD1_k127_4288360_1 DnaJ molecular chaperone homology domain - - - 0.0000000000000008141 87.0
MMD1_k127_4288360_2 Domain of unknown function (DUF4126) - - - 0.0000002891 61.0
MMD1_k127_4288360_3 YacP-like NYN domain K06962 - - 0.000005226 55.0
MMD1_k127_4304116_0 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000000006224 220.0
MMD1_k127_4304116_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000001159 191.0
MMD1_k127_4304116_2 Rhodanese domain protein - - - 0.000000000000000000000001883 104.0
MMD1_k127_4308281_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000005119 213.0
MMD1_k127_4308281_1 Glutathione peroxidase - - - 0.000000000000000000000003113 111.0
MMD1_k127_4308281_2 L-asparaginase II - - - 0.0000000000000000000001289 110.0
MMD1_k127_4308281_3 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000009189 93.0
MMD1_k127_4308281_4 chlorophyll binding K03286,K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000203 53.0
MMD1_k127_4328580_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 451.0
MMD1_k127_4328580_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 381.0
MMD1_k127_4328580_2 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000007233 255.0
MMD1_k127_4328580_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01560,K07025,K20862 - 3.1.3.102,3.1.3.104,3.8.1.2 0.000000000000000000000000000001039 128.0
MMD1_k127_4347769_0 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 400.0
MMD1_k127_4347769_1 deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000002771 241.0
MMD1_k127_4347769_2 protein histidine kinase activity - - - 0.0000000000000000003864 101.0
MMD1_k127_4347769_3 chemotaxis protein K03406 - - 0.0000000000000008756 90.0
MMD1_k127_4349152_0 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 339.0
MMD1_k127_4349152_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000008958 242.0
MMD1_k127_4349152_2 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000152 133.0
MMD1_k127_4349152_3 Amino acid permease K03294 - - 0.000003989 49.0
MMD1_k127_4374762_0 Belongs to the SIS family. GutQ KpsF subfamily K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 314.0
MMD1_k127_4374762_1 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000675 280.0
MMD1_k127_4374762_2 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.000002219 50.0
MMD1_k127_4379840_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 396.0
MMD1_k127_4379840_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 344.0
MMD1_k127_4379840_2 domain, Protein - - - 0.000000001202 66.0
MMD1_k127_4379840_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00001081 57.0
MMD1_k127_4379840_4 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.0004094 51.0
MMD1_k127_4381041_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 1.918e-315 1007.0
MMD1_k127_4381041_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 446.0
MMD1_k127_4381041_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000007968 175.0
MMD1_k127_4382491_0 cellulose binding - - - 2.658e-199 634.0
MMD1_k127_4388110_0 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 364.0
MMD1_k127_4388110_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000002523 152.0
MMD1_k127_4388110_2 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.000000000000000000000000002969 114.0
MMD1_k127_4390590_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000009505 237.0
MMD1_k127_4390590_1 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000006038 183.0
MMD1_k127_4390590_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000008593 152.0
MMD1_k127_4390590_3 SnoaL-like domain - - - 0.0001312 47.0
MMD1_k127_4399184_0 Belongs to the pseudouridine synthase RsuA family K06178,K06182,K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000658 232.0
MMD1_k127_4399184_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000001634 186.0
MMD1_k127_4399184_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000001317 165.0
MMD1_k127_4399184_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000156 150.0
MMD1_k127_4399184_4 PFAM peptidase M50 - - - 0.0000000000001637 74.0
MMD1_k127_4400674_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 467.0
MMD1_k127_4400674_1 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 377.0
MMD1_k127_4400674_2 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 368.0
MMD1_k127_4400674_3 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000003102 199.0
MMD1_k127_4400674_4 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000309 153.0
MMD1_k127_4400674_5 Domain of unknown function (DUF374) K02527,K09778 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000005476 150.0
MMD1_k127_4400674_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000005003 108.0
MMD1_k127_4400674_7 - - - - 0.00001025 51.0
MMD1_k127_4403723_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 372.0
MMD1_k127_4403723_1 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.0000000000000000000000000002022 124.0
MMD1_k127_4403723_2 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000007485 104.0
MMD1_k127_4403723_3 Peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.000000000000000002549 93.0
MMD1_k127_4403723_4 - K09794 - - 0.0001167 48.0
MMD1_k127_4403758_0 Involved in galactofuranosyl biosynthesis converts UDO-GlcP to UDP-GalP catalytic activity UDP- glucopyranose UDP-galactopyranose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 502.0
MMD1_k127_4403758_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066,K02472,K02474,K13015 - 1.1.1.132,1.1.1.136,1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001507 274.0
MMD1_k127_4403758_2 Glycosyl transferase - - - 0.0000000000000000000000000000000003811 144.0
MMD1_k127_4403758_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044464,GO:0071944 2.1.1.163,2.1.1.201 0.0000000000000003098 93.0
MMD1_k127_4406386_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000007344 217.0
MMD1_k127_4406386_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000001382 157.0
MMD1_k127_4406386_2 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000000000000005106 98.0
MMD1_k127_4406386_3 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000004615 59.0
MMD1_k127_4406448_0 peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 524.0
MMD1_k127_4406448_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000001386 211.0
MMD1_k127_4406448_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00244,K00278 GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.3.5.4,1.4.3.16 0.00000000000000000000000000000000000000002982 155.0
MMD1_k127_4406875_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 437.0
MMD1_k127_4406875_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 374.0
MMD1_k127_4406875_2 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 305.0
MMD1_k127_4406875_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002402 289.0
MMD1_k127_4406875_4 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001888 277.0
MMD1_k127_4406875_5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000001839 125.0
MMD1_k127_4406875_6 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000004672 131.0
MMD1_k127_4406875_7 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000764 93.0
MMD1_k127_4406875_8 Protein of unknown function (FYDLN_acid) - - - 0.000000000001952 71.0
MMD1_k127_4406875_9 Tetratricopeptide repeat - - - 0.0000002551 59.0
MMD1_k127_4408895_0 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000385 271.0
MMD1_k127_4408895_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000001399 226.0
MMD1_k127_4408895_2 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000001368 147.0
MMD1_k127_4423442_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 516.0
MMD1_k127_4423442_1 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000003373 250.0
MMD1_k127_4424193_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 6.163e-228 752.0
MMD1_k127_4424193_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 7.375e-212 666.0
MMD1_k127_4424193_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 599.0
MMD1_k127_4424193_3 Tricorn protease homolog - - - 0.00003745 46.0
MMD1_k127_4424918_0 radical SAM domain protein - - - 0.000005335 57.0
MMD1_k127_4437631_0 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 418.0
MMD1_k127_4437631_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 402.0
MMD1_k127_4437631_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000604 105.0
MMD1_k127_4441488_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 496.0
MMD1_k127_4441488_1 Belongs to the DEAD box helicase family K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 470.0
MMD1_k127_4441488_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 426.0
MMD1_k127_4441488_3 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000000007669 135.0
MMD1_k127_4441488_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K02381 GO:0001539,GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009361,GO:0009987,GO:0016310,GO:0016874,GO:0016877,GO:0016878,GO:0019538,GO:0031974,GO:0032991,GO:0036211,GO:0040011,GO:0042709,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0046777,GO:0048870,GO:0051179,GO:0051674,GO:0070013,GO:0071704,GO:0071973,GO:0097588,GO:1901564,GO:1902494 6.2.1.5 0.000000000002317 70.0
MMD1_k127_4451346_0 Glycosyl transferase family 2 K10012,K20534 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 390.0
MMD1_k127_4451346_1 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001406 279.0
MMD1_k127_4451346_2 3-beta hydroxysteroid dehydrogenase/isomerase family K10011,K12449 - 1.1.1.305,2.1.2.13 0.00000000000000000000000000000000001255 139.0
MMD1_k127_4451944_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000127 150.0
MMD1_k127_4451944_1 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000002973 148.0
MMD1_k127_4451944_2 Outer membrane lipoprotein - - - 0.00000000000000000000002374 111.0
MMD1_k127_4451944_3 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000003401 97.0
MMD1_k127_4451944_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00000007591 57.0
MMD1_k127_4452356_0 radical SAM domain protein - - - 5.497e-219 691.0
MMD1_k127_4452356_1 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006572 250.0
MMD1_k127_4452356_2 Patatin-like phospholipase - - - 0.0002336 53.0
MMD1_k127_4459563_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.084e-258 807.0
MMD1_k127_4459563_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 3.523e-233 727.0
MMD1_k127_4459563_2 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001879 273.0
MMD1_k127_4459563_3 Cytochrome c - - - 0.000000000000000000000000000000000000005095 149.0
MMD1_k127_4460793_0 Succinyl-CoA ligase like flavodoxin domain - - - 4.649e-272 864.0
MMD1_k127_4460793_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000008421 55.0
MMD1_k127_4460793_2 Universal stress protein family K07090 - - 0.000000151 62.0
MMD1_k127_4462149_0 histone deacetylase K11407 - 3.5.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 323.0
MMD1_k127_4462149_1 LssY C-terminus - - - 0.00000000000000000000000000000000000000000000000000000893 209.0
MMD1_k127_4462149_2 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.00000000000000000000002088 111.0
MMD1_k127_4462149_3 bacteriochlorophyll K04040 - 2.5.1.133,2.5.1.62 0.0000000000003115 82.0
MMD1_k127_4462199_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000002072 130.0
MMD1_k127_4462199_1 Putative modulator of DNA gyrase - - - 0.0000000002217 73.0
MMD1_k127_4462199_2 Protein of unknown function (DUF507) K09804 - - 0.0001691 49.0
MMD1_k127_4462305_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 510.0
MMD1_k127_4462305_1 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000653 221.0
MMD1_k127_4462305_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000003279 168.0
MMD1_k127_4462735_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 366.0
MMD1_k127_4462850_0 Abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002891 271.0
MMD1_k127_4462850_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001664 261.0
MMD1_k127_4462850_2 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008206 245.0
MMD1_k127_4462850_3 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000007261 250.0
MMD1_k127_4462850_4 AMP-binding enzyme C-terminal domain K18660,K18661 - - 0.00000000000000000000000000000000000000000000002305 189.0
MMD1_k127_4464455_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 585.0
MMD1_k127_4464455_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 335.0
MMD1_k127_4464455_2 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000002322 213.0
MMD1_k127_4464455_3 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000001284 166.0
MMD1_k127_4464455_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000000000006641 123.0
MMD1_k127_4472604_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1129.0
MMD1_k127_4472604_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.59e-292 928.0
MMD1_k127_4472604_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000001817 238.0
MMD1_k127_4472604_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000002937 220.0
MMD1_k127_4472604_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000004828 190.0
MMD1_k127_4480305_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 354.0
MMD1_k127_4480305_1 Glycosyl transferases group 1 - - - 0.00000122 57.0
MMD1_k127_4482769_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 332.0
MMD1_k127_4483991_0 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000004593 235.0
MMD1_k127_4483991_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000008978 126.0
MMD1_k127_4483991_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000001112 69.0
MMD1_k127_4484344_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.741e-224 725.0
MMD1_k127_4484344_2 DNA protecting protein DprA K04096 - - 0.00000000000000000000003312 104.0
MMD1_k127_4485422_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.835e-239 760.0
MMD1_k127_4485422_1 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 338.0
MMD1_k127_4485422_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000001848 142.0
MMD1_k127_4485422_3 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000000000007314 130.0
MMD1_k127_4485422_4 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000008476 87.0
MMD1_k127_4485422_5 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000001262 81.0
MMD1_k127_4485422_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0003039 45.0
MMD1_k127_4493786_0 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 388.0
MMD1_k127_4493786_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000002206 210.0
MMD1_k127_4497386_0 Uncharacterized protein family (UPF0051) K09014 - - 6.357e-239 743.0
MMD1_k127_4497386_1 domain, Protein - - - 0.00000000000000000002255 105.0
MMD1_k127_4500233_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 339.0
MMD1_k127_4500233_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 327.0
MMD1_k127_4500233_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 295.0
MMD1_k127_4500233_3 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.000007628 50.0
MMD1_k127_4500233_4 gag-polyprotein putative aspartyl protease - - - 0.0005439 51.0
MMD1_k127_450323_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 393.0
MMD1_k127_450323_1 Bacterial membrane protein YfhO - - - 0.0001326 51.0
MMD1_k127_4505225_0 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 315.0
MMD1_k127_4505225_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007986 248.0
MMD1_k127_4505225_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000004844 235.0
MMD1_k127_4505225_3 Transport permease protein K09688,K09690 - - 0.0000000000000000000000000000000000001226 151.0
MMD1_k127_4505225_4 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000005797 121.0
MMD1_k127_4505225_5 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000005545 123.0
MMD1_k127_4505225_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000007701 88.0
MMD1_k127_4510753_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 291.0
MMD1_k127_4510753_1 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000001101 213.0
MMD1_k127_4510753_2 Sporulation and spore germination - - - 0.000000000000007587 83.0
MMD1_k127_4523047_0 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001205 265.0
MMD1_k127_4528217_0 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003406 292.0
MMD1_k127_4528217_1 General secretory system II, protein E domain protein K02652 - - 0.000000000000000000000000000001327 126.0
MMD1_k127_4528217_2 general secretion pathway protein D K02453 - - 0.000074 53.0
MMD1_k127_4530492_0 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000000000000001613 204.0
MMD1_k127_4530492_1 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000001146 157.0
MMD1_k127_4530492_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000005344 113.0
MMD1_k127_4530492_3 dna polymerase iii K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000001793 110.0
MMD1_k127_4530492_4 Glycosyltransferase, group 2 family protein K07011 - - 0.0000000005743 66.0
MMD1_k127_4530492_5 PFAM PEGA domain - - - 0.00003431 55.0
MMD1_k127_453635_0 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 355.0
MMD1_k127_453635_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 323.0
MMD1_k127_453635_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 3.4.11.1 0.00000000000000000000000000000000000000000003975 183.0
MMD1_k127_453635_3 COG3764 Sortase (surface protein transpeptidase) K07284 - 3.4.22.70 0.0001814 51.0
MMD1_k127_4540106_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000001004 182.0
MMD1_k127_4540106_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.000000000000000000000003969 110.0
MMD1_k127_4540106_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000005921 90.0
MMD1_k127_4540106_3 response to nickel cation K07722 - - 0.00000000002599 66.0
MMD1_k127_4540109_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 1.575e-279 891.0
MMD1_k127_4540109_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 354.0
MMD1_k127_4540109_10 sodium:proton antiporter activity K03316 - - 0.000000000000000000000000000000000000000008411 157.0
MMD1_k127_4540109_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.00000000000000000000000005104 115.0
MMD1_k127_4540109_12 - - - - 0.000000000000002288 78.0
MMD1_k127_4540109_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000001056 72.0
MMD1_k127_4540109_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 325.0
MMD1_k127_4540109_3 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
MMD1_k127_4540109_4 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000003948 245.0
MMD1_k127_4540109_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000491 213.0
MMD1_k127_4540109_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000004599 199.0
MMD1_k127_4540109_7 cytochrome - - - 0.000000000000000000000000000000000000000000000002277 179.0
MMD1_k127_4540109_8 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K00558,K07457,K10773 - 2.1.1.37,4.2.99.18 0.000000000000000000000000000000000000000000000002642 183.0
MMD1_k127_4540109_9 smart pdz dhr glgf - - - 0.0000000000000000000000000000000000000000000002828 187.0
MMD1_k127_4540151_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 345.0
MMD1_k127_4540151_1 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 304.0
MMD1_k127_4540151_2 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000001077 214.0
MMD1_k127_4540151_3 TIGRFAM TonB family protein K03832 - - 0.0000003378 63.0
MMD1_k127_4549846_0 Sulfatase - - - 0.0000000000000000000000000000000007469 149.0
MMD1_k127_4549846_1 Glycosyltransferase like family 2 - - - 0.0000000000000008523 82.0
MMD1_k127_4552176_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000001241 243.0
MMD1_k127_4552176_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000181 64.0
MMD1_k127_4552965_0 Protein kinase domain K12132 - 2.7.11.1 3.208e-249 797.0
MMD1_k127_4552965_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 422.0
MMD1_k127_4552965_2 Sulfate ABC transporter substrate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000006427 205.0
MMD1_k127_4552965_3 sulfate ABC transporter K02046 - - 0.0000000000000000000000000000000000000000000000005067 188.0
MMD1_k127_4552965_4 - - - - 0.0000002927 57.0
MMD1_k127_4555555_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 454.0
MMD1_k127_4555555_1 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 305.0
MMD1_k127_4555821_0 Elongation factor SelB winged helix 3 K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007378 443.0
MMD1_k127_4555821_1 Yqey-like protein K09117 - - 0.00000000000000000000004964 102.0
MMD1_k127_4555821_2 Gram-negative bacterial TonB protein C-terminal - - - 0.00007169 53.0
MMD1_k127_4560465_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 577.0
MMD1_k127_456341_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 381.0
MMD1_k127_456341_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 352.0
MMD1_k127_4564990_0 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000006041 143.0
MMD1_k127_4564990_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000001965 145.0
MMD1_k127_4564990_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000001705 94.0
MMD1_k127_456720_0 NTPase - - - 0.0000000000000000000000000000000000000000006064 162.0
MMD1_k127_456720_1 stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000001945 127.0
MMD1_k127_456720_2 Thioesterase superfamily K07107 - - 0.00000000000000000000000008034 111.0
MMD1_k127_456720_3 RNA-binding - - - 0.00008874 46.0
MMD1_k127_4574902_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 8.178e-217 690.0
MMD1_k127_4574902_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 548.0
MMD1_k127_4580982_0 Pfam:Arch_ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 288.0
MMD1_k127_4580982_1 UvrD/REP helicase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000005469 229.0
MMD1_k127_4580982_2 Hydrolase - - - 0.00000000000000000000000000000000000000000000000000004783 206.0
MMD1_k127_4580982_3 - - - - 0.000000000000000000000000000003454 136.0
MMD1_k127_4580982_4 Chlorophyllase - - - 0.0000000000000009299 91.0
MMD1_k127_459343_0 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000001471 130.0
MMD1_k127_459343_1 Belongs to the peptidase S8 family K14647 - - 0.0000000000000000004344 97.0
MMD1_k127_459343_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:0071944,GO:1901576 2.5.1.19 0.000004605 53.0
MMD1_k127_4598327_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 2.187e-317 992.0
MMD1_k127_4598327_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.533e-281 885.0
MMD1_k127_4598327_10 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000000001594 84.0
MMD1_k127_4598327_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 419.0
MMD1_k127_4598327_3 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 355.0
MMD1_k127_4598327_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 352.0
MMD1_k127_4598327_5 Iron/manganese superoxide dismutases, alpha-hairpin domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 287.0
MMD1_k127_4598327_6 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000007343 270.0
MMD1_k127_4598327_7 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000004876 247.0
MMD1_k127_4598327_8 - K00241 - - 0.0000000000000000000000000000000000000000000000000000000006404 209.0
MMD1_k127_4598327_9 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000005488 157.0
MMD1_k127_4608229_0 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 404.0
MMD1_k127_4608229_1 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000004702 102.0
MMD1_k127_4608229_2 - - - - 0.00000000000000000000002202 113.0
MMD1_k127_4608229_3 - - - - 0.00000001045 59.0
MMD1_k127_4621991_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001551 265.0
MMD1_k127_4621991_1 Kdo2-lipid A biosynthetic process K02517,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.0000000000000000000000000000000000000000000000000000000000000000594 233.0
MMD1_k127_4638257_0 protein kinase activity - - - 6.986e-194 636.0
MMD1_k127_4638257_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000003698 96.0
MMD1_k127_464126_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 608.0
MMD1_k127_464126_1 amino acid K03294,K13868 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 395.0
MMD1_k127_4643527_0 Belongs to the peptidase S16 family - - - 4.336e-265 839.0
MMD1_k127_4643527_1 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 505.0
MMD1_k127_4643527_2 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 373.0
MMD1_k127_4643527_3 carboxymethylenebutenolidase activity K01061,K07100 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005776 282.0
MMD1_k127_4643527_4 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000001555 216.0
MMD1_k127_4683919_0 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 316.0
MMD1_k127_4683919_1 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000001007 226.0
MMD1_k127_4683919_2 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.00000001832 64.0
MMD1_k127_468840_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 621.0
MMD1_k127_468840_1 - - - - 0.0000000008085 64.0
MMD1_k127_4724534_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 519.0
MMD1_k127_4724534_1 allantoinase K01466 GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 454.0
MMD1_k127_4724534_2 DNA-binding transcription factor activity K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000004607 66.0
MMD1_k127_4744501_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001586 281.0
MMD1_k127_4744507_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 359.0
MMD1_k127_4744507_1 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000006687 235.0
MMD1_k127_4744507_2 His Kinase A (phosphoacceptor) domain K07768 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016020,GO:0016310,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0051704,GO:0071704,GO:0071944,GO:1901564 2.7.13.3 0.0000003248 60.0
MMD1_k127_475331_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 378.0
MMD1_k127_475331_1 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000007364 232.0
MMD1_k127_475331_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000001398 223.0
MMD1_k127_475331_3 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000003666 228.0
MMD1_k127_4757702_0 cAMP biosynthetic process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 444.0
MMD1_k127_4770480_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 6.736e-213 685.0
MMD1_k127_4770480_1 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000247 177.0
MMD1_k127_4774658_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 8.227e-244 807.0
MMD1_k127_4774658_1 Viral (Superfamily 1) RNA helicase K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 517.0
MMD1_k127_4774658_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 383.0
MMD1_k127_4779366_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 437.0
MMD1_k127_4779366_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 296.0
MMD1_k127_4781881_0 oxidoreductase activity - - - 0.000000000000000000000001293 119.0
MMD1_k127_4781881_1 peptidyl-tyrosine sulfation - - - 0.000007434 53.0
MMD1_k127_4789524_0 PFAM glycosyl transferase family 39 K07264 - 2.4.2.43 0.0000000000000000000000000000000000000000000000000000000000000005862 239.0
MMD1_k127_4789524_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000001096 157.0
MMD1_k127_4789524_2 PFAM von Willebrand factor type A - - - 0.0000000000000003995 83.0
MMD1_k127_4803786_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 459.0
MMD1_k127_4803786_1 Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001329 266.0
MMD1_k127_4803786_2 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000005255 89.0
MMD1_k127_4803786_3 Cytochrome c - - - 0.000000003299 69.0
MMD1_k127_4809651_0 GXGXG motif K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 476.0
MMD1_k127_4809651_1 LysR substrate binding domain - - - 0.0000000000000000000000000000008646 130.0
MMD1_k127_4813767_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 6.391e-235 745.0
MMD1_k127_4813767_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 332.0
MMD1_k127_4813767_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000004003 229.0
MMD1_k127_4827990_0 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 469.0
MMD1_k127_4827990_1 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 479.0
MMD1_k127_4850898_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432 522.0
MMD1_k127_4850898_1 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000447 282.0
MMD1_k127_4850898_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000001947 113.0
MMD1_k127_4854375_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 510.0
MMD1_k127_4854375_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 340.0
MMD1_k127_4854375_2 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003144 235.0
MMD1_k127_4858489_0 - - - - 0.0004191 52.0
MMD1_k127_4865616_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1534.0
MMD1_k127_4865616_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 465.0
MMD1_k127_4865616_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 447.0
MMD1_k127_4865616_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 372.0
MMD1_k127_4865616_4 PFAM OsmC family protein K04063 - - 0.000000000000000000000000000000000000000000000000000007973 192.0
MMD1_k127_4865616_5 TQO small subunit DoxD K15977 - - 0.000000000000000000000000000000001572 132.0
MMD1_k127_4865616_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000406 124.0
MMD1_k127_4866025_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000001092 144.0
MMD1_k127_4866025_1 Regulatory protein, FmdB family - - - 0.000000000000001889 79.0
MMD1_k127_4866025_2 cAMP biosynthetic process - - - 0.00001355 48.0
MMD1_k127_4867230_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003384 240.0
MMD1_k127_4867230_1 Adenylate cyclase - - - 0.00000000000000000006098 102.0
MMD1_k127_4867230_2 histone H2A K63-linked ubiquitination - - - 0.00000000002124 76.0
MMD1_k127_4872753_0 PFAM peptidase M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004882 258.0
MMD1_k127_4872753_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000002325 132.0
MMD1_k127_4872753_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000009053 116.0
MMD1_k127_4872753_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000001435 54.0
MMD1_k127_4896722_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 606.0
MMD1_k127_4896722_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 585.0
MMD1_k127_4896722_10 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.0000000000000000000000000000001809 128.0
MMD1_k127_4896722_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000006376 115.0
MMD1_k127_4896722_12 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient K05580 - 1.6.5.3 0.0000000000000000000000001537 112.0
MMD1_k127_4896722_13 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000005456 112.0
MMD1_k127_4896722_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 469.0
MMD1_k127_4896722_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 372.0
MMD1_k127_4896722_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 330.0
MMD1_k127_4896722_5 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005469 271.0
MMD1_k127_4896722_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000006855 245.0
MMD1_k127_4896722_7 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000005862 182.0
MMD1_k127_4896722_8 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000003584 180.0
MMD1_k127_4896722_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.00000000000000000000000000000000000001048 158.0
MMD1_k127_4914871_0 choline dehydrogenase activity - - - 4.778e-279 865.0
MMD1_k127_4914871_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 292.0
MMD1_k127_4922970_0 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 3.916e-314 982.0
MMD1_k127_49326_0 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 7.179e-208 659.0
MMD1_k127_49326_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 411.0
MMD1_k127_49326_2 NmrA-like family K07118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 321.0
MMD1_k127_49326_3 - - - - 0.00000000000000000000000000000000000000000001415 168.0
MMD1_k127_49326_4 PFAM sigma-54 factor interaction domain-containing protein K00575,K12266 - 2.1.1.80 0.000000003954 59.0
MMD1_k127_4933371_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 315.0
MMD1_k127_4933371_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000388 226.0
MMD1_k127_4933371_2 MOSC domain - - - 0.000000000000000000000000001689 115.0
MMD1_k127_4933371_3 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.0000000004681 68.0
MMD1_k127_4935258_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 520.0
MMD1_k127_4935258_1 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001362 269.0
MMD1_k127_4935258_2 Glycosyltransferase like family 2 K09931 - - 0.00007901 46.0
MMD1_k127_4950928_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 497.0
MMD1_k127_4950928_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002991 271.0
MMD1_k127_4952323_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 295.0
MMD1_k127_4952323_1 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003035 277.0
MMD1_k127_4952323_2 RES - - - 0.00000000000000000000000000000000000000000000002872 174.0
MMD1_k127_4952323_3 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000009323 116.0
MMD1_k127_4952323_4 membrane - - - 0.000000000000000000000000009454 117.0
MMD1_k127_4978230_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 568.0
MMD1_k127_4978230_1 S-adenosylmethionine synthetase, C-terminal domain K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006995 535.0
MMD1_k127_4978230_2 Permease, YjgP YjgQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 339.0
MMD1_k127_4978230_3 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000007663 236.0
MMD1_k127_4978230_4 PFAM Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.00000000000000000000000000003103 128.0
MMD1_k127_4978230_5 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000002516 124.0
MMD1_k127_4991141_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 591.0
MMD1_k127_4991141_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001468 229.0
MMD1_k127_4991141_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000001999 198.0
MMD1_k127_4991141_3 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571,K01960 - 4.1.1.3,6.4.1.1 0.00000000000000000000000000000001227 132.0
MMD1_k127_4991141_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000001679 138.0
MMD1_k127_5021365_0 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 355.0
MMD1_k127_5021365_1 7TM-HD extracellular K07037 - - 0.0004357 50.0
MMD1_k127_5056399_0 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003028 284.0
MMD1_k127_5056399_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000002931 63.0
MMD1_k127_5056399_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000155 57.0
MMD1_k127_5061715_0 Involved in the tonB-independent uptake of proteins - - - 1.664e-198 647.0
MMD1_k127_5067213_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004469 261.0
MMD1_k127_5067213_2 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000003157 207.0
MMD1_k127_5067213_3 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000002487 172.0
MMD1_k127_5067213_4 Belongs to the BshC family K22136 - - 0.0000000000000000000000000002964 129.0
MMD1_k127_5069952_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1324.0
MMD1_k127_5069952_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000002251 203.0
MMD1_k127_5069952_2 Alkylmercury lyase - - - 0.000000000000000749 84.0
MMD1_k127_5069952_3 Alkylmercury lyase - - - 0.0000000008591 62.0
MMD1_k127_5108421_0 Type II/IV secretion system protein K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 316.0
MMD1_k127_5108421_1 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003326 290.0
MMD1_k127_5118611_0 acyl-CoA dehydrogenase K00248,K00249 - 1.3.8.1,1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 391.0
MMD1_k127_5118611_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 378.0
MMD1_k127_5118611_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0000166,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009507,GO:0009536,GO:0010035,GO:0010038,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017076,GO:0019866,GO:0030554,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0050897,GO:0055114,GO:0070469,GO:0097159,GO:0097367,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.8.1.4 0.000000000000000000005429 93.0
MMD1_k127_5118611_3 Pyruvate phosphate dikinase - - - 0.0004291 51.0
MMD1_k127_5119779_0 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000001403 194.0
MMD1_k127_5119779_1 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000001524 162.0
MMD1_k127_5119779_2 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000006062 153.0
MMD1_k127_5120643_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 519.0
MMD1_k127_5120643_1 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000019 257.0
MMD1_k127_5120643_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000008799 190.0
MMD1_k127_5120643_3 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000008402 114.0
MMD1_k127_5120643_4 Methyltransferase domain - - - 0.000000000059 72.0
MMD1_k127_5120643_5 Heat shock protein DnaJ domain protein K12132 - 2.7.11.1 0.000000007313 64.0
MMD1_k127_5120643_6 Alpha/beta hydrolase family - - - 0.00000001861 65.0
MMD1_k127_5125345_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 519.0
MMD1_k127_5125345_1 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 443.0
MMD1_k127_5125345_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 330.0
MMD1_k127_5125345_3 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 316.0
MMD1_k127_5125345_4 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 299.0
MMD1_k127_5125345_5 PAP2 superfamily - - - 0.0000000000000000000000000000000000000004447 164.0
MMD1_k127_5125345_6 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000001694 161.0
MMD1_k127_5125345_7 Elongator protein 3, MiaB family, Radical SAM K03644 - 2.8.1.8 0.0000000000000004294 90.0
MMD1_k127_5125345_8 Sporulation related domain - - - 0.0004357 50.0
MMD1_k127_5127238_0 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000000000000000000000000000000000000000000000649 217.0
MMD1_k127_5127238_1 helix_turn_helix, mercury resistance - - - 0.0000000000000000000164 100.0
MMD1_k127_5127238_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000001504 97.0
MMD1_k127_5127238_3 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.0004606 51.0
MMD1_k127_5127889_0 Protein of unknown function (DUF421) - - - 0.00000000000000000000008 107.0
MMD1_k127_5127889_1 - - - - 0.0000000000000005139 83.0
MMD1_k127_5127889_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.00000000000000571 85.0
MMD1_k127_5127889_3 UPF0391 membrane protein - - - 0.00007518 53.0
MMD1_k127_5130562_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.513e-197 634.0
MMD1_k127_5130562_1 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 469.0
MMD1_k127_5130562_2 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000002342 141.0
MMD1_k127_5130562_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000001117 76.0
MMD1_k127_5130562_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000001698 79.0
MMD1_k127_5135195_0 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.00000000000000000000000000000000000000000000000000000006096 225.0
MMD1_k127_5137948_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000004481 190.0
MMD1_k127_5137948_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000003527 179.0
MMD1_k127_5137948_2 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000007067 167.0
MMD1_k127_5137948_3 cell redox homeostasis - - - 0.00000000000000000000001375 108.0
MMD1_k127_5137948_5 nitrite reductase [NAD(P)H] activity K16937 - 1.8.5.2 0.0007066 46.0
MMD1_k127_5141890_0 L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000819 276.0
MMD1_k127_5141890_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000002661 205.0
MMD1_k127_5141890_2 EamA-like transporter family - - - 0.000000000000003447 76.0
MMD1_k127_5145448_0 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K00256 - 1.3.99.16 4.867e-213 672.0
MMD1_k127_5145448_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004951 256.0
MMD1_k127_5145448_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.00000000000000000000000000000002568 129.0
MMD1_k127_5145448_3 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000001094 115.0
MMD1_k127_5145448_4 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000000000000000000007658 112.0
MMD1_k127_5150404_0 oligopeptide transporter, OPT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 301.0
MMD1_k127_5150404_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000214 242.0
MMD1_k127_5150404_2 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000888 153.0
MMD1_k127_5150404_3 Glutaredoxin K03676 - - 0.000000003667 59.0
MMD1_k127_5160585_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 374.0
MMD1_k127_5160585_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000308 228.0
MMD1_k127_5160585_2 hydrolase of the alpha beta-hydrolase fold K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 - 0.0000000000000000000000009477 107.0
MMD1_k127_5160585_3 - - - - 0.000000005031 60.0
MMD1_k127_5161136_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 570.0
MMD1_k127_5161136_1 Serine phosphatase RsbU, regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 374.0
MMD1_k127_5161136_3 PFAM membrane protein of K08972 - - 0.0000000000000000000000000005433 117.0
MMD1_k127_5161136_4 - - - - 0.0000000000000000000000001242 111.0
MMD1_k127_5167958_0 Urocanase C-terminal domain K01712 - 4.2.1.49 1.472e-254 795.0
MMD1_k127_5167958_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 481.0
MMD1_k127_5167958_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001111 260.0
MMD1_k127_5176231_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 598.0
MMD1_k127_5176231_1 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 304.0
MMD1_k127_5176231_10 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000009502 60.0
MMD1_k127_5176231_11 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000002471 63.0
MMD1_k127_5176231_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000001056 61.0
MMD1_k127_5176231_13 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000001247 56.0
MMD1_k127_5176231_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 299.0
MMD1_k127_5176231_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004237 263.0
MMD1_k127_5176231_4 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000002379 233.0
MMD1_k127_5176231_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 0.00000000000000000000000000000001573 129.0
MMD1_k127_5176231_6 Polymer-forming cytoskeletal - - - 0.000000000000000000000000001182 117.0
MMD1_k127_5176231_7 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000001745 105.0
MMD1_k127_5176231_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000009083 101.0
MMD1_k127_5176231_9 Putative single-stranded nucleic acids-binding domain K06346 - - 0.000000000000000007708 92.0
MMD1_k127_5180138_0 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 345.0
MMD1_k127_5180138_1 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006609 254.0
MMD1_k127_5180138_2 TRANSCRIPTIONal - - - 0.000000000000000000000000000000000009673 137.0
MMD1_k127_5180138_3 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0003688 44.0
MMD1_k127_5182934_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 1.19e-200 651.0
MMD1_k127_5182934_1 Belongs to the glycosyl hydrolase 57 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 521.0
MMD1_k127_5182934_2 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 474.0
MMD1_k127_5182934_3 - - - - 0.000000000000000000000000000000000000000132 153.0
MMD1_k127_5182934_4 Protein of unknown function (DUF433) - - - 0.0000000000000000000000000009232 113.0
MMD1_k127_5194909_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000006708 244.0
MMD1_k127_5194909_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000001798 156.0
MMD1_k127_5194909_2 TonB-dependent receptor - - - 0.0008146 43.0
MMD1_k127_5196047_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000005069 161.0
MMD1_k127_5196047_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000001004 104.0
MMD1_k127_5197583_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 507.0
MMD1_k127_5197583_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000008475 235.0
MMD1_k127_5197583_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000211 157.0
MMD1_k127_5197583_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000008713 87.0
MMD1_k127_5201016_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 1.288e-256 805.0
MMD1_k127_5201016_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000002728 139.0
MMD1_k127_5205870_0 enzyme binding K00567,K07443 - 2.1.1.63 0.000000000000000000000000000009784 122.0
MMD1_k127_5205870_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.000000000001581 73.0
MMD1_k127_5205870_2 - - - - 0.000000000165 64.0
MMD1_k127_5205870_3 Bacterial membrane protein, YfhO - - - 0.0000004143 61.0
MMD1_k127_5206420_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 332.0
MMD1_k127_5206420_1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000026 184.0
MMD1_k127_5206420_2 Outer membrane protein (OmpH-like) K06142 - - 0.00000002884 63.0
MMD1_k127_5208514_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 389.0
MMD1_k127_5218629_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000001222 274.0
MMD1_k127_5218629_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000005019 257.0
MMD1_k127_5218629_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000007497 206.0
MMD1_k127_5218629_3 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000009825 149.0
MMD1_k127_5218629_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00009347 49.0
MMD1_k127_5220870_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 521.0
MMD1_k127_5220870_1 methyltransferase - - - 0.0000000000000000000000000000000000000000006795 166.0
MMD1_k127_5226331_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000003898 192.0
MMD1_k127_5226331_1 Putative porin - - - 0.0002914 53.0
MMD1_k127_523561_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 585.0
MMD1_k127_523561_1 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000003173 86.0
MMD1_k127_523561_2 Forkhead associated domain - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.000000000002008 76.0
MMD1_k127_523561_3 Alpha beta hydrolase - - - 0.000000000003677 75.0
MMD1_k127_5244813_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 479.0
MMD1_k127_5244813_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000002976 81.0
MMD1_k127_5254868_0 SMART Elongator protein 3 MiaB NifB - - - 1.767e-240 757.0
MMD1_k127_5254868_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000003715 227.0
MMD1_k127_5254868_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000007722 177.0
MMD1_k127_5266267_0 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 366.0
MMD1_k127_5266267_1 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002649 244.0
MMD1_k127_5266267_2 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000001128 205.0
MMD1_k127_5266267_3 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000006261 201.0
MMD1_k127_5266267_5 Tetratricopeptide repeat - - - 0.00000000000037 76.0
MMD1_k127_5266267_6 Thioredoxin-like - - - 0.00000001602 57.0
MMD1_k127_5266267_7 - - - - 0.00000002713 57.0
MMD1_k127_5280683_0 Dehydrogenase E1 component K11381,K21416 - 1.2.4.4 5.536e-281 889.0
MMD1_k127_5280683_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 380.0
MMD1_k127_5283096_0 - - - - 0.000000000000000000000000000009679 136.0
MMD1_k127_5283096_1 COG0457 FOG TPR repeat - - - 0.000007789 49.0
MMD1_k127_5283096_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0001425 55.0
MMD1_k127_5296691_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 1.024e-273 865.0
MMD1_k127_5296691_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 4.194e-230 728.0
MMD1_k127_5296691_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000001398 172.0
MMD1_k127_5296691_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000004801 118.0
MMD1_k127_5312375_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 382.0
MMD1_k127_5312375_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621,K21576,K21577 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.21.4.2,1.21.4.3,1.21.4.4,2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005153 336.0
MMD1_k127_5312375_2 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000001165 191.0
MMD1_k127_5312375_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000005951 188.0
MMD1_k127_5312375_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000001307 114.0
MMD1_k127_5312375_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000002972 99.0
MMD1_k127_5312375_6 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000004231 91.0
MMD1_k127_5328330_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 2.165e-221 697.0
MMD1_k127_5328330_1 Magnesium chelatase, subunit ChlI C-terminal K06400,K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005839 254.0
MMD1_k127_5330546_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 556.0
MMD1_k127_5330546_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 323.0
MMD1_k127_5347818_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 495.0
MMD1_k127_5347818_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 445.0
MMD1_k127_5347818_2 DJ-1/PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000008271 266.0
MMD1_k127_5347818_3 PFAM PRC-barrel domain protein - - - 0.00000000000000000000000000000000000000000000251 168.0
MMD1_k127_5347818_5 Rhodanese Homology Domain - - - 0.000001185 54.0
MMD1_k127_5355493_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006346 492.0
MMD1_k127_5355493_1 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.0005913 44.0
MMD1_k127_5367223_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 371.0
MMD1_k127_5367223_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 348.0
MMD1_k127_5367223_2 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 345.0
MMD1_k127_5367223_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000002699 194.0
MMD1_k127_5367223_4 MacB-like periplasmic core domain - - - 0.00000000001444 67.0
MMD1_k127_5367900_0 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000001549 146.0
MMD1_k127_5367900_1 Ami_3 K01448 - 3.5.1.28 0.0005308 53.0
MMD1_k127_5368507_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 580.0
MMD1_k127_5368507_1 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 346.0
MMD1_k127_5368507_2 GHMP kinase K00869,K07031 - 2.7.1.168,2.7.1.36 0.000000000000000000000000000000000000000000000000003981 193.0
MMD1_k127_53779_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 6.469e-219 711.0
MMD1_k127_5378813_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 362.0
MMD1_k127_5378813_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000191 230.0
MMD1_k127_5378813_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.00000000000000000000001037 115.0
MMD1_k127_538210_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1062.0
MMD1_k127_538210_1 photosystem II stabilization - - - 0.00000000000000000000000000000000003532 146.0
MMD1_k127_538210_2 - - - - 0.000000000000000000000003418 104.0
MMD1_k127_538210_3 DNA uptake protein and related DNA-binding K02237 - - 0.00000001758 65.0
MMD1_k127_5413351_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000145 142.0
MMD1_k127_5415071_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 474.0
MMD1_k127_5415071_1 Methyltransferase type 12 - - - 0.0000000000000000000000000000000000002921 157.0
MMD1_k127_5421032_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 316.0
MMD1_k127_5421032_1 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000004184 209.0
MMD1_k127_5423347_0 CoA carboxylase activity K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 470.0
MMD1_k127_5423347_1 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 343.0
MMD1_k127_5423347_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 306.0
MMD1_k127_5423347_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000001069 152.0
MMD1_k127_5423347_4 Biotin-requiring enzyme - - - 0.000000000000000002051 92.0
MMD1_k127_5444636_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 3.498e-312 975.0
MMD1_k127_5444636_1 Sortilin, neurotensin receptor 3, - - - 2.673e-194 623.0
MMD1_k127_5444636_2 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 446.0
MMD1_k127_5444636_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000001377 219.0
MMD1_k127_5444636_4 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000009376 214.0
MMD1_k127_5444636_5 GAF domain K08968 - 1.8.4.14 0.00000000000000000002403 108.0
MMD1_k127_5448410_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002583 261.0
MMD1_k127_5448410_1 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000289 156.0
MMD1_k127_5448640_0 4Fe-4S single cluster domain K06937 - - 3.742e-246 777.0
MMD1_k127_5448640_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000395 261.0
MMD1_k127_5448640_2 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000009104 222.0
MMD1_k127_5456369_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009262 314.0
MMD1_k127_5456369_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000008005 179.0
MMD1_k127_5470817_0 MacB-like periplasmic core domain - - - 4.538e-252 802.0
MMD1_k127_5470817_1 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000007719 254.0
MMD1_k127_5470817_2 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000006802 177.0
MMD1_k127_5470817_3 RNA recognition motif - - - 0.00000000000000000000000000008933 122.0
MMD1_k127_5470817_4 MerR, DNA binding K13639 - - 0.000000000000000000005832 100.0
MMD1_k127_5470817_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000001901 72.0
MMD1_k127_5473480_0 Isocitrate lyase family K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 580.0
MMD1_k127_5473480_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 567.0
MMD1_k127_5473480_10 Methyltransferase domain - - - 0.0002223 43.0
MMD1_k127_5473480_2 IrrE N-terminal-like domain K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 555.0
MMD1_k127_5473480_3 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 376.0
MMD1_k127_5473480_4 HpcH/HpaI aldolase/citrate lyase family K01630,K02510 - 4.1.2.20,4.1.2.52 0.0000000000000000000000000000000000000000002197 168.0
MMD1_k127_5473480_5 of the beta-lactamase K00784 - 3.1.26.11 0.00000000000000000000000000000002432 131.0
MMD1_k127_5473480_6 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000014 102.0
MMD1_k127_5473480_7 Redoxin - - - 0.00000000000000001768 88.0
MMD1_k127_5473480_8 Isocitrate lyase family K01637 - 4.1.3.1 0.000000000001688 74.0
MMD1_k127_5473480_9 Protein of unknown function (DUF4230) - - - 0.0000000009505 67.0
MMD1_k127_5479097_0 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 520.0
MMD1_k127_5479097_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000003713 151.0
MMD1_k127_5479097_2 Anti-sigma-K factor rskA - - - 0.00000000000000000000003351 109.0
MMD1_k127_5481140_0 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 299.0
MMD1_k127_5481140_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000003863 106.0
MMD1_k127_5481140_2 chaperone-mediated protein folding - - - 0.000000003758 65.0
MMD1_k127_5504473_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0 1071.0
MMD1_k127_5504473_1 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 605.0
MMD1_k127_5504473_2 ABC transporter K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 363.0
MMD1_k127_5504473_3 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 330.0
MMD1_k127_5504473_4 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004248 275.0
MMD1_k127_5504473_5 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000001011 209.0
MMD1_k127_5504473_6 - - - - 0.000000000000000000000000000000000000000000000000000001367 200.0
MMD1_k127_5504473_7 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000002916 138.0
MMD1_k127_5521504_0 Belongs to the BI1 family K06890,K19416 - - 0.0000000000000000000000000000000000000000000000000000000000004524 218.0
MMD1_k127_5521504_1 photosynthesis - - - 0.000000000000000000000000000000000000000000001198 169.0
MMD1_k127_5521504_2 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000000001572 128.0
MMD1_k127_552839_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 443.0
MMD1_k127_552839_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004863 268.0
MMD1_k127_552839_2 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.00000000000000002863 85.0
MMD1_k127_553826_0 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 317.0
MMD1_k127_553826_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000004259 189.0
MMD1_k127_553826_2 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000004718 115.0
MMD1_k127_5552752_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 363.0
MMD1_k127_5552752_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00002263 57.0
MMD1_k127_555809_0 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003751 276.0
MMD1_k127_555809_1 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005599 247.0
MMD1_k127_555809_2 Glycosyl transferase, family 2 - - - 0.000000001357 70.0
MMD1_k127_5573195_0 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000001862 211.0
MMD1_k127_5573195_1 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.00000000000000000000000000000001064 135.0
MMD1_k127_5584580_0 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000006332 243.0
MMD1_k127_5584580_1 Phenylacetate-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000000000006877 234.0
MMD1_k127_5584580_2 Uncharacterised protein family (UPF0158) - - - 0.0001281 50.0
MMD1_k127_5601339_0 COG1121 ABC-type Mn Zn transport systems ATPase component K02074 - - 0.0000000000000000000000000000000000000000000002007 182.0
MMD1_k127_5601339_1 ABC-type Mn2 Zn2 transport systems permease components K09816 - - 0.000000000000000000000000000000000000000001873 171.0
MMD1_k127_5601339_2 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.0000000000000002009 84.0
MMD1_k127_5601339_3 Belongs to the universal stress protein A family - - - 0.00000000001091 74.0
MMD1_k127_56254_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 4.702e-236 738.0
MMD1_k127_56254_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 534.0
MMD1_k127_56254_2 PFAM FAD linked oxidase domain protein K00104,K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 390.0
MMD1_k127_56254_3 Malate synthase K01638 - 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 288.0
MMD1_k127_5640155_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009072 327.0
MMD1_k127_5640155_1 Pyruvate phosphate dikinase - - - 0.000000000000000000000000000000000000000000000001091 183.0
MMD1_k127_5640155_2 type I secretion outer membrane protein, TolC K12340 - - 0.000000001244 70.0
MMD1_k127_5640155_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000002311 64.0
MMD1_k127_5643198_0 GXGXG motif K00265 - 1.4.1.13,1.4.1.14 2.384e-312 990.0
MMD1_k127_5643198_1 FAD dependent oxidoreductase K00109,K15736 - 1.1.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 372.0
MMD1_k127_5643198_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000001018 255.0
MMD1_k127_5652064_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 1.266e-285 911.0
MMD1_k127_5652064_1 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000004603 88.0
MMD1_k127_5666035_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000002952 184.0
MMD1_k127_5666035_1 regulator - - - 0.0000000000000000000000000000000000000126 147.0
MMD1_k127_5666035_2 - - - - 0.0000000000000000000000000000000000001886 149.0
MMD1_k127_5666035_3 transcriptional regulator - - - 0.00000000000000000001379 98.0
MMD1_k127_5682731_0 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 405.0
MMD1_k127_5682731_1 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 332.0
MMD1_k127_5682731_2 Penicillinase repressor - - - 0.00000000000000000000000000000000000000000006757 163.0
MMD1_k127_5682731_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000002249 59.0
MMD1_k127_5708942_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 451.0
MMD1_k127_5708942_1 Mandelate racemase muconate lactonizing enzyme K02549,K19802 - 4.2.1.113,5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 403.0
MMD1_k127_5708942_2 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000187 211.0
MMD1_k127_5713219_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 310.0
MMD1_k127_5713219_1 maltose O-acetyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009081 244.0
MMD1_k127_5713219_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000001061 90.0
MMD1_k127_5713219_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000003419 74.0
MMD1_k127_5715773_0 Probably functions as a manganese efflux pump - - - 0.00000000005305 75.0
MMD1_k127_5727280_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 323.0
MMD1_k127_5727280_1 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 298.0
MMD1_k127_5727280_2 PFAM Roadblock LC7 family protein - - - 0.000000000000000000000000000000000000000000000000000000000883 205.0
MMD1_k127_5727280_3 - - - - 0.0000000000000000000000000000000000000000000003165 173.0
MMD1_k127_5727280_4 SMART Metal-dependent phosphohydrolase, HD region K07141 - 2.7.7.76 0.00000000000000000000000000008483 126.0
MMD1_k127_5727280_5 Transcriptional regulator - - - 0.0000000000000003431 85.0
MMD1_k127_5727280_6 - - - - 0.0000000151 61.0
MMD1_k127_5731970_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.914e-261 834.0
MMD1_k127_5731970_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 335.0
MMD1_k127_5731970_2 thiolester hydrolase activity K06889 - - 0.0002299 47.0
MMD1_k127_5744472_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 421.0
MMD1_k127_5760369_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 330.0
MMD1_k127_5765800_0 Coenzyme A transferase K01029 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 312.0
MMD1_k127_5765800_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.000000000000000000000000000000000000000000000000232 197.0
MMD1_k127_5765800_2 Acyl CoA acetate 3-ketoacid CoA transferase K01028 - 2.8.3.5 0.00000000000000000000000000000000002972 136.0
MMD1_k127_5782921_0 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
MMD1_k127_5782921_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 291.0
MMD1_k127_5782921_2 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000004822 108.0
MMD1_k127_5798394_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 424.0
MMD1_k127_5798394_1 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000001094 217.0
MMD1_k127_5798394_2 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000002252 145.0
MMD1_k127_5798394_3 Bacterial-like globin K06886 - - 0.000000000000000000000003252 105.0
MMD1_k127_5807614_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009724 261.0
MMD1_k127_5807614_1 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000004649 234.0
MMD1_k127_5825741_0 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 6.999e-273 872.0
MMD1_k127_5825741_1 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 352.0
MMD1_k127_5825741_2 Amidohydrolase family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000001586 224.0
MMD1_k127_5825741_3 EVE domain - - - 0.00000000000000000000000000000000000000146 152.0
MMD1_k127_583935_0 UDP-glucose 4-epimerase activity K01784,K17947 - 5.1.3.2,5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 290.0
MMD1_k127_583935_1 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000002369 192.0
MMD1_k127_583935_2 Histidine kinase - - - 0.000000000000000000000000000000000000000001684 171.0
MMD1_k127_583935_3 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000001564 154.0
MMD1_k127_583935_4 peptidyl-tyrosine sulfation - - - 0.000003635 50.0
MMD1_k127_583935_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00009075 51.0
MMD1_k127_626193_0 acetyltransferase - - - 0.000000000000000000000000000000000000000000000004187 177.0
MMD1_k127_626193_1 DinB family - - - 0.00000000000000000000000000000000000000000000007332 173.0
MMD1_k127_626193_2 DinB family - - - 0.000000000000000000000000000000001635 138.0
MMD1_k127_626193_3 - - - - 0.00000000000000000000002174 111.0
MMD1_k127_626193_4 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000337 83.0
MMD1_k127_636512_0 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 355.0
MMD1_k127_636512_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000001497 127.0
MMD1_k127_636512_2 Adenylate cyclase - - - 0.000005658 49.0
MMD1_k127_64224_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 387.0
MMD1_k127_64224_1 nuclease activity - - - 0.000000000000000000000000000001644 125.0
MMD1_k127_64224_2 ECF sigma factor K03088 - - 0.0000000000001324 82.0
MMD1_k127_64224_3 ATP-independent chaperone mediated protein folding K06006 - - 0.00000006682 60.0
MMD1_k127_64422_0 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.00000000000000000000000000000000003469 146.0
MMD1_k127_64422_1 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000002086 128.0
MMD1_k127_64422_2 thiolester hydrolase activity K17362 - - 0.0000000000000000008015 92.0
MMD1_k127_64422_3 NYN domain - - - 0.0000000041 66.0
MMD1_k127_653919_0 - - - - 0.000000000000000000000000000000000002722 156.0
MMD1_k127_653919_1 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.000000001154 66.0
MMD1_k127_653919_2 Bacterial membrane protein, YfhO - - - 0.000003021 54.0
MMD1_k127_664692_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 617.0
MMD1_k127_664692_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 390.0
MMD1_k127_672807_0 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 462.0
MMD1_k127_672807_1 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000002128 243.0
MMD1_k127_67910_0 surface antigen variable number - - - 0.0000000000000000000000000000000000000000000000000000000000000000001311 261.0
MMD1_k127_690371_0 Aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 406.0
MMD1_k127_70690_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000002249 248.0
MMD1_k127_70690_1 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000007191 168.0
MMD1_k127_715696_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000003432 234.0
MMD1_k127_715696_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000001811 221.0
MMD1_k127_731159_0 AcrB/AcrD/AcrF family - - - 8.494e-260 820.0
MMD1_k127_731159_1 Sulfurtransferase - - - 0.0000000000000005712 83.0
MMD1_k127_731863_0 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000002381 218.0
MMD1_k127_731863_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000001066 187.0
MMD1_k127_731863_2 lipid A biosynthesis K02517 - 2.3.1.241 0.0000000002574 64.0
MMD1_k127_732526_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 404.0
MMD1_k127_732526_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 370.0
MMD1_k127_732526_2 COG3842 ABC-type spermidine putrescine transport systems, ATPase components K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000004678 171.0
MMD1_k127_735494_0 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000002612 138.0
MMD1_k127_735494_1 Psort location CytoplasmicMembrane, score - - - 0.0000000000009601 81.0
MMD1_k127_735494_2 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.00001947 58.0
MMD1_k127_745916_0 addiction module killer protein - - - 0.00000000000000000000000007925 108.0
MMD1_k127_745916_1 CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000006871 98.0
MMD1_k127_753495_0 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001794 211.0
MMD1_k127_753495_1 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000008994 129.0
MMD1_k127_753495_2 amidohydrolase - - - 0.0000000000000000000000000000001661 139.0
MMD1_k127_753495_3 Transglutaminase-like superfamily - - - 0.0000000000000000000000000006963 127.0
MMD1_k127_753495_4 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000001924 101.0
MMD1_k127_755344_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 421.0
MMD1_k127_755344_1 Amino-transferase class IV K00824,K00826 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21,2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000785 238.0
MMD1_k127_755344_2 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000008182 241.0
MMD1_k127_755344_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000001154 183.0
MMD1_k127_755344_4 gamma-glutamyl-gamma-aminobutyrate hydrolase activity K07010 - - 0.0000000000000000000000000000000000000001395 163.0
MMD1_k127_755344_5 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000243 107.0
MMD1_k127_755344_6 beta-lactamase domain protein K05555 - - 0.0000000000000000000875 104.0
MMD1_k127_755344_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000007587 74.0
MMD1_k127_75708_0 Peptidase M15 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006303 273.0
MMD1_k127_75708_1 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000004678 184.0
MMD1_k127_75708_2 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000002429 156.0
MMD1_k127_75708_3 L,D-transpeptidase catalytic domain - - - 0.00000000167 69.0
MMD1_k127_762531_0 PFAM Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 571.0
MMD1_k127_762531_1 Type ii and iii secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004885 304.0
MMD1_k127_762531_2 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000002441 167.0
MMD1_k127_762531_3 Pilus assembly protein K02662 - - 0.0000000000005236 80.0
MMD1_k127_762531_4 Pfam:N_methyl_2 K02456 - - 0.0000000004549 63.0
MMD1_k127_762531_5 PFAM Fimbrial assembly family protein K02663 - - 0.0000535 54.0
MMD1_k127_777059_0 Sigma-54 interaction domain K15836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 459.0
MMD1_k127_777059_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000008249 243.0
MMD1_k127_777059_2 - - - - 0.00003359 51.0
MMD1_k127_777141_0 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 555.0
MMD1_k127_777141_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 476.0
MMD1_k127_777141_2 C-terminal AAA-associated domain K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 388.0
MMD1_k127_777141_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000005863 227.0
MMD1_k127_777141_4 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.000000000000000000000000000000000000000000000002819 186.0
MMD1_k127_778298_0 FeS assembly SUF system protein SufT - - - 0.0000000000000000000000000000000000000000000000000000003283 199.0
MMD1_k127_778298_1 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000000009363 173.0
MMD1_k127_778298_2 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000002755 170.0
MMD1_k127_778298_3 ECF sigma factor - - - 0.0000000000003766 71.0
MMD1_k127_778418_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.734e-208 687.0
MMD1_k127_778418_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000001427 72.0
MMD1_k127_781198_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003511 283.0
MMD1_k127_781198_1 Peptide nickel ABC transporter, permease K02034 - - 0.00000000000000000000000000000000000000000000000000000000001585 229.0
MMD1_k127_781198_2 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000009356 192.0
MMD1_k127_781198_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000001618 180.0
MMD1_k127_788481_0 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 399.0
MMD1_k127_788481_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 288.0
MMD1_k127_788481_2 Beta-lactamase superfamily domain - - - 0.0000000000000000017 93.0
MMD1_k127_788481_3 Binding-protein-dependent transport system inner membrane component K02050,K15577 - - 0.00005459 55.0
MMD1_k127_789472_0 Belongs to the HypD family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 511.0
MMD1_k127_789472_1 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 473.0
MMD1_k127_789472_10 Diguanylate cyclase - - - 0.000000003869 62.0
MMD1_k127_789472_11 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.000006637 59.0
MMD1_k127_789472_2 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 421.0
MMD1_k127_789472_3 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 398.0
MMD1_k127_789472_4 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 368.0
MMD1_k127_789472_5 Cytochrome c554 and c-prime K03620 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 375.0
MMD1_k127_789472_6 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00000000000000000000000000000000000000001505 158.0
MMD1_k127_789472_7 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000004658 162.0
MMD1_k127_789472_8 Biogenesis protein - - - 0.00000000000000000000000001879 124.0
MMD1_k127_789472_9 carbon dioxide binding K04653,K04654 - - 0.000000000000000000000001832 118.0
MMD1_k127_794455_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 313.0
MMD1_k127_794455_1 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.0000000000000000000000000000000001885 148.0
MMD1_k127_794455_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000001446 64.0
MMD1_k127_797386_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 417.0
MMD1_k127_797386_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 324.0
MMD1_k127_797386_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 289.0
MMD1_k127_809062_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 362.0
MMD1_k127_809062_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000001795 113.0
MMD1_k127_809062_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0000003737 63.0
MMD1_k127_809062_3 Polymer-forming cytoskeletal - - - 0.00002064 51.0
MMD1_k127_81653_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006324 295.0
MMD1_k127_81653_1 phosphorelay signal transduction system - - - 0.0000000000000000000001929 113.0
MMD1_k127_81653_2 Carboxymuconolactone decarboxylase family - - - 0.00000000000000005537 81.0
MMD1_k127_816905_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 398.0
MMD1_k127_816905_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000002663 218.0
MMD1_k127_816905_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000001496 136.0
MMD1_k127_817281_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.535e-195 619.0
MMD1_k127_817281_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 338.0
MMD1_k127_817281_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000006914 236.0
MMD1_k127_817281_3 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000117 185.0
MMD1_k127_817281_4 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000001368 178.0
MMD1_k127_817281_5 - - - - 0.0000000000000000000000000000000005349 139.0
MMD1_k127_817281_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000149 87.0
MMD1_k127_817281_7 Transcriptional regulator - - - 0.000000000001271 72.0
MMD1_k127_8197_0 ADP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 609.0
MMD1_k127_8197_1 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 316.0
MMD1_k127_8197_2 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000001581 142.0
MMD1_k127_821320_0 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000002471 231.0
MMD1_k127_821320_1 - - - - 0.000000000000000000000000001081 125.0
MMD1_k127_821320_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000563 112.0
MMD1_k127_821320_3 Domain of unknown function (DUF4115) - - - 0.0000000000000000001776 99.0
MMD1_k127_821320_4 - - - - 0.00000000000000139 89.0
MMD1_k127_821320_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0016020,GO:0019222,GO:0030312,GO:0040007,GO:0043388,GO:0044093,GO:0044464,GO:0050789,GO:0051098,GO:0051099,GO:0051101,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:2000677,GO:2000679 - 0.0000000001399 70.0
MMD1_k127_822135_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.854e-232 735.0
MMD1_k127_822135_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 301.0
MMD1_k127_822135_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000007621 227.0
MMD1_k127_822135_3 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000121 106.0
MMD1_k127_822135_4 Salt-Induced Outer Membrane Protein K07283 - - 0.000000000000007932 82.0
MMD1_k127_822135_5 Belongs to the FPP GGPP synthase family K05355 GO:0000010,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009108,GO:0009987,GO:0010142,GO:0016020,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032476,GO:0032991,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045337,GO:0045338,GO:0051186,GO:0051188,GO:0071704,GO:0090407,GO:1901576,GO:1901661,GO:1901663,GO:1902494,GO:1902767,GO:1990234 2.5.1.82,2.5.1.83 0.00001506 49.0
MMD1_k127_822135_6 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain K05989 - 3.2.1.40 0.0001122 52.0
MMD1_k127_829247_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 293.0
MMD1_k127_829247_1 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003337 255.0
MMD1_k127_837995_0 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000000000000001967 138.0
MMD1_k127_837995_1 chaperone-mediated protein folding - - - 0.00000000001006 79.0
MMD1_k127_861933_0 Tetratricopeptide repeat - - - 2.937e-198 643.0
MMD1_k127_861933_1 cheY-homologous receiver domain - - - 0.000000000000000000000001234 109.0
MMD1_k127_864266_0 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000003144 169.0
MMD1_k127_864266_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000432 104.0
MMD1_k127_864266_2 CHRD domain - - - 0.00000000000000000003749 104.0
MMD1_k127_864266_3 - - - - 0.00000001261 68.0
MMD1_k127_866065_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000407 231.0
MMD1_k127_866065_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000002459 164.0
MMD1_k127_866065_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000002928 128.0
MMD1_k127_876949_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 2.234e-252 809.0
MMD1_k127_876949_1 RecX family K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000001761 67.0
MMD1_k127_877786_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 525.0
MMD1_k127_877786_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 377.0
MMD1_k127_877786_2 PFAM ABC transporter related K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 302.0
MMD1_k127_877786_3 RNA polymerase sigma-54 factor K03092 - - 0.000000000000000000000009693 107.0
MMD1_k127_877786_4 lipopolysaccharide transport K09774 - - 0.000000000002234 82.0
MMD1_k127_885361_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000001232 227.0
MMD1_k127_885361_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000008503 154.0
MMD1_k127_885361_2 membrane-bound metal-dependent K07038 - - 0.000000000000000000000000003251 124.0
MMD1_k127_885361_3 deaminase K01493 - 3.5.4.12 0.0000000000000000000000922 98.0
MMD1_k127_885361_4 response regulator - - - 0.00000000000000009895 93.0
MMD1_k127_887466_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 370.0
MMD1_k127_89073_0 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001072 273.0
MMD1_k127_89073_1 ABC transporter K05847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005059 266.0
MMD1_k127_89073_2 PFAM Binding-protein-dependent transport system inner membrane component K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000001663 247.0
MMD1_k127_89073_3 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 - - 0.000002568 59.0
MMD1_k127_898091_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 627.0
MMD1_k127_898091_1 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 503.0
MMD1_k127_898091_2 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 465.0
MMD1_k127_898091_3 PFAM Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 379.0
MMD1_k127_898091_4 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 338.0
MMD1_k127_898091_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009078 321.0
MMD1_k127_898091_6 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000001934 232.0
MMD1_k127_898091_7 nickel cation binding K04651 - - 0.000000000000001286 85.0
MMD1_k127_906852_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001171 245.0
MMD1_k127_906852_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000006506 231.0
MMD1_k127_906852_2 PFAM regulatory protein, MerR - - - 0.00000000000000003305 87.0
MMD1_k127_914273_0 protein-disulfide reductase activity K04084,K06196 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 364.0
MMD1_k127_914273_1 - - - - 0.000000000000000000000000000000000000001235 154.0
MMD1_k127_914273_2 Protein of unknown function, DUF255 - - - 0.000006739 58.0
MMD1_k127_916224_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 372.0
MMD1_k127_916224_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 336.0
MMD1_k127_928207_0 diguanylate cyclase - - - 0.000000000000000000000000000003543 134.0
MMD1_k127_928207_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000264 94.0
MMD1_k127_928207_2 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000001897 92.0
MMD1_k127_937830_0 malic enzyme K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 3.307e-277 886.0
MMD1_k127_937830_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 584.0
MMD1_k127_937830_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 329.0
MMD1_k127_947683_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 342.0
MMD1_k127_947683_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000857 274.0
MMD1_k127_947683_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000003765 176.0
MMD1_k127_947683_3 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000274 104.0
MMD1_k127_947683_4 - - - - 0.00005007 50.0
MMD1_k127_949499_0 Required for chromosome condensation and partitioning K03529 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 393.0
MMD1_k127_949499_1 domain protein - - - 0.00000000000000000008838 104.0
MMD1_k127_949499_2 Belongs to the 'phage' integrase family - - - 0.000000000000006514 80.0
MMD1_k127_949499_3 COG3209 Rhs family protein - - - 0.000000000001013 81.0
MMD1_k127_95208_0 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001872 241.0
MMD1_k127_95208_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000002981 59.0
MMD1_k127_96096_0 peptidyl-prolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000009618 112.0
MMD1_k127_96096_1 - - - - 0.000000000000000003031 97.0
MMD1_k127_96096_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00002615 58.0
MMD1_k127_970242_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000001774 164.0
MMD1_k127_970242_1 Ami_3 K01448 - 3.5.1.28 0.000001146 56.0
MMD1_k127_970242_2 Bacterial membrane protein YfhO - - - 0.0000088 59.0
MMD1_k127_970242_3 Bacterial membrane protein YfhO - - - 0.0001068 55.0
MMD1_k127_970698_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 1.25e-259 812.0
MMD1_k127_970698_1 aspartate--ammonia ligase K01914 GO:0003674,GO:0003824,GO:0004071,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019752,GO:0032787,GO:0033554,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 432.0
MMD1_k127_970698_2 - - - - 0.000000000000000000000000000000000000000007922 158.0
MMD1_k127_970698_3 Nitrous oxide-stimulated promoter - - - 0.00000000000000000000000000000000206 134.0
MMD1_k127_982821_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 364.0
MMD1_k127_982821_1 DNA-templated transcription, initiation K03088,K07263 - - 0.00000000000000000000000000000000000000000008929 167.0
MMD1_k127_982821_2 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000002506 162.0
MMD1_k127_982821_4 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000009335 122.0
MMD1_k127_982821_5 Histidine phosphatase superfamily (branch 1) - - - 0.00001187 53.0
MMD1_k127_983920_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000431 190.0
MMD1_k127_983920_1 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000007707 192.0
MMD1_k127_983920_2 Protein of unknown function (DUF421) - - - 0.000000000000000000000002681 114.0
MMD1_k127_987534_0 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 589.0
MMD1_k127_987534_1 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 299.0
MMD1_k127_987534_2 Cytochrome c K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001349 289.0
MMD1_k127_987534_3 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.000000000000000000000000000000000000005111 157.0
MMD1_k127_987534_4 to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000004823 132.0
MMD1_k127_997980_0 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 465.0
MMD1_k127_997980_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 426.0