logo

Overview

ID MAG02344
Name MMD1_bin.25
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class Thermodesulfovibrionia
Order Thermodesulfovibrionales
Family UBA9159
Genus
Species
Assembly information
Completeness (%) 87.54
Contamination (%) 3.07
GC content (%) 53.0
N50 (bp) 10,652
Genome size (bp) 2,139,826

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2165

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1032629_0 FAD binding domain K00278 - 1.4.3.16 8.59e-197 628.0
MMD1_k127_1032629_1 Actin K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 546.0
MMD1_k127_1032629_10 RDD family - - - 0.0000000000000000000000004708 109.0
MMD1_k127_1032629_11 PFAM FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.00000000000000000001244 93.0
MMD1_k127_1032629_12 Cell shape-determining protein K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0022603,GO:0022604,GO:0030428,GO:0042546,GO:0043621,GO:0044085,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000001077 86.0
MMD1_k127_1032629_13 DNA photolyase domain protein K01669 - 4.1.99.3 0.0003703 43.0
MMD1_k127_1032629_2 GHKL domain K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 547.0
MMD1_k127_1032629_3 Bacterial regulatory protein, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 531.0
MMD1_k127_1032629_4 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 446.0
MMD1_k127_1032629_5 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 454.0
MMD1_k127_1032629_6 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 430.0
MMD1_k127_1032629_7 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002993 264.0
MMD1_k127_1032629_8 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000566 167.0
MMD1_k127_1045521_0 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000001229 206.0
MMD1_k127_1045521_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000002116 107.0
MMD1_k127_1045521_2 Universal stress protein - - - 0.0000000000188 70.0
MMD1_k127_1076220_0 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.897e-195 622.0
MMD1_k127_1076220_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 349.0
MMD1_k127_1076220_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004562 272.0
MMD1_k127_1076220_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000113 224.0
MMD1_k127_1076220_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000005967 194.0
MMD1_k127_1076220_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000001302 151.0
MMD1_k127_1076220_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000004648 80.0
MMD1_k127_1076220_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000972 80.0
MMD1_k127_1076220_8 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000108 71.0
MMD1_k127_1106585_0 Involved in regulation of DNA replication K10725 - - 1.896e-210 660.0
MMD1_k127_1106585_1 PFAM Aminotransferase class I and II K10907 - - 5.521e-194 610.0
MMD1_k127_1106585_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 468.0
MMD1_k127_1106585_3 PFAM regulatory protein AsnC Lrp family - - - 0.00000000000000000000000000000000000000000000000000000000000000000613 229.0
MMD1_k127_1136585_0 Heat shock 70 kDa protein K04043 - - 0.0 1022.0
MMD1_k127_1136585_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.681e-237 745.0
MMD1_k127_1136585_10 spermidine synthase activity K00797 GO:0003674,GO:0003824,GO:0004766,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 419.0
MMD1_k127_1136585_11 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 391.0
MMD1_k127_1136585_12 PFAM secretion protein HlyD family protein K01993,K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 373.0
MMD1_k127_1136585_13 3-hydroxyacyl-CoA dehydrogenase K00074,K01782 - 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 342.0
MMD1_k127_1136585_14 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 344.0
MMD1_k127_1136585_15 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 323.0
MMD1_k127_1136585_16 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 291.0
MMD1_k127_1136585_17 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000284 287.0
MMD1_k127_1136585_18 Acyl-CoA dehydrogenase, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009257 271.0
MMD1_k127_1136585_19 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000001186 247.0
MMD1_k127_1136585_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.103e-232 734.0
MMD1_k127_1136585_20 Outer membrane efflux protein K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000004491 229.0
MMD1_k127_1136585_21 hmm pf00545 - GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000003765 177.0
MMD1_k127_1136585_22 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000008364 172.0
MMD1_k127_1136585_23 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000008813 169.0
MMD1_k127_1136585_24 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000003364 163.0
MMD1_k127_1136585_25 Domain of unknown function (DUF3597) - - - 0.0000000000000000000000000000000000007996 145.0
MMD1_k127_1136585_26 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000008439 138.0
MMD1_k127_1136585_27 Transglycosylase associated protein - - - 0.0000000000000000000000000009166 115.0
MMD1_k127_1136585_28 - - - - 0.000000000000000000000000005006 120.0
MMD1_k127_1136585_29 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000131 102.0
MMD1_k127_1136585_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.067e-202 642.0
MMD1_k127_1136585_30 Barstar (barnase inhibitor) K03623 - - 0.00000000000000001309 85.0
MMD1_k127_1136585_31 - - - - 0.0000003612 54.0
MMD1_k127_1136585_4 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 580.0
MMD1_k127_1136585_5 diaminopimelate decarboxylase activity K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 567.0
MMD1_k127_1136585_6 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 484.0
MMD1_k127_1136585_7 Acetyl-CoA acetyltransferase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 470.0
MMD1_k127_1136585_8 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 452.0
MMD1_k127_1136585_9 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 434.0
MMD1_k127_1141126_0 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007304 250.0
MMD1_k127_1141126_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000001896 216.0
MMD1_k127_1141126_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000001676 209.0
MMD1_k127_1141126_3 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000006784 192.0
MMD1_k127_1158668_0 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 300.0
MMD1_k127_1158668_1 ferrous iron binding K06990,K09141 - - 0.0000000000000000000000000000000000000000000000000000000000002124 215.0
MMD1_k127_1158668_2 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000001644 134.0
MMD1_k127_1158668_3 helix_turn_helix, arabinose operon control protein K07720 - - 0.0008264 43.0
MMD1_k127_1158668_4 X-domain of DnaJ-containing - - - 0.0008973 51.0
MMD1_k127_1168561_0 endonuclease III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003613 255.0
MMD1_k127_1168561_1 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000001066 230.0
MMD1_k127_1168561_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000001105 131.0
MMD1_k127_1168561_3 Putative zinc-finger - - - 0.00000000000000000000000000000004322 129.0
MMD1_k127_1196042_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 433.0
MMD1_k127_1196042_1 membrane K00389 - - 0.000000000000000000000000000000000000000000000001407 177.0
MMD1_k127_1196042_2 PFAM phosphoesterase, PA-phosphatase related - - - 0.000000000000001513 85.0
MMD1_k127_1200804_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 598.0
MMD1_k127_1200804_1 Oxidoreductase FAD NAD(P)-binding domain protein K00528,K02823,K20203 - 1.18.1.2,1.19.1.1,1.8.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 322.0
MMD1_k127_1200804_2 nuclease activity - - - 0.00000000000000000000000000000000000000000000001021 174.0
MMD1_k127_1200804_3 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000006165 155.0
MMD1_k127_1200804_4 Ribbon-helix-helix protein, copG family - - - 0.000000000000000000000001855 104.0
MMD1_k127_1223298_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1097.0
MMD1_k127_1223298_1 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 370.0
MMD1_k127_1223298_2 Phenazine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 355.0
MMD1_k127_1223298_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 295.0
MMD1_k127_1223298_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000005981 225.0
MMD1_k127_1223298_5 response regulator - - - 0.000000000000000000000000000000000001097 152.0
MMD1_k127_1223298_8 Belongs to the ompA family - - - 0.000006587 48.0
MMD1_k127_1237657_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 319.0
MMD1_k127_1237657_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000001812 246.0
MMD1_k127_1237657_2 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000006963 233.0
MMD1_k127_1237657_3 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000005851 159.0
MMD1_k127_1237657_4 Hydrolase, P-loop family K06925 - - 0.0000000000000000000000000009157 118.0
MMD1_k127_1237657_5 Protein similar to CwfJ C-terminus 1 K19710 - 2.7.7.53 0.00000000000003623 74.0
MMD1_k127_1237657_6 - - - - 0.00000000001978 67.0
MMD1_k127_1252329_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 505.0
MMD1_k127_1252329_1 Pfam Anion-transporting ATPase K01551,K19171 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001079 284.0
MMD1_k127_1252329_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003306 260.0
MMD1_k127_1252329_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000001433 184.0
MMD1_k127_1252329_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000003741 105.0
MMD1_k127_1252329_5 response regulator K07689 - - 0.0000000000000001158 94.0
MMD1_k127_1260125_0 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004332 272.0
MMD1_k127_1260125_1 oligosaccharyl transferase activity - - - 0.0000000000000000000000002316 123.0
MMD1_k127_1269586_0 CAAX prenyl protease N-terminal, five membrane helices - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 451.0
MMD1_k127_1269586_1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 385.0
MMD1_k127_1269586_2 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000002165 229.0
MMD1_k127_1269586_3 Prismane/CO dehydrogenase family K00198 - 1.2.7.4 0.000000000000000000000000000000000000000000000000000001044 196.0
MMD1_k127_135677_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.696e-205 649.0
MMD1_k127_135677_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 304.0
MMD1_k127_135677_2 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein K06883 - - 0.00000000000000000000000000000000000000000005722 172.0
MMD1_k127_135677_3 ADP-ribosylation factor family K06883 - - 0.00000000005611 63.0
MMD1_k127_1387482_0 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 312.0
MMD1_k127_1387482_1 Ecdysteroid kinase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 308.0
MMD1_k127_1394_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 565.0
MMD1_k127_1394_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007872 267.0
MMD1_k127_1394_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000001244 176.0
MMD1_k127_1394_3 Sigma-54 interaction domain K07714 - - 0.0000000000000000000004906 97.0
MMD1_k127_1394_4 - - - - 0.00000000000001291 80.0
MMD1_k127_1395400_0 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 386.0
MMD1_k127_1395400_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 320.0
MMD1_k127_1395400_2 Formylmethanofuran dehydrogenase, subunit e K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000009322 241.0
MMD1_k127_1395400_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000002917 222.0
MMD1_k127_1395400_4 TIGRFAM Diguanylate cyclase K18967 - 2.7.7.65 0.000000000000000000000002993 104.0
MMD1_k127_1413936_0 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 511.0
MMD1_k127_1413936_1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 393.0
MMD1_k127_1413936_2 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 331.0
MMD1_k127_1413936_3 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 320.0
MMD1_k127_1413936_4 Nadph-dependent fmn reductase - - - 0.00000000000000000000000000000000000000000003981 162.0
MMD1_k127_1413936_5 nucleotide metabolic process - - - 0.000000000000000000000000000000000008642 146.0
MMD1_k127_1420983_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 540.0
MMD1_k127_1420983_1 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 365.0
MMD1_k127_1420983_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009581 287.0
MMD1_k127_1420983_3 Belongs to the bacterial solute-binding protein 9 family K09815,K09818 - - 0.00000000000000000000001566 105.0
MMD1_k127_1457687_0 Peptidase family M28 - - - 0.0 1109.0
MMD1_k127_1457687_1 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008338 273.0
MMD1_k127_1457687_2 Nitrous oxide-stimulated promoter - - - 0.000000000000000000000000000000000000001579 150.0
MMD1_k127_1457687_3 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000001983 130.0
MMD1_k127_1473763_0 response regulator, receiver - - - 0.000000000000000000000000000000000005524 140.0
MMD1_k127_1475317_0 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000005393 115.0
MMD1_k127_1475317_2 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000002991 83.0
MMD1_k127_1475317_3 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0000002356 53.0
MMD1_k127_1475317_4 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000001612 51.0
MMD1_k127_1493443_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 555.0
MMD1_k127_1493443_1 Lysin motif - - - 0.000000000000000000000000000000000003056 150.0
MMD1_k127_1493443_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000009841 106.0
MMD1_k127_151237_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1193.0
MMD1_k127_151237_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.147e-277 869.0
MMD1_k127_151237_10 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 293.0
MMD1_k127_151237_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004534 273.0
MMD1_k127_151237_12 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000117 273.0
MMD1_k127_151237_13 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004508 262.0
MMD1_k127_151237_14 WHG domain - - - 0.0000000000000000000000000000000000000000000000000001051 192.0
MMD1_k127_151237_15 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000000000000000000000000000000132 188.0
MMD1_k127_151237_16 Protein of unknown function DUF116 K09729 - - 0.000000000000000000000000000000000001927 139.0
MMD1_k127_151237_17 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000002537 130.0
MMD1_k127_151237_18 Flavodoxin-like fold - - - 0.00000000000000000000000000000001753 137.0
MMD1_k127_151237_19 OstA-like protein K09774 - - 0.00000000000000000000000000000006508 130.0
MMD1_k127_151237_2 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 511.0
MMD1_k127_151237_20 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000008382 128.0
MMD1_k127_151237_21 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000006685 128.0
MMD1_k127_151237_22 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.000000000000000002817 94.0
MMD1_k127_151237_23 InterPro IPR010664 - - - 0.0009664 49.0
MMD1_k127_151237_3 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 459.0
MMD1_k127_151237_4 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 404.0
MMD1_k127_151237_5 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 390.0
MMD1_k127_151237_6 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 382.0
MMD1_k127_151237_7 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 360.0
MMD1_k127_151237_8 cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 314.0
MMD1_k127_151237_9 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 298.0
MMD1_k127_1562198_0 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997 514.0
MMD1_k127_1562198_1 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 411.0
MMD1_k127_1562198_2 Hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001888 265.0
MMD1_k127_1562198_3 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000006683 218.0
MMD1_k127_1562198_4 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000000000000000000000001345 153.0
MMD1_k127_1566287_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 586.0
MMD1_k127_1566287_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 479.0
MMD1_k127_1566287_2 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 473.0
MMD1_k127_1566287_3 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 362.0
MMD1_k127_1566287_4 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 329.0
MMD1_k127_1566287_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 310.0
MMD1_k127_1566287_6 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000691 219.0
MMD1_k127_1566287_7 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000001641 177.0
MMD1_k127_1566287_8 carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000006112 116.0
MMD1_k127_1566287_9 Histidine kinase - - - 0.0000001565 58.0
MMD1_k127_1578354_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 7.114e-236 736.0
MMD1_k127_1578354_1 Thioredoxin domain K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 526.0
MMD1_k127_1578354_11 cell adhesion involved in biofilm formation - - - 0.00000000000000004616 83.0
MMD1_k127_1578354_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 393.0
MMD1_k127_1578354_3 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005611 273.0
MMD1_k127_1578354_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006568 259.0
MMD1_k127_1578354_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000005912 242.0
MMD1_k127_1578354_6 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000009471 246.0
MMD1_k127_1578354_7 histidine kinase, HAMP K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000001912 243.0
MMD1_k127_1578354_8 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000001087 222.0
MMD1_k127_1578354_9 ABC 3 transport family K09816,K09819 - - 0.000000000000000000000000000000000000000000000000000000000000001515 227.0
MMD1_k127_1590494_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 5.603e-194 614.0
MMD1_k127_1590494_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000006146 85.0
MMD1_k127_1590494_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02849 - - 0.00000000004024 64.0
MMD1_k127_1658261_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 4.887e-228 728.0
MMD1_k127_1658261_1 membrane - - - 2.434e-208 654.0
MMD1_k127_1658261_2 Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 601.0
MMD1_k127_1658261_3 PFAM glycoside hydrolase family 3 domain protein K01207,K05349 - 3.2.1.21,3.2.1.52 0.000000000000000000000000000000000000000000000000000000000002226 226.0
MMD1_k127_1658261_4 overlaps another CDS with the same product name - - - 0.000000000000000000000000000000004258 138.0
MMD1_k127_1658261_5 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000003286 95.0
MMD1_k127_1658261_6 - - - - 0.000000000000001101 82.0
MMD1_k127_1658261_7 ThiF family K21029 - 2.7.7.80 0.000000000002865 67.0
MMD1_k127_1669488_0 PFAM Prenyltransferase squalene oxidase K01852,K06045 - 4.2.1.129,5.4.99.17,5.4.99.7 1.022e-201 639.0
MMD1_k127_1669488_1 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 392.0
MMD1_k127_1669488_2 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001415 232.0
MMD1_k127_1669488_3 Protein of unknown function DUF116 - - - 0.000000000000000000000000000000000000005231 156.0
MMD1_k127_167241_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 7.166e-203 638.0
MMD1_k127_167241_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 402.0
MMD1_k127_167241_2 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 358.0
MMD1_k127_167241_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 321.0
MMD1_k127_167241_4 sensor histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001477 248.0
MMD1_k127_167241_5 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000003721 145.0
MMD1_k127_1675010_0 GTP-binding protein TypA K06207 - - 1.61e-265 835.0
MMD1_k127_1675010_1 Domain of unknown function (DUF1998) K02336,K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 2.7.7.7 8.856e-229 732.0
MMD1_k127_1675010_2 Phospholipase, patatin family K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001023 275.0
MMD1_k127_1675010_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002541 243.0
MMD1_k127_1675010_4 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000003552 226.0
MMD1_k127_1675010_5 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000225 193.0
MMD1_k127_1675010_6 LemA family K03744 - - 0.000000000000000000000000000000000000000000000007403 177.0
MMD1_k127_1675010_7 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000001933 171.0
MMD1_k127_168832_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.0 1129.0
MMD1_k127_168832_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 431.0
MMD1_k127_168832_2 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000014 295.0
MMD1_k127_168832_3 2Fe-2S -binding domain K13483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 284.0
MMD1_k127_168832_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 296.0
MMD1_k127_168832_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 239.0
MMD1_k127_168832_6 PFAM Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000004356 118.0
MMD1_k127_168832_7 ATP-independent chaperone mediated protein folding - - - 0.00000008093 62.0
MMD1_k127_1692621_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 430.0
MMD1_k127_1692621_1 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 311.0
MMD1_k127_1692621_2 TIGRFAM FeS cluster assembly scaffold protein NifU K04488 - - 0.00000000000000000000000000000000000000000000000000001714 191.0
MMD1_k127_1692621_3 Sulfurtransferase TusA - - - 0.00000000002398 64.0
MMD1_k127_1719131_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 515.0
MMD1_k127_1719131_1 PFAM 4Fe-4S K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 423.0
MMD1_k127_1719131_10 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000003072 188.0
MMD1_k127_1719131_11 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.00000000000000000000000002068 113.0
MMD1_k127_1719131_12 - - - - 0.0000000003029 72.0
MMD1_k127_1719131_13 type I restriction enzyme K07504 - - 0.00003453 55.0
MMD1_k127_1719131_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 360.0
MMD1_k127_1719131_3 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 338.0
MMD1_k127_1719131_4 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 328.0
MMD1_k127_1719131_5 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004012 252.0
MMD1_k127_1719131_6 PFAM VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000002446 224.0
MMD1_k127_1719131_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.000000000000000000000000000000000000000000000000000000001883 206.0
MMD1_k127_1719131_8 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000002081 204.0
MMD1_k127_1719131_9 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000001863 205.0
MMD1_k127_1778544_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.336e-216 677.0
MMD1_k127_1778544_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008985 451.0
MMD1_k127_1778544_2 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 401.0
MMD1_k127_1778544_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006341 271.0
MMD1_k127_1778544_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000001947 219.0
MMD1_k127_1778544_5 - - - - 0.000000000000000000000000000000000000000000000004463 195.0
MMD1_k127_1778544_6 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000002035 177.0
MMD1_k127_1778544_7 peptidyl-tyrosine sulfation - - - 0.00001012 54.0
MMD1_k127_1778544_8 Histidine kinase - - - 0.0004146 52.0
MMD1_k127_1782187_0 Fructose-bisphosphate aldolase class-II - - - 2.924e-204 648.0
MMD1_k127_1782187_1 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 612.0
MMD1_k127_1782187_10 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000008798 186.0
MMD1_k127_1782187_11 - - - - 0.000000000000000000000000000000000000000000000003275 183.0
MMD1_k127_1782187_12 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000001826 178.0
MMD1_k127_1782187_13 aminopeptidase N - - - 0.0000000000000000000000000000000000000000005927 168.0
MMD1_k127_1782187_14 Ku70/Ku80 beta-barrel domain - - - 0.00000000000000000000000000000000000006198 153.0
MMD1_k127_1782187_15 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000001412 130.0
MMD1_k127_1782187_16 Poly-beta-hydroxybutyrate polymerase K03821 - - 0.0000000000000000000000000004447 114.0
MMD1_k127_1782187_17 - - - - 0.0000002405 54.0
MMD1_k127_1782187_2 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 578.0
MMD1_k127_1782187_3 PFAM phosphofructokinase K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 533.0
MMD1_k127_1782187_4 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 425.0
MMD1_k127_1782187_5 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 370.0
MMD1_k127_1782187_6 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 313.0
MMD1_k127_1782187_7 Flavodoxin-like fold K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000013 269.0
MMD1_k127_1782187_8 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005404 260.0
MMD1_k127_1782187_9 - - - - 0.00000000000000000000000000000000000000000000000000002446 200.0
MMD1_k127_1795510_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 456.0
MMD1_k127_1795510_1 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000008455 225.0
MMD1_k127_1795510_2 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000001482 204.0
MMD1_k127_1795510_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000006916 153.0
MMD1_k127_1795510_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000001721 129.0
MMD1_k127_1795510_5 Domain of unknown function (DUF370) K09777 - - 0.0000000000000000000000000000005087 124.0
MMD1_k127_1795510_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000113 114.0
MMD1_k127_1801611_0 response regulator K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 409.0
MMD1_k127_1801611_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 356.0
MMD1_k127_1801611_10 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000001085 110.0
MMD1_k127_1801611_11 Protein of unknown function (DUF507) - - - 0.0000000000000000000000001643 109.0
MMD1_k127_1801611_12 Protein of unknown function (DUF507) - - - 0.000000000000000000000001097 105.0
MMD1_k127_1801611_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000007405 99.0
MMD1_k127_1801611_14 PFAM HNH endonuclease K07451 - - 0.00000001026 57.0
MMD1_k127_1801611_2 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 342.0
MMD1_k127_1801611_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001594 277.0
MMD1_k127_1801611_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000001194 226.0
MMD1_k127_1801611_5 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000005479 222.0
MMD1_k127_1801611_6 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000001635 208.0
MMD1_k127_1801611_7 Single-strand binding protein family K03111 - - 0.00000000000000000000000000000000000000000000001063 173.0
MMD1_k127_1801611_8 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000516 142.0
MMD1_k127_1801611_9 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000000005661 144.0
MMD1_k127_1857269_0 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 348.0
MMD1_k127_1857269_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000000004952 208.0
MMD1_k127_1857269_2 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000000001497 143.0
MMD1_k127_1861988_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 4.177e-220 693.0
MMD1_k127_1861988_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 519.0
MMD1_k127_1861988_10 - - - - 0.0000000000002065 76.0
MMD1_k127_1861988_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000002291 59.0
MMD1_k127_1861988_12 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00007383 51.0
MMD1_k127_1861988_13 Copper resistance protein CopZ K07213 - - 0.00009527 48.0
MMD1_k127_1861988_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 439.0
MMD1_k127_1861988_3 4 iron, 4 sulfur cluster binding K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 435.0
MMD1_k127_1861988_4 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 391.0
MMD1_k127_1861988_5 Evidence 2b Function of strongly homologous gene - - - 0.0000000000000000000000000000000000000000000000000000000000000001717 224.0
MMD1_k127_1861988_6 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000000000000000000000000000000005998 201.0
MMD1_k127_1861988_7 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000000009005 155.0
MMD1_k127_1861988_8 thiamine diphosphate biosynthetic process K03154 - - 0.0000000000000003783 82.0
MMD1_k127_1889999_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 4.038e-215 678.0
MMD1_k127_1889999_1 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000001691 179.0
MMD1_k127_1921425_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1258.0
MMD1_k127_1921425_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 351.0
MMD1_k127_1921425_11 Protein of unknown function (DUF1573) - - - 0.000004199 50.0
MMD1_k127_1921425_12 TonB C terminal K03646 - - 0.0002644 52.0
MMD1_k127_1921425_2 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001065 282.0
MMD1_k127_1921425_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002315 270.0
MMD1_k127_1921425_4 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000000000000006202 208.0
MMD1_k127_1921425_5 Outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000009534 179.0
MMD1_k127_1921425_6 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000001072 156.0
MMD1_k127_1921425_7 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000002466 150.0
MMD1_k127_1921425_8 PFAM Smr protein MutS2 - - - 0.00000000000000000000000000000009084 132.0
MMD1_k127_1921425_9 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0002682,GO:0002683,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0031347,GO:0031348,GO:0034214,GO:0035821,GO:0040007,GO:0042802,GO:0043170,GO:0043207,GO:0043545,GO:0043933,GO:0044003,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044413,GO:0044414,GO:0044419,GO:0045088,GO:0045824,GO:0046483,GO:0048519,GO:0048583,GO:0048585,GO:0050776,GO:0050777,GO:0050789,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0051832,GO:0051833,GO:0052031,GO:0052037,GO:0052167,GO:0052170,GO:0052173,GO:0052200,GO:0052255,GO:0052261,GO:0052306,GO:0052309,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0061799,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0075136,GO:0080134,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.0000000000000000004273 87.0
MMD1_k127_1942055_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1412.0
MMD1_k127_1942055_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 558.0
MMD1_k127_1942055_2 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000685 207.0
MMD1_k127_1954912_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 4.87e-206 648.0
MMD1_k127_1954912_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 484.0
MMD1_k127_1954912_2 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 347.0
MMD1_k127_1954912_3 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 334.0
MMD1_k127_1954912_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000007381 262.0
MMD1_k127_1954912_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000003072 214.0
MMD1_k127_1954912_6 Cupin domain - - - 0.0000000000000000000000000000000000000002667 156.0
MMD1_k127_1954912_7 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000000000000001487 139.0
MMD1_k127_1954912_8 PFAM SNARE associated Golgi protein - - - 0.00000000000172 68.0
MMD1_k127_1976543_0 Proton-conducting membrane transporter - - - 1.521e-200 636.0
MMD1_k127_1976543_1 histidine kinase, HAMP K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000007687 207.0
MMD1_k127_1981296_0 SMART Elongator protein 3 MiaB NifB - - - 7.858e-199 651.0
MMD1_k127_1981296_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 8.328e-195 614.0
MMD1_k127_1981296_2 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 589.0
MMD1_k127_1981296_3 PFAM PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 291.0
MMD1_k127_1981296_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000003103 197.0
MMD1_k127_1985955_0 cyclic diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000009359 233.0
MMD1_k127_1985955_1 - - - - 0.000000000000000000000000000000000000000000000000000000000001504 216.0
MMD1_k127_1985955_2 - - - - 0.00000000000000000000000000000000000000000000000000001603 193.0
MMD1_k127_1985955_3 4Fe-4S binding domain - - - 0.0000000000000000000000000000000009906 144.0
MMD1_k127_1985955_4 part of a sulfur-relay system - - - 0.00000000000000000000000000004411 118.0
MMD1_k127_1985955_5 lyase activity - - - 0.0000000000000000000000000002006 123.0
MMD1_k127_1985955_6 endonuclease III K01247 - 3.2.2.21 0.00000000000000001696 88.0
MMD1_k127_1985955_7 Nitric oxide reductase K04561 - 1.7.2.5 0.000002439 51.0
MMD1_k127_199775_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 391.0
MMD1_k127_199775_1 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000000000000000002993 219.0
MMD1_k127_2008649_0 PFAM Type II secretion system protein E K02454 - - 8.772e-198 628.0
MMD1_k127_2008649_1 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 552.0
MMD1_k127_2008649_2 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007287 274.0
MMD1_k127_2008649_3 SMART PDZ DHR GLGF domain protein K02452 - - 0.00000000000000000000000000000002894 130.0
MMD1_k127_2024818_0 TrkA-N domain K03455,K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 369.0
MMD1_k127_2024818_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 310.0
MMD1_k127_2024818_2 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 293.0
MMD1_k127_2024818_3 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000007108 136.0
MMD1_k127_2032024_0 Protein of unknown function (DUF2950) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 308.0
MMD1_k127_2032024_2 Peptidase M16 domain protein K07263 - - 0.00000000004998 64.0
MMD1_k127_2032024_3 Protein of unknown function (DUF1059) - - - 0.00000001164 57.0
MMD1_k127_2032024_4 Tetratricopeptide repeat - - - 0.00002026 57.0
MMD1_k127_2032024_5 - - - - 0.00005332 45.0
MMD1_k127_2032024_6 COG0500 SAM-dependent methyltransferases - - - 0.00005706 49.0
MMD1_k127_2032024_7 PFAM Methyltransferase - - - 0.0004021 47.0
MMD1_k127_203949_0 Domain in cystathionine beta-synthase and other proteins. K07182 - - 3.195e-230 728.0
MMD1_k127_203949_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 581.0
MMD1_k127_203949_2 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 456.0
MMD1_k127_203949_3 response regulator K02667 - - 0.0000000000000000000000000000008916 126.0
MMD1_k127_2076157_0 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000001186 171.0
MMD1_k127_2076157_1 STAS domain K04749 - - 0.000000000000000000000001357 107.0
MMD1_k127_2076157_2 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000005036 74.0
MMD1_k127_2076157_3 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000001725 71.0
MMD1_k127_2113408_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 3.945e-201 646.0
MMD1_k127_2113408_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 372.0
MMD1_k127_2113408_2 His Kinase A (phosphoacceptor) domain K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004723 276.0
MMD1_k127_2113408_3 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008622 277.0
MMD1_k127_2113408_4 - - - - 0.000000000000000000000005872 106.0
MMD1_k127_2115395_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 342.0
MMD1_k127_2115395_1 Universal stress protein family - - - 0.000000000104 69.0
MMD1_k127_2115395_2 - K07112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000005736 60.0
MMD1_k127_2115395_3 Universal stress protein family - - - 0.00000001101 64.0
MMD1_k127_2115395_4 Universal stress protein - - - 0.0000006387 59.0
MMD1_k127_213946_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 2.71e-272 849.0
MMD1_k127_2141026_0 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 422.0
MMD1_k127_2141026_1 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 337.0
MMD1_k127_2141026_2 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004685 269.0
MMD1_k127_2141026_3 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000005885 168.0
MMD1_k127_2141026_4 - - - - 0.00000000000006769 73.0
MMD1_k127_2149933_0 Cation transporter/ATPase, N-terminus K01531,K12955 - 3.6.3.2 0.0 1228.0
MMD1_k127_2149933_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 586.0
MMD1_k127_2149933_2 Dna alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009827 263.0
MMD1_k127_2149933_3 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000002178 237.0
MMD1_k127_2149933_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000005338 177.0
MMD1_k127_2149933_5 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000298 155.0
MMD1_k127_2149933_6 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000009757 154.0
MMD1_k127_2149933_7 COG COG0589 Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms - - - 0.000000000000000000001035 106.0
MMD1_k127_2149933_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000005743 69.0
MMD1_k127_2149933_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000003022 63.0
MMD1_k127_218534_0 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 2.418e-244 778.0
MMD1_k127_218534_1 Biogenesis protein K09792 - - 0.00000000000000000000000000000000000000000000911 168.0
MMD1_k127_218534_2 cyclic nucleotide binding K00384,K01420 - 1.8.1.9 0.00000000000000000001428 95.0
MMD1_k127_2198447_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.625e-298 924.0
MMD1_k127_2198447_1 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000006394 268.0
MMD1_k127_2198447_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000003065 227.0
MMD1_k127_2198447_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0034214,GO:0042802,GO:0043170,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0061799,GO:0065003,GO:0071704,GO:0071840,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.0000000000000000000000000000000000000000003925 161.0
MMD1_k127_2198447_5 iron ion binding - - - 0.000000000000000000000000000000258 132.0
MMD1_k127_2205330_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 328.0
MMD1_k127_2205330_1 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000003533 181.0
MMD1_k127_2205330_2 - - - - 0.0000003863 57.0
MMD1_k127_2212723_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 525.0
MMD1_k127_2212723_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 363.0
MMD1_k127_2212723_10 regulator, PATAN and FRGAF domain-containing - - - 0.00000000000000000000000000000000000000004121 166.0
MMD1_k127_2212723_11 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000006111 145.0
MMD1_k127_2212723_12 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000001163 133.0
MMD1_k127_2212723_13 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000005911 105.0
MMD1_k127_2212723_14 PFAM CheW domain protein K03408 - - 0.0000000000000000000001547 105.0
MMD1_k127_2212723_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 342.0
MMD1_k127_2212723_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 331.0
MMD1_k127_2212723_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000811 283.0
MMD1_k127_2212723_5 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001263 265.0
MMD1_k127_2212723_6 HEAT repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004941 280.0
MMD1_k127_2212723_7 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000404 242.0
MMD1_k127_2212723_8 Response regulator receiver domain K03413 - - 0.00000000000000000000000000000000000000000005992 165.0
MMD1_k127_2212723_9 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.0000000000000000000000000000000000000000003601 182.0
MMD1_k127_2226789_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 490.0
MMD1_k127_2226789_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 484.0
MMD1_k127_2226789_10 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000001521 195.0
MMD1_k127_2226789_11 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000001001 156.0
MMD1_k127_2226789_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 478.0
MMD1_k127_2226789_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 475.0
MMD1_k127_2226789_4 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 424.0
MMD1_k127_2226789_5 COG1194 A G-specific DNA glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 319.0
MMD1_k127_2226789_6 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 322.0
MMD1_k127_2226789_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 313.0
MMD1_k127_2226789_8 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 296.0
MMD1_k127_2226789_9 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000000000000009694 195.0
MMD1_k127_2231788_0 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000002957 220.0
MMD1_k127_2231788_1 GTP-binding GTPase Middle Region K03665 - - 0.000000000000000000000000000000000000000000000001257 179.0
MMD1_k127_2231788_2 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.0000000002074 66.0
MMD1_k127_2244404_0 ATPase BadF BadG BcrA BcrD type - - - 0.0 1398.0
MMD1_k127_2244404_1 Chemotaxis sensory transducer K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 366.0
MMD1_k127_2244404_10 Protein of unknown function (DUF1460) - - - 0.000002702 58.0
MMD1_k127_2244404_2 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305 327.0
MMD1_k127_2244404_3 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 289.0
MMD1_k127_2244404_4 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000317 274.0
MMD1_k127_2244404_5 SMART Signal transduction response regulator, receiver domain - - - 0.00000000000000000000000000000000000000000000000000006934 198.0
MMD1_k127_2244404_6 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000006304 129.0
MMD1_k127_2244404_7 PFAM acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000002602 111.0
MMD1_k127_2244404_8 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000002795 94.0
MMD1_k127_2244404_9 Chemotaxis sensory transducer K03406 - - 0.000000000000009593 76.0
MMD1_k127_2282356_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1182.0
MMD1_k127_2305548_0 GAF domain K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 342.0
MMD1_k127_2305548_1 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002656 288.0
MMD1_k127_2305548_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005594 279.0
MMD1_k127_2305548_3 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000004758 178.0
MMD1_k127_2305548_4 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000001938 131.0
MMD1_k127_2305548_5 Belongs to the sulfur carrier protein TusA family - GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.00000000000000000002316 94.0
MMD1_k127_2320049_0 pfam abc K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 369.0
MMD1_k127_2320049_1 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 324.0
MMD1_k127_2320049_2 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000007869 236.0
MMD1_k127_2334276_0 PFAM PilT protein domain protein K06865 - - 1.385e-210 660.0
MMD1_k127_2334276_1 PFAM 4-vinyl reductase, 4VR K07013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 596.0
MMD1_k127_2334276_2 TIGRFAM cell division ATPase MinD K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 356.0
MMD1_k127_2334276_3 Peptidase A24A, prepilin type IV K07991 - 3.4.23.52 0.0000000000000000000000000000000000000000000000000000000000000000000000002371 255.0
MMD1_k127_2334276_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000228 185.0
MMD1_k127_2334276_5 - - - - 0.000000000000000000000000000000001182 140.0
MMD1_k127_2334276_6 - - - - 0.00000008603 61.0
MMD1_k127_2349342_0 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
MMD1_k127_2349342_1 PFAM Glycosyl transferase family 2 K12992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 303.0
MMD1_k127_2349342_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001424 272.0
MMD1_k127_2349342_4 Cytidylyltransferase family K00981 - 2.7.7.41 0.0003371 47.0
MMD1_k127_2351245_0 heme-copper terminal oxidase activity K02274 - 1.9.3.1 1.876e-233 732.0
MMD1_k127_2351245_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 317.0
MMD1_k127_2351245_2 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000005393 248.0
MMD1_k127_2351245_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000007073 229.0
MMD1_k127_2351245_4 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000006223 213.0
MMD1_k127_2351245_5 TIGRFAM caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.0000000002376 66.0
MMD1_k127_2351245_6 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000299 48.0
MMD1_k127_2360835_0 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 481.0
MMD1_k127_2360835_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000302 282.0
MMD1_k127_2360835_2 PFAM lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000001188 207.0
MMD1_k127_2360958_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1191.0
MMD1_k127_2360958_1 Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 368.0
MMD1_k127_2360958_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000007221 222.0
MMD1_k127_2360958_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000006767 214.0
MMD1_k127_2360958_4 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000001364 102.0
MMD1_k127_2360958_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000002808 92.0
MMD1_k127_2364500_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000002054 164.0
MMD1_k127_2364500_1 Phosphopantetheine attachment site - - - 0.000000000000000000002768 101.0
MMD1_k127_2364500_2 KR domain K10780 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.104 0.000000000002678 70.0
MMD1_k127_2371748_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1330.0
MMD1_k127_2371748_1 Phage integrase family K02019 - - 0.00000000000000005637 81.0
MMD1_k127_2374610_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 6.198e-256 803.0
MMD1_k127_2374610_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 532.0
MMD1_k127_2374610_10 regulation of ruffle assembly - - - 0.000000000000000000000000000000000000000000000000000000001534 210.0
MMD1_k127_2374610_11 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000001438 207.0
MMD1_k127_2374610_12 Pfam:TPM K08988 - - 0.00000000000000000000000000000000000000000000000000000003189 203.0
MMD1_k127_2374610_13 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000001584 179.0
MMD1_k127_2374610_14 Domain of unknown function (DUF1992) - - - 0.000000000000000000000000000000000000000005605 157.0
MMD1_k127_2374610_15 HNH nucleases - - - 0.00000000000000000000000000000000000004052 144.0
MMD1_k127_2374610_16 Ferredoxin K17992 - 1.12.1.3 0.000000000000000000000000000000000002121 142.0
MMD1_k127_2374610_18 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 - - 0.0000000000000000001856 98.0
MMD1_k127_2374610_19 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000001009 96.0
MMD1_k127_2374610_2 LysM domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 349.0
MMD1_k127_2374610_20 protein histidine kinase activity - - - 0.000000000000000002349 93.0
MMD1_k127_2374610_21 helix-turn-helix- domain containing protein, AraC type - - - 0.00000000000000002696 93.0
MMD1_k127_2374610_22 - - - - 0.0000000000007676 70.0
MMD1_k127_2374610_23 HD domain - - - 0.0000000027 68.0
MMD1_k127_2374610_24 - - - - 0.000000003758 65.0
MMD1_k127_2374610_3 Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate K15527 - 2.5.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 344.0
MMD1_k127_2374610_4 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 327.0
MMD1_k127_2374610_5 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 313.0
MMD1_k127_2374610_6 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 293.0
MMD1_k127_2374610_7 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 291.0
MMD1_k127_2374610_8 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 287.0
MMD1_k127_2374610_9 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000009115 219.0
MMD1_k127_2383285_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 516.0
MMD1_k127_2383285_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 509.0
MMD1_k127_2383285_2 6-phosphogluconate dehydrogenase (decarboxylating) K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 384.0
MMD1_k127_2383285_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00615,K00616,K13810 - 2.2.1.1,2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 376.0
MMD1_k127_2389651_0 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.0 1070.0
MMD1_k127_2389651_1 Sigma54 specific transcriptional regulator, Fis family - - - 3.975e-222 702.0
MMD1_k127_2389651_10 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000004888 91.0
MMD1_k127_2389651_11 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000001247 83.0
MMD1_k127_2389651_12 Multicopper oxidase - - - 0.0000000000001394 81.0
MMD1_k127_2389651_2 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 479.0
MMD1_k127_2389651_3 PHB de-polymerase C-terminus K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009766 462.0
MMD1_k127_2389651_4 NeuB family K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 435.0
MMD1_k127_2389651_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 336.0
MMD1_k127_2389651_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 324.0
MMD1_k127_2389651_7 kinase activity K01006,K01007,K22424 - 2.7.3.13,2.7.9.1,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 311.0
MMD1_k127_2389651_8 Stage II sporulation protein E (SpoIIE) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001964 257.0
MMD1_k127_2389651_9 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.0000000000000000003791 99.0
MMD1_k127_2405271_0 Surface antigen K07277 - - 2.535e-262 829.0
MMD1_k127_2405271_1 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000001173 110.0
MMD1_k127_2405271_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000001918 73.0
MMD1_k127_2425271_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 373.0
MMD1_k127_2425271_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 316.0
MMD1_k127_2425271_2 myo-inosose-2 dehydratase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 310.0
MMD1_k127_2425271_3 PFAM Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000000000006906 163.0
MMD1_k127_2425271_4 regulatory protein, FmdB family - - - 0.0000000000000000000005942 98.0
MMD1_k127_2425271_5 Mo-co oxidoreductase dimerisation domain - - - 0.000000000001425 70.0
MMD1_k127_2425271_6 Response regulator receiver domain - - - 0.0007289 49.0
MMD1_k127_2425271_7 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 - - 0.0009127 49.0
MMD1_k127_2428449_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1117.0
MMD1_k127_2428449_1 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 3.321e-295 944.0
MMD1_k127_2428449_2 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.00000000000000000000000000000000000000000000000000000000000000000005637 235.0
MMD1_k127_2428449_3 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.0000000000000000000000000000000000000000000002245 172.0
MMD1_k127_2428449_4 COG3086 Positive regulator of sigma E activity K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000009965 56.0
MMD1_k127_2428715_0 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 5.084e-194 619.0
MMD1_k127_2428715_1 KEOPS complex Cgi121-like subunit K09119 - - 0.00000000000000000000000000000000000001432 152.0
MMD1_k127_2431661_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 6.23e-201 634.0
MMD1_k127_2431661_1 PFAM Integrase K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 298.0
MMD1_k127_2431661_2 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000000000000000000000000001638 184.0
MMD1_k127_2431661_3 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000001641 172.0
MMD1_k127_2431661_4 Thioredoxin-like - - - 0.0000000000000000000000000000000001811 138.0
MMD1_k127_2431661_5 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000000003199 129.0
MMD1_k127_2431661_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000005387 97.0
MMD1_k127_2431661_7 deoxyhypusine monooxygenase activity - - - 0.00000000000000000008629 98.0
MMD1_k127_2431661_8 transposase activity K07483 - - 0.00000000000000000009428 91.0
MMD1_k127_2431661_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0003575 48.0
MMD1_k127_2441484_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 426.0
MMD1_k127_2441484_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000006631 195.0
MMD1_k127_2441484_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000008898 110.0
MMD1_k127_2441484_3 Sulphur transport K07112 - - 0.00000000000000000003294 93.0
MMD1_k127_2442269_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 4.349e-260 807.0
MMD1_k127_2442269_1 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 572.0
MMD1_k127_2442269_2 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000001563 226.0
MMD1_k127_2442269_3 Tetratricopeptide repeat - - - 0.0000002437 56.0
MMD1_k127_2451109_0 Phosphoglycerate kinase K00927 - 2.7.2.3 1.796e-204 642.0
MMD1_k127_2451109_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 499.0
MMD1_k127_2451109_10 response regulator K07668,K07775 - - 0.000000000000000000000000000000000000000000000000000000345 202.0
MMD1_k127_2451109_11 TPR repeat - - - 0.000000000000000000000000000000000000000000000000003351 192.0
MMD1_k127_2451109_12 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.000000000000000000000000000000000000000259 164.0
MMD1_k127_2451109_13 RNA-binding protein containing a PIN domain K06962 - - 0.0000000000000000000000000000000001076 138.0
MMD1_k127_2451109_14 Belongs to the UPF0235 family K09131 - - 0.000000000000004123 78.0
MMD1_k127_2451109_2 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 482.0
MMD1_k127_2451109_3 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 358.0
MMD1_k127_2451109_4 Histidine kinase K07641,K07642,K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000004402 276.0
MMD1_k127_2451109_5 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000003304 239.0
MMD1_k127_2451109_6 phosphatidate phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000003764 246.0
MMD1_k127_2451109_7 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000007499 237.0
MMD1_k127_2451109_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000002964 210.0
MMD1_k127_2451109_9 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000001397 207.0
MMD1_k127_2466675_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 339.0
MMD1_k127_2466675_1 oxidoreductase K10960 - 1.3.1.111,1.3.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000001754 269.0
MMD1_k127_2466675_2 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000001874 232.0
MMD1_k127_2466675_3 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000000000000005756 186.0
MMD1_k127_2466675_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000001217 177.0
MMD1_k127_2466675_5 energy transducer activity K03832 - - 0.00000000000000000000000000000000000003588 154.0
MMD1_k127_2466675_6 Universal stress protein family - - - 0.0000000000000000000000000000000000001366 146.0
MMD1_k127_2466675_7 proteolysis K03665 - - 0.000000000000000000000000000008209 124.0
MMD1_k127_250580_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 491.0
MMD1_k127_250580_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 429.0
MMD1_k127_250580_10 glycosyl transferase family 2 - - - 0.00003692 49.0
MMD1_k127_250580_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 344.0
MMD1_k127_250580_3 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 327.0
MMD1_k127_250580_4 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 317.0
MMD1_k127_250580_5 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000002706 198.0
MMD1_k127_250580_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000001839 183.0
MMD1_k127_250580_7 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000001032 137.0
MMD1_k127_250580_8 cellulase activity - - - 0.0000000000000000000000000001356 134.0
MMD1_k127_250580_9 CAAX protease self-immunity - - - 0.000003391 56.0
MMD1_k127_2531523_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1252.0
MMD1_k127_2531523_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 552.0
MMD1_k127_2531523_10 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000000000000001538 185.0
MMD1_k127_2531523_11 AI-2E family transporter - - - 0.00000000000000000000000000000000004227 148.0
MMD1_k127_2531523_12 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000007648 121.0
MMD1_k127_2531523_13 NHL repeat - - - 0.000000000000000000000001309 117.0
MMD1_k127_2531523_14 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000004404 90.0
MMD1_k127_2531523_15 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000001227 68.0
MMD1_k127_2531523_16 cheY-homologous receiver domain - - - 0.0007856 46.0
MMD1_k127_2531523_2 Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 514.0
MMD1_k127_2531523_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008168 467.0
MMD1_k127_2531523_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 445.0
MMD1_k127_2531523_5 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 382.0
MMD1_k127_2531523_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 334.0
MMD1_k127_2531523_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 344.0
MMD1_k127_2531523_8 PFAM HhH-GPD superfamily base excision DNA repair protein K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001004 280.0
MMD1_k127_2531523_9 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.00000000000000000000000000000000000000000000000000001833 199.0
MMD1_k127_2540521_0 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 2.955e-238 752.0
MMD1_k127_2540521_1 GAF domain - - - 1.057e-204 680.0
MMD1_k127_2540521_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 359.0
MMD1_k127_2540521_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000005357 257.0
MMD1_k127_2540521_4 LysM domain K01449,K19223 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000001817 240.0
MMD1_k127_2540521_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000006971 183.0
MMD1_k127_2540521_6 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000002192 170.0
MMD1_k127_2540521_7 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.00000000000000000000000000000007155 126.0
MMD1_k127_2542619_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 295.0
MMD1_k127_2542619_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004439 248.0
MMD1_k127_2542619_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000001244 203.0
MMD1_k127_2542619_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000007954 153.0
MMD1_k127_2542619_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000009947 129.0
MMD1_k127_2542619_5 Zinc dependent phospholipase C - - - 0.0000007176 53.0
MMD1_k127_2546769_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.027e-281 878.0
MMD1_k127_2546769_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 486.0
MMD1_k127_2546769_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 474.0
MMD1_k127_2546769_3 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 449.0
MMD1_k127_2546769_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000001646 181.0
MMD1_k127_2546769_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000008728 153.0
MMD1_k127_2546769_6 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000001871 89.0
MMD1_k127_2563179_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 568.0
MMD1_k127_2563179_1 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 556.0
MMD1_k127_2563179_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000000000000001768 196.0
MMD1_k127_2563179_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000005705 191.0
MMD1_k127_2563179_12 Polyprenyl synthetase K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000001831 168.0
MMD1_k127_2563179_13 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000001971 144.0
MMD1_k127_2563179_14 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000002147 131.0
MMD1_k127_2563179_15 Protein of unknown function (DUF1284) K09706 - - 0.000000000000000000000000000000009727 132.0
MMD1_k127_2563179_16 - - - - 0.00000000000000000000000000000001195 132.0
MMD1_k127_2563179_17 epimerase dehydratase K07071 - - 0.0000000000000000000000000000002692 129.0
MMD1_k127_2563179_18 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000001407 118.0
MMD1_k127_2563179_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 402.0
MMD1_k127_2563179_20 Chemoreceptor zinc-binding domain - - - 0.0001343 50.0
MMD1_k127_2563179_3 phosphorelay sensor kinase activity K03320,K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 395.0
MMD1_k127_2563179_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 387.0
MMD1_k127_2563179_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 348.0
MMD1_k127_2563179_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 353.0
MMD1_k127_2563179_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
MMD1_k127_2563179_8 PINc domain ribonuclease K09006 - - 0.0000000000000000000000000000000000000000000000000000000000000009858 228.0
MMD1_k127_2563179_9 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000004083 208.0
MMD1_k127_2566839_0 metal ion transmembrane transporter activity K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 534.0
MMD1_k127_2566839_1 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 414.0
MMD1_k127_2566839_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 352.0
MMD1_k127_2566839_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 316.0
MMD1_k127_2566839_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000181 201.0
MMD1_k127_2566839_5 Protein of unknown function DUF116 K09729 - - 0.000000000000000000000000000009934 124.0
MMD1_k127_2566839_6 - - - - 0.000173 47.0
MMD1_k127_2566839_7 - - - - 0.0002117 51.0
MMD1_k127_2573351_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.499e-318 992.0
MMD1_k127_2573351_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 599.0
MMD1_k127_2573351_10 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000232 254.0
MMD1_k127_2573351_11 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001859 246.0
MMD1_k127_2573351_12 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004941 253.0
MMD1_k127_2573351_13 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000002065 235.0
MMD1_k127_2573351_14 imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000004329 228.0
MMD1_k127_2573351_15 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000000003988 218.0
MMD1_k127_2573351_16 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000007357 185.0
MMD1_k127_2573351_17 Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000001209 177.0
MMD1_k127_2573351_18 nucleotide phosphatase activity, acting on free nucleotides K00943,K02013,K02017,K03574,K03752,K06928 - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 0.00000000000000000000000000000000000005721 148.0
MMD1_k127_2573351_19 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001156 132.0
MMD1_k127_2573351_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 593.0
MMD1_k127_2573351_20 electron transfer activity K05337,K17247 - - 0.000000000000000000000000000002957 119.0
MMD1_k127_2573351_21 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000006317 96.0
MMD1_k127_2573351_22 - - - - 0.0000000000000001467 84.0
MMD1_k127_2573351_23 Ankyrin repeat protein - - - 0.000000000000001313 83.0
MMD1_k127_2573351_24 Cupin 2, conserved barrel domain protein - - - 0.00000000004264 67.0
MMD1_k127_2573351_26 conserved protein, contains double-stranded beta-helix domain - - - 0.00002077 52.0
MMD1_k127_2573351_3 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 546.0
MMD1_k127_2573351_4 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 406.0
MMD1_k127_2573351_5 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 381.0
MMD1_k127_2573351_6 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 367.0
MMD1_k127_2573351_7 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 302.0
MMD1_k127_2573351_8 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 295.0
MMD1_k127_2573351_9 TGS domain K06944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005939 280.0
MMD1_k127_2599504_0 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 570.0
MMD1_k127_2599504_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 459.0
MMD1_k127_2599504_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 357.0
MMD1_k127_2599504_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001132 274.0
MMD1_k127_2599504_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000674 277.0
MMD1_k127_2599504_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000003508 203.0
MMD1_k127_2599504_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000001265 124.0
MMD1_k127_2599504_7 PAS domain K09155 - - 0.00000000000000002099 81.0
MMD1_k127_2599504_8 - - - - 0.000000000000002413 80.0
MMD1_k127_2599504_9 Fibronectin, type III domain - - - 0.000000003569 68.0
MMD1_k127_2607885_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.96e-321 1006.0
MMD1_k127_2607885_1 Extracellular solute-binding protein, family 5 K02035 - - 3.762e-224 711.0
MMD1_k127_2607885_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005611 273.0
MMD1_k127_2607885_3 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000006559 123.0
MMD1_k127_261651_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.787e-248 779.0
MMD1_k127_261651_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 291.0
MMD1_k127_261651_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 - 2.1.1.200,3.5.1.19,6.1.1.16 0.000000000000000000000000000000000000000000000006515 175.0
MMD1_k127_261651_3 - - - - 0.00000000000000000000000000000000004669 145.0
MMD1_k127_2662934_0 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000008228 206.0
MMD1_k127_2662934_1 - - - - 0.0000000000000000000000000000000000000000000000000000001941 206.0
MMD1_k127_2662934_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000001583 198.0
MMD1_k127_2662934_3 PFAM Pyridoxamine 5'-phosphate - - - 0.00000000000000000000000000000000000005073 146.0
MMD1_k127_2680796_0 Poly-beta-hydroxybutyrate polymerase K03821 - - 1.681e-216 681.0
MMD1_k127_2680796_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 606.0
MMD1_k127_2680796_10 Hypothetical methyltransferase K07755 - 2.1.1.137 0.00000000001184 66.0
MMD1_k127_2680796_11 Protein of unknown function (DUF2892) - - - 0.00000002252 65.0
MMD1_k127_2680796_2 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 295.0
MMD1_k127_2680796_3 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 302.0
MMD1_k127_2680796_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000956 277.0
MMD1_k127_2680796_5 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000004816 251.0
MMD1_k127_2680796_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001431 241.0
MMD1_k127_2680796_7 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000002478 201.0
MMD1_k127_2680796_8 Diguanylate cyclase with GAF sensor - - - 0.0000000000000000000000000000000000000003336 168.0
MMD1_k127_2680796_9 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043021,GO:0043023,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000006419 74.0
MMD1_k127_2698647_0 Dehydratase family K01687 - 4.2.1.9 1.964e-224 703.0
MMD1_k127_2698647_1 Protein of unknown function (DUF465) K09794 - - 0.00000001488 56.0
MMD1_k127_2720249_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 428.0
MMD1_k127_2720249_1 Phosphate transporter family K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 416.0
MMD1_k127_2720249_10 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000001852 151.0
MMD1_k127_2720249_11 YqeY-like protein K09117 - - 0.0000000000000000000000000000000000003584 145.0
MMD1_k127_2720249_12 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000007243 93.0
MMD1_k127_2720249_13 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000006263 73.0
MMD1_k127_2720249_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 428.0
MMD1_k127_2720249_3 Transcriptional regulator K11921,K19338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 390.0
MMD1_k127_2720249_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 379.0
MMD1_k127_2720249_5 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008243 365.0
MMD1_k127_2720249_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826,K02619 - 2.6.1.42,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001317 281.0
MMD1_k127_2720249_7 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000001949 261.0
MMD1_k127_2720249_8 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000008119 162.0
MMD1_k127_2720249_9 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000005288 165.0
MMD1_k127_2721257_0 Beta-lactamase - - - 5.96e-262 830.0
MMD1_k127_2721257_1 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 346.0
MMD1_k127_2721257_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000886 207.0
MMD1_k127_2721257_3 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000004112 129.0
MMD1_k127_2721257_4 Smr domain - - - 0.000000000000000000000000002585 114.0
MMD1_k127_2721257_5 Cupin 2, conserved barrel domain protein K21700 - - 0.00000000000000000000000006286 111.0
MMD1_k127_2721257_6 response regulator, receiver - - - 0.0008092 49.0
MMD1_k127_2721257_7 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0008195 42.0
MMD1_k127_273584_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 508.0
MMD1_k127_273584_1 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 463.0
MMD1_k127_273584_10 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.00009303 49.0
MMD1_k127_273584_2 Family 5 K02035,K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 357.0
MMD1_k127_273584_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 312.0
MMD1_k127_273584_4 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 303.0
MMD1_k127_273584_5 aldo keto reductase K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000002471 222.0
MMD1_k127_273584_6 Cytochrome c mono- and diheme variants - - - 0.0000000000000000000000000000000000000000000000000000009698 197.0
MMD1_k127_273584_7 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000002378 166.0
MMD1_k127_273584_8 - - - - 0.000000000000000000000000000000000000000004667 161.0
MMD1_k127_273584_9 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000001198 135.0
MMD1_k127_2747566_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 1.647e-249 782.0
MMD1_k127_2747566_1 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 464.0
MMD1_k127_2747566_2 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001121 273.0
MMD1_k127_2747566_3 Aminoacyl-tRNA editing domain K03976 - - 0.000000000000000000000000000000000000000000000000000000001092 205.0
MMD1_k127_2747566_4 SMART Signal transduction response regulator, receiver domain - - - 0.00000000000000000000000000000000000000000000001738 181.0
MMD1_k127_2747566_5 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000001518 172.0
MMD1_k127_2747566_6 PFAM Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000004771 154.0
MMD1_k127_2747566_7 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 0.00000000000000000000000000000005439 129.0
MMD1_k127_2752713_0 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 507.0
MMD1_k127_2752713_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 299.0
MMD1_k127_2752713_2 Type II/IV secretion system protein K02670 - - 0.0000000000029 77.0
MMD1_k127_2752713_3 General secretory system II protein E domain protein K02454,K02652 - - 0.00000001951 65.0
MMD1_k127_2793350_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.332e-232 725.0
MMD1_k127_2793350_1 DEAD DEAH box helicase K03724 - - 3.042e-228 726.0
MMD1_k127_2793350_10 PFAM Like-Sm ribonucleoprotein, core K04796 - - 0.00000000000000000000000000000000000001163 144.0
MMD1_k127_2793350_11 binds to the 23S rRNA K02922 - - 0.000000000000000000000000428 105.0
MMD1_k127_2793350_12 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000003026 51.0
MMD1_k127_2793350_2 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 465.0
MMD1_k127_2793350_3 TIGRFAM daunorubicin resistance ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 460.0
MMD1_k127_2793350_4 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 383.0
MMD1_k127_2793350_5 ZPR1-related zinc finger protein K06874 - - 0.0000000000000000000000000000000000000000000000000000000000000162 219.0
MMD1_k127_2793350_6 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000101 218.0
MMD1_k127_2793350_7 PFAM PUA domain containing protein K07575 - - 0.0000000000000000000000000000000000000000000000000000000000006854 214.0
MMD1_k127_2793350_8 Pfam:DUF552 K09152 - - 0.00000000000000000000000000000000000000000000000000002521 190.0
MMD1_k127_2793350_9 Thioredoxin K03671 - - 0.000000000000000000000000000000000000000003121 158.0
MMD1_k127_2806346_0 General secretory system II, protein E domain protein K02652 - - 9.219e-216 685.0
MMD1_k127_2806346_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 501.0
MMD1_k127_2806346_2 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000008708 184.0
MMD1_k127_285366_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 7.538e-229 729.0
MMD1_k127_285366_1 Histidine kinase K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 359.0
MMD1_k127_285366_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001249 249.0
MMD1_k127_285366_3 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000114 164.0
MMD1_k127_285366_4 - - - - 0.000000000007552 68.0
MMD1_k127_285366_5 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000003128 64.0
MMD1_k127_2856754_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1260.0
MMD1_k127_2856754_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004754 263.0
MMD1_k127_2856754_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.00000000000000000000000000000000000000000000000000000002586 204.0
MMD1_k127_2856754_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000002532 190.0
MMD1_k127_2856754_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000001983 131.0
MMD1_k127_2856754_5 heat shock protein binding - - - 0.000000000000000000000000000005369 129.0
MMD1_k127_2856754_6 - - - - 0.000007411 49.0
MMD1_k127_2870149_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1262.0
MMD1_k127_2870149_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 464.0
MMD1_k127_289744_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 6.527e-297 918.0
MMD1_k127_289744_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.079e-205 648.0
MMD1_k127_289744_10 Nodulation protein S (NodS) - - - 0.00001303 50.0
MMD1_k127_289744_11 Ribosomal RNA adenine dimethylase - - - 0.00008226 45.0
MMD1_k127_289744_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 499.0
MMD1_k127_289744_3 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 318.0
MMD1_k127_289744_4 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000001583 198.0
MMD1_k127_289744_5 PIN domain - - - 0.00000000000000000000000000000000000000000000001226 174.0
MMD1_k127_289744_6 -acetyltransferase - - - 0.00000000000000000000000000000001244 134.0
MMD1_k127_289744_7 - - - - 0.0000000000000000000000000004471 118.0
MMD1_k127_289744_8 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000004183 97.0
MMD1_k127_289744_9 TIR domain - - - 0.0000000000009271 69.0
MMD1_k127_2925352_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.708e-228 714.0
MMD1_k127_2925352_1 Elongator protein 3, MiaB family, Radical SAM K04034 - 1.21.98.3 6.642e-212 667.0
MMD1_k127_2925352_10 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000000000000006546 150.0
MMD1_k127_2925352_11 spore germination - - - 0.0000000000000000000000000000000002047 136.0
MMD1_k127_2925352_12 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000001135 122.0
MMD1_k127_2925352_13 EamA-like transporter family - - - 0.000000000000000003466 89.0
MMD1_k127_2925352_14 phosphorylase K01243 - 3.2.2.9 0.00000007837 63.0
MMD1_k127_2925352_15 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00001369 49.0
MMD1_k127_2925352_2 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 539.0
MMD1_k127_2925352_3 glycosyl transferase family 2 K00720 - 2.4.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 425.0
MMD1_k127_2925352_4 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 414.0
MMD1_k127_2925352_5 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 413.0
MMD1_k127_2925352_6 Peptidase family M23 K21471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001072 255.0
MMD1_k127_2925352_7 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000001086 243.0
MMD1_k127_2925352_8 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000004935 194.0
MMD1_k127_2925352_9 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 - - 0.0000000000000000000000000000000000000000001827 170.0
MMD1_k127_2926724_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1481.0
MMD1_k127_2926724_1 - - - - 0.00001369 49.0
MMD1_k127_2932486_0 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 490.0
MMD1_k127_2932486_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 397.0
MMD1_k127_2932486_2 spermidine synthase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 410.0
MMD1_k127_2932486_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 312.0
MMD1_k127_2932486_4 pfam psp1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001046 256.0
MMD1_k127_2932486_5 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000003775 223.0
MMD1_k127_2932486_6 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000006839 221.0
MMD1_k127_2932486_7 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.00000000000000000000001102 104.0
MMD1_k127_2932486_8 GDP-mannose mannosyl hydrolase activity - - - 0.00000000000000000000001366 102.0
MMD1_k127_2937709_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.209e-293 921.0
MMD1_k127_2937709_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 596.0
MMD1_k127_2937709_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009185 325.0
MMD1_k127_2937709_3 phosphoesterase RecJ domain protein K06881 GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000007524 250.0
MMD1_k127_2937709_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000005795 219.0
MMD1_k127_2937709_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000004873 149.0
MMD1_k127_2937709_6 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000006122 93.0
MMD1_k127_2937709_7 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000263 64.0
MMD1_k127_2937709_8 Protein of unknown function (DUF721) - - - 0.000001651 56.0
MMD1_k127_2938023_0 Bacterial regulatory protein, Fis family - - - 0.000000000000001318 79.0
MMD1_k127_2938023_1 histidine kinase HAMP region domain protein K03406 - - 0.0000002125 63.0
MMD1_k127_2947785_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 487.0
MMD1_k127_2947785_1 Ion channel K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 351.0
MMD1_k127_2968531_0 Glycosyl hydrolases family 15 - - - 7.807e-250 788.0
MMD1_k127_2968531_1 Protein of unknown function, DUF255 K06888 - - 6.146e-238 752.0
MMD1_k127_2968531_10 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000004282 231.0
MMD1_k127_2968531_11 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000002181 224.0
MMD1_k127_2968531_12 cytochrome c biogenesis protein - - - 0.00000000000000000000000000000000000000000002707 169.0
MMD1_k127_2968531_13 Evidence 5 No homology to any previously reported sequences K07156,K07245,K14166 - - 0.00000000000000000000000000000000000768 151.0
MMD1_k127_2968531_14 response to copper ion K07156,K14166 - - 0.0000000000000000000000000000000002438 136.0
MMD1_k127_2968531_15 cytochrome complex assembly - - - 0.0000000000000000000000000000000003396 132.0
MMD1_k127_2968531_16 electron transfer activity K00428 - 1.11.1.5 0.000000000000000000000000001316 116.0
MMD1_k127_2968531_17 - - - - 0.0000000000000000000002164 97.0
MMD1_k127_2968531_18 HD domain - - - 0.0000000000000000002179 99.0
MMD1_k127_2968531_19 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000000000000005243 100.0
MMD1_k127_2968531_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 481.0
MMD1_k127_2968531_20 - - - - 0.0000000000000001988 91.0
MMD1_k127_2968531_21 snoRNA binding - - - 0.00005305 49.0
MMD1_k127_2968531_3 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 432.0
MMD1_k127_2968531_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 370.0
MMD1_k127_2968531_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 351.0
MMD1_k127_2968531_6 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 304.0
MMD1_k127_2968531_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000006897 269.0
MMD1_k127_2968531_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009367 269.0
MMD1_k127_2968531_9 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000002351 250.0
MMD1_k127_3027934_0 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247,K03660 - 3.2.2.21,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 293.0
MMD1_k127_3027934_1 PFAM Cytochrome b5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000018 282.0
MMD1_k127_3027934_2 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004099 233.0
MMD1_k127_3056264_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 365.0
MMD1_k127_3056264_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 363.0
MMD1_k127_3056264_2 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002579 259.0
MMD1_k127_3056264_3 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000004647 205.0
MMD1_k127_3058866_0 alginic acid biosynthetic process - - - 1.833e-281 887.0
MMD1_k127_3058866_1 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 330.0
MMD1_k127_3058866_2 cytochrome c biogenesis protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003582 286.0
MMD1_k127_3058866_4 glycine betaine transport K05845,K05846 - - 0.0000000000000000000000000000000000000000002165 167.0
MMD1_k127_3062745_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1557.0
MMD1_k127_3062745_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 397.0
MMD1_k127_3072672_0 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01905,K09181,K22224 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0032459,GO:0032462,GO:0034212,GO:0036211,GO:0043170,GO:0043254,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052858,GO:0061733,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:1901564 6.2.1.13 1.81e-299 943.0
MMD1_k127_3072672_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 536.0
MMD1_k127_3072672_10 Aconitase C-terminal domain K01681 - 4.2.1.3 0.000000000000002111 76.0
MMD1_k127_3072672_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299,K22341 - 1.17.1.10,1.17.1.11,1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 539.0
MMD1_k127_3072672_3 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 507.0
MMD1_k127_3072672_4 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 425.0
MMD1_k127_3072672_5 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 355.0
MMD1_k127_3072672_6 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000005949 238.0
MMD1_k127_3072672_7 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000001205 160.0
MMD1_k127_3072672_8 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000002432 131.0
MMD1_k127_3072672_9 cheY-homologous receiver domain - - - 0.0000000000000000000000003637 115.0
MMD1_k127_3121097_0 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 300.0
MMD1_k127_3121097_1 PFAM Isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007237 246.0
MMD1_k127_3121097_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000006006 230.0
MMD1_k127_3121097_3 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000003518 130.0
MMD1_k127_3121097_4 - - - - 0.00000000000000000003233 99.0
MMD1_k127_3133466_0 Methyl-viologen-reducing hydrogenase, delta subunit K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1039.0
MMD1_k127_3133466_1 FAD binding domain K00394 - 1.8.99.2 0.0 1025.0
MMD1_k127_3133466_10 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000006852 176.0
MMD1_k127_3133466_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000003316 123.0
MMD1_k127_3133466_12 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191,K07390,K21636 - 1.1.98.6 0.000000000000000000000893 97.0
MMD1_k127_3133466_14 Histidine triad domain protein K02503 - - 0.000000000000002635 77.0
MMD1_k127_3133466_16 Diguanylate cyclase - - - 0.00000001078 63.0
MMD1_k127_3133466_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1024.0
MMD1_k127_3133466_3 Belongs to the sulfate adenylyltransferase family K00958,K13811 - 2.7.1.25,2.7.7.4 1.029e-207 651.0
MMD1_k127_3133466_4 FAD dependent oxidoreductase K16885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 535.0
MMD1_k127_3133466_5 nitrate reductase activity K03390,K16887,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 445.0
MMD1_k127_3133466_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 361.0
MMD1_k127_3133466_7 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 306.0
MMD1_k127_3133466_8 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000006936 250.0
MMD1_k127_3133466_9 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000005657 210.0
MMD1_k127_3152389_0 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 1.293e-234 737.0
MMD1_k127_3152389_1 ATP synthase alpha/beta family, nucleotide-binding domain K02118 - - 7.882e-209 656.0
MMD1_k127_3152389_10 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 444.0
MMD1_k127_3152389_11 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 356.0
MMD1_k127_3152389_12 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 319.0
MMD1_k127_3152389_13 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 315.0
MMD1_k127_3152389_14 Domain of Unknown Function (DUF1259) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 311.0
MMD1_k127_3152389_15 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 293.0
MMD1_k127_3152389_16 ATP synthase subunit D K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002265 261.0
MMD1_k127_3152389_17 Pyruvate phosphate dikinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002742 257.0
MMD1_k127_3152389_18 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005391 259.0
MMD1_k127_3152389_19 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008378 255.0
MMD1_k127_3152389_2 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 5.477e-203 638.0
MMD1_k127_3152389_20 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000992 249.0
MMD1_k127_3152389_21 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005946 240.0
MMD1_k127_3152389_22 Universal stress protein family K07090 - - 0.00000000000000000000000000000000000000000000000000000000001211 217.0
MMD1_k127_3152389_23 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000000001674 210.0
MMD1_k127_3152389_24 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.000000000000000000000000000000000000000000000000007344 182.0
MMD1_k127_3152389_25 Peptidase MA superfamily - - - 0.00000000000000000000000000000000000000000001933 181.0
MMD1_k127_3152389_26 - - - - 0.00000000000000000000000000000000000000006388 160.0
MMD1_k127_3152389_28 - - - - 0.000000000000000000000000000009291 130.0
MMD1_k127_3152389_29 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000002688 115.0
MMD1_k127_3152389_3 glycosyl transferase family 2 K21349 - 2.4.1.268 3.314e-198 625.0
MMD1_k127_3152389_30 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000000000000000000000001567 113.0
MMD1_k127_3152389_31 PFAM membrane protein of K08972 - - 0.000000000000000000000000196 110.0
MMD1_k127_3152389_32 PFAM H transporting two-sector ATPase C subunit K02124 - - 0.000000000000000000000007059 103.0
MMD1_k127_3152389_33 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000000000000000000006487 98.0
MMD1_k127_3152389_34 denitrification pathway - - - 0.0000000000000363 75.0
MMD1_k127_3152389_35 - - - - 0.0000000000009715 73.0
MMD1_k127_3152389_36 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000000002721 69.0
MMD1_k127_3152389_37 MobA-Related Protein K07141 - 2.7.7.76 0.00003726 47.0
MMD1_k127_3152389_38 - - - - 0.00006445 51.0
MMD1_k127_3152389_4 Phosphoglycerate kinase K00927 - 2.7.2.3 3.455e-194 614.0
MMD1_k127_3152389_5 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 609.0
MMD1_k127_3152389_6 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 593.0
MMD1_k127_3152389_7 PFAM V-type ATPase 116 kDa K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 593.0
MMD1_k127_3152389_8 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 524.0
MMD1_k127_3152389_9 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 514.0
MMD1_k127_3168160_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 460.0
MMD1_k127_3168160_1 Beta-ketoacyl synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 369.0
MMD1_k127_3168160_2 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000007501 256.0
MMD1_k127_3168160_3 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.00000000000000000000000000000005457 132.0
MMD1_k127_3168160_4 cyclic nucleotide binding - - - 0.0000000000000000000000002916 115.0
MMD1_k127_3168160_5 acyl carrier protein K02078 - - 0.0004207 45.0
MMD1_k127_3178943_0 Lipoate-protein ligase K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.000000000000000000000000000000000000000000000006274 182.0
MMD1_k127_3178943_1 Predicted RNA-binding protein - - - 0.00000000000001401 76.0
MMD1_k127_3178943_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000005226 60.0
MMD1_k127_3185217_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 3.843e-211 666.0
MMD1_k127_3185217_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 556.0
MMD1_k127_3185217_10 peptidyl-prolyl cis-trans isomerase activity K03769,K07533 - 5.2.1.8 0.0000000000000000000002395 108.0
MMD1_k127_3185217_11 transcription factor binding - - - 0.000000000000000001598 98.0
MMD1_k127_3185217_2 S-adenosylhomocysteine deaminase activity K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 489.0
MMD1_k127_3185217_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 407.0
MMD1_k127_3185217_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000001565 250.0
MMD1_k127_3185217_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000429 230.0
MMD1_k127_3185217_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001297 219.0
MMD1_k127_3185217_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000008326 203.0
MMD1_k127_3185217_8 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000006303 198.0
MMD1_k127_3185217_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000036 166.0
MMD1_k127_3224173_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 517.0
MMD1_k127_3224173_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.000000000000000000000000000000000003266 145.0
MMD1_k127_3224173_3 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000000000000000000000000000001207 137.0
MMD1_k127_3224173_4 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.000000000000000000000000000001996 126.0
MMD1_k127_3224173_5 Type II/IV secretion system protein K02669 - - 0.0000000000000000000002483 98.0
MMD1_k127_3224173_6 OsmC-like protein K07397 - - 0.0000000000001251 71.0
MMD1_k127_3295859_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.221e-238 749.0
MMD1_k127_3295859_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000001949 218.0
MMD1_k127_3295859_2 Oxidoreductase NAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000002857 185.0
MMD1_k127_3295859_3 Dihydroorotate dehydrogenase K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000137 167.0
MMD1_k127_3321511_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 1.459e-205 673.0
MMD1_k127_3321511_1 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 323.0
MMD1_k127_3321511_2 Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB K02014,K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009624 299.0
MMD1_k127_3321511_3 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000009311 246.0
MMD1_k127_3321511_4 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000005401 190.0
MMD1_k127_3321511_5 protein methyltransferase activity K00595 - 2.1.1.132 0.0000000000000000000000000000000000000004419 157.0
MMD1_k127_3321511_6 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000001796 104.0
MMD1_k127_3321511_7 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000002137 105.0
MMD1_k127_3321511_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000004767 77.0
MMD1_k127_333393_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 443.0
MMD1_k127_333393_1 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 354.0
MMD1_k127_333393_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 344.0
MMD1_k127_333393_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000004067 228.0
MMD1_k127_333393_4 mRNA cleavage and polyadenylation factor CLP1 P-loop K06947 - - 0.00000000000000000000000000000003192 137.0
MMD1_k127_333393_5 lyase activity - - - 0.000000000000000000000000004432 126.0
MMD1_k127_333393_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000002293 63.0
MMD1_k127_3344919_0 domain, Protein K01176,K03332 - 3.2.1.1,3.2.1.80 2.876e-232 736.0
MMD1_k127_3344919_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 412.0
MMD1_k127_3344919_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005134 261.0
MMD1_k127_3344919_3 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000002796 185.0
MMD1_k127_3344919_4 lipopolysaccharide transmembrane transporter activity K03303,K07058 - - 0.00000000003123 74.0
MMD1_k127_3344919_5 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.00008725 54.0
MMD1_k127_3387750_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 7.933e-290 901.0
MMD1_k127_3387750_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000959 297.0
MMD1_k127_3387750_2 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004043 238.0
MMD1_k127_3387750_3 Universal stress protein - - - 0.0000000000001206 78.0
MMD1_k127_3387750_4 Short C-terminal domain K08982 - - 0.0000000002637 63.0
MMD1_k127_3387750_5 Acetyltransferases including N-acetylases of ribosomal proteins K00657 - 2.3.1.57 0.00000001536 63.0
MMD1_k127_3432604_0 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000005075 214.0
MMD1_k127_3432604_1 redox protein, regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000000005633 190.0
MMD1_k127_3432604_2 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000009971 130.0
MMD1_k127_3432604_3 Short C-terminal domain K08982 - - 0.00000000000000002653 83.0
MMD1_k127_3609492_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000001172 215.0
MMD1_k127_3609492_1 polysaccharide export K01991 - - 0.00000000000000000000000000000000000000000000000000007933 199.0
MMD1_k127_3609492_2 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000003777 169.0
MMD1_k127_3609492_3 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.000000000000000000000000000000001559 137.0
MMD1_k127_3609492_4 iron ion homeostasis - - - 0.0001232 53.0
MMD1_k127_3619106_0 alpha amylase, catalytic K01236 - 3.2.1.141 1.914e-245 774.0
MMD1_k127_3619106_1 Belongs to the glycosyl hydrolase 57 family - - - 1.392e-230 719.0
MMD1_k127_3619106_2 Histidine kinase K07646 - 2.7.13.3 1.362e-213 681.0
MMD1_k127_3619106_3 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 603.0
MMD1_k127_3619106_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001675 249.0
MMD1_k127_3639917_0 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006931 266.0
MMD1_k127_3639917_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002805 226.0
MMD1_k127_3639917_2 B12 binding domain - - - 0.0000000000000000000000000000000000000000000005899 173.0
MMD1_k127_3639917_3 PFAM response regulator receiver K03413 - - 0.000000000000000000000007793 105.0
MMD1_k127_3654338_0 Domain in cystathionine beta-synthase and other proteins. K07182 - - 1.483e-240 759.0
MMD1_k127_3654338_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000001248 168.0
MMD1_k127_3654338_2 Protein of unknown function, DUF485 - - - 0.000000000000000000000000009699 113.0
MMD1_k127_3662414_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 1.986e-220 689.0
MMD1_k127_3662414_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 540.0
MMD1_k127_3662414_2 ThiS family K03636 - - 0.0000000000000000000000000000000001095 136.0
MMD1_k127_3662414_3 JAB/MPN domain K21140 - 3.13.1.6 0.000000000000000000000000000009562 124.0
MMD1_k127_3662414_4 phosphoglycerate mutase K15635 - 5.4.2.12 0.0000000000000000000001256 99.0
MMD1_k127_3662414_5 methionine transport K02071 - - 0.0000000000003898 74.0
MMD1_k127_3662414_6 The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.80,2.8.1.11 0.0000000001394 66.0
MMD1_k127_3675171_0 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 464.0
MMD1_k127_3675171_1 PFAM glycosyl transferase, family 9 K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 410.0
MMD1_k127_3675171_10 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000001316 206.0
MMD1_k127_3675171_11 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000002576 194.0
MMD1_k127_3675171_2 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 406.0
MMD1_k127_3675171_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 395.0
MMD1_k127_3675171_4 transferase activity, transferring glycosyl groups K02844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 398.0
MMD1_k127_3675171_5 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 361.0
MMD1_k127_3675171_6 biosynthesis glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 300.0
MMD1_k127_3675171_7 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 304.0
MMD1_k127_3675171_8 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004155 282.0
MMD1_k127_3675171_9 Glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008679 276.0
MMD1_k127_3676397_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 528.0
MMD1_k127_3676397_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 444.0
MMD1_k127_3682902_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.342e-201 649.0
MMD1_k127_3682902_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 4.032e-197 629.0
MMD1_k127_3682902_10 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000001994 137.0
MMD1_k127_3682902_11 conserved protein (DUF2249) K07322 - - 0.0000000000000000000000000001849 115.0
MMD1_k127_3682902_12 - - - - 0.000000000000000000000008344 106.0
MMD1_k127_3682902_13 Domain of unknown function (DUF1858) - - - 0.0000000000000000005572 90.0
MMD1_k127_3682902_14 helix_turn_helix, cAMP Regulatory protein - - - 0.00000005622 55.0
MMD1_k127_3682902_17 - - - - 0.0000418 49.0
MMD1_k127_3682902_2 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 514.0
MMD1_k127_3682902_3 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 442.0
MMD1_k127_3682902_4 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 421.0
MMD1_k127_3682902_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 358.0
MMD1_k127_3682902_6 DNA-3-methyladenine glycosylase activity K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 291.0
MMD1_k127_3682902_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000008085 262.0
MMD1_k127_3682902_8 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001403 224.0
MMD1_k127_3682902_9 4fe-4S ferredoxin, iron-sulfur binding domain protein K02572 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0044424,GO:0044464,GO:0050896 - 0.00000000000000000000000000000000000005881 148.0
MMD1_k127_3683491_0 CO-methylating acetyl-CoA synthase activity K00193,K14138 - 2.3.1.169 1.142e-258 813.0
MMD1_k127_3683491_1 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 401.0
MMD1_k127_3683778_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 482.0
MMD1_k127_3683778_1 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 409.0
MMD1_k127_3683778_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 309.0
MMD1_k127_3683778_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001826 241.0
MMD1_k127_3683778_4 PFAM diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.00000000000000000000000000000000000000000000000009015 185.0
MMD1_k127_3683778_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K03474,K03595,K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 0.000000000000000000002057 99.0
MMD1_k127_3704310_0 Sugar (and other) transporter K03446 - - 1.021e-241 755.0
MMD1_k127_3704310_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 482.0
MMD1_k127_3704310_10 MarC family integral membrane protein - - - 0.000000000000000000000000000000000000000001057 163.0
MMD1_k127_3704310_11 - - - - 0.00000000000000009558 87.0
MMD1_k127_3704310_12 - - - - 0.0000006516 51.0
MMD1_k127_3704310_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 434.0
MMD1_k127_3704310_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 396.0
MMD1_k127_3704310_4 HlyD membrane-fusion protein of T1SS K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 398.0
MMD1_k127_3704310_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 334.0
MMD1_k127_3704310_6 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 299.0
MMD1_k127_3704310_7 MazG nucleotide pyrophosphohydrolase domain K02499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 298.0
MMD1_k127_3704310_8 transcriptional regulator - GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001798 252.0
MMD1_k127_3704310_9 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001109 250.0
MMD1_k127_3716357_0 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 568.0
MMD1_k127_3716357_1 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 531.0
MMD1_k127_3716357_2 e3 binding domain K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 492.0
MMD1_k127_3716357_3 TraB family K09973 - - 0.0000000000000000000000000000000000007625 147.0
MMD1_k127_3716357_4 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000000000000668 121.0
MMD1_k127_3716357_5 Type II secretion system protein B K02451 - - 0.000000000000000000001217 105.0
MMD1_k127_3716357_6 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000013 101.0
MMD1_k127_3739297_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 583.0
MMD1_k127_3739297_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 430.0
MMD1_k127_3739297_2 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000007225 120.0
MMD1_k127_3739297_3 rod shape-determining protein MreD K03571 - - 0.0001133 50.0
MMD1_k127_3745759_0 PFAM Polysulphide reductase, NrfD K00185 - - 1.402e-220 698.0
MMD1_k127_3745759_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 2.247e-204 642.0
MMD1_k127_3745759_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000007301 96.0
MMD1_k127_3745759_11 EamA-like transporter family - - - 0.0000000000000004877 81.0
MMD1_k127_3745759_2 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 428.0
MMD1_k127_3745759_3 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 334.0
MMD1_k127_3745759_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 314.0
MMD1_k127_3745759_5 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009309 271.0
MMD1_k127_3745759_6 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000005666 251.0
MMD1_k127_3745759_7 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000001539 240.0
MMD1_k127_3745759_8 iron-sulfur cluster assembly - - - 0.00000000000000000000000003248 109.0
MMD1_k127_3745759_9 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.0000000000000000000000001645 118.0
MMD1_k127_3751725_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 611.0
MMD1_k127_3751725_1 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 475.0
MMD1_k127_3751725_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 453.0
MMD1_k127_3751725_3 Phosphonate ABC transporter, periplasmic K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 341.0
MMD1_k127_3751725_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007533 276.0
MMD1_k127_3751725_5 CHASE K02488,K21009 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000002808 205.0
MMD1_k127_3754733_0 Domain of Unknown Function (DUF748) - - - 3.944e-264 855.0
MMD1_k127_3754733_1 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 364.0
MMD1_k127_3754733_2 membrane K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 374.0
MMD1_k127_3754733_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000009472 227.0
MMD1_k127_3754733_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000001445 164.0
MMD1_k127_37746_0 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 342.0
MMD1_k127_37746_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 302.0
MMD1_k127_37746_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 300.0
MMD1_k127_37746_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 298.0
MMD1_k127_37746_4 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 286.0
MMD1_k127_37746_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006624 274.0
MMD1_k127_37746_6 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001466 255.0
MMD1_k127_37746_7 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000002661 83.0
MMD1_k127_37746_8 His Kinase A (phosphoacceptor) domain - - - 0.00000009861 61.0
MMD1_k127_3784847_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 469.0
MMD1_k127_3784847_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000421 263.0
MMD1_k127_3797166_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 9.163e-223 700.0
MMD1_k127_3797166_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 466.0
MMD1_k127_3797166_2 response regulator receiver K02481,K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 426.0
MMD1_k127_3797166_3 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 362.0
MMD1_k127_3797166_4 CHASE K02488,K21009 - 2.7.7.65 0.00000000000000000000000000000000000000000001646 175.0
MMD1_k127_3797166_5 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000006565 117.0
MMD1_k127_3797166_6 CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.00000000000000000000002387 102.0
MMD1_k127_3797166_7 cyclic nucleotide binding K00384,K01420 - 1.8.1.9 0.000000000000001662 78.0
MMD1_k127_3827444_0 Elongation factor G, domain IV K02355 - - 1.271e-301 940.0
MMD1_k127_3827444_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 5.077e-261 822.0
MMD1_k127_3827444_10 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 315.0
MMD1_k127_3827444_11 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000001835 229.0
MMD1_k127_3827444_12 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000001004 150.0
MMD1_k127_3827444_13 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000002958 110.0
MMD1_k127_3827444_14 SMART Cold shock protein K03704 - - 0.0000000000000000000000001018 107.0
MMD1_k127_3827444_15 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.0000000000000000000004796 101.0
MMD1_k127_3827444_16 Cupin 2, conserved barrel domain protein - - - 0.000000000006706 66.0
MMD1_k127_3827444_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.883e-220 699.0
MMD1_k127_3827444_3 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 580.0
MMD1_k127_3827444_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 444.0
MMD1_k127_3827444_5 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 433.0
MMD1_k127_3827444_6 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 413.0
MMD1_k127_3827444_7 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 386.0
MMD1_k127_3827444_8 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 370.0
MMD1_k127_3827444_9 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 349.0
MMD1_k127_3827603_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0 1157.0
MMD1_k127_3827603_1 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 1.659e-318 981.0
MMD1_k127_3827603_10 Epimerase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 312.0
MMD1_k127_3827603_11 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000004496 265.0
MMD1_k127_3827603_12 Thrombospondin type 1 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000004695 228.0
MMD1_k127_3827603_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000004093 206.0
MMD1_k127_3827603_14 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000006375 182.0
MMD1_k127_3827603_15 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000005679 176.0
MMD1_k127_3827603_16 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000005154 163.0
MMD1_k127_3827603_17 - - - - 0.0000000000000000000000000000000000003353 157.0
MMD1_k127_3827603_18 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000002141 112.0
MMD1_k127_3827603_19 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000019 105.0
MMD1_k127_3827603_2 FMN binding - - - 3.397e-281 870.0
MMD1_k127_3827603_20 PFAM Transglycosylase-associated protein - - - 0.000000000000000000000004926 104.0
MMD1_k127_3827603_22 sodium-dependent phosphate transmembrane transporter activity - - - 0.000000000000002581 84.0
MMD1_k127_3827603_24 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000002971 75.0
MMD1_k127_3827603_26 Acetyltransferase (GNAT) domain - - - 0.0000009166 57.0
MMD1_k127_3827603_27 protein conserved in bacteria - - - 0.00001322 57.0
MMD1_k127_3827603_28 Phosphonate ABC transporter, periplasmic K02044 - - 0.0000138 49.0
MMD1_k127_3827603_29 Recombinase - - - 0.00003017 46.0
MMD1_k127_3827603_3 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 513.0
MMD1_k127_3827603_30 - - - - 0.0003688 44.0
MMD1_k127_3827603_4 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 433.0
MMD1_k127_3827603_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 428.0
MMD1_k127_3827603_6 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 422.0
MMD1_k127_3827603_7 Ribonuclease R winged-helix domain K09720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 396.0
MMD1_k127_3827603_8 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 384.0
MMD1_k127_3827603_9 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 330.0
MMD1_k127_3848891_0 Dehydratase family K01687 - 4.2.1.9 1.908e-268 834.0
MMD1_k127_3848891_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 460.0
MMD1_k127_3848891_2 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 365.0
MMD1_k127_3848891_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 302.0
MMD1_k127_3848891_4 response regulator K11443 - - 0.00000000000000000001258 96.0
MMD1_k127_3848891_6 7TM diverse intracellular signalling K19694 - - 0.00000000002157 64.0
MMD1_k127_3881604_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006571 257.0
MMD1_k127_3881604_1 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000933 244.0
MMD1_k127_3881604_2 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000001988 189.0
MMD1_k127_3881604_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000001098 143.0
MMD1_k127_3881604_4 response regulator, receiver - - - 0.0000000000000005618 82.0
MMD1_k127_3881604_5 23S rRNA-intervening sequence protein - - - 0.00000000006736 65.0
MMD1_k127_3889965_0 Transposase DDE domain K07487 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004775 279.0
MMD1_k127_3889965_1 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004161 255.0
MMD1_k127_3889965_2 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000001947 88.0
MMD1_k127_3889965_3 COG3666 Transposase and inactivated derivatives - - - 0.00009869 55.0
MMD1_k127_3917214_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 1.734e-228 722.0
MMD1_k127_3917214_1 Ribosomal protein S1 K02945,K03527,K07571 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 572.0
MMD1_k127_3917214_10 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000003108 256.0
MMD1_k127_3917214_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000005776 218.0
MMD1_k127_3917214_12 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000006791 218.0
MMD1_k127_3917214_13 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000002126 216.0
MMD1_k127_3917214_14 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000006472 209.0
MMD1_k127_3917214_15 photosystem II stabilization K02237 - - 0.00000000000000000000000000000000000000000000002172 182.0
MMD1_k127_3917214_16 Bacterial protein of unknown function (DUF937) - - - 0.00000000000000000000000000000000000101 145.0
MMD1_k127_3917214_17 bacterial (prokaryotic) histone like domain K05788 - - 0.0000000000000000000000000001956 116.0
MMD1_k127_3917214_18 - - - - 0.000000000000000000000000007658 112.0
MMD1_k127_3917214_19 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000006274 88.0
MMD1_k127_3917214_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 541.0
MMD1_k127_3917214_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 455.0
MMD1_k127_3917214_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 443.0
MMD1_k127_3917214_5 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 435.0
MMD1_k127_3917214_6 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 415.0
MMD1_k127_3917214_7 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 350.0
MMD1_k127_3917214_8 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 326.0
MMD1_k127_3917214_9 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 321.0
MMD1_k127_3963949_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 418.0
MMD1_k127_3963949_1 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000006845 203.0
MMD1_k127_408376_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 5.572e-275 865.0
MMD1_k127_408376_1 NADH-quinone oxidoreductase K00341 - 1.6.5.3 1.037e-239 756.0
MMD1_k127_408376_10 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 350.0
MMD1_k127_408376_11 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 333.0
MMD1_k127_408376_12 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 309.0
MMD1_k127_408376_13 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 324.0
MMD1_k127_408376_14 leucyltransferase activity K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 299.0
MMD1_k127_408376_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 281.0
MMD1_k127_408376_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000002176 222.0
MMD1_k127_408376_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000002953 200.0
MMD1_k127_408376_18 PFAM PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000006895 195.0
MMD1_k127_408376_19 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.00000000000000000000000000000000000000000000000009022 183.0
MMD1_k127_408376_2 4Fe-4S binding domain - - - 2.142e-227 714.0
MMD1_k127_408376_20 Domain in cystathionine beta-synthase and other proteins. K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000002984 170.0
MMD1_k127_408376_21 Adenylylsulphate kinase K00860 - 2.7.1.25 0.00000000000000000000000000000000000000001031 159.0
MMD1_k127_408376_22 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000005845 156.0
MMD1_k127_408376_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000002834 147.0
MMD1_k127_408376_24 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.00000000000000000000000000000000003705 144.0
MMD1_k127_408376_25 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000002448 131.0
MMD1_k127_408376_26 phosphorelay signal transduction system K02437 - - 0.00000000000000000000000000001617 121.0
MMD1_k127_408376_27 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000002817 120.0
MMD1_k127_408376_28 Histidine kinase - - - 0.000000000000000000000000001879 113.0
MMD1_k127_408376_29 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000000000000000000000002044 116.0
MMD1_k127_408376_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 - 1.6.5.3 9.075e-205 648.0
MMD1_k127_408376_30 DRTGG domain - - - 0.00000000000000000000000001149 112.0
MMD1_k127_408376_31 phosphorelay signal transduction system - - - 0.0000000000000000000000001807 115.0
MMD1_k127_408376_32 Transcriptional regulator, Crp Fnr family K10914 - - 0.000000000002551 73.0
MMD1_k127_408376_33 - - - - 0.000000000613 66.0
MMD1_k127_408376_34 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 - - 0.00000008294 59.0
MMD1_k127_408376_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 558.0
MMD1_k127_408376_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007783 467.0
MMD1_k127_408376_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 438.0
MMD1_k127_408376_7 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 412.0
MMD1_k127_408376_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 381.0
MMD1_k127_408376_9 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 360.0
MMD1_k127_4110378_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1439.0
MMD1_k127_4110378_1 cell redox homeostasis - - - 6.82e-224 702.0
MMD1_k127_4110378_10 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000005078 230.0
MMD1_k127_4110378_11 Nitroreductase family K04719 - 1.13.11.79 0.000000000000000000000000000000000000000000000000000000000000001314 225.0
MMD1_k127_4110378_12 Domain of unknown function (DUF296) - - - 0.00000000000000000000000000000000000000000000000000000000002298 209.0
MMD1_k127_4110378_13 protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000001317 196.0
MMD1_k127_4110378_14 COG1252 NADH dehydrogenase, FAD-containing subunit K03885 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0036094,GO:0042592,GO:0043167,GO:0043168,GO:0044237,GO:0044425,GO:0044464,GO:0045333,GO:0048037,GO:0048878,GO:0050136,GO:0050660,GO:0050662,GO:0050801,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0097159,GO:0098771,GO:0098796,GO:1901265,GO:1901363,GO:1902494 1.6.99.3 0.0000000000000000000000000000000000000000000000001126 192.0
MMD1_k127_4110378_15 Type II secretion system (T2SS), protein G K02456 - - 0.0000000000000000000000000000000000000000003892 162.0
MMD1_k127_4110378_16 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000006037 126.0
MMD1_k127_4110378_17 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000002494 78.0
MMD1_k127_4110378_18 Glutaredoxin - - - 0.000000002085 61.0
MMD1_k127_4110378_19 Cupin domain - - - 0.000002231 52.0
MMD1_k127_4110378_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 474.0
MMD1_k127_4110378_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 392.0
MMD1_k127_4110378_4 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 341.0
MMD1_k127_4110378_5 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 299.0
MMD1_k127_4110378_6 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 293.0
MMD1_k127_4110378_7 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009677 286.0
MMD1_k127_4110378_8 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001873 285.0
MMD1_k127_4110378_9 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000016 259.0
MMD1_k127_4115931_0 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000004799 183.0
MMD1_k127_4115931_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000006759 159.0
MMD1_k127_4115931_4 - - - - 0.0003189 45.0
MMD1_k127_4122767_0 CHASE2 K01768 - 4.6.1.1 5.656e-230 734.0
MMD1_k127_4122767_1 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 6.198e-195 616.0
MMD1_k127_4122767_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 448.0
MMD1_k127_4122767_3 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 418.0
MMD1_k127_4122767_4 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 288.0
MMD1_k127_4122767_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 291.0
MMD1_k127_4122767_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000004776 229.0
MMD1_k127_4122767_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000006666 196.0
MMD1_k127_4122767_8 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000005095 103.0
MMD1_k127_41375_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 304.0
MMD1_k127_41375_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003581 263.0
MMD1_k127_41375_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000004836 182.0
MMD1_k127_4153909_0 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000006635 160.0
MMD1_k127_4153909_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000001853 143.0
MMD1_k127_4153909_2 Cation efflux family - - - 0.00000008907 55.0
MMD1_k127_4159398_0 Transport of potassium into the cell K03549 - - 8.65e-249 782.0
MMD1_k127_4159398_1 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 424.0
MMD1_k127_4159398_2 Protein of unknown function (DUF2934) - - - 0.0001123 48.0
MMD1_k127_4159398_3 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0006373 44.0
MMD1_k127_4235939_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 3.5e-294 912.0
MMD1_k127_4235939_1 methylase K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 364.0
MMD1_k127_4235939_2 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000009678 262.0
MMD1_k127_4235939_3 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K03177,K11131 - 5.4.99.25 0.000000000000000000000000000000000000000000000000003146 187.0
MMD1_k127_4245969_0 PFAM glycosyl transferase, family 9 K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 358.0
MMD1_k127_4245969_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000002812 162.0
MMD1_k127_4312321_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000001169 233.0
MMD1_k127_4312321_1 6-carboxyhexanoate--CoA ligase K01906 - 6.2.1.14 0.000000000000000000000000000000000000000000000000000000003968 208.0
MMD1_k127_4312321_2 Uncharacterised protein family UPF0047 - - - 0.00000002815 55.0
MMD1_k127_4333478_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 451.0
MMD1_k127_4333478_1 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000001663 196.0
MMD1_k127_4333478_2 PFAM Metal-dependent phosphohydrolase, HD K07141 - 2.7.7.76 0.0000000000000005769 79.0
MMD1_k127_4340670_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.698e-233 757.0
MMD1_k127_4340670_1 Tetratricopeptide repeat - - - 0.0000001665 58.0
MMD1_k127_4340670_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000007517 48.0
MMD1_k127_4364309_0 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 404.0
MMD1_k127_4364309_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 355.0
MMD1_k127_4364309_2 metalloendopeptidase activity K03799 - - 0.000000000000000001706 97.0
MMD1_k127_4364309_3 Class III cytochrome C family - - - 0.000000000000001298 83.0
MMD1_k127_4364309_4 HEAT-like repeat - - - 0.0000000000001142 80.0
MMD1_k127_4372403_0 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 486.0
MMD1_k127_4372403_1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 362.0
MMD1_k127_4372403_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001735 288.0
MMD1_k127_4372403_3 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007905 264.0
MMD1_k127_4372403_4 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009409 260.0
MMD1_k127_4372403_5 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000003713 179.0
MMD1_k127_4372403_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000001744 175.0
MMD1_k127_4372403_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000006915 71.0
MMD1_k127_4372403_8 PFAM amino acid-binding ACT domain protein - - - 0.00001639 54.0
MMD1_k127_4377691_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 576.0
MMD1_k127_4377691_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 493.0
MMD1_k127_4377691_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 425.0
MMD1_k127_4377691_3 2Fe-2S iron-sulfur cluster binding domain K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 406.0
MMD1_k127_4377691_4 pfam abc K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 374.0
MMD1_k127_4377691_5 Phosphoesterase PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 338.0
MMD1_k127_4377691_6 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 327.0
MMD1_k127_4377691_7 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 326.0
MMD1_k127_4377691_8 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001308 260.0
MMD1_k127_4395585_0 COG0058 Glucan phosphorylase - - - 1.406e-263 822.0
MMD1_k127_4395585_1 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 342.0
MMD1_k127_4395585_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000002827 73.0
MMD1_k127_4408739_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 478.0
MMD1_k127_4408739_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 385.0
MMD1_k127_4408739_2 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 291.0
MMD1_k127_4408739_3 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
MMD1_k127_4408739_4 cheY-homologous receiver domain - - - 0.000002495 58.0
MMD1_k127_4414736_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 350.0
MMD1_k127_4414736_1 HEAT repeats - - - 0.000000000000000000000000003538 119.0
MMD1_k127_4441590_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1140.0
MMD1_k127_4441590_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 2.611e-257 815.0
MMD1_k127_4441590_10 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000008589 59.0
MMD1_k127_4441590_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 565.0
MMD1_k127_4441590_3 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 516.0
MMD1_k127_4441590_4 - K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 427.0
MMD1_k127_4441590_5 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 286.0
MMD1_k127_4441590_6 Membrane - - - 0.00000000000000000000000001956 116.0
MMD1_k127_4441590_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000001426 95.0
MMD1_k127_4441590_8 YtxH-like protein - - - 0.00000000000000000189 89.0
MMD1_k127_4441590_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000305 76.0
MMD1_k127_4445305_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002274 264.0
MMD1_k127_4445305_1 Curli production assembly transport component CsgG K04087 - - 0.000000000000000000000000000000000000000000000000000000000000006813 227.0
MMD1_k127_4445305_10 FecR protein - - - 0.00004089 55.0
MMD1_k127_4445305_2 12 heme-binding sites - - - 0.00000000000000000000000000000000000000006453 160.0
MMD1_k127_4445305_3 - - - - 0.0000000000000000000001419 102.0
MMD1_k127_4445305_4 Secretin and TonB N terminus short domain K02507,K02666 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.0000000000004723 74.0
MMD1_k127_4445305_5 LPP20 lipoprotein K09860 - - 0.000000000003681 76.0
MMD1_k127_4445305_6 - - - - 0.000000000003681 76.0
MMD1_k127_4445305_7 Prokaryotic cytochrome b561 - - - 0.00000142 52.0
MMD1_k127_4445305_8 LPP20 lipoprotein - - - 0.000004771 55.0
MMD1_k127_4445305_9 Secretin and TonB N terminus short domain K02666 - - 0.00002914 51.0
MMD1_k127_4468015_0 Beta Propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 539.0
MMD1_k127_4468015_1 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 464.0
MMD1_k127_4468015_10 - - - - 0.0002948 47.0
MMD1_k127_4468015_2 ribonuclease BN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 293.0
MMD1_k127_4468015_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000007702 211.0
MMD1_k127_4468015_4 PFAM thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000000001389 162.0
MMD1_k127_4468015_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000001271 158.0
MMD1_k127_4468015_6 cyclic diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000001434 167.0
MMD1_k127_4468015_7 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000001939 137.0
MMD1_k127_4468015_8 phosphorelay signal transduction system - - - 0.0000000000000000000001358 106.0
MMD1_k127_4468015_9 HEAT repeats - - - 0.000000000003919 80.0
MMD1_k127_45085_0 ABC transporter K06158 - - 4.81e-220 699.0
MMD1_k127_45085_1 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 569.0
MMD1_k127_45085_10 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000008474 198.0
MMD1_k127_45085_11 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000000000000000007776 172.0
MMD1_k127_45085_12 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000001094 163.0
MMD1_k127_45085_13 SMART Cold shock protein K03704 - - 0.000000000000000000000000004803 110.0
MMD1_k127_45085_14 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000001968 98.0
MMD1_k127_45085_15 - - - - 0.0000000000000009668 79.0
MMD1_k127_45085_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 492.0
MMD1_k127_45085_3 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 479.0
MMD1_k127_45085_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 387.0
MMD1_k127_45085_5 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 290.0
MMD1_k127_45085_6 Thioesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000000000000000000000000000000006622 222.0
MMD1_k127_45085_7 CGGC - - - 0.0000000000000000000000000000000000000000000000000000000000002116 214.0
MMD1_k127_45085_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000242 212.0
MMD1_k127_45085_9 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000001199 215.0
MMD1_k127_4510674_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 397.0
MMD1_k127_4510674_1 His Kinase A (phosphoacceptor) domain K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000956 277.0
MMD1_k127_4513456_0 Domain of unknown function (DUF3458_C) ARM repeats K01256,K08776 - 3.4.11.2 0.0 1251.0
MMD1_k127_4513456_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 - 1.4.1.2,1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 428.0
MMD1_k127_4513456_2 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 329.0
MMD1_k127_4513456_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000003532 270.0
MMD1_k127_4513456_4 CHASE K02488,K21009 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000001156 218.0
MMD1_k127_4513456_5 Protein of unknown function (DUF1189) - - - 0.00000000000000000004791 100.0
MMD1_k127_4513456_6 response regulator receiver K02483 - - 0.0009687 42.0
MMD1_k127_455426_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.32e-254 794.0
MMD1_k127_4561003_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 0.0 1028.0
MMD1_k127_4561003_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 7.751e-231 721.0
MMD1_k127_4561003_10 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003554 279.0
MMD1_k127_4561003_11 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000008999 241.0
MMD1_k127_4561003_12 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000644 232.0
MMD1_k127_4561003_13 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000009285 234.0
MMD1_k127_4561003_14 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000001845 228.0
MMD1_k127_4561003_15 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000009253 226.0
MMD1_k127_4561003_16 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000001332 228.0
MMD1_k127_4561003_17 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000005741 217.0
MMD1_k127_4561003_18 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001932 201.0
MMD1_k127_4561003_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000003317 198.0
MMD1_k127_4561003_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 4.632e-219 685.0
MMD1_k127_4561003_20 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002064 197.0
MMD1_k127_4561003_21 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000002909 188.0
MMD1_k127_4561003_22 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000001226 185.0
MMD1_k127_4561003_23 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000000000000000000000000000000005426 180.0
MMD1_k127_4561003_24 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000006449 173.0
MMD1_k127_4561003_25 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000001171 174.0
MMD1_k127_4561003_26 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000001447 170.0
MMD1_k127_4561003_27 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000001609 159.0
MMD1_k127_4561003_28 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000007473 162.0
MMD1_k127_4561003_29 - - - - 0.00000000000000000000000000000000000000002173 160.0
MMD1_k127_4561003_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 407.0
MMD1_k127_4561003_30 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000002798 148.0
MMD1_k127_4561003_31 GYD domain - - - 0.000000000000000000000000000000000001966 140.0
MMD1_k127_4561003_32 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000002474 132.0
MMD1_k127_4561003_34 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000003932 126.0
MMD1_k127_4561003_35 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000007769 114.0
MMD1_k127_4561003_36 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001585 107.0
MMD1_k127_4561003_37 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000004691 104.0
MMD1_k127_4561003_38 - - - - 0.00000000000000000001477 92.0
MMD1_k127_4561003_39 Rubredoxin - - - 0.0000000000000000002499 89.0
MMD1_k127_4561003_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 363.0
MMD1_k127_4561003_40 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000001267 85.0
MMD1_k127_4561003_41 AhpC/TSA family K03386 - 1.11.1.15 0.00000000000000009465 81.0
MMD1_k127_4561003_42 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000006027 73.0
MMD1_k127_4561003_43 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000008017 68.0
MMD1_k127_4561003_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 330.0
MMD1_k127_4561003_6 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 328.0
MMD1_k127_4561003_7 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 291.0
MMD1_k127_4561003_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 284.0
MMD1_k127_4561003_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001328 282.0
MMD1_k127_4579471_0 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 322.0
MMD1_k127_4579471_1 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008366 266.0
MMD1_k127_4579471_2 SurA N-terminal domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000007022 222.0
MMD1_k127_4579871_0 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 437.0
MMD1_k127_4579871_1 Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 376.0
MMD1_k127_4579871_10 OsmC-like protein - - - 0.000000000000000001775 92.0
MMD1_k127_4579871_11 response regulator receiver K02481,K07713 - - 0.0001474 50.0
MMD1_k127_4579871_2 Methionine synthase, cobalamin (vitamin B12)-binding module, cap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 327.0
MMD1_k127_4579871_3 Methylenetetrahydrofolate reductase K00297 GO:0003674,GO:0003824,GO:0004489,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 315.0
MMD1_k127_4579871_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 311.0
MMD1_k127_4579871_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000254 215.0
MMD1_k127_4579871_6 TIGRFAM iron-sulfur cluster binding protein - - - 0.00000000000000000000000000000000000000000000007978 176.0
MMD1_k127_4579871_7 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000001603 171.0
MMD1_k127_4579871_8 PFAM Carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000000000000004081 160.0
MMD1_k127_4579871_9 cobalamin synthesis protein, P47K - - - 0.00000000000000000000000000000000000000009801 167.0
MMD1_k127_4611373_0 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 504.0
MMD1_k127_4611373_1 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 480.0
MMD1_k127_4611373_2 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002913 273.0
MMD1_k127_4611373_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000005797 121.0
MMD1_k127_4622726_0 4Fe-4S dicluster domain - - - 9.696e-301 928.0
MMD1_k127_4622726_1 Flavodoxin - - - 1.146e-209 657.0
MMD1_k127_4622726_10 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001771 266.0
MMD1_k127_4622726_11 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003873 258.0
MMD1_k127_4622726_12 Tetratricopeptide repeat K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000005025 229.0
MMD1_k127_4622726_13 - - - - 0.000000000000000000000000000000000000000000000000000006874 192.0
MMD1_k127_4622726_14 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.00000000000000000000000000000000000000000000000009813 180.0
MMD1_k127_4622726_15 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.0000000000000000000000000000000000000000000000005576 177.0
MMD1_k127_4622726_16 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000001606 173.0
MMD1_k127_4622726_17 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000000000000000003664 173.0
MMD1_k127_4622726_18 Putative NAD(P)-binding K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000518 172.0
MMD1_k127_4622726_19 belongs to the Fur family K09825 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2000374,GO:2001141 - 0.00000000000000000000000000000000000000000001458 165.0
MMD1_k127_4622726_2 Nitrite and sulphite reductase 4Fe-4S K11180 - 1.8.99.5 2.029e-208 652.0
MMD1_k127_4622726_20 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000003381 150.0
MMD1_k127_4622726_21 Universal stress protein family - - - 0.00000000000000000000000000000000000002192 148.0
MMD1_k127_4622726_22 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000006823 141.0
MMD1_k127_4622726_23 PFAM Glutaredoxin K06191 - - 0.0000000000000000000000000000006024 123.0
MMD1_k127_4622726_24 cheY-homologous receiver domain - - - 0.00000000000000000000000142 113.0
MMD1_k127_4622726_25 BON domain - - - 0.0000000000000000000000222 107.0
MMD1_k127_4622726_26 lyase activity - - - 0.00000000000000000408 88.0
MMD1_k127_4622726_27 4Fe-4S binding domain - - - 0.000000000000000008043 84.0
MMD1_k127_4622726_29 Tetratricopeptide repeat - - - 0.000000000003271 76.0
MMD1_k127_4622726_3 Nitrite and sulphite reductase 4Fe-4S K11181 - 1.8.99.5 8.105e-198 620.0
MMD1_k127_4622726_30 sulfur carrier activity - GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.000000001036 63.0
MMD1_k127_4622726_31 DsrE/DsrF-like family K07235 - - 0.0000001141 58.0
MMD1_k127_4622726_32 Lipase (class 2) - - - 0.0000001242 63.0
MMD1_k127_4622726_34 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions K07237 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.0006584 46.0
MMD1_k127_4622726_35 Belongs to the DsrF TusC family K07236 - - 0.0006629 48.0
MMD1_k127_4622726_4 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 543.0
MMD1_k127_4622726_5 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 515.0
MMD1_k127_4622726_6 PFAM Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 449.0
MMD1_k127_4622726_7 MCP methyltransferase, CheR-type K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 425.0
MMD1_k127_4622726_8 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 396.0
MMD1_k127_4622726_9 TIGRFAM Tat (twin-arginine translocation) pathway signal sequence K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 353.0
MMD1_k127_4633663_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 351.0
MMD1_k127_4633663_1 PFAM cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 342.0
MMD1_k127_4633663_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008801 328.0
MMD1_k127_4633663_3 - - - - 0.00000000000000000000000000159 116.0
MMD1_k127_4633663_4 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000001447 103.0
MMD1_k127_4633663_5 N-terminal domain of cytochrome oxidase-cbb3, FixP - - - 0.000000000000005486 76.0
MMD1_k127_4633663_6 FixH - - - 0.00000000000001258 79.0
MMD1_k127_4647432_0 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 386.0
MMD1_k127_4647432_1 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 295.0
MMD1_k127_4647432_2 Glycosyl transferase family 2 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000001132 243.0
MMD1_k127_4700198_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 5.358e-295 918.0
MMD1_k127_4700198_1 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001683 284.0
MMD1_k127_4700198_2 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000249 157.0
MMD1_k127_4700198_3 - - - - 0.0000000000000000000000000000000000733 140.0
MMD1_k127_4700198_4 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000001087 124.0
MMD1_k127_4700198_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000002482 114.0
MMD1_k127_4700198_6 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000000000003871 68.0
MMD1_k127_47032_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 7.611e-318 982.0
MMD1_k127_47032_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.766e-216 700.0
MMD1_k127_47032_10 lactate metabolic process K11473,K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000377 229.0
MMD1_k127_47032_11 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000004144 216.0
MMD1_k127_47032_12 TIGRFAM molybdenum cofactor synthesis domain - - - 0.00000000000000000000000000000000000000000000000000000000003955 208.0
MMD1_k127_47032_13 PFAM NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000000000002175 204.0
MMD1_k127_47032_14 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000006721 202.0
MMD1_k127_47032_15 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000006065 198.0
MMD1_k127_47032_16 Stringent starvation protein B K09985 - - 0.0000000000000000000000000000006076 127.0
MMD1_k127_47032_18 Regulatory protein, FmdB family - - - 0.000000000000000000000008865 102.0
MMD1_k127_47032_19 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000001911 79.0
MMD1_k127_47032_2 Nitronate monooxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 548.0
MMD1_k127_47032_20 Transcriptional regulatory protein, C terminal K07775 - - 0.000000000000001518 85.0
MMD1_k127_47032_21 NosL K19342 - - 0.000000000000006292 80.0
MMD1_k127_47032_22 Glycosyl transferase family 41 - - - 0.00000000008091 70.0
MMD1_k127_47032_23 Domain of unknown function (DUF4418) - - - 0.000000004435 63.0
MMD1_k127_47032_24 Belongs to the UPF0145 family - - - 0.00000003488 55.0
MMD1_k127_47032_3 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 373.0
MMD1_k127_47032_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 341.0
MMD1_k127_47032_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 320.0
MMD1_k127_47032_6 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 307.0
MMD1_k127_47032_7 membrane-bound metal-dependent K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005618 286.0
MMD1_k127_47032_8 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002237 255.0
MMD1_k127_47032_9 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004827 254.0
MMD1_k127_4709835_0 Aminotransferase class-III K01845 - 5.4.3.8 3.155e-202 636.0
MMD1_k127_4709835_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 479.0
MMD1_k127_4709835_10 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000004557 220.0
MMD1_k127_4709835_11 Glycine zipper 2TM domain - - - 0.0000000000000000000000000000000000000002076 154.0
MMD1_k127_4709835_12 heat shock protein binding - - - 0.00000000000000000000000000000000000000768 158.0
MMD1_k127_4709835_13 YGGT family K02221 - - 0.00000000000000000000000000000000000003351 145.0
MMD1_k127_4709835_14 Transcriptional regulator - - - 0.0000000000000000000000000000000000001519 151.0
MMD1_k127_4709835_15 Conserved hypothetical protein 698 - - - 0.00000000000000000000000003346 119.0
MMD1_k127_4709835_16 PAS fold - - - 0.0000000007456 71.0
MMD1_k127_4709835_17 Histidine kinase - - - 0.0001651 54.0
MMD1_k127_4709835_2 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 471.0
MMD1_k127_4709835_3 Phosphoglucose isomerase K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 455.0
MMD1_k127_4709835_4 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 427.0
MMD1_k127_4709835_5 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 428.0
MMD1_k127_4709835_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 289.0
MMD1_k127_4709835_7 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001352 247.0
MMD1_k127_4709835_8 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000001628 236.0
MMD1_k127_4709835_9 DivIVA protein K04074 - - 0.00000000000000000000000000000000000000000000000000000000000000002362 226.0
MMD1_k127_4712293_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 546.0
MMD1_k127_4712293_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 422.0
MMD1_k127_4712293_10 - - - - 0.000000002481 65.0
MMD1_k127_4712293_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006684 370.0
MMD1_k127_4712293_3 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 325.0
MMD1_k127_4712293_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002866 269.0
MMD1_k127_4712293_5 PFAM PHP domain - - - 0.000000000000000000000000000000000000002034 155.0
MMD1_k127_4712293_6 YtxH-like protein - - - 0.00000000000000000000000000001498 121.0
MMD1_k127_4712293_7 nickel cation binding K04651,K19640 - - 0.00000000000000000000002516 104.0
MMD1_k127_4712293_8 - - - - 0.000000000000000000000411 99.0
MMD1_k127_4715468_0 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 336.0
MMD1_k127_4715468_1 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000004222 191.0
MMD1_k127_4715468_2 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000804 111.0
MMD1_k127_4734242_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 2.776e-222 694.0
MMD1_k127_4734242_1 epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 548.0
MMD1_k127_4734242_2 KOW (Kyprides, Ouzounis, Woese) motif. K05785 - - 0.000000000000000000000000000004903 123.0
MMD1_k127_4734242_3 DNA-binding transcription factor activity K18996 - - 0.0000000000000000000000137 104.0
MMD1_k127_4734242_4 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000008634 58.0
MMD1_k127_4744284_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 8.614e-269 841.0
MMD1_k127_4744284_1 Molybdopterin oxidoreductase Fe4S4 domain K00336,K05299,K22341 - 1.17.1.10,1.17.1.11,1.6.5.3 0.000000000000000000000000000000000000000000000000000002526 198.0
MMD1_k127_4744284_2 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K18330 - 1.12.1.3 0.00000000000000000000000000000000000000000000000002373 186.0
MMD1_k127_4744284_3 Ferredoxin K17992 - 1.12.1.3 0.0000000000000000000000000000000000000000001902 161.0
MMD1_k127_4759283_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007873 276.0
MMD1_k127_4759283_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000008087 210.0
MMD1_k127_4759283_2 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000489 199.0
MMD1_k127_4759283_3 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000001546 198.0
MMD1_k127_4759283_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000001513 158.0
MMD1_k127_4759283_7 MlaD protein K02067 - - 0.000000002131 61.0
MMD1_k127_4774152_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 2.876e-300 940.0
MMD1_k127_4774152_1 Elongation factor SelB, winged helix K03833 - - 5.245e-214 682.0
MMD1_k127_4774152_10 SurA N-terminal domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000718 153.0
MMD1_k127_4774152_11 - - - - 0.00000000000000000000000000009909 117.0
MMD1_k127_4774152_12 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000002033 106.0
MMD1_k127_4774152_13 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000007727 91.0
MMD1_k127_4774152_14 AsmA-like C-terminal region K07289 - - 0.0000000000000009154 91.0
MMD1_k127_4774152_15 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000009113 78.0
MMD1_k127_4774152_16 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.00000005856 57.0
MMD1_k127_4774152_17 Sigma-54 interaction domain - - - 0.000001023 60.0
MMD1_k127_4774152_19 protein involved in outer membrane biogenesis K07289 - - 0.00005452 56.0
MMD1_k127_4774152_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 520.0
MMD1_k127_4774152_3 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 504.0
MMD1_k127_4774152_4 L-seryl-tRNASec selenium transferase activity K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 464.0
MMD1_k127_4774152_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 407.0
MMD1_k127_4774152_6 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 394.0
MMD1_k127_4774152_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 338.0
MMD1_k127_4774152_8 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 331.0
MMD1_k127_4774152_9 Penicillin-binding protein 1A K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000004334 282.0
MMD1_k127_4793755_0 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 0.0 1062.0
MMD1_k127_4793755_1 cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 462.0
MMD1_k127_4793755_2 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 325.0
MMD1_k127_4793755_3 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004123 269.0
MMD1_k127_4793755_4 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K00564,K15460 - 2.1.1.172,2.1.1.223 0.000000000000000000000000000000000000000000000000000000000000000138 229.0
MMD1_k127_4793755_5 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000002605 213.0
MMD1_k127_4793755_6 PFAM lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000001392 145.0
MMD1_k127_4793755_7 PFAM response regulator receiver K02481,K07712 - - 0.0000004364 58.0
MMD1_k127_4793755_8 Domain of unknown function (DUF4124) - - - 0.0006044 48.0
MMD1_k127_4818683_0 acetyl-CoA catabolic process K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007695 518.0
MMD1_k127_4818683_1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 364.0
MMD1_k127_4888338_0 - - - - 0.000000000000000000000003559 109.0
MMD1_k127_4888338_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000222 81.0
MMD1_k127_4888338_2 Metallo-beta-lactamase superfamily - - - 0.00000000000002961 74.0
MMD1_k127_4888338_3 - - - - 0.000004923 53.0
MMD1_k127_4900514_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 563.0
MMD1_k127_4900514_1 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 300.0
MMD1_k127_4900514_2 PFAM binding-protein-dependent transport systems inner membrane component K02050,K15552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001069 280.0
MMD1_k127_4900514_3 PFAM ABC transporter related K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004487 258.0
MMD1_k127_4900514_4 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.0000000000000000000000000000000000000000000002072 176.0
MMD1_k127_4900514_5 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.000000000000000000000000000000000004855 141.0
MMD1_k127_4900514_6 Nitrate reductase gamma subunit - - - 0.000000000000000000001257 104.0
MMD1_k127_4900514_7 - - - - 0.000000000000000000005627 96.0
MMD1_k127_4901777_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.292e-279 874.0
MMD1_k127_4901777_1 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001543 277.0
MMD1_k127_4901777_2 PFAM ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001075 234.0
MMD1_k127_4973891_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 7.068e-221 691.0
MMD1_k127_4973891_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 340.0
MMD1_k127_4973891_2 COG1233 Phytoene dehydrogenase and related - - - 0.00000000000001398 76.0
MMD1_k127_4980029_0 - - - - 0.0000000000000000000000000000000000000000000000000004257 191.0
MMD1_k127_4980029_1 IMP dehydrogenase activity K06041,K11527 - 2.7.13.3,5.3.1.13 0.000000000000000000000000000000000000000000000002795 179.0
MMD1_k127_4980029_2 Protein of unknown function (DUF4019) - - - 0.0000000000000000000000000000000000000000001986 164.0
MMD1_k127_4980029_3 IMP dehydrogenase activity K06041,K11527 - 2.7.13.3,5.3.1.13 0.0000000000000000000000000000000000006837 143.0
MMD1_k127_4980029_5 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes K08321,K11645 - 2.3.1.245,4.1.2.13 0.000000001261 58.0
MMD1_k127_4984594_0 phosphorelay signal transduction system K02584,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 494.0
MMD1_k127_4984594_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 484.0
MMD1_k127_4984594_10 - - - - 0.00000000000000000000000001596 109.0
MMD1_k127_4984594_11 L,D-transpeptidase catalytic domain K16291 - - 0.0001764 46.0
MMD1_k127_4984594_2 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 469.0
MMD1_k127_4984594_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 353.0
MMD1_k127_4984594_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 293.0
MMD1_k127_4984594_5 Universal stress protein family K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000004126 244.0
MMD1_k127_4984594_6 - - - - 0.000000000000000000000000000000000000000000000002516 177.0
MMD1_k127_4984594_7 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.00000000000000000000000000000000000001169 154.0
MMD1_k127_4984594_8 UTRA K03710 - - 0.0000000000000000000000000000000008297 140.0
MMD1_k127_4984594_9 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000002254 117.0
MMD1_k127_4985885_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 526.0
MMD1_k127_4985885_1 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001656 236.0
MMD1_k127_4985885_2 Domain of unknown function (DUF4410) - - - 0.00000000000007962 77.0
MMD1_k127_4985885_3 Protein of unknown function (DUF2845) - - - 0.0000000006843 67.0
MMD1_k127_4985885_4 Tetratricopeptide repeat - - - 0.0002895 52.0
MMD1_k127_503276_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 9.464e-199 625.0
MMD1_k127_503276_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 617.0
MMD1_k127_503276_10 helix-turn-helix- domain containing protein, AraC type - - - 0.00000000000000000000000000006828 125.0
MMD1_k127_503276_11 nucleotide metabolic process - - - 0.0000000000000000000000000001146 118.0
MMD1_k127_503276_12 Mechanosensitive ion channel - - - 0.0000000000002262 81.0
MMD1_k127_503276_2 Anthranilate synthase component I K01657,K01665,K03342,K13950 - 2.6.1.85,4.1.3.27,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 436.0
MMD1_k127_503276_3 dUTP biosynthetic process K01494 GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 323.0
MMD1_k127_503276_4 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 331.0
MMD1_k127_503276_5 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000000000000000000000000000000000000004775 231.0
MMD1_k127_503276_6 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000005597 229.0
MMD1_k127_503276_7 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000002828 228.0
MMD1_k127_503276_8 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000006134 162.0
MMD1_k127_503276_9 - - - - 0.00000000000000000000000000000000000001641 157.0
MMD1_k127_5051756_0 Domain of unknown function (DUF2172) - - - 4.596e-223 697.0
MMD1_k127_5051756_1 Putative zinc binding domain - - - 4.113e-211 661.0
MMD1_k127_5051756_2 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 516.0
MMD1_k127_5051756_3 Nucleotidyl transferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 436.0
MMD1_k127_5051756_4 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 381.0
MMD1_k127_5051756_5 FAD dependent oxidoreductase K00109,K00273,K15736 - 1.1.99.2,1.4.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 328.0
MMD1_k127_5051756_6 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 309.0
MMD1_k127_5051756_7 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000002303 265.0
MMD1_k127_5051756_8 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000002725 233.0
MMD1_k127_5066830_0 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000002955 156.0
MMD1_k127_5123707_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 587.0
MMD1_k127_5123707_1 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 493.0
MMD1_k127_5123707_2 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 400.0
MMD1_k127_5123707_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 366.0
MMD1_k127_5123707_4 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 328.0
MMD1_k127_5123707_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000001666 203.0
MMD1_k127_5196724_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004281 268.0
MMD1_k127_5196724_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005311 261.0
MMD1_k127_5196724_2 histidine kinase, HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000001334 237.0
MMD1_k127_5196724_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000609 171.0
MMD1_k127_5240938_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1508.0
MMD1_k127_5240938_1 Nitrate nitrite transporter K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 542.0
MMD1_k127_5240938_11 deoxyhypusine monooxygenase activity - - - 0.0000000000003264 80.0
MMD1_k127_5240938_12 protein secretion K03116,K03117 - - 0.0000000000008216 73.0
MMD1_k127_5240938_13 Belongs to the 'phage' integrase family - - - 0.0002544 44.0
MMD1_k127_5240938_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 299.0
MMD1_k127_5240938_4 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.00000000000000000000000000000000000003088 150.0
MMD1_k127_5240938_5 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000137 133.0
MMD1_k127_5240938_6 cytochrome c - - - 0.000000000000000000000000000000006399 134.0
MMD1_k127_5240938_7 helix_turn_helix, cAMP Regulatory protein K10914,K21563 - - 0.000000000000000000000000000002866 129.0
MMD1_k127_5240938_8 bacterial (prokaryotic) histone like domain K04764 - - 0.000000000000000000000000004425 112.0
MMD1_k127_5240938_9 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000149 110.0
MMD1_k127_5260003_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 301.0
MMD1_k127_5260003_1 Signal transduction histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 302.0
MMD1_k127_5260003_10 DnaJ domain protein K05801 - - 0.00000005193 63.0
MMD1_k127_5260003_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000004118 245.0
MMD1_k127_5260003_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001034 231.0
MMD1_k127_5260003_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000001567 199.0
MMD1_k127_5260003_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000008954 128.0
MMD1_k127_5260003_6 - - - - 0.00000000000000000000000006032 111.0
MMD1_k127_5260003_8 Protein of unknown function (DUF3187) - - - 0.000000000000000000001009 107.0
MMD1_k127_5260003_9 - - - - 0.00000000004992 67.0
MMD1_k127_5261496_0 PHB de-polymerase C-terminus K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 444.0
MMD1_k127_5261496_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 315.0
MMD1_k127_5261496_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000246 140.0
MMD1_k127_5261496_3 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.00000000000000000000000001828 121.0
MMD1_k127_5276621_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 481.0
MMD1_k127_5276621_1 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 296.0
MMD1_k127_5276621_3 YMGG-like Gly-zipper - - - 0.0000001307 61.0
MMD1_k127_5299473_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 433.0
MMD1_k127_5299473_1 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 387.0
MMD1_k127_5299473_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001573 288.0
MMD1_k127_5299473_3 General secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001632 274.0
MMD1_k127_5299473_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000002069 228.0
MMD1_k127_5299473_5 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000001084 211.0
MMD1_k127_5299473_6 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000003299 175.0
MMD1_k127_5299473_7 Glycosyl transferase family 2 K12990 - - 0.0000000000000000000000000000000000333 146.0
MMD1_k127_5324730_0 PFAM peptidase U32 K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 389.0
MMD1_k127_5324730_2 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000001071 97.0
MMD1_k127_5364395_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 3.759e-197 621.0
MMD1_k127_5364395_1 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 488.0
MMD1_k127_5364395_2 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 447.0
MMD1_k127_5364395_3 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 289.0
MMD1_k127_5364395_4 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.0000000000000000000000000000000000000000000000000000008674 203.0
MMD1_k127_5364395_5 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000002616 163.0
MMD1_k127_5385617_0 Nicotinic acid phosphoribosyltransferase K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 551.0
MMD1_k127_5385617_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 471.0
MMD1_k127_5385617_2 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 - - 0.0000000000000000000000000000000000000000000000000000000000000000005491 235.0
MMD1_k127_5385617_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000001516 194.0
MMD1_k127_5385617_4 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000001004 145.0
MMD1_k127_5385617_5 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000003698 127.0
MMD1_k127_5385617_6 Drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000003406 115.0
MMD1_k127_5385617_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000002325 72.0
MMD1_k127_5423748_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1028.0
MMD1_k127_5423748_1 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 1.439e-256 812.0
MMD1_k127_5423748_10 Cysteine-rich small domain - - - 0.00000000000000004548 84.0
MMD1_k127_5423748_11 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000003546 73.0
MMD1_k127_5423748_12 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K01011 - 2.8.1.1,2.8.1.2 0.00002314 47.0
MMD1_k127_5423748_13 - - - - 0.0002794 47.0
MMD1_k127_5423748_2 Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 495.0
MMD1_k127_5423748_3 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 285.0
MMD1_k127_5423748_4 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000001054 224.0
MMD1_k127_5423748_5 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000634 209.0
MMD1_k127_5423748_6 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000001493 208.0
MMD1_k127_5423748_7 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000004645 128.0
MMD1_k127_5423748_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000006594 118.0
MMD1_k127_5423748_9 Transcriptional regulator, MerR family - - - 0.000000000000000000000122 100.0
MMD1_k127_5428503_0 PFAM Radical SAM domain protein K22227 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 600.0
MMD1_k127_5428503_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 497.0
MMD1_k127_5428503_2 Uroporphyrinogen decarboxylase (URO-D) K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000002767 108.0
MMD1_k127_5439159_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 540.0
MMD1_k127_5439333_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 544.0
MMD1_k127_5439333_1 Starch synthase catalytic domain K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 445.0
MMD1_k127_5439333_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 407.0
MMD1_k127_5439333_3 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 334.0
MMD1_k127_5439333_4 Cupredoxin-like domain K02275 - 1.9.3.1 0.000000000000000000000000000004016 123.0
MMD1_k127_5439333_5 Belongs to the ompA family K03286 - - 0.00000000000000000000000000004875 126.0
MMD1_k127_5444578_0 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 1.167e-237 743.0
MMD1_k127_5444578_1 Ribonuclease R winged-helix domain K09720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 455.0
MMD1_k127_5444578_2 TIGRFAM deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000001783 186.0
MMD1_k127_5444578_3 Involved in cell shape control K22222 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000002034 185.0
MMD1_k127_5444578_4 Domain of unknown function (DUF3821) - - - 0.000000000000000004032 87.0
MMD1_k127_5446283_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 316.0
MMD1_k127_5446283_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001249 243.0
MMD1_k127_5463797_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1173.0
MMD1_k127_5463797_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.295e-286 902.0
MMD1_k127_5463797_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000885 446.0
MMD1_k127_5463797_3 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 383.0
MMD1_k127_5463797_4 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 286.0
MMD1_k127_5463797_5 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001279 250.0
MMD1_k127_5463797_6 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000001595 165.0
MMD1_k127_5463797_7 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000007094 100.0
MMD1_k127_5463797_8 Transcriptional regulator - - - 0.0000009524 59.0
MMD1_k127_5463797_9 - - - - 0.0003267 46.0
MMD1_k127_549077_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.251e-288 899.0
MMD1_k127_549077_1 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 512.0
MMD1_k127_549077_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 465.0
MMD1_k127_549077_4 membrane transporter protein K07090 - - 0.00000000000000002031 83.0
MMD1_k127_549077_5 - - - - 0.0000000000000002907 82.0
MMD1_k127_5498915_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 3.646e-217 687.0
MMD1_k127_5498915_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
MMD1_k127_5498915_2 binding domain protein K07138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 401.0
MMD1_k127_5498915_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 343.0
MMD1_k127_5498915_4 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000003906 209.0
MMD1_k127_5498915_5 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000002701 143.0
MMD1_k127_5498915_6 PFAM Rubrerythrin - - - 0.00000000000000004834 87.0
MMD1_k127_5498915_8 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00002161 46.0
MMD1_k127_5498915_9 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0006343 43.0
MMD1_k127_5511281_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 426.0
MMD1_k127_5511281_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002422 215.0
MMD1_k127_5511281_2 Domain of unknown function (DUF4382) - - - 0.0000000000000008635 87.0
MMD1_k127_552189_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 357.0
MMD1_k127_552189_1 Mur ligase family, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 343.0
MMD1_k127_552189_2 AAA domain, putative AbiEii toxin, Type IV TA system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000372 266.0
MMD1_k127_552189_3 cobalt ion transport K02007 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004951 258.0
MMD1_k127_552189_4 SMART Signal transduction response regulator, receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000157 217.0
MMD1_k127_552189_5 Transcriptional regulator K07722 - - 0.0000000000000000000000000000000000000000000000000000001641 197.0
MMD1_k127_552189_6 PFAM Cobalt transport protein K02008 - - 0.000000000000000000000000000000001601 141.0
MMD1_k127_552189_7 cobalt ion transport K02009 - - 0.0000000000000000000000000005844 116.0
MMD1_k127_552189_8 DeoC/LacD family aldolase - - - 0.0000000000007462 70.0
MMD1_k127_552189_9 - - - - 0.0003276 44.0
MMD1_k127_5525929_0 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009608 449.0
MMD1_k127_5525929_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 357.0
MMD1_k127_5525929_2 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 363.0
MMD1_k127_5525929_4 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000002303 109.0
MMD1_k127_5525929_5 Universal stress protein family - - - 0.00000006509 60.0
MMD1_k127_5551600_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 614.0
MMD1_k127_5551600_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 533.0
MMD1_k127_5551600_10 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000005488 96.0
MMD1_k127_5551600_11 - - - - 0.0000006275 54.0
MMD1_k127_5551600_12 - - - - 0.0000008285 58.0
MMD1_k127_5551600_13 - - - - 0.00001483 47.0
MMD1_k127_5551600_14 protein histidine kinase activity K02491,K13533,K14986 - 2.7.13.3 0.00001869 55.0
MMD1_k127_5551600_2 PFAM PfkB K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 396.0
MMD1_k127_5551600_3 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 309.0
MMD1_k127_5551600_4 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007468 285.0
MMD1_k127_5551600_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000004437 245.0
MMD1_k127_5551600_6 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000001043 225.0
MMD1_k127_5551600_7 Protein tyrosine serine phosphatase - - - 0.000000000000000000000000000005699 132.0
MMD1_k127_5551600_8 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000001327 118.0
MMD1_k127_5551600_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000006385 96.0
MMD1_k127_5566610_0 PD-(D/E)XK nuclease superfamily - - - 3.256e-231 751.0
MMD1_k127_5566610_1 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 314.0
MMD1_k127_5617621_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 412.0
MMD1_k127_5617621_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 324.0
MMD1_k127_5617621_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 322.0
MMD1_k127_5617621_3 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002853 281.0
MMD1_k127_5617621_4 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002316 287.0
MMD1_k127_5617621_5 STAS domain K04749 - - 0.00000000000000000000001102 104.0
MMD1_k127_5617621_6 response regulator K07315 - 3.1.3.3 0.0000000000000008323 83.0
MMD1_k127_5617621_7 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000009176 82.0
MMD1_k127_5617621_8 PFAM Mammalian cell entry related K02067 - - 0.00000000000000123 88.0
MMD1_k127_5624186_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 329.0
MMD1_k127_5624186_1 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000004116 186.0
MMD1_k127_5624186_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000001413 180.0
MMD1_k127_5624186_3 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000003031 56.0
MMD1_k127_5625291_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 441.0
MMD1_k127_5625291_1 TIGRFAM FeS cluster assembly scaffold protein NifU K04488 - - 0.00000000000000000000000000000000000000000000000000000000265 201.0
MMD1_k127_5625291_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000007135 153.0
MMD1_k127_5625291_3 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.000000000000000000000000000000000000005703 152.0
MMD1_k127_5625291_4 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000001518 123.0
MMD1_k127_5625291_5 Sulfurtransferase TusA - - - 0.000000000000000000000000004887 113.0
MMD1_k127_5635325_0 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 419.0
MMD1_k127_5635325_1 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000003774 206.0
MMD1_k127_5635325_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.00000000000000000000000000000000000000000000000000001546 206.0
MMD1_k127_5635325_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000009336 190.0
MMD1_k127_5635325_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000003531 72.0
MMD1_k127_5648231_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000001464 267.0
MMD1_k127_5648231_1 Enoyl-(Acyl carrier protein) reductase K10780 - 1.3.1.104 0.0000000000000000000000000000000000000000000002931 177.0
MMD1_k127_5648231_2 Phosphopantetheine attachment site - - - 0.0000000000000000000002703 104.0
MMD1_k127_5648796_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 447.0
MMD1_k127_5648796_1 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008644 423.0
MMD1_k127_5648796_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000006534 198.0
MMD1_k127_5648796_3 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000002525 180.0
MMD1_k127_5648796_4 COG1335 Amidases related to nicotinamidase - - - 0.0000000000000000000000000000000000007902 147.0
MMD1_k127_5648796_5 Universal stress protein family K07090 - - 0.0000000000000000000000005947 115.0
MMD1_k127_5648796_6 Belongs to the universal stress protein A family - - - 0.0000001273 59.0
MMD1_k127_5675949_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.224e-278 870.0
MMD1_k127_5675949_1 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000002123 197.0
MMD1_k127_5675949_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000003093 165.0
MMD1_k127_5675949_3 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000005636 155.0
MMD1_k127_5708963_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 6.266e-263 822.0
MMD1_k127_5708963_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 533.0
MMD1_k127_5708963_10 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.00000000000000000000000171 103.0
MMD1_k127_5708963_11 Cytochrome C oxidase, cbb3-type, subunit III K08906 - - 0.0000000000000000000009449 98.0
MMD1_k127_5708963_12 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000575 90.0
MMD1_k127_5708963_2 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 470.0
MMD1_k127_5708963_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 438.0
MMD1_k127_5708963_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 388.0
MMD1_k127_5708963_5 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 386.0
MMD1_k127_5708963_6 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 308.0
MMD1_k127_5708963_7 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000002656 228.0
MMD1_k127_5708963_8 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000001783 167.0
MMD1_k127_5708963_9 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.000000000000000000000000000000009082 127.0
MMD1_k127_5716016_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 4.948e-310 956.0
MMD1_k127_5716016_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 606.0
MMD1_k127_5716016_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752,K13818 - 2.7.7.77 0.0000000000000000000000000000000001364 139.0
MMD1_k127_5716016_11 - - - - 0.000000000000000000000000000000001807 134.0
MMD1_k127_5716016_12 Predicted metal-binding protein (DUF2284) - - - 0.00000000000000000000009499 111.0
MMD1_k127_5716016_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000002236 92.0
MMD1_k127_5716016_14 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000004907 84.0
MMD1_k127_5716016_15 PFAM thiamineS protein - - - 0.000000000000004226 78.0
MMD1_k127_5716016_16 Redoxin - - - 0.0000000000001918 73.0
MMD1_k127_5716016_17 DNA-binding transcription factor activity K03892 - - 0.0000000000004569 73.0
MMD1_k127_5716016_18 - - - - 0.000001907 53.0
MMD1_k127_5716016_2 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 535.0
MMD1_k127_5716016_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 326.0
MMD1_k127_5716016_4 NOG31153 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002997 264.0
MMD1_k127_5716016_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000003099 223.0
MMD1_k127_5716016_6 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000002625 168.0
MMD1_k127_5716016_7 - - - - 0.000000000000000000000000000000000000000001175 162.0
MMD1_k127_5716016_8 - - - - 0.00000000000000000000000000000000000000006712 159.0
MMD1_k127_5716016_9 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000000001978 149.0
MMD1_k127_5744856_0 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 306.0
MMD1_k127_5744856_1 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000764 259.0
MMD1_k127_5744856_2 queuosine biosynthetic process K03470,K09765 - 1.17.99.6,3.1.26.4 0.000000000000000000000000000000000000000000000000000006418 195.0
MMD1_k127_5744856_3 Protein of unknown function (DUF2905) - - - 0.00000000000000000004427 91.0
MMD1_k127_5744856_4 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000001394 62.0
MMD1_k127_5778365_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.615e-226 707.0
MMD1_k127_5778365_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 9.983e-221 695.0
MMD1_k127_5778365_11 Transcriptional regulator K02529 - - 0.000000000000000174 86.0
MMD1_k127_5778365_2 AMP-binding enzyme C-terminal domain K05939 - 2.3.1.40,6.2.1.20 2.292e-208 659.0
MMD1_k127_5778365_3 inositol-3-phosphate synthase activity K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 538.0
MMD1_k127_5778365_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 457.0
MMD1_k127_5778365_5 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 383.0
MMD1_k127_5778365_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002261 284.0
MMD1_k127_5778365_7 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000007939 235.0
MMD1_k127_5778365_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000005778 187.0
MMD1_k127_5778365_9 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000006062 181.0
MMD1_k127_5781119_0 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 338.0
MMD1_k127_5781119_1 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000001856 113.0
MMD1_k127_5781119_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000003211 119.0
MMD1_k127_5781119_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000002895 71.0
MMD1_k127_5781119_4 Fimbrial assembly protein (PilN) K02663 - - 0.0000000006217 67.0
MMD1_k127_5781119_5 Pilus assembly protein, PilP K02665 - - 0.00000004035 61.0
MMD1_k127_596505_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 384.0
MMD1_k127_596505_1 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 361.0
MMD1_k127_596505_2 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000491 224.0
MMD1_k127_596505_3 ABC transporter K01989 - - 0.00000000000000000000000000000000000000001668 165.0
MMD1_k127_596505_4 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000008534 150.0
MMD1_k127_596505_5 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000001373 148.0
MMD1_k127_596505_6 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000005827 146.0
MMD1_k127_596505_7 Four helix bundle sensory module for signal transduction K03406 - - 0.0000000000002348 82.0
MMD1_k127_597559_0 phosphoglucosamine mutase activity K01835,K01840 - 5.4.2.2,5.4.2.8 1.316e-219 692.0
MMD1_k127_597559_1 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000000000000000000000000000000000000001904 235.0
MMD1_k127_597559_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000004765 161.0
MMD1_k127_597559_3 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000005044 69.0
MMD1_k127_616299_0 Telomere recombination K04656 - - 4.631e-260 825.0
MMD1_k127_616299_1 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 444.0
MMD1_k127_616299_2 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000001209 236.0
MMD1_k127_616299_3 AIR synthase related protein, N-terminal domain K04655 - - 0.00000000000000000000000000000000007266 136.0
MMD1_k127_616299_4 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000001691 51.0
MMD1_k127_621602_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 4.075e-210 659.0
MMD1_k127_621602_1 Aldehyde dehydrogenase family K22187 - - 2.432e-199 632.0
MMD1_k127_621602_10 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 377.0
MMD1_k127_621602_11 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 359.0
MMD1_k127_621602_12 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 335.0
MMD1_k127_621602_13 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 319.0
MMD1_k127_621602_14 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 308.0
MMD1_k127_621602_15 Vitamin K epoxide reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006291 243.0
MMD1_k127_621602_16 PFAM Phosphomethylpyrimidine kinase type-1 K00868,K00941,K14153 - 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000008424 235.0
MMD1_k127_621602_17 NmrA-like family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000002772 220.0
MMD1_k127_621602_18 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000001232 208.0
MMD1_k127_621602_19 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000001702 136.0
MMD1_k127_621602_2 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 575.0
MMD1_k127_621602_20 - - - - 0.00000000000001522 76.0
MMD1_k127_621602_22 Chemotaxis phosphatase CheX - - - 0.000000004155 62.0
MMD1_k127_621602_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 565.0
MMD1_k127_621602_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 510.0
MMD1_k127_621602_5 CobW/HypB/UreG, nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 489.0
MMD1_k127_621602_6 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 459.0
MMD1_k127_621602_7 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 427.0
MMD1_k127_621602_8 (2R)-phospho-3-sulfolactate synthase (ComA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 421.0
MMD1_k127_621602_9 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 408.0
MMD1_k127_63872_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.028e-202 636.0
MMD1_k127_63872_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 342.0
MMD1_k127_63872_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 309.0
MMD1_k127_63872_3 Uncharacterized conserved protein (DUF2075) K09384 - - 0.00000000000000000000000000000000000000000000000000000000000000000007037 232.0
MMD1_k127_63872_4 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.00000000000000000002879 102.0
MMD1_k127_63872_5 Sporulation and spore germination - - - 0.0000000002135 68.0
MMD1_k127_664141_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 8.421e-207 651.0
MMD1_k127_664141_1 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 554.0
MMD1_k127_664141_2 ACT domain K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 527.0
MMD1_k127_664141_3 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 452.0
MMD1_k127_664141_4 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 310.0
MMD1_k127_690785_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 611.0
MMD1_k127_690785_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 528.0
MMD1_k127_690785_10 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 307.0
MMD1_k127_690785_11 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000571 266.0
MMD1_k127_690785_12 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000000000000000007221 226.0
MMD1_k127_690785_13 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000009518 222.0
MMD1_k127_690785_14 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000005511 214.0
MMD1_k127_690785_15 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000000000000000001301 196.0
MMD1_k127_690785_16 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000002069 152.0
MMD1_k127_690785_17 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589,K06438 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0040007,GO:0042802,GO:0043093,GO:0044085,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.000000000000000000000000000000000001706 148.0
MMD1_k127_690785_18 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000335 73.0
MMD1_k127_690785_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 533.0
MMD1_k127_690785_3 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 452.0
MMD1_k127_690785_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 424.0
MMD1_k127_690785_5 Cell cycle protein K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 418.0
MMD1_k127_690785_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 395.0
MMD1_k127_690785_7 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 362.0
MMD1_k127_690785_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 359.0
MMD1_k127_690785_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 322.0
MMD1_k127_793567_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 545.0
MMD1_k127_793567_1 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 314.0
MMD1_k127_793567_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 308.0
MMD1_k127_793567_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000004689 213.0
MMD1_k127_793567_4 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.00000000000000000000000000000000000000000000001995 181.0
MMD1_k127_793567_5 - - - - 0.000000000000000000000000001068 113.0
MMD1_k127_800904_0 Metalloenzyme superfamily K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 443.0
MMD1_k127_800904_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 384.0
MMD1_k127_803449_0 CoA-binding domain K00996 - 2.7.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 466.0
MMD1_k127_803449_1 type II secretion system protein E K02454 - - 0.000000000000000000000000000000000000578 145.0
MMD1_k127_824003_0 Belongs to the glycosyl hydrolase 57 family - - - 7.515e-198 636.0
MMD1_k127_824003_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 374.0
MMD1_k127_824003_11 COG3156 Type II secretory pathway, component PulK K02460 - - 0.000000749 60.0
MMD1_k127_824003_2 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000001334 205.0
MMD1_k127_824003_3 nuclease K00590,K01174 GO:0003674,GO:0003824,GO:0004518,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575 2.1.1.113,3.1.31.1 0.00000000000000000000000000000000000000000002385 167.0
MMD1_k127_824003_4 ethanolamine kinase activity K07251 - 2.7.1.89 0.000000000000000000000000000000000005763 150.0
MMD1_k127_824003_5 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.0000000000000000000000000000545 125.0
MMD1_k127_824003_6 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000000000000009852 92.0
MMD1_k127_824003_7 ABC-type multidrug transport system ATPase and permease K06147 - - 0.0000000000000001616 86.0
MMD1_k127_824003_9 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000002044 66.0
MMD1_k127_836140_0 Peptidase M16 domain protein K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 332.0
MMD1_k127_836140_1 Ribosomal RNA adenine dimethylase - - - 0.0000000001032 70.0
MMD1_k127_848421_0 PD-(D/E)XK nuclease superfamily - - - 2.491e-245 792.0
MMD1_k127_848421_1 Belongs to the helicase family. UvrD subfamily - - - 3.963e-213 694.0
MMD1_k127_848421_2 - - - - 0.00000001594 68.0
MMD1_k127_848421_3 PFAM transposase IS116 IS110 IS902 family protein - - - 0.0000004949 53.0
MMD1_k127_871114_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1036.0
MMD1_k127_871114_1 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 589.0
MMD1_k127_871114_11 - - - - 0.000002471 56.0
MMD1_k127_871114_2 PFAM type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 505.0
MMD1_k127_871114_3 Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 494.0
MMD1_k127_871114_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 355.0
MMD1_k127_871114_5 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000003908 211.0
MMD1_k127_871114_6 Gram-negative-bacterium-type cell outer membrane assembly K04064,K06186 GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0050896 - 0.000000000000000000000004051 106.0
MMD1_k127_871114_7 response regulator, receiver K00384,K02658,K07814,K11527 - 1.8.1.9,2.7.13.3 0.000000000000008188 83.0
MMD1_k127_871114_8 regulation of DNA repair K03565 - - 0.000000000000009765 80.0
MMD1_k127_87149_0 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 341.0
MMD1_k127_87149_1 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000002488 156.0
MMD1_k127_87149_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein K07636 - 2.7.13.3 0.0000000001383 72.0
MMD1_k127_87149_3 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.0000001267 58.0
MMD1_k127_876434_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 1.21e-205 649.0
MMD1_k127_876434_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 391.0
MMD1_k127_876434_10 Glycosyl transferase, family 2 - - - 0.000000389 53.0
MMD1_k127_876434_11 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000006466 52.0
MMD1_k127_876434_12 PFAM glycosyl transferase family 2 - - - 0.000001164 53.0
MMD1_k127_876434_13 Flagellar hook protein flgE - - - 0.000001235 51.0
MMD1_k127_876434_2 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003615 289.0
MMD1_k127_876434_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001521 257.0
MMD1_k127_876434_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000002711 185.0
MMD1_k127_876434_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000001399 178.0
MMD1_k127_876434_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000216 166.0
MMD1_k127_876434_7 Tetratricopeptide repeat - - - 0.00000000000000000000005601 110.0
MMD1_k127_876434_8 Roadblock/LC7 domain - - - 0.00000000000000000003596 94.0
MMD1_k127_876434_9 PFAM response regulator receiver K03413 - - 0.0000000000000001921 88.0
MMD1_k127_912919_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 412.0
MMD1_k127_912919_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 293.0
MMD1_k127_912919_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001041 255.0
MMD1_k127_913286_0 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 525.0
MMD1_k127_913286_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 306.0
MMD1_k127_913286_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003095 283.0
MMD1_k127_913286_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000003204 135.0
MMD1_k127_913286_4 ferric iron binding K02380 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008199,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0051604,GO:0055114,GO:0071704,GO:1901564 - 0.0000000000000000000000000000113 127.0
MMD1_k127_914485_0 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 551.0
MMD1_k127_914485_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 439.0
MMD1_k127_914485_10 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000004532 151.0
MMD1_k127_914485_11 PAS domain containing protein K03406,K13924,K14986 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000005591 99.0
MMD1_k127_914485_13 - - - - 0.00000000000000003969 86.0
MMD1_k127_914485_14 Glutaredoxin K03676 - - 0.0000000000001241 71.0
MMD1_k127_914485_2 phosphorelay signal transduction system K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 402.0
MMD1_k127_914485_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 388.0
MMD1_k127_914485_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 369.0
MMD1_k127_914485_5 Belongs to the acetyltransferase family. ArgA subfamily K00619,K14681 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000003103 227.0
MMD1_k127_914485_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000118 219.0
MMD1_k127_914485_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000004067 201.0
MMD1_k127_914485_8 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000002 151.0
MMD1_k127_914485_9 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000000000000000003867 151.0
MMD1_k127_945569_0 Extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 564.0
MMD1_k127_945569_1 isochorismatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 469.0
MMD1_k127_945569_10 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000000004931 141.0
MMD1_k127_945569_11 PFAM peptidase K08303 - - 0.0000000000000000007296 87.0
MMD1_k127_945569_2 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 461.0
MMD1_k127_945569_3 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 421.0
MMD1_k127_945569_4 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 352.0
MMD1_k127_945569_5 ABC transporter permease K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 348.0
MMD1_k127_945569_6 metalloendopeptidase activity K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002535 261.0
MMD1_k127_945569_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000002861 203.0
MMD1_k127_945569_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000001148 199.0
MMD1_k127_945569_9 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000006925 158.0
MMD1_k127_951860_0 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 368.0
MMD1_k127_951860_1 AMP binding - - - 0.000000000000000000000000000000000000000001526 168.0
MMD1_k127_951860_2 - - - - 0.00000000000000001749 86.0
MMD1_k127_951860_3 Thiamine-binding protein - - - 0.00000000001261 65.0
MMD1_k127_951860_4 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.0003855 43.0
MMD1_k127_952617_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 581.0
MMD1_k127_952617_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 466.0
MMD1_k127_952617_10 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000006093 110.0
MMD1_k127_952617_11 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000363 106.0
MMD1_k127_952617_12 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000008842 104.0
MMD1_k127_952617_13 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.000000000000000000002437 97.0
MMD1_k127_952617_14 PFAM DsrE family protein K07235 - - 0.0000000009168 66.0
MMD1_k127_952617_16 Tetratricopeptide repeat protein - - - 0.000001111 59.0
MMD1_k127_952617_17 sulfur relay protein TusB DsrH K07237 - - 0.0001663 48.0
MMD1_k127_952617_18 PFAM DsrE K07235 - - 0.0002881 46.0
MMD1_k127_952617_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 461.0
MMD1_k127_952617_3 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 393.0
MMD1_k127_952617_4 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 384.0
MMD1_k127_952617_5 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 308.0
MMD1_k127_952617_6 zinc ion binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003045 253.0
MMD1_k127_952617_7 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000056 199.0
MMD1_k127_952617_8 DNA topoisomerase type I activity K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000204 157.0
MMD1_k127_952617_9 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000003844 129.0
MMD1_k127_953549_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1037.0
MMD1_k127_953549_1 K transport systems K10716 - - 0.000000000000000000000000000000000000000000002279 169.0
MMD1_k127_953549_2 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000008915 141.0
MMD1_k127_966656_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 4.921e-305 943.0
MMD1_k127_966656_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.183e-246 772.0
MMD1_k127_966656_10 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004061 249.0
MMD1_k127_966656_11 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000006536 199.0
MMD1_k127_966656_12 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000001677 190.0
MMD1_k127_966656_13 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000001312 178.0
MMD1_k127_966656_14 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000001052 169.0
MMD1_k127_966656_15 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000003008 166.0
MMD1_k127_966656_16 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K07112 - - 0.0000000000000000000000000000000000005285 149.0
MMD1_k127_966656_17 Sulphur transport - - - 0.000000000000000000000000000000000009045 141.0
MMD1_k127_966656_18 - - - - 0.00000000000000000000002722 104.0
MMD1_k127_966656_19 Sulfurtransferase TusA - - - 0.00000000000000000000005004 100.0
MMD1_k127_966656_2 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 499.0
MMD1_k127_966656_20 TPR repeat - - - 0.000001472 61.0
MMD1_k127_966656_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 436.0
MMD1_k127_966656_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 392.0
MMD1_k127_966656_5 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 369.0
MMD1_k127_966656_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 364.0
MMD1_k127_966656_7 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 355.0
MMD1_k127_966656_8 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 299.0
MMD1_k127_966656_9 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000001836 260.0
MMD1_k127_981972_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 3.493e-198 623.0
MMD1_k127_981972_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004309 608.0
MMD1_k127_981972_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 491.0
MMD1_k127_981972_3 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 337.0
MMD1_k127_98882_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 451.0
MMD1_k127_98882_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 361.0
MMD1_k127_98882_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 338.0
MMD1_k127_98882_3 PFAM cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 305.0
MMD1_k127_98882_4 Mo-molybdopterin cofactor metabolic process K03753,K07588 - - 0.0000000000000000000000000000000000000008737 156.0