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Overview

ID MAG02343
Name MMD1_bin.24
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Anaerolineales
Family E44-bin32
Genus MGOM01
Species
Assembly information
Completeness (%) 68.45
Contamination (%) 1.44
GC content (%) 67.0
N50 (bp) 4,576
Genome size (bp) 2,132,777

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2057

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1033772_0 ABC transporter K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 443.0
MMD1_k127_1036727_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000004061 108.0
MMD1_k127_1036727_1 Two component transcriptional regulator, winged helix family - - - 0.00000000000000007747 81.0
MMD1_k127_1036727_2 PFAM Propeptide, PepSY amd peptidase M4 - - - 0.00000000003843 73.0
MMD1_k127_106042_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 302.0
MMD1_k127_106042_1 Homeodomain-like domain - - - 0.000000000000000000000000000000000000000000000000000000002613 203.0
MMD1_k127_106042_2 Transposase - - - 0.00000000000000000000000000000000000000000000000000001995 207.0
MMD1_k127_1061455_0 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 403.0
MMD1_k127_1061455_1 N-4 methylation of cytosine K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 396.0
MMD1_k127_1061455_2 LysM domain K12204 - - 0.00000004852 65.0
MMD1_k127_1062942_0 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 349.0
MMD1_k127_1062942_1 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.0000000000000000000000000000000000000000000000000000000000000000000003584 260.0
MMD1_k127_1062942_2 PFAM Short-chain dehydrogenase reductase SDR K00046,K00065 - 1.1.1.127,1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000002354 246.0
MMD1_k127_1062942_3 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000001241 242.0
MMD1_k127_1062942_4 Periplasmic binding protein domain K10439 - - 0.00000000000000000000000000000000000000000000000000000000002266 222.0
MMD1_k127_1062942_5 FCD - - - 0.00000000000000000000000000000000000000000000005316 179.0
MMD1_k127_1062942_6 ATPases associated with a variety of cellular activities K02056,K10441 - 3.6.3.17 0.00000000000000000000000000000000004542 139.0
MMD1_k127_1063147_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 550.0
MMD1_k127_1063147_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005015 270.0
MMD1_k127_1068224_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 481.0
MMD1_k127_1068224_1 NAD-dependent epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000664 240.0
MMD1_k127_1068224_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000002642 190.0
MMD1_k127_1072852_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 430.0
MMD1_k127_1072852_1 acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000003966 124.0
MMD1_k127_1072852_2 acetyltransferase - - - 0.0000000000000000000005473 96.0
MMD1_k127_1072852_3 NfeD-like C-terminal, partner-binding K07403 - - 0.000000001835 66.0
MMD1_k127_1097331_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 323.0
MMD1_k127_1097331_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000001047 148.0
MMD1_k127_1097331_2 sh3 domain protein K01448 - 3.5.1.28 0.0000000000000000000000000000000000007418 149.0
MMD1_k127_1097331_3 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000006491 141.0
MMD1_k127_1097331_4 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000214 128.0
MMD1_k127_1097331_5 transcriptional regulator - - - 0.0000000000000009338 85.0
MMD1_k127_1097331_6 - - - - 0.000001676 59.0
MMD1_k127_1112001_0 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 314.0
MMD1_k127_1112001_1 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005109 277.0
MMD1_k127_1112001_2 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000001384 228.0
MMD1_k127_1112001_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000006373 142.0
MMD1_k127_1123587_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007856 288.0
MMD1_k127_1136751_0 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008755 275.0
MMD1_k127_1136751_1 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005041 243.0
MMD1_k127_1136751_2 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003197 237.0
MMD1_k127_1136751_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000003005 220.0
MMD1_k127_1136751_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000005354 189.0
MMD1_k127_1136751_5 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000001764 142.0
MMD1_k127_1136751_6 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000000001641 124.0
MMD1_k127_1136751_7 YGGT family K02221 - - 0.000000002311 61.0
MMD1_k127_1164490_0 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000005969 249.0
MMD1_k127_1166478_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000001551 187.0
MMD1_k127_1166478_1 DDE superfamily endonuclease - - - 0.000000000000002679 81.0
MMD1_k127_1166478_2 Outer membrane efflux protein - - - 0.0000000000000463 80.0
MMD1_k127_1176564_0 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 458.0
MMD1_k127_1176564_1 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 325.0
MMD1_k127_1190369_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 524.0
MMD1_k127_1190369_1 Putative peptidoglycan binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 306.0
MMD1_k127_1190369_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 297.0
MMD1_k127_1190369_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000285 262.0
MMD1_k127_1192272_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 533.0
MMD1_k127_1192272_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000002583 232.0
MMD1_k127_1192272_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000002573 224.0
MMD1_k127_1192272_3 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000002082 168.0
MMD1_k127_1192272_4 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000006045 76.0
MMD1_k127_1200562_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 3.493e-242 764.0
MMD1_k127_1200562_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 452.0
MMD1_k127_1200562_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000001168 207.0
MMD1_k127_1200562_3 FCD domain - - - 0.000000000000000000000000000000004246 131.0
MMD1_k127_1205665_0 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000000000001883 208.0
MMD1_k127_1205665_1 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000000000000000001239 219.0
MMD1_k127_1205665_2 AI-2E family transporter - - - 0.00000000000000000000000000000000002374 143.0
MMD1_k127_1205665_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000002731 111.0
MMD1_k127_1205665_4 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.00002999 51.0
MMD1_k127_1215275_0 Glycosyl transferase, family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 326.0
MMD1_k127_1215275_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002084 290.0
MMD1_k127_1222579_0 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000001029 215.0
MMD1_k127_1222579_1 - - - - 0.000000000000000000000000000000000000000000008326 174.0
MMD1_k127_1222579_2 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000001421 125.0
MMD1_k127_1227572_0 YqcI/YcgG family - - - 0.0000000000000000000000000000000000000000000000008427 194.0
MMD1_k127_1227572_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000006631 91.0
MMD1_k127_1227572_2 Ankyrin repeats (many copies) K06867 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464 - 0.00000002203 67.0
MMD1_k127_1227572_3 alpha-L-rhamnosidase - - - 0.0002039 47.0
MMD1_k127_1243748_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 1.036e-251 783.0
MMD1_k127_1243748_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 493.0
MMD1_k127_1243748_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338,K03615 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002162 285.0
MMD1_k127_1243748_3 - - - - 0.0000000000000000000000002371 109.0
MMD1_k127_1244_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 528.0
MMD1_k127_1244_1 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 383.0
MMD1_k127_1244_2 ABC transporter K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 307.0
MMD1_k127_1244_3 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000000000006361 217.0
MMD1_k127_1244_4 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000001396 216.0
MMD1_k127_1244_5 PFAM regulatory protein, ArsR K03892 - - 0.00000000000000000000005259 103.0
MMD1_k127_1244_6 Predicted permease K07089 - - 0.00000098 55.0
MMD1_k127_1244_7 PDGLE domain K02009 - - 0.00002815 49.0
MMD1_k127_1244079_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.114e-225 730.0
MMD1_k127_1259621_0 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002644 263.0
MMD1_k127_1259621_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000117 153.0
MMD1_k127_126189_0 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009259 511.0
MMD1_k127_126189_1 peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 483.0
MMD1_k127_126189_2 Cys/Met metabolism PLP-dependent enzyme K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 396.0
MMD1_k127_126189_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 349.0
MMD1_k127_126189_4 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 312.0
MMD1_k127_126189_5 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003814 263.0
MMD1_k127_126189_6 chromosome segregation K03497 - - 0.000000000000000000000000000954 127.0
MMD1_k127_1279902_0 amino acid transport K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 374.0
MMD1_k127_1279902_1 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 326.0
MMD1_k127_1279902_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000004843 258.0
MMD1_k127_1279902_3 Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000007746 192.0
MMD1_k127_1279902_4 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K09971 - - 0.00000000000000001207 86.0
MMD1_k127_12865_0 Resolvase K06400 - - 6.411e-194 626.0
MMD1_k127_12865_1 Transposase, Mutator family - - - 0.0000001023 62.0
MMD1_k127_1301515_0 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 450.0
MMD1_k127_1301515_1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K11540 GO:0000050,GO:0000166,GO:0002119,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009653,GO:0009791,GO:0009887,GO:0009987,GO:0016053,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019627,GO:0019752,GO:0019856,GO:0022612,GO:0030554,GO:0031406,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035295,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046394,GO:0046483,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0055086,GO:0055123,GO:0060465,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 0.0000000000000000000000000002838 117.0
MMD1_k127_1301515_2 Hydrogenase maturation protease K03605 - - 0.00000000000000000003247 102.0
MMD1_k127_1301515_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000005727 94.0
MMD1_k127_1302654_0 FAD linked oxidases, C-terminal domain K00102,K00803 - 1.1.2.4,2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 368.0
MMD1_k127_1335612_1 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.00000000000000000000000000000000000000007655 153.0
MMD1_k127_1338353_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 405.0
MMD1_k127_1338353_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 377.0
MMD1_k127_1338353_3 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000003462 258.0
MMD1_k127_1338353_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000002091 192.0
MMD1_k127_1338353_5 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000002016 170.0
MMD1_k127_1338353_6 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000005021 142.0
MMD1_k127_1338353_7 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000001297 64.0
MMD1_k127_1352446_0 PFAM peptidase M20 - - - 1.471e-198 630.0
MMD1_k127_1352446_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 536.0
MMD1_k127_1352446_10 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000007799 91.0
MMD1_k127_1352446_2 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 329.0
MMD1_k127_1352446_3 4-hydroxy-2-oxoglutarate aldolase K18123 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006081,GO:0006082,GO:0006090,GO:0006520,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008700,GO:0009056,GO:0009058,GO:0009063,GO:0009436,GO:0009987,GO:0016053,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0016833,GO:0019470,GO:0019471,GO:0019752,GO:0031974,GO:0032787,GO:0033609,GO:0042219,GO:0042802,GO:0042803,GO:0042866,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046185,GO:0046394,GO:0046395,GO:0046487,GO:0046983,GO:0070013,GO:0071704,GO:0072329,GO:0072330,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606 4.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 321.0
MMD1_k127_1352446_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000003823 267.0
MMD1_k127_1352446_5 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005417 271.0
MMD1_k127_1352446_6 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000001754 213.0
MMD1_k127_1352446_7 Class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000004302 174.0
MMD1_k127_1352446_8 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.000000000000000000000000000000005134 137.0
MMD1_k127_1352446_9 Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000001191 98.0
MMD1_k127_1354329_0 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001674 273.0
MMD1_k127_1354329_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000004471 206.0
MMD1_k127_1363447_0 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 316.0
MMD1_k127_1363447_1 Belongs to the BI1 family K06890 - - 0.0000000000000000000000000000000000000000000000002299 184.0
MMD1_k127_1363447_2 ferredoxin-NADP+ reductase activity - - - 0.0000000000008281 70.0
MMD1_k127_1382078_0 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003559 266.0
MMD1_k127_1382078_1 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000001393 174.0
MMD1_k127_1382078_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000006453 129.0
MMD1_k127_1382078_3 Ribosomal protein S21 K02970 - - 0.0000000000000000000004288 96.0
MMD1_k127_1382078_4 Phosphoribosyl transferase domain K07101 - - 0.00000000006224 63.0
MMD1_k127_1382078_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000002602 49.0
MMD1_k127_1400066_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 581.0
MMD1_k127_1400066_1 PFAM IstB domain protein ATP-binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 520.0
MMD1_k127_1400066_2 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000006298 171.0
MMD1_k127_1400066_3 TIGRFAM primosome, DnaD subunit - - - 0.000000000000000000000000000000000000001281 161.0
MMD1_k127_143186_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 357.0
MMD1_k127_143186_1 Histidine kinase HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000006489 171.0
MMD1_k127_143186_2 Domain of unknown function (DUF4872) - - - 0.000000000000000000000000000000000003546 152.0
MMD1_k127_145682_0 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 459.0
MMD1_k127_145682_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 464.0
MMD1_k127_145682_2 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 415.0
MMD1_k127_1468601_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 363.0
MMD1_k127_1468601_1 Competence-damaged protein K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000001415 164.0
MMD1_k127_1468601_2 Divergent PAP2 family K09775 - - 0.00000000000000000000000000000000000008971 147.0
MMD1_k127_1468601_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000002905 70.0
MMD1_k127_1473494_0 Peptidase M3A and M3B thimet oligopeptidase F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 475.0
MMD1_k127_1473494_1 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 435.0
MMD1_k127_1473494_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 380.0
MMD1_k127_1473494_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 353.0
MMD1_k127_1473494_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 336.0
MMD1_k127_1473494_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000007958 261.0
MMD1_k127_1474750_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000262 270.0
MMD1_k127_1474750_1 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000002987 211.0
MMD1_k127_1474750_2 DinB family - - - 0.00000000000000000000000000000000000199 146.0
MMD1_k127_1474750_3 DinB superfamily - - - 0.0003092 49.0
MMD1_k127_1480379_0 TIGRFAM MazG family protein K02499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 452.0
MMD1_k127_1480379_1 dolichyl monophosphate biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000004773 214.0
MMD1_k127_1480379_2 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000006571 56.0
MMD1_k127_1483228_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008846 569.0
MMD1_k127_1483228_1 PFAM RNA binding S1 domain protein K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001087 274.0
MMD1_k127_1483228_2 N-terminal 7TM region of histidine kinase - - - 0.00000000000000000000000000000002856 127.0
MMD1_k127_1486799_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 453.0
MMD1_k127_1486799_1 SMART PAS domain containing protein - - - 0.000000000000000000000006428 108.0
MMD1_k127_1494664_0 mechanosensitive ion channel K03442,K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 309.0
MMD1_k127_1494664_1 - - - - 0.000000000000000000006683 96.0
MMD1_k127_1494664_2 Domain of unknown function (DUF4440) - - - 0.0001084 52.0
MMD1_k127_1494688_0 AbgT putative transporter family K12942 - - 8.758e-202 636.0
MMD1_k127_1494688_1 M42 glutamyl aminopeptidase K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 612.0
MMD1_k127_1494688_2 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.000000000000001395 86.0
MMD1_k127_1506187_0 amidohydrolase - - - 0.00000000000000000000000000000001858 146.0
MMD1_k127_1506187_1 rhs-related protein - - - 0.000000000000000000000421 105.0
MMD1_k127_1506187_2 Protein of unknown function (DUF1349) - - - 0.0000000000007774 78.0
MMD1_k127_1506187_3 domain, Protein K01218 - 3.2.1.78 0.00003359 51.0
MMD1_k127_1512948_0 PFAM luciferase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 357.0
MMD1_k127_1512948_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 325.0
MMD1_k127_1512948_10 sh3 domain protein K01448 - 3.5.1.28 0.0004837 51.0
MMD1_k127_1512948_2 Formate/nitrite transporter K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005715 321.0
MMD1_k127_1512948_3 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000001696 241.0
MMD1_k127_1512948_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.000000000000000000000000000000000000000000000000000000001032 208.0
MMD1_k127_1512948_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000006877 193.0
MMD1_k127_1512948_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000002531 157.0
MMD1_k127_1512948_7 PFAM thioesterase superfamily protein K07107 - - 0.00000000000000000000000000000000005777 141.0
MMD1_k127_1512948_8 PFAM regulatory protein AsnC Lrp family - - - 0.000000000001191 70.0
MMD1_k127_1512948_9 Phosphotransferase enzyme family - - - 0.0000000007493 62.0
MMD1_k127_1513116_0 PFAM ABC transporter transmembrane region K06147 - - 6.389e-257 807.0
MMD1_k127_1513116_1 PFAM ABC transporter transmembrane region K06147 - - 9.046e-251 791.0
MMD1_k127_1513116_2 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 361.0
MMD1_k127_1513116_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000006022 70.0
MMD1_k127_1513967_0 Transketolase, pyrimidine binding domain K00167,K21417 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 442.0
MMD1_k127_1513967_1 PFAM dehydrogenase, E1 component K00166 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005304 349.0
MMD1_k127_1513967_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.00000000000000000000000000000000000001537 149.0
MMD1_k127_1513967_3 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000002549 119.0
MMD1_k127_1513967_4 DinB superfamily - - - 0.0000000000000000000000009977 114.0
MMD1_k127_151609_0 Serine threonine protein kinase K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 395.0
MMD1_k127_151609_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 344.0
MMD1_k127_151609_2 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000002841 219.0
MMD1_k127_1519379_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000002466 187.0
MMD1_k127_1519379_1 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.0009424 46.0
MMD1_k127_1527323_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 2.668e-200 632.0
MMD1_k127_1529791_0 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 585.0
MMD1_k127_154039_0 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 531.0
MMD1_k127_154039_1 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000009205 111.0
MMD1_k127_154039_2 DUF218 domain - - - 0.00007684 52.0
MMD1_k127_1541592_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 397.0
MMD1_k127_1545993_0 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001939 276.0
MMD1_k127_1549732_0 PFAM ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 527.0
MMD1_k127_1549732_1 serine threonine protein kinase - - - 0.000000000001161 73.0
MMD1_k127_1559224_0 conserved protein (DUF2156) K14205 - 2.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009571 303.0
MMD1_k127_1559224_1 lysyltransferase activity K07027 - - 0.0000000000000000000000000000000000000000000001365 190.0
MMD1_k127_1582834_0 PFAM thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004231 274.0
MMD1_k127_1582834_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000003144 259.0
MMD1_k127_1582834_2 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000000000000000000001858 201.0
MMD1_k127_1582834_3 Ribosomal L27 protein K02899 - - 0.000000000000000000000000000001446 122.0
MMD1_k127_1582834_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000632 107.0
MMD1_k127_1582834_5 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.0000001149 57.0
MMD1_k127_1586950_0 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 520.0
MMD1_k127_1586950_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 424.0
MMD1_k127_1586950_2 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 338.0
MMD1_k127_1586950_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 319.0
MMD1_k127_1586950_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001738 277.0
MMD1_k127_1586950_5 - - - - 0.0000000000000000000000000000323 127.0
MMD1_k127_1586950_6 Transcriptional regulator, arsR family - - - 0.000000000000000000000000009869 113.0
MMD1_k127_1586950_7 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000004082 88.0
MMD1_k127_1597088_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.939e-219 702.0
MMD1_k127_1597088_1 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis K03816 - 2.4.2.22 0.00000000000000000000000000000000000000000000000000000000000000000000000005433 257.0
MMD1_k127_1597088_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000001771 198.0
MMD1_k127_1597088_3 thiolester hydrolase activity - - - 0.0000004105 60.0
MMD1_k127_1597088_4 - - - - 0.0001134 46.0
MMD1_k127_1607981_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 331.0
MMD1_k127_1607981_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000025 207.0
MMD1_k127_1619194_0 Heat shock 70 kDa protein K04043 - - 4.098e-292 908.0
MMD1_k127_1619194_1 cysteine-tRNA ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 294.0
MMD1_k127_1619194_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000008671 222.0
MMD1_k127_1619194_3 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000005922 185.0
MMD1_k127_1619194_4 Histidine kinase K07777 - 2.7.13.3 0.0000000000000000000000000000000000000000000005726 188.0
MMD1_k127_1619194_5 Predicted membrane protein (DUF2085) - - - 0.00000000000000000000000000000000000000003241 160.0
MMD1_k127_1619194_6 peptidase - - - 0.00000000000000000000000000000000518 138.0
MMD1_k127_1619194_7 YHS domain - - - 0.0000000000000001617 80.0
MMD1_k127_1628385_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 494.0
MMD1_k127_1628385_1 Belongs to the MenA family. Type 1 subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 311.0
MMD1_k127_1630616_0 Peptidase family M41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008672 328.0
MMD1_k127_1630616_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000006017 114.0
MMD1_k127_1630616_2 elongation factor Tu domain 2 protein K02355 - - 0.0000000000000008331 78.0
MMD1_k127_1630616_3 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.102 0.000000000001959 79.0
MMD1_k127_1630616_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00001521 52.0
MMD1_k127_1635999_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 549.0
MMD1_k127_1635999_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009995 296.0
MMD1_k127_1635999_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 290.0
MMD1_k127_1636478_0 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 296.0
MMD1_k127_1636478_1 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000003032 230.0
MMD1_k127_1653497_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 496.0
MMD1_k127_1653497_1 DNA-binding transcription factor activity K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000003553 183.0
MMD1_k127_1653497_2 PFAM ABC-2 type transporter K09690 - - 0.0000000000000001258 84.0
MMD1_k127_1653497_3 - - - - 0.000000001301 68.0
MMD1_k127_1658002_0 Uncharacterized membrane protein (DUF2298) - - - 0.0000000000000000000000000000000000000009207 156.0
MMD1_k127_1658002_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000006783 72.0
MMD1_k127_16622_0 SERine Proteinase INhibitors K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008754 409.0
MMD1_k127_16622_1 PFAM sugar isomerase (SIS) K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 344.0
MMD1_k127_16622_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000002545 173.0
MMD1_k127_1674373_0 enterobactin catabolic process K07214 - - 0.000000000000008839 85.0
MMD1_k127_1674373_1 LysM domain K02020 - - 0.0000009381 53.0
MMD1_k127_1682811_0 PFAM diacylglycerol kinase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000001353 229.0
MMD1_k127_1682811_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000001239 124.0
MMD1_k127_1693199_0 Pyridoxal-phosphate dependent enzyme K17950 - 4.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 361.0
MMD1_k127_1693199_1 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 321.0
MMD1_k127_1693199_2 GyrI-like small molecule binding domain - - - 0.00000000000000000000000000000000000000000000000000000265 198.0
MMD1_k127_1694529_0 Binding-protein-dependent transport system inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003355 267.0
MMD1_k127_1694529_1 Bacterial extracellular solute-binding protein K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0040007,GO:0042597,GO:0043167,GO:0043168,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704 - 0.00000000000000000000000000000000000005827 146.0
MMD1_k127_1694529_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000003298 64.0
MMD1_k127_1701880_0 Transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000005919 153.0
MMD1_k127_1701880_1 PFAM IS1 transposase K07480 - - 0.00000000000000000000000000000000005482 144.0
MMD1_k127_1728763_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 5.857e-228 721.0
MMD1_k127_1728763_1 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 522.0
MMD1_k127_1728763_2 - - - - 0.000000000000000000000000000000000000000000000000000000000008555 218.0
MMD1_k127_1728763_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000001001 194.0
MMD1_k127_1728763_4 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.00000000000000000000000000000000000001498 150.0
MMD1_k127_1728763_5 Prenyltransferase and squalene oxidase repeat - - - 0.000000000000000000000000000000003377 138.0
MMD1_k127_1728763_7 Cobalt transport protein K16785 - - 0.00000000000000000008296 104.0
MMD1_k127_1728763_8 phosphatase activity K07025,K08723 - 3.1.3.5 0.0000001901 54.0
MMD1_k127_1728763_9 Prenyltransferase and squalene oxidase repeat - - - 0.000002282 55.0
MMD1_k127_1732813_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 3.412e-230 720.0
MMD1_k127_1732813_1 cytokinin biosynthetic process K06966 - 3.2.2.10 0.0000000000000000000000000000001242 132.0
MMD1_k127_173422_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00112 - 1.1.5.3 0.0000000000000000000000000000000000000000000008833 181.0
MMD1_k127_173422_1 BFD domain protein 2Fe-2S -binding domain protein K00111 - 1.1.5.3 0.0000000000000000000000002472 109.0
MMD1_k127_1738543_0 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 520.0
MMD1_k127_1738543_1 TIGRFAM cysteine desulfurase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 492.0
MMD1_k127_1738543_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor - - - 0.0000000000000000000000000000000000000000000121 171.0
MMD1_k127_1738543_3 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000004411 147.0
MMD1_k127_1738543_4 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000001818 140.0
MMD1_k127_1738543_5 iron-sulfur cluster assembly - - - 0.0000000000000000000000003884 114.0
MMD1_k127_1738543_6 domain, Protein - - - 0.0000000000000000000000009845 118.0
MMD1_k127_1738543_7 - - - - 0.0000000000000001423 85.0
MMD1_k127_1746262_0 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001876 235.0
MMD1_k127_1746262_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000002811 201.0
MMD1_k127_1746262_2 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000007569 162.0
MMD1_k127_1758685_0 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 355.0
MMD1_k127_1766493_0 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 1.334e-234 744.0
MMD1_k127_1766493_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 389.0
MMD1_k127_1766493_2 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 350.0
MMD1_k127_1766493_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 291.0
MMD1_k127_1766493_4 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000000238 175.0
MMD1_k127_1766493_5 Cold shock protein K03704 - - 0.000000000000000000003311 95.0
MMD1_k127_1766493_6 - - - - 0.000000009771 65.0
MMD1_k127_1766979_0 Aminotransferase class I and II K00013,K00817 - 1.1.1.23,2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 396.0
MMD1_k127_1766979_1 phosphonoacetaldehyde hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 375.0
MMD1_k127_1766979_2 - - - - 0.000000000000000000000000000000000000000000001391 169.0
MMD1_k127_1770377_0 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 353.0
MMD1_k127_1770377_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002732 267.0
MMD1_k127_1770377_2 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000001929 224.0
MMD1_k127_1773345_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000001634 214.0
MMD1_k127_1773345_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.0000000000000000000000000000000000000000000001268 185.0
MMD1_k127_1773345_2 PFAM Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.000000000000000001389 92.0
MMD1_k127_1787997_0 Transposase IS116 IS110 IS902 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 408.0
MMD1_k127_1802318_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 409.0
MMD1_k127_1802318_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 367.0
MMD1_k127_1802318_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 339.0
MMD1_k127_1802318_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0031974,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0070013,GO:0071704,GO:0072329,GO:1901575 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000002043 223.0
MMD1_k127_1802318_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000003076 120.0
MMD1_k127_1848997_0 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000003131 166.0
MMD1_k127_1848997_1 - - - - 0.000005261 53.0
MMD1_k127_1849502_0 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 316.0
MMD1_k127_1849502_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001069 218.0
MMD1_k127_1849502_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000007886 105.0
MMD1_k127_1850421_0 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 512.0
MMD1_k127_1850421_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 382.0
MMD1_k127_1850421_2 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 383.0
MMD1_k127_1850421_3 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001172 286.0
MMD1_k127_1850421_4 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005327 278.0
MMD1_k127_1854580_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 1.769e-203 646.0
MMD1_k127_1854580_1 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 555.0
MMD1_k127_1854580_2 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 402.0
MMD1_k127_1854580_3 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 387.0
MMD1_k127_1854580_5 Domain of unknown function (DUF3786) - - - 0.0000000000000001947 91.0
MMD1_k127_1863792_0 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000003922 232.0
MMD1_k127_1863792_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000008475 144.0
MMD1_k127_1868446_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000002123 186.0
MMD1_k127_1871294_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 330.0
MMD1_k127_1871294_1 Domain of unknown function (DUF362) - - - 0.00000000000000000002961 101.0
MMD1_k127_1876882_0 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001665 291.0
MMD1_k127_1876882_1 - - - - 0.00000000004031 74.0
MMD1_k127_1878282_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 426.0
MMD1_k127_1878282_1 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.00000000000000000000000000002423 124.0
MMD1_k127_1898796_0 Binding-protein-dependent transport system inner membrane component K02026,K17243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 330.0
MMD1_k127_1898796_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000004978 247.0
MMD1_k127_1898796_2 Binding-protein-dependent transport system inner membrane component K17242 - - 0.000000000000000000000000000000000000000000000002314 176.0
MMD1_k127_1909917_0 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 376.0
MMD1_k127_1909917_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000009509 93.0
MMD1_k127_1911423_0 transposase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 397.0
MMD1_k127_1932324_0 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002631 278.0
MMD1_k127_1932324_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000207 164.0
MMD1_k127_1938148_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 455.0
MMD1_k127_1938148_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 433.0
MMD1_k127_1948899_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0 1304.0
MMD1_k127_1948899_1 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 335.0
MMD1_k127_1948899_2 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000004513 243.0
MMD1_k127_1948899_3 energy transducer activity K03531,K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000004752 239.0
MMD1_k127_1948899_4 Redoxin K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000003532 196.0
MMD1_k127_1948899_5 - - - - 0.0000000000000000000000000000002599 137.0
MMD1_k127_1948899_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000001198 78.0
MMD1_k127_1948899_8 ubiE/COQ5 methyltransferase family - - - 0.000000000000004004 83.0
MMD1_k127_1952523_0 Aldo/keto reductase family K05882 - 1.1.1.91 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 497.0
MMD1_k127_1952523_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 377.0
MMD1_k127_1952523_2 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 292.0
MMD1_k127_1952523_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000003606 151.0
MMD1_k127_1956067_0 Serine threonine protein kinase K12132 - 2.7.11.1 4.592e-256 803.0
MMD1_k127_1956067_1 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 483.0
MMD1_k127_1956067_2 SMART AAA ATPase K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 466.0
MMD1_k127_1956067_3 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 410.0
MMD1_k127_1956067_4 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 337.0
MMD1_k127_1956067_5 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000003417 252.0
MMD1_k127_1956067_6 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000003139 237.0
MMD1_k127_1956067_7 GtrA-like protein - - - 0.00000000000000000000000000000000000000001493 161.0
MMD1_k127_1956067_8 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000234 158.0
MMD1_k127_1956067_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000001808 107.0
MMD1_k127_1957295_0 Aldehyde dehydrogenase family K04021,K13922 GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 350.0
MMD1_k127_1957295_1 BMC - - - 0.0000000000000000000000000000000000007723 146.0
MMD1_k127_196230_0 SMART RNA-processing protein HAT helix repeating-containing protein - - - 0.000000000000000000004504 110.0
MMD1_k127_196230_1 - - - - 0.00000000000000002732 93.0
MMD1_k127_196230_2 Tetratricopeptide repeat - - - 0.00000002151 68.0
MMD1_k127_196955_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 1.666e-245 762.0
MMD1_k127_1977598_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 2.863e-206 651.0
MMD1_k127_1977598_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 306.0
MMD1_k127_1989277_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 548.0
MMD1_k127_1993725_0 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.102 0.0000000000000000000000000000000000000000000000000000008104 207.0
MMD1_k127_1993725_1 - - - - 0.0000000000000000000000000000000000000000000000000001248 203.0
MMD1_k127_1993725_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000001198 185.0
MMD1_k127_1993725_3 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000002158 204.0
MMD1_k127_1993725_4 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.000000000000000000000000000000000000000003714 162.0
MMD1_k127_1993725_5 - - - - 0.0000000000003201 75.0
MMD1_k127_2002435_0 PhoQ Sensor K07682 GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 338.0
MMD1_k127_2002435_1 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000003216 262.0
MMD1_k127_2002435_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000003486 157.0
MMD1_k127_2010067_0 COG5659 FOG Transposase - - - 1.463e-245 766.0
MMD1_k127_2016369_0 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 344.0
MMD1_k127_2033189_0 Homeodomain-like domain - - - 0.000000000000000000000000004835 121.0
MMD1_k127_2033189_1 DoxX-like family - - - 0.000000000000000000001676 97.0
MMD1_k127_2074335_0 Belongs to the thiolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 390.0
MMD1_k127_2074335_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000827 189.0
MMD1_k127_2074335_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000002673 69.0
MMD1_k127_2087035_0 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 348.0
MMD1_k127_2087035_1 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000007481 224.0
MMD1_k127_2087035_2 tungstate ion transport K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000008436 221.0
MMD1_k127_2087035_3 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000291 172.0
MMD1_k127_2087035_4 Blue (Type 1) copper domain protein - - - 0.00000000000000000000009719 100.0
MMD1_k127_2087035_5 Belongs to the 'phage' integrase family K04763 - - 0.0001028 45.0
MMD1_k127_2107703_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 374.0
MMD1_k127_210810_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009381 250.0
MMD1_k127_210810_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000002846 152.0
MMD1_k127_210810_3 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000004871 58.0
MMD1_k127_210981_0 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000704 122.0
MMD1_k127_210981_1 Baseplate J-like protein K01218 - 3.2.1.78 0.00000000000000000000001485 111.0
MMD1_k127_210981_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000002012 55.0
MMD1_k127_2110153_0 Peptidase dimerisation domain protein K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000309 234.0
MMD1_k127_2110153_1 - - - - 0.0000000000000000000000000000002124 127.0
MMD1_k127_2112033_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K14090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 599.0
MMD1_k127_2112033_1 PFAM Nickel-dependent hydrogenase, large subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 561.0
MMD1_k127_2112033_10 phosphorelay signal transduction system - - - 0.00000000000000000000000000005628 122.0
MMD1_k127_2112033_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332,K13378 - 1.6.5.3 0.0000000000000000000000008071 110.0
MMD1_k127_2112033_13 hydrogenase maturation protease K08315 - 3.4.23.51 0.00000000000000000171 94.0
MMD1_k127_2112033_14 Hydrogenase maturation protease K03605 - - 0.000000000000000002767 93.0
MMD1_k127_2112033_2 ATP synthesis coupled electron transport K00342,K00343,K05568 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 507.0
MMD1_k127_2112033_3 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 417.0
MMD1_k127_2112033_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 407.0
MMD1_k127_2112033_5 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 375.0
MMD1_k127_2112033_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 301.0
MMD1_k127_2112033_7 NADH ubiquinone oxidoreductase, 20 Kd subunit K14088 - - 0.000000000000000000000000000000000000000000000000000000000000000005876 232.0
MMD1_k127_2112033_8 Histidine kinase HAMP - - - 0.000000000000000000000000000000009103 141.0
MMD1_k127_2112033_9 4Fe-4S binding domain K14091 - - 0.0000000000000000000000000000123 133.0
MMD1_k127_2113681_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007448 275.0
MMD1_k127_2113681_1 Lamin Tail Domain - - - 0.00000000000000000000000000000265 130.0
MMD1_k127_2113681_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000005153 104.0
MMD1_k127_2113681_3 PspC domain - - - 0.0000000000000000009324 87.0
MMD1_k127_2118280_0 Domain of unknown function (DUF4445) - - - 4.95e-224 712.0
MMD1_k127_2118280_1 cobalamin binding K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 325.0
MMD1_k127_2118280_2 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007084 286.0
MMD1_k127_2119676_0 Domain of unknown function DUF11 - - - 1.773e-231 744.0
MMD1_k127_2119676_1 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008401 261.0
MMD1_k127_2119676_2 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000003167 201.0
MMD1_k127_214163_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 6.563e-303 942.0
MMD1_k127_214163_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000007946 222.0
MMD1_k127_2155136_0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 0.0000000000000000000000000000000005404 147.0
MMD1_k127_2155136_1 GIY-YIG catalytic domain K07461 - - 0.00000000000000000000000000001309 124.0
MMD1_k127_2155136_2 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000006975 78.0
MMD1_k127_2155136_3 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000006998 61.0
MMD1_k127_2163139_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 497.0
MMD1_k127_2163139_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000406 226.0
MMD1_k127_2163139_2 nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000001059 147.0
MMD1_k127_2163139_3 diguanylate cyclase - - - 0.0000000000000000000000000002146 123.0
MMD1_k127_2163139_4 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000008058 106.0
MMD1_k127_216390_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 5.433e-247 775.0
MMD1_k127_216390_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000007274 254.0
MMD1_k127_216390_2 Psort location Cytoplasmic, score 8.87 K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000007358 248.0
MMD1_k127_216390_3 oxidoreductase activity, acting on CH-OH group of donors K09386 - - 0.00000000000000000000000000000000008997 138.0
MMD1_k127_216390_4 Transposase - - - 0.000000000000000000000000000000002319 138.0
MMD1_k127_216390_5 Protein of unknown function (DUF429) - - - 0.000000000000000001512 97.0
MMD1_k127_216390_6 PFAM Dual specificity protein phosphatase - - - 0.00001513 55.0
MMD1_k127_2167527_0 Transposase IS66 family K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 378.0
MMD1_k127_2167527_1 Transposase, Mutator family - - - 0.000000001353 59.0
MMD1_k127_2174757_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000007879 94.0
MMD1_k127_2187478_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 388.0
MMD1_k127_2187478_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000005378 205.0
MMD1_k127_2187478_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000003019 155.0
MMD1_k127_2187478_3 PFAM glycosyl transferase, family 51 - - - 0.000000000006835 76.0
MMD1_k127_2187478_4 NUDIX hydrolase - GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 - 0.00003259 46.0
MMD1_k127_2191908_0 Peptidase M48 K06013 - 3.4.24.84 0.00000000004007 71.0
MMD1_k127_2194864_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0000000000000000000000000000000000000000000000000000000000000000003753 232.0
MMD1_k127_2194864_1 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000001099 171.0
MMD1_k127_2194864_2 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000000000000000006064 128.0
MMD1_k127_2208612_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1033.0
MMD1_k127_2208612_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000003102 226.0
MMD1_k127_2208612_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000002725 200.0
MMD1_k127_2208612_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000008546 77.0
MMD1_k127_2208612_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000007943 48.0
MMD1_k127_2215568_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 344.0
MMD1_k127_221891_0 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 345.0
MMD1_k127_221891_1 Sodium/hydrogen exchanger family K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 313.0
MMD1_k127_221891_2 Belongs to the P(II) protein family K02806,K04752 - - 0.00000000000006194 77.0
MMD1_k127_2224683_0 PFAM type II secretion system protein E K02283 - - 3.602e-222 696.0
MMD1_k127_2224683_1 PFAM response regulator receiver K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 394.0
MMD1_k127_2224683_2 PFAM type II secretion system protein K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 328.0
MMD1_k127_2224683_3 histidine kinase, dimerisation and phosphoacceptor region K07777 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 327.0
MMD1_k127_2224683_4 PFAM type II secretion system protein K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 319.0
MMD1_k127_2224683_5 ATP hydrolysis coupled proton transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006951 252.0
MMD1_k127_2224683_6 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000001177 211.0
MMD1_k127_2224683_7 Flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000000000001437 203.0
MMD1_k127_2224683_8 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000006742 142.0
MMD1_k127_2243001_0 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000000001632 193.0
MMD1_k127_2243001_1 heat shock protein binding - - - 0.000000000000000000000000000001676 127.0
MMD1_k127_2243001_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000003701 69.0
MMD1_k127_2243509_0 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000002368 232.0
MMD1_k127_2243509_1 FHA domain - - - 0.000003709 57.0
MMD1_k127_2245796_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 584.0
MMD1_k127_2245796_1 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 366.0
MMD1_k127_2245796_2 Domain of unknown function (DUF4340) - - - 0.0000002301 61.0
MMD1_k127_2256581_0 Domain of unknown function (DUF4395) - - - 0.00000000000000000000000000000000000000004673 160.0
MMD1_k127_2256581_1 ThiS family K03636 - - 0.00000000000000000003702 99.0
MMD1_k127_2256581_2 COG0526, thiol-disulfide isomerase and thioredoxins K03671 - - 0.000000000000000001941 96.0
MMD1_k127_2258319_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000004395 148.0
MMD1_k127_2258319_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000005406 72.0
MMD1_k127_2260948_0 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 458.0
MMD1_k127_2260948_1 Methionine synthase B12-binding module cap domain protein K00548,K15023 - 2.1.1.13,2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 415.0
MMD1_k127_2260948_10 amidohydrolase - - - 0.000000000000000000000000000000000000002042 162.0
MMD1_k127_2260948_11 Virulence factor - - - 0.000000000000000000003155 96.0
MMD1_k127_2260948_12 COG3414 Phosphotransferase system, galactitol-specific IIB component K02774 - 2.7.1.200 0.0000000000000000002839 91.0
MMD1_k127_2260948_2 system Galactitol-specific IIC component K02775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 406.0
MMD1_k127_2260948_3 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 342.0
MMD1_k127_2260948_4 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 326.0
MMD1_k127_2260948_5 Psort location Cytoplasmic, score K06971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 310.0
MMD1_k127_2260948_6 Protein of unknown function (DUF1638) - - - 0.0000000000000000000000000000000000000000000000000000000000000007445 226.0
MMD1_k127_2260948_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000154 184.0
MMD1_k127_2260948_8 methylenetetrahydrofolate reductase (NAD(P)H) activity K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000001669 168.0
MMD1_k127_2260948_9 Transcriptional antiterminator K03483 - - 0.0000000000000000000000000000000000000000003372 177.0
MMD1_k127_2263727_0 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000232 254.0
MMD1_k127_2263727_1 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000002677 139.0
MMD1_k127_2268518_0 pathogenesis K21471,K21687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 392.0
MMD1_k127_2268518_1 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000003523 267.0
MMD1_k127_2268518_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000008533 253.0
MMD1_k127_2268518_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000001156 178.0
MMD1_k127_2274623_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 512.0
MMD1_k127_2274623_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000003844 68.0
MMD1_k127_2276622_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 386.0
MMD1_k127_2276622_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 329.0
MMD1_k127_2276622_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 310.0
MMD1_k127_2276622_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000007136 187.0
MMD1_k127_2276622_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000001097 144.0
MMD1_k127_2276622_5 integral membrane protein - - - 0.00000000000000000000000000000000771 132.0
MMD1_k127_2278097_0 Amidohydrolase family - - - 0.00000000000000000000000000003545 134.0
MMD1_k127_2279187_0 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
MMD1_k127_2279187_1 KR domain K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000001666 187.0
MMD1_k127_2279187_2 DinB superfamily - - - 0.0000000003376 68.0
MMD1_k127_2282210_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 444.0
MMD1_k127_2282501_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 328.0
MMD1_k127_2282501_1 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000003356 120.0
MMD1_k127_2282501_2 THIoesterase K18700 - 3.1.2.29 0.0000000000000000003696 92.0
MMD1_k127_228632_0 - - - - 0.00000001182 67.0
MMD1_k127_228632_1 serine threonine protein kinase - - - 0.0001622 48.0
MMD1_k127_2289086_0 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000009281 236.0
MMD1_k127_2289086_1 organic phosphonate transmembrane transporter activity K02042 - - 0.000000000000000000000000000000000000000000000000000008104 203.0
MMD1_k127_2289086_2 GTP binding - - - 0.00000000000000000000000000000000000000000004408 172.0
MMD1_k127_2291775_0 Glycosyltransferase 28 domain K03715 - 2.4.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 369.0
MMD1_k127_2291775_1 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000001007 200.0
MMD1_k127_2291775_2 Bacterial protein of unknown function (DUF951) - - - 0.0000000000000000000001176 98.0
MMD1_k127_2291775_3 Ethyl tert-butyl ether degradation - - - 0.00000000000001108 82.0
MMD1_k127_2295902_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 344.0
MMD1_k127_2295902_1 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 346.0
MMD1_k127_2295902_2 L-lactate permease K03303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 348.0
MMD1_k127_2295902_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000000001944 141.0
MMD1_k127_2295902_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000005476 136.0
MMD1_k127_2295902_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000005951 121.0
MMD1_k127_2295902_6 RNA polymerase sigma factor K03088 - - 0.00000000000009521 78.0
MMD1_k127_2295902_7 Domain of unknown function (DUF1971) K16868 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0010035,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0046690,GO:0050896 2.1.1.265 0.000002621 57.0
MMD1_k127_2310435_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 341.0
MMD1_k127_2316251_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 367.0
MMD1_k127_2316251_1 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 310.0
MMD1_k127_2316251_2 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000005267 205.0
MMD1_k127_2321614_0 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 395.0
MMD1_k127_2321614_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 320.0
MMD1_k127_2321614_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002135 278.0
MMD1_k127_2321614_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000001162 192.0
MMD1_k127_2321614_4 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000004089 187.0
MMD1_k127_2321614_5 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000001889 81.0
MMD1_k127_2321614_6 - - - - 0.00003012 50.0
MMD1_k127_2323506_0 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009615 232.0
MMD1_k127_2323506_1 Predicted membrane protein (DUF2085) - - - 0.000000000000000000000000000000000000000000000000000002086 202.0
MMD1_k127_2323506_2 Protein of unknown function (DUF402) K07586 - - 0.0000000000000000000003438 100.0
MMD1_k127_2323506_3 protein kinase activity - - - 0.000003251 53.0
MMD1_k127_2358548_0 protein histidine kinase activity K02484,K07636,K07642 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 428.0
MMD1_k127_2358548_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 288.0
MMD1_k127_2368743_0 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 589.0
MMD1_k127_2368743_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001116 273.0
MMD1_k127_2368743_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000188 84.0
MMD1_k127_2378515_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 454.0
MMD1_k127_2378515_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 426.0
MMD1_k127_2378515_2 Metallopeptidase family M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 373.0
MMD1_k127_2378515_3 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.00008109 53.0
MMD1_k127_2385065_0 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 393.0
MMD1_k127_2385065_1 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 314.0
MMD1_k127_2385065_2 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000002631 219.0
MMD1_k127_2385065_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000004101 186.0
MMD1_k127_2397049_0 B12 binding domain - - - 2e-227 713.0
MMD1_k127_2397049_1 Uncharacterised ACR (DUF711) K09157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 333.0
MMD1_k127_2397049_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000002666 178.0
MMD1_k127_2397049_3 Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization activation - GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231 - 0.0000000000000000000000000000000000000000000241 172.0
MMD1_k127_2397049_4 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000001158 59.0
MMD1_k127_2418323_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 393.0
MMD1_k127_2418323_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000002622 102.0
MMD1_k127_2436336_0 PFAM Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 402.0
MMD1_k127_2443533_0 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 409.0
MMD1_k127_2443533_1 Protein of unknown function (DUF1461) - - - 0.000000000000000000000000000000000000000000004708 171.0
MMD1_k127_2447237_0 WD40-like Beta Propeller Repeat - - - 0.0000005349 59.0
MMD1_k127_2448368_0 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000002106 188.0
MMD1_k127_2448368_1 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000008544 192.0
MMD1_k127_2448368_2 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000262 167.0
MMD1_k127_2454032_0 SMART AAA ATPase - - - 1.394e-217 683.0
MMD1_k127_2454032_1 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 419.0
MMD1_k127_2454032_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 322.0
MMD1_k127_2454032_3 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000004149 85.0
MMD1_k127_2459721_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 361.0
MMD1_k127_2459721_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004534 295.0
MMD1_k127_2459721_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002519 292.0
MMD1_k127_2459721_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000995 183.0
MMD1_k127_2459721_4 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.00000000000000000000000000000000000000000001999 165.0
MMD1_k127_2459721_5 - - - - 0.0000000000000008313 82.0
MMD1_k127_2459721_6 Tetratricopeptide TPR_2 repeat protein - - - 0.00000152 61.0
MMD1_k127_2463491_0 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 293.0
MMD1_k127_2463491_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003674 264.0
MMD1_k127_2463491_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000001534 214.0
MMD1_k127_247207_0 dehydrogenase, E1 component K11381 - 1.2.4.4 6.015e-239 758.0
MMD1_k127_247207_1 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 392.0
MMD1_k127_247207_10 Carotenoid biosynthesis protein - - - 0.00000000000000000000000000000000000004609 154.0
MMD1_k127_247207_11 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000007866 151.0
MMD1_k127_247207_12 PFAM deoxynucleoside kinase - - - 0.000000000000000000000000000000000002371 153.0
MMD1_k127_247207_13 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000008887 140.0
MMD1_k127_247207_14 Nucleoside 2-deoxyribosyltransferase like K08728 - 2.4.2.6 0.00000000000000000000000000004593 131.0
MMD1_k127_247207_15 zinc-ribbon domain - - - 0.00000000000008347 78.0
MMD1_k127_247207_17 Periplasmic component of the Tol biopolymer transport system - - - 0.0009127 49.0
MMD1_k127_247207_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 347.0
MMD1_k127_247207_3 Fumarase C-terminus K01676,K01678 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 309.0
MMD1_k127_247207_4 PFAM Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 308.0
MMD1_k127_247207_5 PFAM ABC transporter related K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 305.0
MMD1_k127_247207_6 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 300.0
MMD1_k127_247207_7 PFAM Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000005257 219.0
MMD1_k127_247207_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000165 171.0
MMD1_k127_2473175_0 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 436.0
MMD1_k127_2473175_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 323.0
MMD1_k127_2473175_2 PFAM LmbE family protein K18455 - 3.5.1.115 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 291.0
MMD1_k127_2473175_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005641 233.0
MMD1_k127_2473175_4 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000006767 200.0
MMD1_k127_2473175_5 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000006505 172.0
MMD1_k127_2473175_6 diguanylate cyclase - - - 0.000000000000000000000000000000003544 145.0
MMD1_k127_2473175_7 LUD domain K00782,K18929 - - 0.00000000000000000003019 98.0
MMD1_k127_248008_0 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 314.0
MMD1_k127_248008_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000002047 163.0
MMD1_k127_248008_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000002683 177.0
MMD1_k127_248008_3 - - - - 0.000005238 51.0
MMD1_k127_2480112_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 524.0
MMD1_k127_2480112_1 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 479.0
MMD1_k127_2480112_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 337.0
MMD1_k127_2480112_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000002142 205.0
MMD1_k127_2480625_0 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 366.0
MMD1_k127_2480625_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003388 272.0
MMD1_k127_2480625_2 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000002018 244.0
MMD1_k127_2480625_3 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000005111 158.0
MMD1_k127_2480625_4 PFAM cobalamin (vitamin B12) biosynthesis CbiM protein K02007 - - 0.00000000000000000000000000000000000000003003 164.0
MMD1_k127_2480625_5 RibD C-terminal domain K00082,K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000001195 159.0
MMD1_k127_2480625_6 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000009 108.0
MMD1_k127_249470_0 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000002412 177.0
MMD1_k127_249470_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000001393 148.0
MMD1_k127_249470_2 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.0000000000000005874 85.0
MMD1_k127_249470_3 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00002179 56.0
MMD1_k127_2503220_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 384.0
MMD1_k127_2503220_1 PFAM Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 384.0
MMD1_k127_2503220_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000000000000001646 149.0
MMD1_k127_2503220_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000003109 89.0
MMD1_k127_2510110_0 Transposase, Mutator family - - - 1.134e-208 655.0
MMD1_k127_2510110_1 Transposase and inactivated derivatives - - - 0.000001171 52.0
MMD1_k127_2513647_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 286.0
MMD1_k127_2513647_1 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000579 218.0
MMD1_k127_2513647_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000003969 86.0
MMD1_k127_2517479_0 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000001859 252.0
MMD1_k127_2517479_1 KR domain - - - 0.000000000000000000000000000000005929 133.0
MMD1_k127_2520310_0 Evidence 5 No homology to any previously reported sequences K07004 - - 2.59e-293 937.0
MMD1_k127_2520310_1 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000001644 236.0
MMD1_k127_2520310_2 TadE-like protein - - - 0.000000002 63.0
MMD1_k127_2535236_0 domain, Protein K01219,K17624 - 3.2.1.81,3.2.1.97 2.918e-240 764.0
MMD1_k127_2535236_1 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 1.594e-194 623.0
MMD1_k127_2535236_10 PFAM chemotaxis sensory transducer - - - 0.00000000005049 75.0
MMD1_k127_2535236_11 N-terminal domain of cytochrome oxidase-cbb3, FixP K00406 - - 0.0000000002906 65.0
MMD1_k127_2535236_12 - - - - 0.00001395 56.0
MMD1_k127_2535236_2 Cytochrome b/b6/petB K00412,K03888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000413 244.0
MMD1_k127_2535236_3 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000007082 217.0
MMD1_k127_2535236_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000005354 197.0
MMD1_k127_2535236_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000002975 188.0
MMD1_k127_2535236_6 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000004188 180.0
MMD1_k127_2535236_7 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000000000000001552 120.0
MMD1_k127_2535236_8 Cytochrome c - - - 0.000000000000000000000000007546 128.0
MMD1_k127_2535236_9 Cytochrome b(C-terminal)/b6/petD K03888 - - 0.00000000000000000000000009414 124.0
MMD1_k127_2566763_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 590.0
MMD1_k127_2566763_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 352.0
MMD1_k127_2566763_2 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.000003854 55.0
MMD1_k127_256879_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352,K21307 - 1.8.5.5,1.8.5.6 7.41e-253 799.0
MMD1_k127_256879_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124,K07307 - - 0.0000000000000000000000000000000000000000000000000000000000009078 217.0
MMD1_k127_2573344_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 392.0
MMD1_k127_2596188_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 505.0
MMD1_k127_2596188_1 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 384.0
MMD1_k127_2596188_2 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009622 289.0
MMD1_k127_2596188_3 Rubrerythrin K22336 - 1.16.3.1 0.0000000000000000000000000000000000000000001229 165.0
MMD1_k127_2597619_0 Bacterial membrane protein YfhO - - - 0.000000000000000000000000000000000000000000000000000000000000002215 235.0
MMD1_k127_2597619_1 - - - - 0.00000000000000000000003107 110.0
MMD1_k127_261141_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 601.0
MMD1_k127_261141_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000001483 238.0
MMD1_k127_261141_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000001024 206.0
MMD1_k127_261141_3 - - - - 0.00000000000000006011 88.0
MMD1_k127_2615123_0 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 378.0
MMD1_k127_2621109_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1.164e-293 917.0
MMD1_k127_2621109_1 Iron-sulfur cluster-binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 430.0
MMD1_k127_2621109_2 protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000001424 140.0
MMD1_k127_2621109_3 Glycolate oxidase K11473 - - 0.000000000000000000000000000001903 129.0
MMD1_k127_2621109_4 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.000000000000000008824 90.0
MMD1_k127_2625775_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 462.0
MMD1_k127_2625775_1 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000001645 183.0
MMD1_k127_2638993_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002509 271.0
MMD1_k127_2638993_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.000000000000000000000000000003953 129.0
MMD1_k127_2638993_2 S-layer homology domain - - - 0.00000000000000000000008978 113.0
MMD1_k127_2638993_3 Zinc finger domain - - - 0.000002121 58.0
MMD1_k127_2640353_0 PFAM DoxX family protein K15977 - - 0.0000000000000000000002072 101.0
MMD1_k127_264305_0 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000005324 238.0
MMD1_k127_264305_1 Cyclic nucleotide-monophosphate binding domain K21564 - - 0.0000000000000000000000000000000000000000000000002334 186.0
MMD1_k127_264305_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000005733 157.0
MMD1_k127_264305_3 Domain of unknown function (DUF1858) - - - 0.0000002278 55.0
MMD1_k127_2658236_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.558e-222 702.0
MMD1_k127_2658236_1 - - - - 0.0000007441 61.0
MMD1_k127_2658506_0 Protein of unknown function (DUF1116) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 542.0
MMD1_k127_2658506_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 484.0
MMD1_k127_2658506_2 Protein of unknown function (DUF1706) - - - 0.00000000001104 68.0
MMD1_k127_2702739_0 PFAM membrane-flanked domain - - - 0.0000000000000000000000000000000000000000000000000000002581 201.0
MMD1_k127_2702739_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000105 164.0
MMD1_k127_2702739_2 self proteolysis - - - 0.00000000000000000000000000000000007882 151.0
MMD1_k127_2702739_3 Protein of unknown function (DUF459) - - - 0.00003914 56.0
MMD1_k127_2715420_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 574.0
MMD1_k127_2715420_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000006334 244.0
MMD1_k127_2715420_2 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000000000000001422 186.0
MMD1_k127_2715420_3 Nitroreductase family - - - 0.0000000000000000000000000000000000000116 157.0
MMD1_k127_2715420_4 - - - - 0.0000000000000000000000000000000000004967 147.0
MMD1_k127_2715420_5 Peptidase M16 domain protein K07263 - - 0.000000000000000000000000009858 116.0
MMD1_k127_2721200_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 387.0
MMD1_k127_2721200_1 Type IV leader peptidase family K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000003059 193.0
MMD1_k127_2721200_2 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000001291 141.0
MMD1_k127_2721200_3 general secretion pathway protein K02456,K02650,K10924 - - 0.0002769 49.0
MMD1_k127_2723452_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 453.0
MMD1_k127_2723452_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 310.0
MMD1_k127_2723452_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003182 274.0
MMD1_k127_2723452_3 - - - - 0.00000000000000000000000000000000000000000000009539 186.0
MMD1_k127_2723452_4 Rhs_assc_core RHS repeat-associated core domain protein - - - 0.00000000000000008903 94.0
MMD1_k127_2739055_0 Penicillin amidase K01434 - 3.5.1.11 4.344e-282 893.0
MMD1_k127_2739055_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 450.0
MMD1_k127_2739055_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000004548 244.0
MMD1_k127_2739055_3 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000004677 242.0
MMD1_k127_2739055_4 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000002485 184.0
MMD1_k127_2739055_5 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000001964 183.0
MMD1_k127_2744118_0 Sulfatase K01130 - 3.1.6.1 5.558e-229 714.0
MMD1_k127_2766073_0 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000009735 136.0
MMD1_k127_2766073_1 Galactose oxidase, central domain - - - 0.000000001545 71.0
MMD1_k127_2766073_2 - - - - 0.00001111 55.0
MMD1_k127_2785776_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 6.591e-249 786.0
MMD1_k127_2785776_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 373.0
MMD1_k127_2785776_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000559 152.0
MMD1_k127_2785776_3 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000000000001805 111.0
MMD1_k127_2809862_0 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000004171 181.0
MMD1_k127_2826604_0 ISXO2-like transposase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 430.0
MMD1_k127_2845486_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.988e-261 808.0
MMD1_k127_2845486_1 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000002057 81.0
MMD1_k127_2878519_0 deoxyribonuclease IV (phage-T4-induced) activity K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 356.0
MMD1_k127_2878519_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 336.0
MMD1_k127_2878519_2 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 312.0
MMD1_k127_2878519_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000009563 190.0
MMD1_k127_2878519_4 deaminated base DNA N-glycosylase activity K03648,K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000001801 172.0
MMD1_k127_2878519_5 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000002712 92.0
MMD1_k127_2878519_6 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000001179 91.0
MMD1_k127_2891003_0 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 293.0
MMD1_k127_2891003_1 PFAM Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001803 281.0
MMD1_k127_2894552_0 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001002 259.0
MMD1_k127_2894552_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.00000005474 59.0
MMD1_k127_2910805_0 transposition, DNA-mediated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 511.0
MMD1_k127_2910805_1 transposition, DNA-mediated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 309.0
MMD1_k127_2910805_2 PFAM transposase, IS4 family protein - - - 0.00003087 48.0
MMD1_k127_2919258_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 7.307e-229 722.0
MMD1_k127_2919258_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 308.0
MMD1_k127_2932346_0 Alpha amylase, catalytic domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 336.0
MMD1_k127_2932346_1 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000006824 196.0
MMD1_k127_2932422_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 594.0
MMD1_k127_2932422_2 Parallel beta-helix repeats - - - 0.000000000003282 73.0
MMD1_k127_2937756_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000003158 186.0
MMD1_k127_2937756_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000007361 119.0
MMD1_k127_293852_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 8.737e-297 926.0
MMD1_k127_2959417_0 binding domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007908 492.0
MMD1_k127_2959417_1 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 355.0
MMD1_k127_2959714_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 7.427e-213 671.0
MMD1_k127_2961807_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 323.0
MMD1_k127_2961807_1 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 310.0
MMD1_k127_2961807_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000001422 186.0
MMD1_k127_2961807_3 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000001013 191.0
MMD1_k127_2961807_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K18121 - 1.1.1.79 0.000000000001861 72.0
MMD1_k127_2961963_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000006528 65.0
MMD1_k127_2968263_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 9.767e-315 975.0
MMD1_k127_2968839_0 PFAM PfkB domain protein - - - 0.0000000000000000000001412 104.0
MMD1_k127_2975776_0 serine-type endopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001664 289.0
MMD1_k127_2975776_1 MFS/sugar transport protein K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000033 285.0
MMD1_k127_2975776_2 - - - - 0.00000000000000000000000000000000000000000000000000004929 199.0
MMD1_k127_2975776_3 Trypsin-like serine protease - - - 0.00000000000000000000000000000000000000000000004761 181.0
MMD1_k127_2975776_4 succinate dehydrogenase, cytochrome K00241 - - 0.0000000000000000000000000000000000000009819 153.0
MMD1_k127_2975776_5 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0003881 44.0
MMD1_k127_298313_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.671e-196 621.0
MMD1_k127_298313_1 Two component transcriptional regulator, winged helix family K07667,K07668 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 369.0
MMD1_k127_298313_10 - - - - 0.0000000000000000003807 94.0
MMD1_k127_298313_11 PFAM von Willebrand factor type A K07114 - - 0.00002848 47.0
MMD1_k127_298313_2 PFAM sodium calcium exchanger membrane region K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 370.0
MMD1_k127_298313_3 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 342.0
MMD1_k127_298313_4 SMART serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 310.0
MMD1_k127_298313_5 PFAM Diacylglycerol kinase, catalytic - - - 0.000000000000000000000000000000000000000006012 166.0
MMD1_k127_298313_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000005881 148.0
MMD1_k127_298313_7 PFAM Forkhead-associated protein - - - 0.00000000000000000000000000000000000708 144.0
MMD1_k127_298313_8 - - - - 0.00000000000000000000000000034 115.0
MMD1_k127_298313_9 Protein of unknown function (DUF971) - - - 0.000000000000000000000000001557 122.0
MMD1_k127_2987397_0 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 8.602e-218 682.0
MMD1_k127_2987397_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 571.0
MMD1_k127_2987397_2 Bacterial regulatory protein, arsR family - - - 0.00000000001836 68.0
MMD1_k127_2991400_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 310.0
MMD1_k127_2991400_1 Putative ATP-binding cassette K01992 - - 0.00000000000000000000001181 111.0
MMD1_k127_3000136_0 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 410.0
MMD1_k127_3000136_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 376.0
MMD1_k127_3000136_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000004959 237.0
MMD1_k127_3000136_3 acetyltransferase K00950,K03789,K03823 - 2.3.1.128,2.3.1.183,2.7.6.3 0.00000000000000000000000000000000000000001688 167.0
MMD1_k127_3006712_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 6.516e-237 765.0
MMD1_k127_3006712_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 329.0
MMD1_k127_3006712_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000002508 240.0
MMD1_k127_3006712_3 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000147 191.0
MMD1_k127_301597_0 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 296.0
MMD1_k127_301597_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000305 77.0
MMD1_k127_301597_2 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.00000000002429 72.0
MMD1_k127_3020552_0 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000000000000000000001544 222.0
MMD1_k127_3024188_0 PFAM acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 452.0
MMD1_k127_3024188_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 301.0
MMD1_k127_3024188_2 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000000000001047 207.0
MMD1_k127_3024188_3 Cation efflux family - - - 0.0000000000000000000000000000000000000001574 158.0
MMD1_k127_3024188_4 2'-5' RNA ligase superfamily - - - 0.00000000000000000005573 94.0
MMD1_k127_3025212_0 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 292.0
MMD1_k127_3025212_1 aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000511 238.0
MMD1_k127_3025212_2 translation initiation factor activity - - - 0.0000000000000000000000002458 109.0
MMD1_k127_3028613_0 PFAM Translin K07477 - - 0.00000000000000000000000000000000000000000000000000000000000000005607 228.0
MMD1_k127_3028613_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000001553 169.0
MMD1_k127_3028613_2 - - - - 0.0000000000000000002023 93.0
MMD1_k127_3028613_3 Histidine kinase K01768,K12132 - 2.7.11.1,4.6.1.1 0.0000000000000006704 83.0
MMD1_k127_3041991_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 438.0
MMD1_k127_3041991_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 371.0
MMD1_k127_3041991_10 - - - - 0.000000000000000000008984 100.0
MMD1_k127_3041991_2 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 359.0
MMD1_k127_3041991_3 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 314.0
MMD1_k127_3041991_4 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000008444 259.0
MMD1_k127_3041991_5 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000306 179.0
MMD1_k127_3041991_6 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000002601 175.0
MMD1_k127_3041991_7 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.000000000000000000000000000000000000000000003722 171.0
MMD1_k127_3041991_8 Putative membrane peptidase family (DUF2324) - - - 0.00000000000000000000000000000000000000135 159.0
MMD1_k127_3041991_9 PFAM regulatory protein GntR HTH K07979 - - 0.0000000000000000000000000000000000000189 147.0
MMD1_k127_3042506_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 528.0
MMD1_k127_3042506_1 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 324.0
MMD1_k127_3042506_2 Heat shock protein DnaJ domain protein K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000002489 240.0
MMD1_k127_3045431_0 Pyridine nucleotide-disulphide oxidoreductase K21567 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 345.0
MMD1_k127_3045431_1 PFAM Rhomboid family protein K19225 - 3.4.21.105 0.00000000000000000000000000000000000000001273 166.0
MMD1_k127_3045431_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000025 105.0
MMD1_k127_305407_0 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000738 147.0
MMD1_k127_305407_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000005262 59.0
MMD1_k127_3054076_0 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 498.0
MMD1_k127_3054076_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 296.0
MMD1_k127_3054076_2 - - - - 0.00000000000000001217 84.0
MMD1_k127_3054076_3 - - - - 0.0000000679 65.0
MMD1_k127_3065124_0 TPR repeat - - - 0.00004975 54.0
MMD1_k127_3065124_2 - - - - 0.00006198 49.0
MMD1_k127_308212_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 5.03e-214 696.0
MMD1_k127_308212_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 578.0
MMD1_k127_308212_10 Roadblock/LC7 domain K07131 - - 0.00007118 52.0
MMD1_k127_308212_2 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 493.0
MMD1_k127_308212_3 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 305.0
MMD1_k127_308212_4 PFAM YbbR family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001882 262.0
MMD1_k127_308212_5 PFAM ComEC Rec2-related protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000006754 257.0
MMD1_k127_308212_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000009166 184.0
MMD1_k127_308212_7 phosphorelay signal transduction system - - - 0.00000000000000009237 88.0
MMD1_k127_308212_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000002036 64.0
MMD1_k127_3083531_0 protein histidine kinase activity K02484,K07636,K07642 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000000000000008927 126.0
MMD1_k127_3088951_0 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 601.0
MMD1_k127_3088951_1 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 451.0
MMD1_k127_3116498_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000033 222.0
MMD1_k127_3116498_1 Zinc-uptake complex component A periplasmic K09818 - - 0.000000000000000000000000000000000000000000000000000000000000177 223.0
MMD1_k127_3116498_2 PFAM ABC transporter related K09820,K11710 - - 0.00000000000000000000000000000000000000000000000000001582 194.0
MMD1_k127_3116498_3 Haloacid dehalogenase domain protein hydrolase - - - 0.000000000000000000000000000000000000000000000000007121 185.0
MMD1_k127_3116498_4 PFAM SH3 type 3 domain protein - - - 0.0002846 53.0
MMD1_k127_3123798_0 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 457.0
MMD1_k127_3123798_1 nitrite transmembrane transporter activity K02532 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 402.0
MMD1_k127_3123798_2 PFAM UBA THIF-type NAD FAD binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 316.0
MMD1_k127_3123798_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 296.0
MMD1_k127_3129821_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 6.459e-287 887.0
MMD1_k127_3138991_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004801 259.0
MMD1_k127_3138991_1 transmembrane transporter activity - - - 0.0000000000000000000000002797 109.0
MMD1_k127_3141640_0 Polysaccharide biosynthesis protein K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 532.0
MMD1_k127_3141640_1 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001217 271.0
MMD1_k127_3141640_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000007104 108.0
MMD1_k127_3141640_3 Psort location Cytoplasmic, score - - - 0.0000000000000000008908 92.0
MMD1_k127_3141861_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000008167 251.0
MMD1_k127_3141861_1 Two component transcriptional regulator, winged helix family K07667 - - 0.000000000000000000000000003736 115.0
MMD1_k127_3141861_2 Histidine kinase - - - 0.00000000000001271 83.0
MMD1_k127_3142223_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000003488 230.0
MMD1_k127_3142223_1 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000000000000000000000000000000009948 217.0
MMD1_k127_3142223_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000003428 124.0
MMD1_k127_3148499_0 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 325.0
MMD1_k127_3148499_1 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002909 270.0
MMD1_k127_3156547_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003939 255.0
MMD1_k127_3156547_1 Transcriptional regulator of aromatic amino acids metabolism K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000001958 258.0
MMD1_k127_3156547_2 PFAM TadE family protein K12287 - - 0.000000000000000000000000000000003658 146.0
MMD1_k127_3156981_0 HTH-like domain K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 511.0
MMD1_k127_3156981_1 Transposase - - - 0.00000000000000000000000000000000000000001492 155.0
MMD1_k127_3156981_2 HTH-like domain - - - 0.00000000000000000000000000000000000001866 146.0
MMD1_k127_317305_0 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 443.0
MMD1_k127_317305_1 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 313.0
MMD1_k127_317305_10 PFAM Protein kinase domain K08884 - 2.7.11.1 0.0007191 49.0
MMD1_k127_317305_11 PFAM TadE family protein - - - 0.0007723 51.0
MMD1_k127_317305_2 Methionine synthase B12-binding module cap domain protein K00548,K14084 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000008406 214.0
MMD1_k127_317305_3 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000000000000000805 218.0
MMD1_k127_317305_5 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000001092 197.0
MMD1_k127_317305_6 Putative regulatory protein - - - 0.0000000000000000000000000000000000000008321 152.0
MMD1_k127_317305_7 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000001096 145.0
MMD1_k127_317305_8 Putative Flp pilus-assembly TadE/G-like - - - 0.0000221 57.0
MMD1_k127_317305_9 TadE-like protein - - - 0.0000413 53.0
MMD1_k127_3174784_0 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 346.0
MMD1_k127_3174784_1 ABC transporter substrate-binding protein PnrA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 336.0
MMD1_k127_3174784_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000006127 202.0
MMD1_k127_3174784_3 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.00000000000000000000000000000000000000004278 162.0
MMD1_k127_3188501_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 2.03e-251 794.0
MMD1_k127_3196677_0 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 336.0
MMD1_k127_3196677_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 306.0
MMD1_k127_3196677_2 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001269 269.0
MMD1_k127_3196677_3 PFAM Thioredoxin domain K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000177 259.0
MMD1_k127_3196677_4 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000003916 207.0
MMD1_k127_3196677_5 - - - - 0.00000000000000000000000000000000000000000000002891 173.0
MMD1_k127_3196677_6 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000001236 158.0
MMD1_k127_3200555_0 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 430.0
MMD1_k127_3200555_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.00000000000000000000000000000000000007642 145.0
MMD1_k127_3200555_2 serine threonine protein kinase - - - 0.000001112 57.0
MMD1_k127_3226067_0 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000000000000002794 224.0
MMD1_k127_3226067_1 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000005102 149.0
MMD1_k127_3226067_2 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000007134 99.0
MMD1_k127_3228277_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000002507 116.0
MMD1_k127_3228277_1 C4-type zinc ribbon domain K07164 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.00000000000004318 84.0
MMD1_k127_3228277_2 Nacht domain K13730 - - 0.0000000000001392 78.0
MMD1_k127_3240994_0 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000006665 225.0
MMD1_k127_3240994_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000009828 222.0
MMD1_k127_3240994_2 GYD domain - - - 0.00000000000000000000000000000001306 129.0
MMD1_k127_3242494_0 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000002315 271.0
MMD1_k127_3244444_0 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000001665 219.0
MMD1_k127_3244444_1 leucine import across plasma membrane K01997 - - 0.0000000000000000000000000000000000000000003624 164.0
MMD1_k127_3263047_1 Protein of unknown function (DUF433) - - - 0.00000000000000000000000005289 111.0
MMD1_k127_3281978_0 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 380.0
MMD1_k127_3281978_1 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000001165 200.0
MMD1_k127_3281978_2 FAD linked - - - 0.000000000000000000000000000000000001733 143.0
MMD1_k127_3303109_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 379.0
MMD1_k127_3303109_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 333.0
MMD1_k127_3303109_10 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.000002048 56.0
MMD1_k127_3303109_2 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000736 192.0
MMD1_k127_3303109_3 sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000001187 195.0
MMD1_k127_3303109_4 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000001336 173.0
MMD1_k127_3303109_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000001484 145.0
MMD1_k127_3303109_6 Anti-sigma-K factor rskA - - - 0.000000000000000007521 95.0
MMD1_k127_3303109_8 AntiSigma factor - - - 0.0000002999 60.0
MMD1_k127_3328668_0 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 399.0
MMD1_k127_3328668_1 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000001036 165.0
MMD1_k127_3328668_2 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.0000000007284 70.0
MMD1_k127_3328668_3 - - - - 0.000005458 52.0
MMD1_k127_3348380_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 1.094e-232 730.0
MMD1_k127_3348380_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000002838 240.0
MMD1_k127_3369224_0 Stage II sporulation protein E K07315 - 3.1.3.3 0.0000000000000000000000000000000000000817 149.0
MMD1_k127_3369224_1 Transcriptional regulator PadR-like family - - - 0.0000000000000000005066 91.0
MMD1_k127_3369224_2 SMART Elongator protein 3 MiaB NifB K22226 - - 0.00000000000002893 80.0
MMD1_k127_3379771_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 320.0
MMD1_k127_3379771_1 Dolichol kinase - - - 0.00000000000000000000000000000000000000000001811 170.0
MMD1_k127_3384257_0 Glycosyl transferases, related to UDP-glucuronosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000196 245.0
MMD1_k127_3384257_1 methyltransferase K21459 - 2.1.1.301 0.0000000000000000000000000000001575 134.0
MMD1_k127_3384257_2 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000001722 126.0
MMD1_k127_3384257_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000001779 98.0
MMD1_k127_3384257_4 UbiA prenyltransferase family K20616 - - 0.0000000000002513 81.0
MMD1_k127_3390471_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.959e-306 955.0
MMD1_k127_3390471_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000005392 237.0
MMD1_k127_3390471_2 protein methyltransferase activity K11434,K15984,K20421 - 2.1.1.242,2.1.1.303,2.1.1.319 0.000000000000000000000000000000001532 134.0
MMD1_k127_3390471_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000003338 114.0
MMD1_k127_3393473_0 histidine kinase HAMP region domain protein K02484,K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004558 264.0
MMD1_k127_3393473_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004248 238.0
MMD1_k127_3393473_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000009874 219.0
MMD1_k127_3393473_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000009519 135.0
MMD1_k127_3393473_4 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000009349 110.0
MMD1_k127_3393473_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000184 56.0
MMD1_k127_3424563_0 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 376.0
MMD1_k127_345406_0 PFAM Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 377.0
MMD1_k127_345406_1 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00177 - 1.2.7.3 0.0000000000000007364 80.0
MMD1_k127_3457344_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 495.0
MMD1_k127_3457344_1 SNO glutamine amidotransferase family K08681 - 4.3.3.6 0.00000000001409 64.0
MMD1_k127_3473826_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 494.0
MMD1_k127_3473826_1 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 302.0
MMD1_k127_3473826_2 chromosome partitioning K03496 - - 0.00000000000000000000000000000000005879 144.0
MMD1_k127_3473826_3 PFAM phenylalanine histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000004415 124.0
MMD1_k127_3481250_0 membrane K09790 - - 0.00000000000000000000000000000000228 134.0
MMD1_k127_3481250_1 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000006367 114.0
MMD1_k127_3481250_2 ACT domain - - - 0.0001629 52.0
MMD1_k127_350496_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 336.0
MMD1_k127_350496_1 Prenyltransferase and squalene oxidase repeat - - - 0.00000000000000000000000007926 119.0
MMD1_k127_350496_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000004782 63.0
MMD1_k127_3538811_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000001084 198.0
MMD1_k127_3538811_1 COGs COG0647 sugar phosphatase of the HAD superfamily K01101,K02566 - 3.1.3.41 0.00000000000000000000000000000000000000000000000000003214 194.0
MMD1_k127_3570458_0 PFAM DNA methylase N-4 N-6 domain protein K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 446.0
MMD1_k127_3570458_1 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.00000000000002491 74.0
MMD1_k127_3570458_2 chlorophyll binding - - - 0.000000000307 69.0
MMD1_k127_3570458_3 - - - - 0.0000001331 55.0
MMD1_k127_3582215_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 1.592e-225 720.0
MMD1_k127_3582215_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004944 248.0
MMD1_k127_3582215_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000019 205.0
MMD1_k127_3582215_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000004941 98.0
MMD1_k127_3582215_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000001561 99.0
MMD1_k127_3589189_0 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 327.0
MMD1_k127_3589189_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000003419 153.0
MMD1_k127_3589189_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000001951 111.0
MMD1_k127_3595784_0 ferrous iron transmembrane transporter activity K04759 - - 1.444e-227 723.0
MMD1_k127_3595784_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 305.0
MMD1_k127_3595784_2 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.000000000000000000000000000000003367 136.0
MMD1_k127_3595784_4 Lysin motif - - - 0.000006472 55.0
MMD1_k127_3597164_0 UTRA K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003789 261.0
MMD1_k127_3597164_1 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.0000000000000000000000000000000000000000000000001896 184.0
MMD1_k127_360019_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 597.0
MMD1_k127_360019_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000007774 228.0
MMD1_k127_360019_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.0000000000000000000000000000000000000000000000000000000001461 207.0
MMD1_k127_36019_0 PFAM ABC-1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 381.0
MMD1_k127_36019_1 CBS domain - - - 0.0000000000000000000000000007069 119.0
MMD1_k127_36019_2 response regulator K02282,K07705 - - 0.0000000000000000000000001182 110.0
MMD1_k127_36019_3 integral membrane protein - - - 0.000000000000000000005741 98.0
MMD1_k127_36019_4 PFAM Response regulator receiver domain - - - 0.000000000000000001655 96.0
MMD1_k127_36019_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000001487 91.0
MMD1_k127_36019_6 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000005546 87.0
MMD1_k127_36019_7 Protein of unknown function (DUF3309) - - - 0.0000000002398 70.0
MMD1_k127_3641146_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 568.0
MMD1_k127_3641146_1 Glycosyl transferase 4-like K19002 - 2.4.1.337 0.0000000000000000000000000000000000000000000000000000000001402 227.0
MMD1_k127_3641146_2 - - - - 0.00000000000000000005263 95.0
MMD1_k127_3641146_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000004813 70.0
MMD1_k127_3641146_5 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.00001872 47.0
MMD1_k127_3641146_6 DNA helicase K03654 - 3.6.4.12 0.0002932 45.0
MMD1_k127_3647913_0 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 345.0
MMD1_k127_3647913_1 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 315.0
MMD1_k127_3647913_2 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004017 281.0
MMD1_k127_3647913_3 COGs COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000002064 266.0
MMD1_k127_3647913_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000004659 230.0
MMD1_k127_3647913_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000001284 220.0
MMD1_k127_3647913_6 nUDIX hydrolase - - - 0.0000000000000000000000003808 119.0
MMD1_k127_3653355_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 619.0
MMD1_k127_3653355_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 601.0
MMD1_k127_3653355_2 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002459 258.0
MMD1_k127_3653355_3 CpXC protein - - - 0.00000000000000000000000000000000000000000004673 176.0
MMD1_k127_3654812_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.302e-204 646.0
MMD1_k127_3654812_1 Phospholipase K06999 - - 0.00000000000001124 83.0
MMD1_k127_3658339_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 3.449e-212 676.0
MMD1_k127_3658339_1 Belongs to the carbamoyltransferase HypF family K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 317.0
MMD1_k127_3658339_2 Hydrogenase accessory protein HypB K03189,K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000195 260.0
MMD1_k127_3658339_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000002067 220.0
MMD1_k127_3658339_4 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000007685 77.0
MMD1_k127_3658339_5 - - - - 0.00000000000009831 74.0
MMD1_k127_3669042_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000001923 252.0
MMD1_k127_3669042_2 polysaccharide deacetylase K01406 - 3.4.24.40 0.0000000004638 67.0
MMD1_k127_367239_0 PFAM conserved K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 412.0
MMD1_k127_367239_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 386.0
MMD1_k127_367239_2 PFAM zinc finger, SWIM domain protein - - - 0.0000000000000000000000000000009147 124.0
MMD1_k127_367239_3 PFAM amine oxidase - - - 0.0000000000000002256 81.0
MMD1_k127_3673910_0 PFAM Dak phosphatase K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 580.0
MMD1_k127_3673910_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000001153 232.0
MMD1_k127_3673910_2 Uncharacterised protein, DegV family COG1307 - - - 0.00000000000000000000000000000000000003091 157.0
MMD1_k127_3673910_3 EDD domain protein, DegV family - - - 0.0000000000000000000007641 106.0
MMD1_k127_3675350_0 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03546,K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 313.0
MMD1_k127_3675350_1 Rad50 zinc hook motif K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001315 291.0
MMD1_k127_3675350_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000006147 209.0
MMD1_k127_3675350_3 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000000007763 169.0
MMD1_k127_3675350_4 methyltransferase activity K21310 - 2.1.1.334 0.0000000000006942 78.0
MMD1_k127_3681671_0 NAD(P)-binding Rossmann-like domain K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 339.0
MMD1_k127_3681671_1 PFAM molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000002618 224.0
MMD1_k127_3681671_2 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000001053 177.0
MMD1_k127_3688283_0 beta-galactosidase activity K12308 - 3.2.1.23 0.0000000006383 72.0
MMD1_k127_3695956_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 596.0
MMD1_k127_3695956_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 533.0
MMD1_k127_3695956_2 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00821,K05830,K09251 - 2.6.1.11,2.6.1.17,2.6.1.82 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 393.0
MMD1_k127_3698182_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000343 136.0
MMD1_k127_3698182_1 Cyclophilin-like K09143 - - 0.0000000000000000000000000000002177 128.0
MMD1_k127_3698182_2 catechol 1,2-dioxygenase - - - 0.0007783 46.0
MMD1_k127_3701010_0 malic protein domain protein K00027,K00029 - 1.1.1.38,1.1.1.40 2.67e-290 911.0
MMD1_k127_3701010_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000002256 217.0
MMD1_k127_3701010_2 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.0000000000000000000000000000000000000003476 158.0
MMD1_k127_3701010_3 Copper binding proteins, plastocyanin/azurin family - - - 0.000000001621 64.0
MMD1_k127_3701010_4 PFAM NUDIX hydrolase K03574 - 3.6.1.55 0.000000004149 59.0
MMD1_k127_3702405_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 503.0
MMD1_k127_3702405_1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007715 443.0
MMD1_k127_3702405_2 phosphoglycerate mutase K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098 449.0
MMD1_k127_3702405_3 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 441.0
MMD1_k127_3702405_4 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 342.0
MMD1_k127_3702405_5 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 324.0
MMD1_k127_3702405_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004135 246.0
MMD1_k127_3702405_7 c-1-tetrahydrofolate synthase K00288 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0017076,GO:0017144,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.5,3.5.4.9,6.3.4.3 0.00000000000000005157 80.0
MMD1_k127_3707999_0 sh3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000007742 239.0
MMD1_k127_3707999_1 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000000000000003003 141.0
MMD1_k127_3707999_2 Type IV pilus biogenesis stability protein PilW - - - 0.0000439 46.0
MMD1_k127_3713054_0 Peptidase MA superfamily - - - 0.0000000000000000000000000000000006317 147.0
MMD1_k127_3713054_2 - - - - 0.00000001531 66.0
MMD1_k127_3722404_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000001727 227.0
MMD1_k127_3722404_1 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.000000000000000000000000000000000000000000000000001513 184.0
MMD1_k127_3722404_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000001292 173.0
MMD1_k127_3735340_0 protein deglycation - - - 4.177e-279 865.0
MMD1_k127_3735340_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01576 - 4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 443.0
MMD1_k127_3735340_2 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.00000000000000000000000000000000000000000000000000000000001468 210.0
MMD1_k127_3735340_3 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000003686 207.0
MMD1_k127_374126_0 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 573.0
MMD1_k127_374126_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 515.0
MMD1_k127_374126_2 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 348.0
MMD1_k127_374126_3 TIGRFAM F420-dependent oxidoreductase K12234 - 6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
MMD1_k127_374126_4 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000002563 258.0
MMD1_k127_374126_5 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000001081 213.0
MMD1_k127_374126_6 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.00000000000000000000000000000000000000005208 163.0
MMD1_k127_374126_7 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.00000000000000000000000000001461 122.0
MMD1_k127_374126_8 Thioesterase superfamily - - - 0.000000000000000000000004073 108.0
MMD1_k127_3752473_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1157.0
MMD1_k127_3755071_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 376.0
MMD1_k127_3755071_1 Inositol monophosphatase family K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000002475 121.0
MMD1_k127_3773041_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 475.0
MMD1_k127_3773041_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003242 280.0
MMD1_k127_3773041_2 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001268 271.0
MMD1_k127_3773041_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000002888 217.0
MMD1_k127_3773041_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000003127 189.0
MMD1_k127_3789615_0 ABC transporter, transmembrane region K06147 - - 3.205e-213 679.0
MMD1_k127_3789615_1 PFAM ABC transporter transmembrane region - - - 1.484e-207 688.0
MMD1_k127_3789615_2 Beta-eliminating lyase - - - 2.167e-203 642.0
MMD1_k127_3789615_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 500.0
MMD1_k127_3789615_4 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 342.0
MMD1_k127_3789615_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000004362 139.0
MMD1_k127_3789615_6 Cytochrome c - - - 0.0000000000000000003418 100.0
MMD1_k127_3789615_7 Protein of unknown function (DUF3341) - - - 0.000000000000000003511 99.0
MMD1_k127_3789615_8 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000002419 62.0
MMD1_k127_3789615_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00001497 57.0
MMD1_k127_3803944_0 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 422.0
MMD1_k127_3803944_1 PFAM dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 315.0
MMD1_k127_3803944_2 - - - - 0.000000000000000000000000000000000000000002754 156.0
MMD1_k127_3803944_3 translation initiation factor activity K06996 - - 0.00000000000000000000000000002368 123.0
MMD1_k127_3822517_0 carbon starvation protein CstA K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 412.0
MMD1_k127_3822517_1 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 310.0
MMD1_k127_3822517_2 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000007008 166.0
MMD1_k127_3822517_3 - - - - 0.0000000000000000000000000000000007235 134.0
MMD1_k127_3822517_4 - - - - 0.0000000000000000000007986 102.0
MMD1_k127_3822517_5 - - - - 0.000000000004636 74.0
MMD1_k127_3842151_0 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 372.0
MMD1_k127_3856071_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 338.0
MMD1_k127_3856071_1 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 334.0
MMD1_k127_3856071_2 Beta-lactamase superfamily domain K03476 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 317.0
MMD1_k127_3856071_3 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000000000000000000000000001566 230.0
MMD1_k127_3856071_4 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000001964 196.0
MMD1_k127_3856071_5 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000003078 184.0
MMD1_k127_3866502_0 PFAM VanW family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 590.0
MMD1_k127_3866502_1 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000000000000000000007081 108.0
MMD1_k127_3866502_2 domain, Protein - - - 0.000000000000003607 86.0
MMD1_k127_3875968_0 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) K01126,K10716 - 3.1.4.46 1.081e-210 675.0
MMD1_k127_3875968_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000003488 249.0
MMD1_k127_3875968_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000003649 89.0
MMD1_k127_3888080_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1235.0
MMD1_k127_3888080_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000001763 64.0
MMD1_k127_3913319_0 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001285 264.0
MMD1_k127_3913319_1 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000001929 234.0
MMD1_k127_3913319_2 REDY-like protein HapK - - - 0.000000000447 66.0
MMD1_k127_3913319_3 REDY-like protein HapK - - - 0.0000003988 56.0
MMD1_k127_3926570_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000009816 179.0
MMD1_k127_3926570_1 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000006502 119.0
MMD1_k127_3928130_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 496.0
MMD1_k127_3934519_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1029.0
MMD1_k127_3934519_1 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 4.45e-199 637.0
MMD1_k127_3934519_2 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 500.0
MMD1_k127_3934519_3 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000001979 222.0
MMD1_k127_3934519_4 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000008727 136.0
MMD1_k127_3934519_5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000000000000004977 138.0
MMD1_k127_3944754_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3 1.085e-265 841.0
MMD1_k127_3944754_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 435.0
MMD1_k127_3944754_2 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000005224 201.0
MMD1_k127_3957455_0 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000001649 151.0
MMD1_k127_3961335_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 460.0
MMD1_k127_3961335_1 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 315.0
MMD1_k127_3961335_2 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000008903 168.0
MMD1_k127_3961335_3 - - - - 0.0000000000000000000000000000000004504 150.0
MMD1_k127_3961335_5 Belongs to the UPF0127 family K09005 - - 0.0000001995 58.0
MMD1_k127_3965268_0 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000000000000000000002297 112.0
MMD1_k127_3977401_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 524.0
MMD1_k127_3977401_1 formate dehydrogenase (NAD+) activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 298.0
MMD1_k127_3977401_2 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000006466 235.0
MMD1_k127_3977401_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000004666 218.0
MMD1_k127_3977401_4 Molybdopterin oxidoreductase, Fe4S4 K00123,K05299 - 1.17.1.10,1.17.1.9 0.0000000000000000000000000000000000001847 149.0
MMD1_k127_4000714_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.236e-275 854.0
MMD1_k127_4000714_1 PFAM amidohydrolase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 539.0
MMD1_k127_4000714_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000005895 63.0
MMD1_k127_4000714_3 PspC domain K03973 - - 0.000000002832 63.0
MMD1_k127_4000714_4 Major Facilitator Superfamily - - - 0.0000001587 55.0
MMD1_k127_4001529_0 ATPase AAA-2 domain protein K03696 - - 0.0 1039.0
MMD1_k127_4001529_1 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 350.0
MMD1_k127_4001529_2 mRNA catabolic process K06950 - - 0.00000000000000000000000000000000000000000000000000002044 194.0
MMD1_k127_4001529_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000004187 177.0
MMD1_k127_4001529_4 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.000000000000000000000006727 101.0
MMD1_k127_40209_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 491.0
MMD1_k127_40209_1 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 433.0
MMD1_k127_40209_2 PFAM ABC transporter related K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 295.0
MMD1_k127_40209_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000005275 115.0
MMD1_k127_40209_4 PKD domain - - - 0.00000000000001469 87.0
MMD1_k127_40209_5 - - - - 0.00000000062 64.0
MMD1_k127_40209_6 Tfp pilus assembly protein FimV - - - 0.000000001228 69.0
MMD1_k127_4037608_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 564.0
MMD1_k127_4037608_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 435.0
MMD1_k127_4037608_2 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 329.0
MMD1_k127_4037608_3 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 306.0
MMD1_k127_4037608_4 ABC transporter K01990,K13926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
MMD1_k127_4037608_5 PFAM secretion protein HlyD family protein K01993 - - 0.00000000000000000000000000000000000000004357 167.0
MMD1_k127_4037608_6 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000001296 128.0
MMD1_k127_4037608_7 transcriptional regulator - - - 0.00000000000000000000000000713 119.0
MMD1_k127_4079173_0 transposase IS116 IS110 IS902 family protein K07486 - - 0.0000000000000000000000000000000000000000000000000000000000003496 225.0
MMD1_k127_4079173_1 Histidine ammonia-lyase K01745 GO:0003674,GO:0003824,GO:0004397,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.3.1.3 0.00000000000001168 76.0
MMD1_k127_4080267_0 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 299.0
MMD1_k127_4080267_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.00000000000000000000000000000000000214 143.0
MMD1_k127_4084744_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 498.0
MMD1_k127_4084744_1 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003264 208.0
MMD1_k127_4084744_2 SMART helix-turn-helix domain protein K15539 - - 0.0000000000000000000000000000000000000000242 164.0
MMD1_k127_4084744_3 acetyltransferase K03789 - 2.3.1.128 0.00000006964 54.0
MMD1_k127_4092729_0 PFAM type II secretion system - - - 0.000000000000000000000000000003028 130.0
MMD1_k127_4092729_1 PFAM Bacterial type II secretion system protein F domain K12510 - - 0.0000000000000000000000000001023 129.0
MMD1_k127_4092729_2 Secretion system protein K02283 - - 0.00000001433 58.0
MMD1_k127_410448_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.413e-275 862.0
MMD1_k127_4122554_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 4.481e-201 639.0
MMD1_k127_4122554_1 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.000000000000000000000001562 111.0
MMD1_k127_4122554_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000006024 96.0
MMD1_k127_4125213_0 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 355.0
MMD1_k127_4125213_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003211 287.0
MMD1_k127_4133286_0 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000002778 185.0
MMD1_k127_4133286_1 Helix-turn-helix - - - 0.000000000000000000000000000000000000000000004311 170.0
MMD1_k127_4133286_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000007736 103.0
MMD1_k127_4133286_3 - - - - 0.00000000000000006349 90.0
MMD1_k127_4133286_4 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000449 80.0
MMD1_k127_4173495_0 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000007189 195.0
MMD1_k127_4173495_1 gluconolactonase K01053,K14274 - 3.1.1.17 0.000000000000000000000000000000000000000000000002272 175.0
MMD1_k127_4190377_0 cellulose binding - - - 1.025e-209 655.0
MMD1_k127_4190377_1 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 585.0
MMD1_k127_4190377_2 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 568.0
MMD1_k127_4190377_3 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007952 497.0
MMD1_k127_4190377_4 maltose binding K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 485.0
MMD1_k127_4190377_5 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 398.0
MMD1_k127_4190377_6 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 350.0
MMD1_k127_4190377_7 PFAM ROK family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 333.0
MMD1_k127_4190377_8 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 297.0
MMD1_k127_4190377_9 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000006974 136.0
MMD1_k127_4190423_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000842 180.0
MMD1_k127_4190423_1 nitric oxide dioxygenase activity K17247 - - 0.000000000000000000000000008089 119.0
MMD1_k127_419227_0 PFAM glycosyl transferase, family 51 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 516.0
MMD1_k127_420144_0 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 334.0
MMD1_k127_422754_0 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009708 611.0
MMD1_k127_424115_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001868 236.0
MMD1_k127_424115_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000003499 199.0
MMD1_k127_424115_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000001328 87.0
MMD1_k127_4248325_0 FAD dependent oxidoreductase central domain - - - 9.328e-284 895.0
MMD1_k127_4248325_1 Choline/ethanolamine kinase - - - 0.0000000000000000000000000000000000000000003597 170.0
MMD1_k127_424990_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 311.0
MMD1_k127_424990_1 PFAM fumarate lyase K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 296.0
MMD1_k127_424990_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000102 265.0
MMD1_k127_424990_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001286 218.0
MMD1_k127_424990_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000001278 201.0
MMD1_k127_4258221_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 398.0
MMD1_k127_4258221_1 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000126 173.0
MMD1_k127_4258221_2 Aminoacyl-tRNA editing domain - - - 0.000000000000000000000000000000000000000004938 159.0
MMD1_k127_4258221_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000006222 148.0
MMD1_k127_4258221_4 carboxylic ester hydrolase activity - - - 0.00000001047 66.0
MMD1_k127_4258221_5 Periplasmic component of the Tol biopolymer transport system - - - 0.0001567 53.0
MMD1_k127_4279840_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000153 265.0
MMD1_k127_4283112_0 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000000000000001634 220.0
MMD1_k127_4283112_1 - - - - 0.00000000000000000000000000000000000000000000000000000008223 201.0
MMD1_k127_4346526_0 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 437.0
MMD1_k127_4346526_1 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 416.0
MMD1_k127_4346526_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 321.0
MMD1_k127_4346526_3 3-deoxy-manno-octulosonate-8-phosphatase activity K00983,K03270 - 2.7.7.43,3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003849 286.0
MMD1_k127_4346526_4 Sulfotransferase domain - - - 0.00000000000002077 85.0
MMD1_k127_4346526_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000007085 55.0
MMD1_k127_435224_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 370.0
MMD1_k127_4373348_0 Required for chromosome condensation and partitioning K03529 - - 2.25e-231 761.0
MMD1_k127_4373348_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 429.0
MMD1_k127_4373348_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000002897 271.0
MMD1_k127_4373348_3 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000046 264.0
MMD1_k127_4373348_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000227 256.0
MMD1_k127_4373348_5 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000002382 254.0
MMD1_k127_4373348_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000006744 181.0
MMD1_k127_4373348_7 lysyltransferase activity K07027 - - 0.00000000000000000000000004148 114.0
MMD1_k127_4373348_8 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000000000001131 83.0
MMD1_k127_4373348_9 Septum formation initiator - - - 0.0000000000008865 73.0
MMD1_k127_4378976_0 Extracellular solute-binding protein K02055,K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 547.0
MMD1_k127_4378976_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 415.0
MMD1_k127_4378976_2 Extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 400.0
MMD1_k127_4378976_3 ABC-type spermidine putrescine transport system, permease component I K02054,K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 315.0
MMD1_k127_4378976_4 PFAM binding-protein-dependent transport systems inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 294.0
MMD1_k127_4378976_5 TOBE domain K02052,K11072 - 3.6.3.31 0.0000000000000000000000004644 111.0
MMD1_k127_4378976_6 molybdopterin biosynthesis MoaE K03635,K21142 - 2.8.1.12 0.00000001304 59.0
MMD1_k127_4378976_7 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000001232 50.0
MMD1_k127_4380072_0 Protein of unknown function (DUF554) K07150 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007757 262.0
MMD1_k127_4380072_1 Hydrolase, alpha beta domain protein K01048 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000004625 261.0
MMD1_k127_4380072_2 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000007582 158.0
MMD1_k127_4380072_3 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000001446 106.0
MMD1_k127_4380072_4 Histidine kinase - - - 0.000000000000000000001013 101.0
MMD1_k127_4380072_5 Response regulator receiver domain protein - - - 0.00000000000000000003138 96.0
MMD1_k127_4380072_6 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000395 46.0
MMD1_k127_4380072_7 - - - - 0.0001846 49.0
MMD1_k127_4384104_0 PFAM binding-protein-dependent transport systems inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 319.0
MMD1_k127_4384104_1 DNA import into cell involved in transformation K02053,K11070 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0016020,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071705,GO:0071944,GO:0098657 - 0.00000000000000000000000000000000000000003334 158.0
MMD1_k127_4386266_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 496.0
MMD1_k127_4386266_1 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 476.0
MMD1_k127_4386266_2 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 453.0
MMD1_k127_4391722_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 311.0
MMD1_k127_4391722_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000005558 265.0
MMD1_k127_4391722_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000002725 250.0
MMD1_k127_4391722_3 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002065 228.0
MMD1_k127_4391722_4 PFAM Roadblock LC7 family protein K07131 - - 0.00000000000000000000000000000000000000000000000001235 183.0
MMD1_k127_4391722_5 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000004991 183.0
MMD1_k127_4391722_6 involved in lipopolysaccharide - - - 0.0000000000000000000000000000002641 134.0
MMD1_k127_4391722_7 Cell envelope-related transcriptional attenuator domain - - - 0.00000000000000000000000000004075 130.0
MMD1_k127_4391722_8 4-vinyl reductase, 4VR - - - 0.0000000000000002915 87.0
MMD1_k127_4396885_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 467.0
MMD1_k127_4396885_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 387.0
MMD1_k127_4396885_2 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.000000000000000000000000000000000000000003812 163.0
MMD1_k127_4396885_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000007532 91.0
MMD1_k127_4402740_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 554.0
MMD1_k127_4402740_1 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 429.0
MMD1_k127_4402740_2 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 342.0
MMD1_k127_4402740_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000001698 136.0
MMD1_k127_4411684_0 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 1.626e-249 783.0
MMD1_k127_4411684_1 Amidohydrolase family - - - 4.511e-203 642.0
MMD1_k127_4411684_10 Putative zinc-finger - - - 0.0006055 49.0
MMD1_k127_4411684_2 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004761 594.0
MMD1_k127_4411684_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 411.0
MMD1_k127_4411684_4 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 399.0
MMD1_k127_4411684_5 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 355.0
MMD1_k127_4411684_6 UTRA K03710 - - 0.000000000000000000000000000000000000000000000001929 192.0
MMD1_k127_4411684_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000004274 122.0
MMD1_k127_4411684_8 metallocarboxypeptidase activity K14054 - - 0.0000000000000000000000002159 117.0
MMD1_k127_4433726_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 609.0
MMD1_k127_4436443_0 PFAM secretion protein HlyD family protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 360.0
MMD1_k127_4436443_1 glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 296.0
MMD1_k127_4436443_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000001842 180.0
MMD1_k127_443742_0 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000003926 264.0
MMD1_k127_443742_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000008187 244.0
MMD1_k127_443742_2 NmrA-like family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000091 193.0
MMD1_k127_443742_4 Zinc-binding dehydrogenase - - - 0.000000002251 59.0
MMD1_k127_4463180_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 473.0
MMD1_k127_4463180_1 Domain present in PSD-95, Dlg, and ZO-1/2. K04771,K08070 - 1.3.1.74,3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 312.0
MMD1_k127_4463180_2 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000006147 209.0
MMD1_k127_4463180_3 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000001682 94.0
MMD1_k127_4463180_4 Lipid kinase - - - 0.000000000000000003324 87.0
MMD1_k127_446332_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007734 284.0
MMD1_k127_4463814_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1263.0
MMD1_k127_4463814_1 PFAM ABC transporter related K06147 - - 5.843e-232 732.0
MMD1_k127_4463814_2 8-amino-7-oxononanoate synthase activity K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 540.0
MMD1_k127_4463814_3 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000006103 254.0
MMD1_k127_4463814_4 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000001228 213.0
MMD1_k127_4463814_5 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000001117 212.0
MMD1_k127_4463814_9 helix_turn_helix multiple antibiotic resistance protein K18906 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000009684 56.0
MMD1_k127_4464943_0 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000002276 244.0
MMD1_k127_4464943_1 Carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000009056 180.0
MMD1_k127_4464943_2 - - - - 0.00000000000000000000000003667 118.0
MMD1_k127_4464943_3 - - - - 0.00000000000000000000000007949 116.0
MMD1_k127_4464943_4 - - - - 0.000000001622 61.0
MMD1_k127_447798_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002722 282.0
MMD1_k127_4508940_0 AcrB/AcrD/AcrF family K03296,K07788,K07789,K18138 - - 2.967e-216 675.0
MMD1_k127_4518600_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 541.0
MMD1_k127_4518600_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 465.0
MMD1_k127_4518600_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 430.0
MMD1_k127_4518600_3 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 407.0
MMD1_k127_4518600_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 384.0
MMD1_k127_4518600_5 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000002996 233.0
MMD1_k127_4521445_0 Zn-dependent proteases and their inactivated homologs K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 359.0
MMD1_k127_4521445_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 352.0
MMD1_k127_4521445_2 PFAM Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000005854 233.0
MMD1_k127_4521445_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000002324 134.0
MMD1_k127_4521445_4 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000002754 104.0
MMD1_k127_4521445_5 ribosomal protein L28 K02902 - - 0.000000000000000009307 87.0
MMD1_k127_4529553_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000003817 244.0
MMD1_k127_4529553_1 - - - - 0.00000000002077 74.0
MMD1_k127_4532599_0 PFAM transposase, IS4 family protein - - - 6.844e-209 657.0
MMD1_k127_4532599_1 Transposase DDE domain K07481 - - 0.00000000001512 67.0
MMD1_k127_4545712_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 606.0
MMD1_k127_4545712_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 353.0
MMD1_k127_4545712_2 amino acid activation for nonribosomal peptide biosynthetic process K14379 - 3.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 321.0
MMD1_k127_4545712_3 domain, Protein K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000005798 252.0
MMD1_k127_4545712_4 Peptidase family M23 K08642 - - 0.0000000000000000000000000000000002423 153.0
MMD1_k127_4545712_5 Peptidoglycan-binding domain 1 protein K01233,K21449 - 3.2.1.132 0.00000000000000000000000000009049 136.0
MMD1_k127_4549384_0 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002882 295.0
MMD1_k127_4549384_1 phosphorelay signal transduction system K07670 - - 0.00000000000000000000000000000000000000005731 153.0
MMD1_k127_4549904_0 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 574.0
MMD1_k127_4549904_1 Acetylornithine deacetylase K01438 - 3.5.1.16 0.000000000000000000006194 94.0
MMD1_k127_4552485_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001043 274.0
MMD1_k127_4552485_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000002674 220.0
MMD1_k127_4552485_2 ferrous iron binding K06990,K09141 - - 0.00000000000000000000000000000000000000000000000000008593 193.0
MMD1_k127_4552485_3 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000000000001517 138.0
MMD1_k127_4552485_4 Thiopurine S-methyltransferase (TPMT) - - - 0.0000000000000000000000000000000001562 140.0
MMD1_k127_4556670_0 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 338.0
MMD1_k127_4556670_1 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 327.0
MMD1_k127_4556670_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000009072 156.0
MMD1_k127_4556670_3 organic phosphonate transmembrane transporter activity K02042 - - 0.0000000000000086 86.0
MMD1_k127_4562485_0 ferredoxin oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 440.0
MMD1_k127_4562485_1 Pyridine nucleotide-disulphide oxidoreductase K00390,K00441,K03388,K14121,K16886,K22174,K22480 - 1.1.98.4,1.12.98.1,1.8.4.10,1.8.4.8,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 403.0
MMD1_k127_4562485_2 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 335.0
MMD1_k127_4562485_3 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000007075 169.0
MMD1_k127_4562485_4 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.00005418 46.0
MMD1_k127_4568914_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 594.0
MMD1_k127_4568914_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 520.0
MMD1_k127_4568914_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 452.0
MMD1_k127_4568914_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K12370 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006782 258.0
MMD1_k127_4581000_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 473.0
MMD1_k127_4581000_1 Serine Threonine protein kinase - - - 0.000000000000000000000000000000000000000000006394 174.0
MMD1_k127_4581000_2 aconitase subunit 2 K09128 - - 0.00000000000000000000000002878 113.0
MMD1_k127_4588442_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 496.0
MMD1_k127_459615_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001471 212.0
MMD1_k127_459615_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000001158 67.0
MMD1_k127_4598278_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 448.0
MMD1_k127_4598278_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000004151 243.0
MMD1_k127_4598278_2 Tetratricopeptide repeat - - - 0.0003627 47.0
MMD1_k127_4621242_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 372.0
MMD1_k127_4621242_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000001961 116.0
MMD1_k127_4627293_0 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 340.0
MMD1_k127_4647640_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000006641 209.0
MMD1_k127_4647640_1 rRNA (guanine-N2-)-methyltransferase activity K08316,K15257 - 2.1.1.171 0.00000000000000041 83.0
MMD1_k127_4650521_0 CoA-ligase K02381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 537.0
MMD1_k127_4650521_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001027 274.0
MMD1_k127_4657225_0 Heat shock 70 kDa protein K04043 - - 2.551e-299 930.0
MMD1_k127_4657225_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009668 479.0
MMD1_k127_4657225_10 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000001913 151.0
MMD1_k127_4657225_11 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000003374 139.0
MMD1_k127_4657225_12 Thioredoxin K03671 - - 0.000000000000000000000000000005083 122.0
MMD1_k127_4657225_13 - - - - 0.0000000000000000002823 94.0
MMD1_k127_4657225_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 472.0
MMD1_k127_4657225_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 406.0
MMD1_k127_4657225_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 377.0
MMD1_k127_4657225_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 363.0
MMD1_k127_4657225_6 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 319.0
MMD1_k127_4657225_7 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000002477 197.0
MMD1_k127_4657225_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000007274 168.0
MMD1_k127_4657225_9 - - - - 0.000000000000000000000000000000000000000007324 158.0
MMD1_k127_4660934_0 FAD dependent oxidoreductase - - - 1.715e-197 630.0
MMD1_k127_4660934_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 353.0
MMD1_k127_4660934_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000618 95.0
MMD1_k127_4664172_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847,K01848 - 5.4.99.2 1.577e-250 788.0
MMD1_k127_4664172_1 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 1.036e-203 639.0
MMD1_k127_4664172_2 acetyl-CoA carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 569.0
MMD1_k127_4664172_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000212 185.0
MMD1_k127_4664172_4 CYTH domain K05873 - 4.6.1.1 0.00000000000000000000000000000000000001688 153.0
MMD1_k127_4664172_5 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.00000000000000000000000000000001775 132.0
MMD1_k127_4664172_6 polysaccharide catabolic process K05991 - 3.2.1.123 0.00000000000000000000000004584 111.0
MMD1_k127_4667942_0 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 469.0
MMD1_k127_4667942_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 440.0
MMD1_k127_4667942_2 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 326.0
MMD1_k127_4667942_3 CobQ/CobB/MinD/ParA nucleotide binding domain K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001813 277.0
MMD1_k127_4667942_4 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000006641 187.0
MMD1_k127_4667942_5 hydrogenase expression formation protein HypE K04655 - - 0.000000001039 59.0
MMD1_k127_4667942_6 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000003017 59.0
MMD1_k127_4671269_0 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 504.0
MMD1_k127_4672458_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 377.0
MMD1_k127_4672458_1 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000002513 183.0
MMD1_k127_4672458_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00177 - 1.2.7.1,1.2.7.3 0.000000000000000000000000000000000000003498 150.0
MMD1_k127_4674055_0 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007637 278.0
MMD1_k127_4674055_1 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000002068 228.0
MMD1_k127_4687842_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1080.0
MMD1_k127_4687842_1 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 600.0
MMD1_k127_4687842_2 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 436.0
MMD1_k127_4687842_3 molybdenum cofactor K03638,K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000005742 189.0
MMD1_k127_4687842_4 GCN5 family acetyltransferase K22477 - 2.3.1.1 0.00000000000000000000000000000000001477 140.0
MMD1_k127_4687842_5 PFAM cyclic nucleotide-binding - - - 0.000000000000000000000001888 115.0
MMD1_k127_4687842_6 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.00000000000000000000001926 104.0
MMD1_k127_4687842_7 response regulator K03413,K07719 - - 0.00000000000000000000008488 103.0
MMD1_k127_4687842_8 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000001821 99.0
MMD1_k127_4702293_0 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 417.0
MMD1_k127_4702293_1 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000004068 270.0
MMD1_k127_4713110_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 372.0
MMD1_k127_472060_0 Formiminotransferase domain, N-terminal subdomain K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000005162 235.0
MMD1_k127_472060_1 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000002946 230.0
MMD1_k127_4728577_0 Domain of unknown function (DUF4347) - - - 0.00000000000000000000000000000835 133.0
MMD1_k127_4728577_1 Lamin Tail Domain - - - 0.0000000000003132 81.0
MMD1_k127_4739209_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.132e-297 923.0
MMD1_k127_4739209_1 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000003473 234.0
MMD1_k127_4739209_2 Putative carbohydrate binding domain K00702 - 2.4.1.20 0.00000003725 57.0
MMD1_k127_4749653_0 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000642 232.0
MMD1_k127_4749653_1 methyltransferase activity - - - 0.000000000000000005327 95.0
MMD1_k127_4785239_0 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000122 148.0
MMD1_k127_4785239_1 PFAM peptidase S58, DmpA - - - 0.00000000000000000000000000000000001002 139.0
MMD1_k127_4811249_0 Magnesium chelatase, subunit ChlI C-terminal K06400,K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 329.0
MMD1_k127_4811800_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 578.0
MMD1_k127_4811800_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000191 254.0
MMD1_k127_4811800_2 2Fe-2S -binding domain protein K00256,K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000009811 215.0
MMD1_k127_4811800_3 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000002886 198.0
MMD1_k127_4811800_4 serine threonine protein phosphatase K20074 - 3.1.3.16 0.0000000000000000000000001825 123.0
MMD1_k127_4811800_5 Forkhead associated domain - - - 0.000000002558 71.0
MMD1_k127_4811800_6 protein secretion by the type VII secretion system - - - 0.000000005747 65.0
MMD1_k127_4811800_7 von Willebrand factor (vWF) type A domain K07114 - - 0.00000004854 65.0
MMD1_k127_4811800_8 FHA domain K07169,K11894,K11913 - - 0.000000848 63.0
MMD1_k127_4818145_0 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 473.0
MMD1_k127_4818145_2 radical SAM domain protein - - - 0.000000000000000002997 98.0
MMD1_k127_483249_0 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 381.0
MMD1_k127_483249_1 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000002792 175.0
MMD1_k127_483249_2 - - - - 0.0000000000000000000000000000000000000000002895 171.0
MMD1_k127_483249_3 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000336 154.0
MMD1_k127_4846840_1 PFAM TadE family protein - - - 0.0000004912 59.0
MMD1_k127_4849180_0 PFAM Cytochrome C assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 335.0
MMD1_k127_4849180_1 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000004239 206.0
MMD1_k127_4849180_2 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000002878 196.0
MMD1_k127_4849180_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000001018 202.0
MMD1_k127_4849180_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000009536 82.0
MMD1_k127_4855435_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 447.0
MMD1_k127_4855435_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 299.0
MMD1_k127_4855435_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000002245 182.0
MMD1_k127_4855435_3 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000002381 104.0
MMD1_k127_4863434_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000004675 213.0
MMD1_k127_4863434_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000001447 145.0
MMD1_k127_4882362_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 295.0
MMD1_k127_4882362_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004311 239.0
MMD1_k127_4893531_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001852 215.0
MMD1_k127_4893531_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000007723 209.0
MMD1_k127_4893531_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002165 208.0
MMD1_k127_4893531_3 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000008653 144.0
MMD1_k127_4893531_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001097 139.0
MMD1_k127_4893531_5 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000001798 100.0
MMD1_k127_4893531_6 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000008742 67.0
MMD1_k127_48943_0 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 332.0
MMD1_k127_48943_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002387 295.0
MMD1_k127_48943_2 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000001243 246.0
MMD1_k127_4901841_0 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 7.907e-301 938.0
MMD1_k127_4901841_1 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 297.0
MMD1_k127_4901841_2 TrkA-N domain K03499,K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004616 252.0
MMD1_k127_4901841_3 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000000000000000000000006541 221.0
MMD1_k127_4901841_4 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000004694 152.0
MMD1_k127_4901841_5 cell envelope-related transcriptional attenuator - - - 0.000000000000000000000000000000000003015 156.0
MMD1_k127_4901841_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000005667 115.0
MMD1_k127_4931791_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 515.0
MMD1_k127_4931791_1 Dolichyl-phosphate-mannose-protein mannosyltransferase K14340 - - 0.000000000009643 71.0
MMD1_k127_4981885_0 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 368.0
MMD1_k127_4981885_1 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000002677 192.0
MMD1_k127_4981885_2 acetyltransferase K06889,K19273 - - 0.00000000000000000000000000000000003596 140.0
MMD1_k127_4981885_3 - - - - 0.0000000000000000000000009006 112.0
MMD1_k127_5013878_0 N-terminal 7TM region of histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 450.0
MMD1_k127_502061_0 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 371.0
MMD1_k127_502061_1 ATP:ADP antiporter activity K15762 - - 0.0000000000000000000000005222 123.0
MMD1_k127_502061_2 cyclic nucleotide binding K04739,K10914 - - 0.00000000003169 78.0
MMD1_k127_5028014_0 succinyl-diaminopimelate desuccinylase activity K01439 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 0.0 1087.0
MMD1_k127_5028014_1 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 464.0
MMD1_k127_5028014_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000001199 208.0
MMD1_k127_5039700_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 534.0
MMD1_k127_5039700_1 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 358.0
MMD1_k127_5039700_2 lysyltransferase activity K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000001014 242.0
MMD1_k127_5039700_4 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000006848 203.0
MMD1_k127_5039700_5 - - - - 0.00000000000000000000000000000000000000000000000000000007649 214.0
MMD1_k127_5039811_0 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005734 274.0
MMD1_k127_5039811_1 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000002289 224.0
MMD1_k127_5070594_0 Belongs to the peptidase S41A family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003356 289.0
MMD1_k127_5074185_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 381.0
MMD1_k127_5074185_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002667 244.0
MMD1_k127_5074185_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000008851 162.0
MMD1_k127_5074185_3 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000001297 96.0
MMD1_k127_5074185_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000001306 66.0
MMD1_k127_5074185_5 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000001096 61.0
MMD1_k127_5079608_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 1.379e-291 904.0
MMD1_k127_5079608_1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0000000000000000000000000000001879 126.0
MMD1_k127_5079608_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000001054 86.0
MMD1_k127_5081101_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 402.0
MMD1_k127_5081101_1 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000001392 243.0
MMD1_k127_5081101_2 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000005652 239.0
MMD1_k127_509301_0 SMART alpha amylase catalytic sub domain K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 492.0
MMD1_k127_509301_1 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 310.0
MMD1_k127_5101020_0 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 296.0
MMD1_k127_5101020_1 COG3001 Fructosamine-3-kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 298.0
MMD1_k127_5101020_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000541 157.0
MMD1_k127_5101020_3 PFAM glycine cleavage T protein (aminomethyl transferase) K00605 - 2.1.2.10 0.00000000000000000000000000000000000000007535 172.0
MMD1_k127_5101020_4 saccharopine dehydrogenase activity K19064 - 1.4.1.18 0.000002321 50.0
MMD1_k127_5107817_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 308.0
MMD1_k127_5107817_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 301.0
MMD1_k127_5107817_2 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001943 228.0
MMD1_k127_5107817_3 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000006475 169.0
MMD1_k127_5107817_4 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000159 117.0
MMD1_k127_5112561_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006 410.0
MMD1_k127_5112561_1 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.00000000000000000000000000000000000002021 153.0
MMD1_k127_5121634_0 saccharopine dehydrogenase activity K19064 - 1.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 348.0
MMD1_k127_5123590_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1068.0
MMD1_k127_5123590_1 ABC transporter substrate-binding protein K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008375 295.0
MMD1_k127_5123590_2 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000009732 269.0
MMD1_k127_5123590_3 inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000001165 190.0
MMD1_k127_5123590_4 Transposase IS200 like - - - 0.000000000000000000000000000004653 122.0
MMD1_k127_5123590_5 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000009178 104.0
MMD1_k127_5123590_6 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K05873,K12960 - 3.5.4.28,3.5.4.31,4.6.1.1 0.00000000007693 63.0
MMD1_k127_5125672_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 295.0
MMD1_k127_5125672_1 methyltransferase K13311,K13326,K21335 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0016999,GO:0017000,GO:0017144,GO:0032259,GO:0042802,GO:0042803,GO:0044237,GO:0044249,GO:0046983 2.1.1.234 0.0000000000000000000000000000000000000000000000000000000000001797 229.0
MMD1_k127_5125672_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000002943 201.0
MMD1_k127_5128801_0 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 329.0
MMD1_k127_5128801_1 PFAM periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006872 229.0
MMD1_k127_5128801_2 PFAM LmbE family protein - - - 0.000000000000000000000000000000000000000000000000000000004126 208.0
MMD1_k127_5129926_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 527.0
MMD1_k127_513413_0 PFAM Transposase domain (DUF772) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 296.0
MMD1_k127_5135961_0 Belongs to the thiolase family K00626 - 2.3.1.9 8.019e-212 666.0
MMD1_k127_5135961_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 298.0
MMD1_k127_5135961_2 Enoyl-(Acyl carrier protein) reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000159 278.0
MMD1_k127_5135961_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000001342 245.0
MMD1_k127_5135961_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000005341 225.0
MMD1_k127_5135961_5 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000001426 188.0
MMD1_k127_5135961_6 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000000007082 152.0
MMD1_k127_5135961_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000004798 141.0
MMD1_k127_5135961_8 Asp23 family, cell envelope-related function - - - 0.00000000000000000000000000004275 121.0
MMD1_k127_5135961_9 PFAM sec-independent translocation protein mttA Hcf106 K03117 - - 0.00009244 50.0
MMD1_k127_5142353_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1251.0
MMD1_k127_5142353_1 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000002564 128.0
MMD1_k127_5142353_2 - - - - 0.0000000000000000000000000008142 118.0
MMD1_k127_5147628_0 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity K01954,K01955,K03660,K11540,K11541,K19656 GO:0000050,GO:0000702,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003922,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006142,GO:0006206,GO:0006207,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006282,GO:0006284,GO:0006285,GO:0006289,GO:0006304,GO:0006355,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008534,GO:0008652,GO:0009056,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009889,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010605,GO:0016020,GO:0016021,GO:0016053,GO:0016363,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0016743,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019627,GO:0019637,GO:0019692,GO:0019752,GO:0019856,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031974,GO:0031981,GO:0032356,GO:0032357,GO:0032991,GO:0033554,GO:0033683,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045007,GO:0045008,GO:0045738,GO:0045934,GO:0045984,GO:0046112,GO:0046386,GO:0046394,GO:0046434,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0051716,GO:0055086,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0072529,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901135,GO:1901136,GO:1901291,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1903506,GO:2000112,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001141 2.1.3.2,3.5.2.3,4.2.99.18,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 408.0
MMD1_k127_5147628_1 Carbamoyl-phosphate synthase large chain K11540 GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002119,GO:0002134,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0022612,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035295,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055086,GO:0055123,GO:0060465,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 357.0
MMD1_k127_5147628_2 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000009022 66.0
MMD1_k127_5154818_0 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 597.0
MMD1_k127_5154818_1 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 557.0
MMD1_k127_5154818_2 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003301 290.0
MMD1_k127_5154818_3 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000001085 234.0
MMD1_k127_5154818_4 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000000000000000006095 211.0
MMD1_k127_5154818_5 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000000000000000000000002659 157.0
MMD1_k127_5154818_6 Class III cytochrome C family - - - 0.00000002171 68.0
MMD1_k127_5155703_0 DNA ligase K01971 - 6.5.1.1 5.048e-268 850.0
MMD1_k127_5155703_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000001576 51.0
MMD1_k127_5160357_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 515.0
MMD1_k127_516383_0 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.00000000000000000000000000000000001504 148.0
MMD1_k127_5167551_0 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 421.0
MMD1_k127_5167551_1 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 416.0
MMD1_k127_5167551_2 acetyltransferase - - - 0.0000000000000000000000000000009296 128.0
MMD1_k127_5167551_3 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.00000000000000005273 89.0
MMD1_k127_5169341_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 521.0
MMD1_k127_5169928_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 2.315e-197 624.0
MMD1_k127_5169928_1 Carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000001649 235.0
MMD1_k127_5169928_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000001412 228.0
MMD1_k127_5169928_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000001918 231.0
MMD1_k127_5170702_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 396.0
MMD1_k127_5170702_1 Catalyzes the release of L-lysine from LysW -gamma-L- lysine K05831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005466 261.0
MMD1_k127_5170702_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000005516 241.0
MMD1_k127_5170702_3 - - - - 0.000000001107 65.0
MMD1_k127_5194394_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000004283 171.0
MMD1_k127_5194912_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001335 271.0
MMD1_k127_5194912_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000001322 214.0
MMD1_k127_5194912_2 PFAM phosphoesterase, RecJ domain protein - - - 0.00000000000000000000000522 108.0
MMD1_k127_5194912_3 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000001425 89.0
MMD1_k127_5198256_0 PFAM PfkB domain protein K16328 - 2.7.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 315.0
MMD1_k127_5198256_1 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 304.0
MMD1_k127_5198256_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001232 261.0
MMD1_k127_5198256_3 PFAM CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 0.00000000000000004649 83.0
MMD1_k127_5202940_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 394.0
MMD1_k127_5202940_1 PFAM PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000006976 172.0
MMD1_k127_5222552_0 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 569.0
MMD1_k127_5222552_1 glycosyl hydrolase, BNR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008868 339.0
MMD1_k127_5222552_2 Transcription regulator K03718 - - 0.0000000000000000000000000000000000000009819 153.0
MMD1_k127_5222552_3 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00821,K05830,K09251 - 2.6.1.11,2.6.1.17,2.6.1.82 0.0000000000000000000000000000000000009402 145.0
MMD1_k127_5223363_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K01919,K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007865 421.0
MMD1_k127_5223363_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 340.0
MMD1_k127_5223363_2 PFAM Stage II sporulation E family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003788 245.0
MMD1_k127_5223363_3 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000001439 176.0
MMD1_k127_5223363_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.000000000000000000000000000000004574 133.0
MMD1_k127_5223363_5 histidine kinase HAMP region domain protein - - - 0.000000000005262 75.0
MMD1_k127_5228610_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.256e-300 931.0
MMD1_k127_5228610_1 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000004524 103.0
MMD1_k127_5228610_2 Protein of unknown function, DUF255 K06888 - - 0.0000000000000001148 83.0
MMD1_k127_5231769_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 297.0
MMD1_k127_5231769_1 phosphorelay signal transduction system K07670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000333 244.0
MMD1_k127_5231769_2 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000005856 102.0
MMD1_k127_5231769_3 Pentapeptide repeats (9 copies) - - - 0.00000000123 66.0
MMD1_k127_5231769_4 PFAM NADH-ubiquinone oxidoreductase chain 4L K05567 - - 0.0006253 47.0
MMD1_k127_5232796_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 531.0
MMD1_k127_5232796_1 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 507.0
MMD1_k127_5232796_2 ABC-type transport system, periplasmic component surface lipoprotein K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 450.0
MMD1_k127_5232796_3 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 439.0
MMD1_k127_5232796_4 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000002607 168.0
MMD1_k127_5232796_5 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000002319 97.0
MMD1_k127_5233753_0 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 295.0
MMD1_k127_5233753_1 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000003321 173.0
MMD1_k127_5233753_2 Cytochrome c3 - - - 0.00086 51.0
MMD1_k127_5251521_0 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 471.0
MMD1_k127_5251521_1 Ferric reductase like transmembrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009322 282.0
MMD1_k127_5251521_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000002676 254.0
MMD1_k127_5251521_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000007166 178.0
MMD1_k127_5251521_4 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000008603 107.0
MMD1_k127_5251521_5 Blue (Type 1) copper domain protein - - - 0.000000000000000000001901 98.0
MMD1_k127_5268888_0 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 361.0
MMD1_k127_5268888_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 296.0
MMD1_k127_5271078_0 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 537.0
MMD1_k127_5271078_1 HypF finger K04656 - - 0.0000000000000000000000000000000000000000000000002701 183.0
MMD1_k127_5271078_2 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000004648 131.0
MMD1_k127_5271078_3 Hydrogenase expression formation protein K04653 - - 0.0000000000000000000000003523 111.0
MMD1_k127_5278792_0 Major Facilitator Superfamily K08177 - - 0.000000000000000000000000000000000000000000000000000000000000573 223.0
MMD1_k127_5284394_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 339.0
MMD1_k127_5284394_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 301.0
MMD1_k127_5284394_2 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000008496 91.0
MMD1_k127_5284467_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 524.0
MMD1_k127_5284467_1 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007682 289.0
MMD1_k127_5284467_2 Cytochrome c K17222 - - 0.000000000000000000000000000000000006874 147.0
MMD1_k127_5284467_3 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.0000000000000000000000000000000001977 141.0
MMD1_k127_5284467_4 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000004608 74.0
MMD1_k127_5284467_5 Metallo-beta-lactamase superfamily domain K07576 - - 0.00004519 48.0
MMD1_k127_5307171_0 Fructose-bisphosphate aldolase class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 439.0
MMD1_k127_5307171_1 - - - - 0.00008979 50.0
MMD1_k127_5308493_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 555.0
MMD1_k127_5308493_1 TIGRFAM FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 509.0
MMD1_k127_5308493_2 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 332.0
MMD1_k127_5308493_3 SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000000000000000000001407 188.0
MMD1_k127_5308493_4 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.0000000000000000000000000000004034 126.0
MMD1_k127_5321298_0 Transposase K07481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 361.0
MMD1_k127_5321298_1 iron dependent repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001545 269.0
MMD1_k127_5321298_2 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000044 136.0
MMD1_k127_5334956_0 PHP domain protein K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 578.0
MMD1_k127_5334956_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 514.0
MMD1_k127_5334956_2 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 366.0
MMD1_k127_5334956_3 PFAM DegV family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001324 245.0
MMD1_k127_5334956_4 I and II form the functional core of the enzyme complex. electrons originating in cytochrome C are transferred via HemE a and cu(a) to the binuclear center formed by HemE A3 and cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000002051 220.0
MMD1_k127_5334956_5 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000006013 48.0
MMD1_k127_5334956_6 Cysteine-rich secretory protein family - - - 0.00003552 53.0
MMD1_k127_5353600_0 PFAM Uncharacterised protein family (UPF0236) - - - 8.586e-204 644.0
MMD1_k127_5353600_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000003642 98.0
MMD1_k127_5357713_0 DNA methylase K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 395.0
MMD1_k127_5357713_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009183 254.0
MMD1_k127_5357713_2 SURF1 family K14998 - - 0.00000000000000000000000000000000001572 145.0
MMD1_k127_5357713_3 OsmC-like protein K04063 - - 0.00000000009536 62.0
MMD1_k127_5357713_4 PFAM blue (type 1) copper domain protein K00368 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.0009015 46.0
MMD1_k127_5385061_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 376.0
MMD1_k127_5385061_1 CO dehydrogenase flavoprotein C-terminal domain - - - 0.0000000000000000003047 92.0
MMD1_k127_539631_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 354.0
MMD1_k127_539631_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009804 292.0
MMD1_k127_539631_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000009882 229.0
MMD1_k127_5412837_0 - - - - 0.000000000000000000000000000003729 126.0
MMD1_k127_5412837_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000006436 100.0
MMD1_k127_5414678_0 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 9.224e-230 723.0
MMD1_k127_5414678_1 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 495.0
MMD1_k127_541755_0 Flagellar basal body P-ring biosynthesis protein - - - 0.00001653 53.0
MMD1_k127_5426882_0 Tricorn protease homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 368.0
MMD1_k127_5426882_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000001236 82.0
MMD1_k127_5451833_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 406.0
MMD1_k127_5451833_1 FES K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000003976 242.0
MMD1_k127_5451833_2 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000001587 206.0
MMD1_k127_5451833_3 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000002514 172.0
MMD1_k127_5451833_4 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000001808 57.0
MMD1_k127_5457906_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 352.0
MMD1_k127_5457906_1 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005844 286.0
MMD1_k127_5457906_2 DeoR C terminal sensor domain - - - 0.00000000000000000000000000000000000000000000000000000009684 205.0
MMD1_k127_5457906_3 - - - - 0.0000000000000000000000000000000000000000000003918 177.0
MMD1_k127_5457906_4 Amino acid permease - - - 0.000000000000000000000000000000000000000000001325 186.0
MMD1_k127_5457906_5 CBS domain - - - 0.00000000000001523 85.0
MMD1_k127_5457906_6 Cbs domain - - - 0.0000000304 65.0
MMD1_k127_549084_0 Cation transporting ATPase, C-terminus K01531 - 3.6.3.2 6.852e-305 957.0
MMD1_k127_549084_1 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 573.0
MMD1_k127_549084_2 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 510.0
MMD1_k127_549084_3 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000001889 192.0
MMD1_k127_549084_4 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.0000000000000000000000003752 120.0
MMD1_k127_5499618_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009614 356.0
MMD1_k127_5499618_1 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000001162 226.0
MMD1_k127_5499618_2 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000001509 216.0
MMD1_k127_5499618_3 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000009342 69.0
MMD1_k127_5509785_0 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 597.0
MMD1_k127_5509785_1 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 582.0
MMD1_k127_5509785_2 polysaccharide catabolic process K05991 - 3.2.1.123 0.00000000000000000000000000000000000000000000000000000000001922 209.0
MMD1_k127_5516966_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 302.0
MMD1_k127_5516966_1 AAA ATPase domain - - - 0.00000000000006735 84.0
MMD1_k127_5519420_0 ROK family - - - 0.0000000000000001301 83.0
MMD1_k127_5519420_1 ABC-type sugar transport system periplasmic component K10439 - - 0.0000000002658 70.0
MMD1_k127_5525666_0 PFAM glycosyl transferase, family 51 - - - 2.103e-242 764.0
MMD1_k127_5525666_1 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000296 181.0
MMD1_k127_5545767_0 AcrB/AcrD/AcrF family K03296,K18138 - - 1.13e-297 919.0
MMD1_k127_5545767_1 HlyD family secretion protein K03585 - - 0.00000000000005085 72.0
MMD1_k127_5553845_0 Natural resistance-associated macrophage protein K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004634 256.0
MMD1_k127_5553845_1 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000004049 212.0
MMD1_k127_5553845_2 proteolysis K21140 - 3.13.1.6 0.00000000000000003043 86.0
MMD1_k127_5558260_0 - - - - 0.00000000000000000000000000000000000000000003916 168.0
MMD1_k127_5558260_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000001554 98.0
MMD1_k127_556632_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000002274 227.0
MMD1_k127_556632_1 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 - - 0.00000000000000000000000000000000000000000000000000005668 195.0
MMD1_k127_556632_2 TIGRFAM Phenylacetate-CoA oxygenase, PaaI subunit K02611 - 1.14.13.149 0.0000000000000000000000000000008281 125.0
MMD1_k127_556632_3 Methylmuconolactone methyl-isomerase - - - 0.000000000000000000001467 97.0
MMD1_k127_556632_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000003708 81.0
MMD1_k127_5573807_0 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 377.0
MMD1_k127_5573807_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000006488 238.0
MMD1_k127_5573807_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000005189 173.0
MMD1_k127_5573807_3 Rdx family K07401 - - 0.0000000000002151 71.0
MMD1_k127_5573807_4 YtxH-like protein - - - 0.00003284 48.0
MMD1_k127_5596842_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.565e-274 853.0
MMD1_k127_5596842_1 PFAM Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000000000000000000000704 164.0
MMD1_k127_5596842_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000397 138.0
MMD1_k127_5596842_3 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000284 124.0
MMD1_k127_5596842_4 Belongs to the UPF0109 family K06960 - - 0.00000000000007904 79.0
MMD1_k127_561089_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 525.0
MMD1_k127_561089_1 metal-dependent phosphohydrolase, HD sub domain K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 439.0
MMD1_k127_561089_10 serine threonine protein kinase - - - 0.00000000007786 71.0
MMD1_k127_561089_11 PFAM Tetratricopeptide repeat - - - 0.0001249 54.0
MMD1_k127_561089_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006158 290.0
MMD1_k127_561089_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009064 274.0
MMD1_k127_561089_4 electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000004019 191.0
MMD1_k127_561089_5 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000007624 158.0
MMD1_k127_561089_6 PFAM diacylglycerol kinase K00901 - 2.7.1.107 0.0000000000000000000000000000000001059 143.0
MMD1_k127_561089_7 Electron transfer flavoprotein FAD-binding domain K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.00000000000000000000000003709 121.0
MMD1_k127_561089_8 metal-dependent phosphohydrolase, HD sub domain K07037 - - 0.00000000000000000000009296 100.0
MMD1_k127_561089_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000001188 100.0
MMD1_k127_5641774_0 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001467 266.0
MMD1_k127_5641774_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000003438 235.0
MMD1_k127_5641774_2 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000007918 184.0
MMD1_k127_5641774_3 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000001147 121.0
MMD1_k127_5641774_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000277 69.0
MMD1_k127_5641774_5 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000007717 63.0
MMD1_k127_5653546_0 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 399.0
MMD1_k127_5653546_1 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007885 372.0
MMD1_k127_5653546_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000005412 231.0
MMD1_k127_5653546_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000008736 197.0
MMD1_k127_5653546_4 denitrification pathway K02569,K15876 - - 0.000007889 54.0
MMD1_k127_5666169_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1145.0
MMD1_k127_5666169_1 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 406.0
MMD1_k127_5666169_2 TIGRFAM phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 370.0
MMD1_k127_5666169_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008103 364.0
MMD1_k127_5666169_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 343.0
MMD1_k127_5666169_5 ATPases associated with a variety of cellular activities K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 340.0
MMD1_k127_5666169_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 336.0
MMD1_k127_5666169_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000002029 232.0
MMD1_k127_5666169_8 Rho GTPase activating protein 33 K17933,K20647 GO:0000902,GO:0000904,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006928,GO:0006935,GO:0007154,GO:0007165,GO:0007264,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0008047,GO:0008150,GO:0009605,GO:0009653,GO:0009966,GO:0009987,GO:0010646,GO:0010769,GO:0010975,GO:0015629,GO:0016020,GO:0016043,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030425,GO:0030695,GO:0031175,GO:0031290,GO:0031344,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0035556,GO:0036477,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043005,GO:0043085,GO:0043087,GO:0043197,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043547,GO:0044093,GO:0044309,GO:0044424,GO:0044444,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045664,GO:0048468,GO:0048583,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050896,GO:0051056,GO:0051128,GO:0051239,GO:0051336,GO:0051345,GO:0051716,GO:0051960,GO:0060284,GO:0060589,GO:0060998,GO:0061001,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0071840,GO:0071944,GO:0097447,GO:0097458,GO:0097485,GO:0098772,GO:0098794,GO:0099175,GO:0099568,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:1902531,GO:2000026 - 0.0002769 49.0
MMD1_k127_5672965_0 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 409.0
MMD1_k127_5672965_1 efflux transmembrane transporter activity - - - 0.000000004906 64.0
MMD1_k127_567357_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000009795 268.0
MMD1_k127_567357_1 gas vesicle protein - - - 0.0000000000000000000929 94.0
MMD1_k127_567357_2 - - - - 0.00000000000000004007 88.0
MMD1_k127_567357_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000004481 75.0
MMD1_k127_5680022_0 Protein of unknown function (DUF4013) - - - 0.000000000000000000000000000001262 130.0
MMD1_k127_5680022_1 self proteolysis - - - 0.0000000000000000009571 94.0
MMD1_k127_5683917_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009046 567.0
MMD1_k127_5683917_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 566.0
MMD1_k127_5683917_2 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 505.0
MMD1_k127_5683917_3 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 503.0
MMD1_k127_5683917_4 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 436.0
MMD1_k127_5683917_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000001864 224.0
MMD1_k127_5683917_6 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000004183 179.0
MMD1_k127_5683917_7 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479,K07695 - - 0.0000000000000000004468 92.0
MMD1_k127_5683917_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000008116 70.0
MMD1_k127_5683917_9 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000002706 58.0
MMD1_k127_5710879_0 PFAM AAA ATPase central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000996 273.0
MMD1_k127_5710879_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000008941 233.0
MMD1_k127_5756268_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 608.0
MMD1_k127_5756268_1 Membrane - - - 0.00000000000000000000000000000000000000000000355 175.0
MMD1_k127_5756268_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000001324 72.0
MMD1_k127_57571_0 -O-antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000416 269.0
MMD1_k127_57571_1 transferase activity, transferring glycosyl groups K03208 - - 0.000000000000000000000000000000000000000000000000000000000000000000003219 246.0
MMD1_k127_57571_2 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000003244 219.0
MMD1_k127_57571_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000003261 163.0
MMD1_k127_57571_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00001349 57.0
MMD1_k127_5758683_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 6.359e-221 693.0
MMD1_k127_5758683_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 471.0
MMD1_k127_5758683_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000002823 162.0
MMD1_k127_5768954_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 8.538e-195 617.0
MMD1_k127_5768954_1 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000001255 160.0
MMD1_k127_5768954_2 phosphorelay signal transduction system - - - 0.00000000009234 74.0
MMD1_k127_5772854_0 Two component transcriptional regulator, winged helix family K07669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 338.0
MMD1_k127_5772854_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006114 231.0
MMD1_k127_5772854_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000004949 169.0
MMD1_k127_5772854_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000007414 128.0
MMD1_k127_5773172_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K02548,K03179,K17105 - 2.5.1.39,2.5.1.42,2.5.1.74 0.0000000000000000000003764 107.0
MMD1_k127_5818561_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.828e-248 796.0
MMD1_k127_5818561_1 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006862 365.0
MMD1_k127_5818561_2 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000002423 217.0
MMD1_k127_5818561_3 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000665 130.0
MMD1_k127_5818561_4 PhoQ Sensor K13924 - 2.1.1.80,3.1.1.61 0.000177 54.0
MMD1_k127_608176_0 Binding-protein-dependent transport system inner membrane component K17317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001188 250.0
MMD1_k127_608176_1 competence protein COMEC K02238 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000004929 82.0
MMD1_k127_608176_2 PFAM DnaJ homologue, subfamily C, member 28 - - - 0.0000000000001283 79.0
MMD1_k127_614296_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000897 165.0
MMD1_k127_614296_1 PFAM Transglycosylase-associated protein - - - 0.000000000000003182 80.0
MMD1_k127_614673_0 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 3.059e-208 670.0
MMD1_k127_614673_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 308.0
MMD1_k127_617881_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 521.0
MMD1_k127_617881_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 295.0
MMD1_k127_617881_2 PFAM NAD-dependent epimerase dehydratase K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000006774 213.0
MMD1_k127_617881_3 SAF K01654 - 2.5.1.56 0.0000000000000000000000000000000006347 133.0
MMD1_k127_617881_4 Sulfotransferase domain - - - 0.00000000000000000000005263 110.0
MMD1_k127_643679_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 5.477e-213 668.0
MMD1_k127_643679_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 414.0
MMD1_k127_643679_2 PFAM DNA methylase N-4 N-6 K00571,K07316 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004667 288.0
MMD1_k127_653801_0 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000000000000000000000000008947 200.0
MMD1_k127_653801_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000001112 186.0
MMD1_k127_653801_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00001652 57.0
MMD1_k127_70084_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1593.0
MMD1_k127_70084_1 PFAM Aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 527.0
MMD1_k127_70084_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 300.0
MMD1_k127_70084_3 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000445 263.0
MMD1_k127_70084_4 protein kinase activity - - - 0.000000000000000000000000000000002118 143.0
MMD1_k127_70084_5 protein secretion by the type VII secretion system - - - 0.00000000002275 75.0
MMD1_k127_70084_6 protein secretion by the type VII secretion system - - - 0.0000000008566 63.0
MMD1_k127_70084_7 Winged helix-turn-helix domain (DUF2582) - - - 0.0000003194 55.0
MMD1_k127_706422_0 belongs to the aldehyde dehydrogenase family K00135 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0043891,GO:0047100,GO:0055114 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 404.0
MMD1_k127_706422_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 356.0
MMD1_k127_706422_2 Zinc-binding dehydrogenase - - - 0.00000000000000000003572 96.0
MMD1_k127_719483_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 489.0
MMD1_k127_719483_1 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.0000000000000000000000000000000009727 138.0
MMD1_k127_719483_2 Two component transcriptional regulator, winged helix family K02483 - - 0.00000000000000000000000004342 115.0
MMD1_k127_719483_3 Gaf domain K01647,K18997,K22491 - 2.3.3.1 0.0000000987 60.0
MMD1_k127_732240_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 402.0
MMD1_k127_732240_1 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 398.0
MMD1_k127_732240_2 Patatin-like phospholipase - - - 0.000000000000000000000000003726 124.0
MMD1_k127_732240_3 PFAM glycosyl transferase, family 51 - - - 0.00008955 49.0
MMD1_k127_740639_0 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 360.0
MMD1_k127_740639_1 CBS domain containing protein K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002906 286.0
MMD1_k127_740639_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001343 270.0
MMD1_k127_740639_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000007606 233.0
MMD1_k127_740639_4 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000004768 133.0
MMD1_k127_74281_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.251e-312 975.0
MMD1_k127_74281_1 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 336.0
MMD1_k127_74281_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004158 264.0
MMD1_k127_74281_3 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000003968 208.0
MMD1_k127_74281_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000005774 163.0
MMD1_k127_746814_0 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 9.671e-258 812.0
MMD1_k127_746814_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 2.971e-223 701.0
MMD1_k127_746814_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 4.423e-220 702.0
MMD1_k127_746814_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007993 451.0
MMD1_k127_746814_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 359.0
MMD1_k127_746814_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000005833 260.0
MMD1_k127_746814_6 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000002276 149.0
MMD1_k127_746814_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000001564 127.0
MMD1_k127_748563_0 PFAM Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 429.0
MMD1_k127_751231_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 537.0
MMD1_k127_751737_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.796e-258 809.0
MMD1_k127_751737_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 401.0
MMD1_k127_751737_2 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 336.0
MMD1_k127_751737_3 Helicase conserved C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005135 252.0
MMD1_k127_751737_4 PFAM diacylglycerol kinase catalytic region - - - 0.00000000000000000000000000000000000000000000000002748 186.0
MMD1_k127_751737_5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 - - 0.00000000001565 73.0
MMD1_k127_751737_6 transporter, substrate-binding protein K02027 - - 0.00006464 55.0
MMD1_k127_752542_0 Glycosyl hydrolases family 8 K15531 - 3.2.1.156 0.000000000000000000000000000000000002348 157.0
MMD1_k127_752542_1 Calx-beta domain - - - 0.000000000000000000000000001608 129.0
MMD1_k127_766713_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000233 234.0
MMD1_k127_766713_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000006182 233.0
MMD1_k127_766713_2 Major Facilitator Superfamily - - - 0.000000000000000000000000004632 117.0
MMD1_k127_766713_3 Major Facilitator Superfamily - - - 0.0000000000000000002056 96.0
MMD1_k127_768025_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.844e-204 642.0
MMD1_k127_768025_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 335.0
MMD1_k127_768025_2 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 295.0
MMD1_k127_768025_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002315 256.0
MMD1_k127_768025_4 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000009686 241.0
MMD1_k127_768025_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000005584 87.0
MMD1_k127_77497_0 Isocitrate isopropylmalate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 483.0
MMD1_k127_77497_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 315.0
MMD1_k127_77497_2 Diguanylate cyclase - - - 0.00000000000000000004354 94.0
MMD1_k127_77497_3 - - - - 0.0000000000005914 74.0
MMD1_k127_77961_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 335.0
MMD1_k127_77961_1 ABC-3 protein K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 306.0
MMD1_k127_77961_2 PFAM ABC transporter related K09820,K11710 - - 0.0000000000000000000000000000000000000004077 152.0
MMD1_k127_77961_3 Zn peptidase - - - 0.000000000000000000000000000000000000005358 166.0
MMD1_k127_781693_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000009864 222.0
MMD1_k127_781693_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000002186 147.0
MMD1_k127_782691_0 Serine dehydrogenase proteinase K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 390.0
MMD1_k127_782691_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 349.0
MMD1_k127_782691_2 translation release factor activity K03265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 341.0
MMD1_k127_782691_3 Heat shock protein DnaJ domain protein K05516 - - 0.00000000000000000002786 91.0
MMD1_k127_782691_4 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000006482 80.0
MMD1_k127_782691_5 (Rhomboid) family K07059 - - 0.00002976 46.0
MMD1_k127_792906_0 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 304.0
MMD1_k127_792906_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 294.0
MMD1_k127_792906_2 ABC-type dipeptide oligopeptide nickel transport systems, permease K02034 - - 0.0000000000000000000000000000001036 131.0
MMD1_k127_792906_3 nucleic acid phosphodiester bond hydrolysis K07460 - - 0.00000000000003212 79.0
MMD1_k127_797122_0 PFAM LmbE family protein - - - 0.00000000000000000000000000000000000000001604 162.0
MMD1_k127_797122_1 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000586 113.0
MMD1_k127_801832_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001488 257.0
MMD1_k127_801832_1 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000006758 182.0
MMD1_k127_813196_0 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 470.0
MMD1_k127_813196_1 Belongs to the TtcA family K21947 - 2.8.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 309.0
MMD1_k127_813196_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000048 261.0
MMD1_k127_813196_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000002183 204.0
MMD1_k127_813196_4 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0003634 47.0
MMD1_k127_818748_0 PFAM deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 297.0
MMD1_k127_818748_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 297.0
MMD1_k127_818748_10 - - - - 0.000000000002571 73.0
MMD1_k127_818748_11 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000001255 63.0
MMD1_k127_818748_2 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003379 278.0
MMD1_k127_818748_3 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000005385 267.0
MMD1_k127_818748_4 Belongs to the N(4) N(6)-methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000009827 228.0
MMD1_k127_818748_6 - - - - 0.000000000000000000000000000000004885 134.0
MMD1_k127_818748_7 PFAM Stage V sporulation protein S K06416 - - 0.0000000000000000000000000000009978 123.0
MMD1_k127_818748_8 - - - - 0.000000000000000002785 95.0
MMD1_k127_818748_9 - - - - 0.0000000000000008445 90.0
MMD1_k127_82219_0 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 - - 0.00000000000000000000000000000000000000002136 158.0
MMD1_k127_82219_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000002476 156.0
MMD1_k127_826252_0 phosphorelay sensor kinase activity K01768,K02482,K02584,K07673,K10819 - 2.7.13.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000004212 241.0
MMD1_k127_826252_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000002298 209.0
MMD1_k127_826252_2 phosphorelay sensor kinase activity K01768,K02482,K02584,K07673,K10819 - 2.7.13.3,4.6.1.1 0.000000000000000000000000000000000000000000000007046 194.0
MMD1_k127_826252_3 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000002992 192.0
MMD1_k127_826252_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000002582 147.0
MMD1_k127_826252_5 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00007494 46.0
MMD1_k127_829614_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 604.0
MMD1_k127_829614_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 507.0
MMD1_k127_829614_2 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.000000000000000009535 85.0
MMD1_k127_83993_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 314.0
MMD1_k127_83993_1 Inositol monophosphatase K01092 - 3.1.3.25 0.0000201 55.0
MMD1_k127_845224_0 NurA - - - 0.000000000000000000000000000000000000000000008722 178.0
MMD1_k127_845224_1 - - - - 0.00000000000000000000000000000001665 134.0
MMD1_k127_856593_0 - - - - 5.708e-198 623.0
MMD1_k127_856593_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 297.0
MMD1_k127_856593_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000004873 119.0
MMD1_k127_866539_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 541.0
MMD1_k127_866539_1 YbaB/EbfC DNA-binding family K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000007741 101.0
MMD1_k127_866539_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000009435 88.0
MMD1_k127_868743_1 Transcriptional regulator K02529 - - 0.0003847 46.0
MMD1_k127_884055_0 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 544.0
MMD1_k127_884055_1 Peptidase family M23 - - - 0.00000000000000000000000000000002759 132.0
MMD1_k127_886462_0 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 339.0
MMD1_k127_886462_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 310.0
MMD1_k127_886462_2 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 301.0
MMD1_k127_886462_3 associated with various cellular activities K03924 - - 0.00000000000000000000000000009766 117.0
MMD1_k127_887240_0 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000001207 239.0
MMD1_k127_887240_1 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000001937 231.0
MMD1_k127_887240_2 TrkA-N domain K03499,K10716 - - 0.0000000000000000000000000000000000000000000000000000448 195.0
MMD1_k127_88959_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 565.0
MMD1_k127_88959_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 482.0
MMD1_k127_88959_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 372.0
MMD1_k127_88959_3 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 293.0
MMD1_k127_88959_4 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000003739 246.0
MMD1_k127_88959_5 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000114 236.0
MMD1_k127_88959_6 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000003654 229.0
MMD1_k127_88959_7 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000002138 195.0
MMD1_k127_88959_8 VanZ like family - - - 0.000000000000002894 85.0
MMD1_k127_896669_0 NAD synthase K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 396.0
MMD1_k127_896669_1 PFAM Shikimate quinate 5-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 369.0
MMD1_k127_896669_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 365.0
MMD1_k127_896669_3 Transmembrane secretion effector K08225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 359.0
MMD1_k127_896669_4 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 306.0
MMD1_k127_896669_5 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000004851 240.0
MMD1_k127_896669_6 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.00000000000000000000000000000000002223 147.0
MMD1_k127_896669_7 enzyme binding K00567,K07443 - 2.1.1.63 0.000000000000000000000000001524 116.0
MMD1_k127_896669_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000006498 63.0
MMD1_k127_899637_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 312.0
MMD1_k127_899637_1 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.0000000000001128 76.0
MMD1_k127_918010_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.359e-208 655.0
MMD1_k127_918010_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K01876,K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 473.0
MMD1_k127_918010_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.00000000009084 73.0
MMD1_k127_927476_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 292.0
MMD1_k127_927476_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000137 261.0
MMD1_k127_927476_2 PFAM extracellular solute-binding protein family 1 K02040 - - 0.00000000001124 78.0
MMD1_k127_927476_3 Metallo-beta-lactamase domain protein K01069 - 3.1.2.6 0.00000004052 54.0
MMD1_k127_92853_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1292.0
MMD1_k127_92853_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 492.0
MMD1_k127_92853_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 414.0
MMD1_k127_92853_3 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 382.0
MMD1_k127_92853_4 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000177 215.0
MMD1_k127_92853_5 - - - - 0.0000000000000000000000000003037 119.0
MMD1_k127_92853_6 Protein of unknown function (DUF2905) - - - 0.0000000135 62.0
MMD1_k127_944477_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000002375 211.0
MMD1_k127_944477_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000002562 200.0
MMD1_k127_944477_2 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000002613 146.0
MMD1_k127_944477_3 Protein of unknown function (DUF456) K09793 - - 0.000000003803 64.0
MMD1_k127_946699_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074,K01782 - 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000001374 238.0
MMD1_k127_946699_1 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.00000000000000000005147 95.0
MMD1_k127_96171_0 DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000004126 244.0
MMD1_k127_96171_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000005041 133.0
MMD1_k127_96171_2 Fructosamine kinase - - - 0.0002943 51.0
MMD1_k127_988273_0 protein modification by small protein conjugation - - - 0.0000000000000000000000000000000000000009763 161.0
MMD1_k127_988273_1 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000005648 120.0
MMD1_k127_988273_2 PFAM Mov34 MPN PAD-1 family - - - 0.00000000000000000000000007752 119.0
MMD1_k127_988273_3 histone H2A K63-linked ubiquitination K01768 - 4.6.1.1 0.00000000000000000002303 102.0
MMD1_k127_988273_4 PFAM von Willebrand factor type A K07114 - - 0.000000000000006572 87.0
MMD1_k127_988273_5 WXG100 protein secretion system (Wss), protein YukD - - - 0.00000000000432 70.0