logo

Overview

ID MAG02349
Name MMD1_bin.30
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class BSN033
Order BSN033
Family UBA1163
Genus UBA1163
Species
Assembly information
Completeness (%) 70.71
Contamination (%) 2.03
GC content (%) 45.0
N50 (bp) 14,083
Genome size (bp) 2,455,330

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2291

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1019057_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 7.455e-234 736.0
MMD1_k127_1019057_1 AAA domain K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 436.0
MMD1_k127_1019057_2 PFAM Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 400.0
MMD1_k127_1019057_3 Sir2 family K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005191 268.0
MMD1_k127_1019057_4 PFAM Nitroreductase - - - 0.0000000000000000000000000000000009645 137.0
MMD1_k127_1019057_5 rubredoxin - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0017144,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114,GO:0072592 - 0.0000000000000000001121 94.0
MMD1_k127_1019057_6 PFAM Nitroreductase - - - 0.00000000000000004404 83.0
MMD1_k127_1019057_7 Mut7-C ubiquitin - - - 0.000000002826 63.0
MMD1_k127_1019057_8 Metal-dependent phosphohydrolase K07037 - - 0.0000001662 60.0
MMD1_k127_106090_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.471e-301 936.0
MMD1_k127_106090_1 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 2.63e-287 890.0
MMD1_k127_106090_10 PFAM CBS domain K04767 - - 0.000000000000000000000000000000000000000000000000001019 190.0
MMD1_k127_106090_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000003073 162.0
MMD1_k127_106090_12 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000007453 157.0
MMD1_k127_106090_13 Y_Y_Y domain - - - 0.000000000000000000000006147 114.0
MMD1_k127_106090_14 - - - - 0.000000000000000000003555 106.0
MMD1_k127_106090_15 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.0001385 46.0
MMD1_k127_106090_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 582.0
MMD1_k127_106090_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 555.0
MMD1_k127_106090_4 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 497.0
MMD1_k127_106090_5 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 365.0
MMD1_k127_106090_6 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 309.0
MMD1_k127_106090_7 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001542 250.0
MMD1_k127_106090_8 ATP-grasp domain K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000001801 240.0
MMD1_k127_106090_9 CoA binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001086 226.0
MMD1_k127_1074356_0 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 548.0
MMD1_k127_1074356_1 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 486.0
MMD1_k127_1074356_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 302.0
MMD1_k127_1074356_3 histidine kinase, HAMP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004973 288.0
MMD1_k127_1074356_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000001188 219.0
MMD1_k127_1074356_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000001618 232.0
MMD1_k127_1074356_6 Pfam:N_methyl_2 - - - 0.00000000000001511 83.0
MMD1_k127_1074356_7 type IV pilus modification protein PilV K02458,K02671 - - 0.0000000003749 65.0
MMD1_k127_1110439_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0050897,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 442.0
MMD1_k127_1110439_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 310.0
MMD1_k127_1110439_2 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000007693 181.0
MMD1_k127_1110439_3 Peptidase family M50 K11749 - - 0.0000000000000000000000000000007303 124.0
MMD1_k127_1110439_4 4Fe-4S binding domain - - - 0.00000000000000002815 83.0
MMD1_k127_117592_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 413.0
MMD1_k127_117592_1 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 328.0
MMD1_k127_117592_2 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000003968 231.0
MMD1_k127_117592_3 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000006685 148.0
MMD1_k127_117592_4 - - - - 0.000001046 54.0
MMD1_k127_1218148_0 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 336.0
MMD1_k127_1218148_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 325.0
MMD1_k127_1218148_2 - - - - 0.00000000000000000000000000000000000000000000000000000003056 207.0
MMD1_k127_1218148_3 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000003927 169.0
MMD1_k127_1218148_4 PFAM 4Fe-4S ferredoxin - - - 0.000000001412 61.0
MMD1_k127_1222607_0 CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 453.0
MMD1_k127_1222607_1 Pfam Response regulator receiver - - - 0.00000000000000000000001902 104.0
MMD1_k127_1222607_2 binding domain protein - - - 0.000000000001772 68.0
MMD1_k127_128567_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 346.0
MMD1_k127_128567_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 310.0
MMD1_k127_128567_2 Psort location Cytoplasmic, score 9.98 K04069,K20037 - 1.97.1.4 0.00000000006654 66.0
MMD1_k127_128567_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000009335 58.0
MMD1_k127_1325360_0 3-beta hydroxysteroid dehydrogenase/isomerase family K10011,K12449 - 1.1.1.305,2.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 479.0
MMD1_k127_1325360_1 glycosyl transferase family 39 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 313.0
MMD1_k127_1325360_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604,K10011 - 1.1.1.305,2.1.2.13,2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 298.0
MMD1_k127_1325360_3 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000002827 265.0
MMD1_k127_1325360_4 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000133 231.0
MMD1_k127_1325360_5 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000006795 211.0
MMD1_k127_1325360_6 serine threonine protein kinase - - - 0.00000000000000000000009537 105.0
MMD1_k127_1325360_7 Phospholipid methyltransferase - - - 0.0000000000000000002199 95.0
MMD1_k127_1361679_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 1.734e-230 743.0
MMD1_k127_1361679_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.613e-223 712.0
MMD1_k127_1361679_10 NMT1-like family K02051,K15553 - - 0.00000000000000000000000000000000001041 148.0
MMD1_k127_1361679_11 NMT1-like family K02051,K15553 - - 0.0000000000000000000000000000001569 135.0
MMD1_k127_1361679_12 AraC-like ligand binding domain - - - 0.000000000000000000000000003458 115.0
MMD1_k127_1361679_13 Yip1 domain - - - 0.00000000000000000000000008443 120.0
MMD1_k127_1361679_14 Polysulphide reductase, NrfD - - - 0.000000000001072 79.0
MMD1_k127_1361679_15 Cell wall-active antibiotics response 4TMS YvqF K11622 - - 0.000002597 53.0
MMD1_k127_1361679_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 360.0
MMD1_k127_1361679_3 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 353.0
MMD1_k127_1361679_4 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 340.0
MMD1_k127_1361679_5 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 321.0
MMD1_k127_1361679_6 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005036 278.0
MMD1_k127_1361679_7 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000175 231.0
MMD1_k127_1361679_8 4Fe-4S dicluster domain K08358 - - 0.00000000000000000000000000000000000000000000000000000000000001025 222.0
MMD1_k127_1361679_9 sAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000000000000000003681 194.0
MMD1_k127_1366488_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 467.0
MMD1_k127_1366488_1 Rubrerythrin - - - 0.000000000000000000000000001513 117.0
MMD1_k127_1366488_2 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000007796 98.0
MMD1_k127_1425128_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000006451 204.0
MMD1_k127_1425128_1 - - - - 0.000000000000000000000000000000000000000000000000000000004085 205.0
MMD1_k127_1425128_2 - - - - 0.000000000000000000000009021 104.0
MMD1_k127_1425128_3 Methylamine utilisation protein MauE - - - 0.000000000001611 74.0
MMD1_k127_1425128_4 - - - - 0.0000008603 53.0
MMD1_k127_1425128_5 TIGRFAM C_GCAxxG_C_C family - - - 0.00003487 47.0
MMD1_k127_1425128_6 general stress protein - - - 0.00006222 50.0
MMD1_k127_143609_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1214.0
MMD1_k127_143609_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 389.0
MMD1_k127_143609_10 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000002949 148.0
MMD1_k127_143609_11 Protein containing tetrapyrrole methyltransferase domain and MazG-like K02428,K02499 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66 0.00000000000000000000000000000000006566 138.0
MMD1_k127_143609_12 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000007668 58.0
MMD1_k127_143609_2 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 356.0
MMD1_k127_143609_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 325.0
MMD1_k127_143609_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 322.0
MMD1_k127_143609_5 Protein of unknown function DUF116 K09729 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 310.0
MMD1_k127_143609_6 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006173 285.0
MMD1_k127_143609_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003745 259.0
MMD1_k127_143609_8 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005039 246.0
MMD1_k127_143609_9 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000002928 178.0
MMD1_k127_1438791_0 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 594.0
MMD1_k127_1438791_1 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 443.0
MMD1_k127_1438791_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 319.0
MMD1_k127_1438791_3 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 285.0
MMD1_k127_1438791_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000001758 228.0
MMD1_k127_1438791_5 PFAM cytochrome c oxidase, subunit III - - - 0.0000000000000000000000000000000000004406 142.0
MMD1_k127_1438791_6 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000001094 128.0
MMD1_k127_1438791_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000196 104.0
MMD1_k127_1438791_8 oxidase, subunit IV K02277 - 1.9.3.1 0.0000000000001209 74.0
MMD1_k127_1438791_9 PAC2 family - - - 0.00000000002333 70.0
MMD1_k127_143887_0 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 5.101e-197 622.0
MMD1_k127_143887_1 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 463.0
MMD1_k127_143887_2 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 378.0
MMD1_k127_143887_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 359.0
MMD1_k127_143887_4 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000098 250.0
MMD1_k127_143887_5 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000001721 201.0
MMD1_k127_143887_6 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000007732 174.0
MMD1_k127_1447234_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 2.612e-216 685.0
MMD1_k127_1447234_1 two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000003717 201.0
MMD1_k127_1447234_3 Putative regulatory protein - - - 0.000003815 50.0
MMD1_k127_1466159_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 610.0
MMD1_k127_1466159_1 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 540.0
MMD1_k127_1466159_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000001014 110.0
MMD1_k127_1466159_11 - - - - 0.000000000000003624 85.0
MMD1_k127_1466159_12 - - - - 0.0000009782 58.0
MMD1_k127_1466159_2 peptidase m48, ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001092 253.0
MMD1_k127_1466159_3 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000004396 214.0
MMD1_k127_1466159_4 S-acyltransferase activity K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000006177 196.0
MMD1_k127_1466159_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000009117 180.0
MMD1_k127_1466159_6 - - - - 0.00000000000000000000000000000000000000004243 161.0
MMD1_k127_1466159_7 TPR Domain containing protein - - - 0.0000000000000000000000000000000000000001856 165.0
MMD1_k127_1466159_8 - - - - 0.000000000000000000000000003115 119.0
MMD1_k127_1466159_9 - - - - 0.00000000000000000000001242 108.0
MMD1_k127_1466244_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 511.0
MMD1_k127_1466244_1 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 321.0
MMD1_k127_1466244_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000221 284.0
MMD1_k127_1466244_3 Fe-S-cluster-containing hydrogenase K08358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004078 263.0
MMD1_k127_1466244_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001012 248.0
MMD1_k127_1466244_5 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000007367 211.0
MMD1_k127_1466244_6 PFAM GAF domain - - - 0.0000000000000000000000000000000000000000000005692 171.0
MMD1_k127_1466244_7 AhpC/TSA family - - - 0.00000000000000000000000000000000006039 138.0
MMD1_k127_1466244_8 Transcriptional regulatory protein, C terminal K07668,K07775 - - 0.000000000000000001358 90.0
MMD1_k127_1466244_9 Class III cytochrome C family - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000001691 70.0
MMD1_k127_1472088_0 NAD(P)H dehydrogenase (quinone) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 541.0
MMD1_k127_1472088_1 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 319.0
MMD1_k127_1472088_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001786 264.0
MMD1_k127_1472088_3 Efflux pump membrane transporter K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002554 244.0
MMD1_k127_1472088_4 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000006411 199.0
MMD1_k127_1472088_5 B3/4 domain - - - 0.000000000006684 73.0
MMD1_k127_1493069_0 (ABC) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 507.0
MMD1_k127_1493069_1 PAC2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 367.0
MMD1_k127_1498273_0 Cytochrome c - - - 5.328e-256 792.0
MMD1_k127_1498273_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.506e-220 705.0
MMD1_k127_1498273_2 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000006828 251.0
MMD1_k127_1498273_3 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000001137 215.0
MMD1_k127_1498273_4 overlaps another CDS with the same product name K07112 - - 0.000000000000000000000000000000000000000000005651 166.0
MMD1_k127_1498273_5 oxidoreductase activity K00337,K03333,K04771,K07114 - 1.1.3.6,1.6.5.3,3.4.21.107 0.0000000000000000000000000000000000000000003131 166.0
MMD1_k127_1498273_6 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000003902 145.0
MMD1_k127_1498273_7 Sulphur transport K07112 - - 0.0000000000001066 70.0
MMD1_k127_1522603_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008296 294.0
MMD1_k127_1522603_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000144 283.0
MMD1_k127_1522603_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006283 275.0
MMD1_k127_1522603_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000001713 213.0
MMD1_k127_1522603_4 sequence-specific DNA binding K18830 - - 0.00000000000000000000000000000000000000000004904 163.0
MMD1_k127_1522603_5 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000009819 153.0
MMD1_k127_1522603_6 Serine hydrolase involved in the detoxification of formaldehyde K03930,K17076 - - 0.0000000205 66.0
MMD1_k127_1522603_8 - - - - 0.00000006473 55.0
MMD1_k127_1582084_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 526.0
MMD1_k127_1582084_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 408.0
MMD1_k127_1582084_2 Aspartate carbamoyltransferase K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 349.0
MMD1_k127_1582084_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000002041 185.0
MMD1_k127_1582084_4 Orotidine 5''-phosphate decarboxylase K01591,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000002597 140.0
MMD1_k127_1582084_5 Conserved carboxylase domain K01960 - 6.4.1.1 0.000000001428 59.0
MMD1_k127_1582084_7 chaperone-mediated protein folding K08309,K19804 - - 0.000005096 55.0
MMD1_k127_159894_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 331.0
MMD1_k127_159894_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000003114 244.0
MMD1_k127_159894_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000008269 194.0
MMD1_k127_159894_3 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000002532 189.0
MMD1_k127_159894_4 ABC transporter K18890 - - 0.0001416 44.0
MMD1_k127_1602786_0 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 550.0
MMD1_k127_1602786_1 May be involved in recombinational repair of damaged DNA K03631,K13582 GO:0000724,GO:0000725,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009295,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 442.0
MMD1_k127_1602786_10 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 302.0
MMD1_k127_1602786_11 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 312.0
MMD1_k127_1602786_12 Nucleotidyl transferase K00966,K21210 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000001742 263.0
MMD1_k127_1602786_13 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002685 275.0
MMD1_k127_1602786_14 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000147 264.0
MMD1_k127_1602786_15 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000003661 237.0
MMD1_k127_1602786_16 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000615 216.0
MMD1_k127_1602786_17 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000003767 208.0
MMD1_k127_1602786_18 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000004669 202.0
MMD1_k127_1602786_19 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666,K01897,K12507 - 6.2.1.3 0.0000000000000000000000000000000000000000001046 167.0
MMD1_k127_1602786_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 426.0
MMD1_k127_1602786_20 curli production assembly transport component CsgG - - - 0.000000000000000000000000000000000000000005818 169.0
MMD1_k127_1602786_21 Peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000004572 147.0
MMD1_k127_1602786_22 lysyltransferase activity K07027,K20468 - - 0.000000000000000000000000000000001673 142.0
MMD1_k127_1602786_23 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000001419 113.0
MMD1_k127_1602786_24 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000001239 115.0
MMD1_k127_1602786_25 23S rRNA-intervening sequence protein - - - 0.000000000000000000000009563 104.0
MMD1_k127_1602786_26 Glycine cleavage H-protein - - - 0.000000000000000000000009618 102.0
MMD1_k127_1602786_27 Tetratricopeptide repeat - - - 0.0000000000000000000002476 106.0
MMD1_k127_1602786_28 Protein involved in cellulose biosynthesis - - - 0.000000000003105 78.0
MMD1_k127_1602786_29 ubiE/COQ5 methyltransferase family - - - 0.000000000005515 75.0
MMD1_k127_1602786_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 416.0
MMD1_k127_1602786_30 - - - - 0.000002012 61.0
MMD1_k127_1602786_4 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 417.0
MMD1_k127_1602786_5 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 396.0
MMD1_k127_1602786_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 364.0
MMD1_k127_1602786_7 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 334.0
MMD1_k127_1602786_8 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 319.0
MMD1_k127_1602786_9 ThiS-like ubiquitin K03148 - 2.7.7.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 319.0
MMD1_k127_164158_0 TRL-like protein family - - - 0.00000000000000000001275 94.0
MMD1_k127_164158_1 - - - - 0.00000000000001791 86.0
MMD1_k127_164419_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 528.0
MMD1_k127_164419_1 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 429.0
MMD1_k127_164419_10 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000006477 169.0
MMD1_k127_164419_11 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000002067 147.0
MMD1_k127_164419_12 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000008089 142.0
MMD1_k127_164419_13 - - - - 0.0000000000000000000000000005115 122.0
MMD1_k127_164419_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 394.0
MMD1_k127_164419_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808 394.0
MMD1_k127_164419_4 Belongs to the KdsA family K01627 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008676,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016765,GO:0019294,GO:0019752,GO:0022607,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 317.0
MMD1_k127_164419_5 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 294.0
MMD1_k127_164419_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001878 276.0
MMD1_k127_164419_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000007804 251.0
MMD1_k127_164419_8 Catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000008462 238.0
MMD1_k127_164419_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000431 229.0
MMD1_k127_1651301_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 543.0
MMD1_k127_1651301_1 Biotin-protein ligase, N terminal - - - 0.00000000000000000000000000000000000000000000000004799 183.0
MMD1_k127_1651301_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000005372 166.0
MMD1_k127_1651301_3 - - - - 0.000000000000000001343 87.0
MMD1_k127_1651301_4 Hydrogenase expression formation protein (HypE) K04655 - - 0.00000000001644 67.0
MMD1_k127_1652891_0 Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K07806 - 2.6.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 350.0
MMD1_k127_1652891_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 316.0
MMD1_k127_1652891_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 304.0
MMD1_k127_1652891_3 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 298.0
MMD1_k127_1652891_4 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004841 284.0
MMD1_k127_1652891_5 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000003196 158.0
MMD1_k127_1652891_6 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000000000000000009829 107.0
MMD1_k127_1652891_7 EamA-like transporter family - - - 0.00000000000000009543 85.0
MMD1_k127_1652891_8 Methyltransferase domain - - - 0.00000000001749 73.0
MMD1_k127_1711707_0 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000813 244.0
MMD1_k127_1711707_1 Thioredoxin-like - - - 0.000000001835 61.0
MMD1_k127_1731237_0 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 1.596e-287 907.0
MMD1_k127_1731237_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 7.389e-260 818.0
MMD1_k127_1731237_10 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000001353 216.0
MMD1_k127_1731237_11 Protein similar to CwfJ C-terminus 1 K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000005515 194.0
MMD1_k127_1731237_12 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000006889 184.0
MMD1_k127_1731237_13 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000006407 156.0
MMD1_k127_1731237_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000001494 132.0
MMD1_k127_1731237_15 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000006359 125.0
MMD1_k127_1731237_16 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000001425 109.0
MMD1_k127_1731237_18 Protein of unknown function (DUF448) K07742 - - 0.0000000002838 66.0
MMD1_k127_1731237_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.642e-253 808.0
MMD1_k127_1731237_3 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 481.0
MMD1_k127_1731237_4 PFAM peptidase M16 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 456.0
MMD1_k127_1731237_5 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001325 286.0
MMD1_k127_1731237_6 Tyrosine recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000399 261.0
MMD1_k127_1731237_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000143 251.0
MMD1_k127_1731237_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000005195 252.0
MMD1_k127_1731237_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000005124 222.0
MMD1_k127_1745163_0 Peptidase family M54 K06974 - - 0.00000000000000000000000000000000000000000000004418 180.0
MMD1_k127_1745163_1 COG1363 Cellulase M and related proteins - - - 0.00000000000000000000000000000000000000009575 153.0
MMD1_k127_1745163_2 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000001697 118.0
MMD1_k127_1745163_3 mRNA binding - - - 0.0000000000000000000000000004044 115.0
MMD1_k127_1746104_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 547.0
MMD1_k127_1746104_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 443.0
MMD1_k127_1746104_2 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 367.0
MMD1_k127_1746104_3 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 299.0
MMD1_k127_1746104_4 pfam nlp p60 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005923 258.0
MMD1_k127_1746104_5 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000005379 192.0
MMD1_k127_1759745_0 Family membership - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 615.0
MMD1_k127_176129_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 389.0
MMD1_k127_176129_1 PFAM ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 317.0
MMD1_k127_176129_2 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.000000000000000000000000000001251 125.0
MMD1_k127_176129_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000003884 52.0
MMD1_k127_176129_4 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.00003126 50.0
MMD1_k127_1800444_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 576.0
MMD1_k127_1800444_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 552.0
MMD1_k127_1800444_10 Fibronectin type 3 domain - - - 0.000000000000000000000000000000003187 142.0
MMD1_k127_1800444_11 - - - - 0.0000000000000000000009729 105.0
MMD1_k127_1800444_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 449.0
MMD1_k127_1800444_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 333.0
MMD1_k127_1800444_4 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 317.0
MMD1_k127_1800444_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 313.0
MMD1_k127_1800444_6 lytic transglycosylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 306.0
MMD1_k127_1800444_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002147 251.0
MMD1_k127_1800444_8 TIGRFAM maf protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000007771 207.0
MMD1_k127_1800444_9 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000004119 175.0
MMD1_k127_18562_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 471.0
MMD1_k127_18562_1 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 340.0
MMD1_k127_18562_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000002583 236.0
MMD1_k127_18562_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000001257 205.0
MMD1_k127_18562_4 Transcriptional regulator, CarD family K07736 - - 0.000000000000000000000000000000000000000000000000000000629 197.0
MMD1_k127_18562_5 curli production assembly transport component CsgG - - - 0.000000000000000000000000000000003925 142.0
MMD1_k127_18562_6 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000004591 93.0
MMD1_k127_1893817_0 Psort location CytoplasmicMembrane, score K07793 - - 6.12e-197 625.0
MMD1_k127_1893817_1 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 388.0
MMD1_k127_1893817_2 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007978 269.0
MMD1_k127_1893817_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000001851 252.0
MMD1_k127_1893817_4 Inosine-uridine preferring nucleoside hydrolase K01239,K01250 - 3.2.2.1 0.00000000000000000000000000000000000000000000000000000000000000000003678 242.0
MMD1_k127_1893817_5 Putative TM nitroreductase - - - 0.000000000000000000000000000000000235 137.0
MMD1_k127_1895826_0 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 371.0
MMD1_k127_1895826_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 374.0
MMD1_k127_1895826_10 - - - - 0.000000003667 59.0
MMD1_k127_1895826_11 Tetratricopeptide repeat - - - 0.00001542 50.0
MMD1_k127_1895826_12 ammonia-lyase activity K01745 - 4.3.1.3 0.0000344 48.0
MMD1_k127_1895826_14 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000395 46.0
MMD1_k127_1895826_2 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 350.0
MMD1_k127_1895826_3 peptidyl-tyrosine sulfation K03217,K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 358.0
MMD1_k127_1895826_4 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 349.0
MMD1_k127_1895826_5 ABC transporter related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 334.0
MMD1_k127_1895826_6 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008522 312.0
MMD1_k127_1895826_7 cyclohydrolase K01746 - 4.3.1.4 0.000000000000000000000000006233 117.0
MMD1_k127_1895826_8 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000001581 111.0
MMD1_k127_1895826_9 PLD-like domain K17717 - 3.1.4.4 0.00000000000000001167 90.0
MMD1_k127_1923827_0 conserved protein (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 446.0
MMD1_k127_1923827_1 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 445.0
MMD1_k127_1923827_2 proline dipeptidase activity K18829 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 411.0
MMD1_k127_1923827_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 354.0
MMD1_k127_1923827_4 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 343.0
MMD1_k127_1923827_5 carbohydrate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 327.0
MMD1_k127_1923827_6 Glucose dehydrogenase C-terminus K00008,K00060 - 1.1.1.103,1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 317.0
MMD1_k127_1923827_7 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000004976 240.0
MMD1_k127_1923827_8 Calcineurin-like phosphoesterase superfamily domain K07096 - - 0.00000000000000000000000000000000000000000000000004036 189.0
MMD1_k127_1923827_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000005991 66.0
MMD1_k127_1972936_0 heme-copper terminal oxidase activity K02274 - 1.9.3.1 1.078e-213 674.0
MMD1_k127_1972936_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 8.031e-202 644.0
MMD1_k127_1972936_2 SPFH Band 7 PHB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 405.0
MMD1_k127_1972936_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001016 269.0
MMD1_k127_1972936_4 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008558 254.0
MMD1_k127_1972936_5 - - - - 0.0000000000000000000000000002591 120.0
MMD1_k127_1972936_6 sterol carrier protein - - - 0.00000000000000000000000002271 111.0
MMD1_k127_1972936_7 PhoQ Sensor - - - 0.00001427 56.0
MMD1_k127_1972936_8 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.00002086 53.0
MMD1_k127_1972936_9 PilZ domain - - - 0.00006976 50.0
MMD1_k127_1981784_0 Domain of Unknown Function (DUF748) - - - 2.536e-213 686.0
MMD1_k127_1981784_1 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001462 279.0
MMD1_k127_1981784_2 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000224 223.0
MMD1_k127_1981784_3 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000001903 203.0
MMD1_k127_20050_0 Lytic transglycosylase, SLT, LysM and LysM domain-containing K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 364.0
MMD1_k127_20050_1 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003936 269.0
MMD1_k127_20050_10 Polymer-forming cytoskeletal - - - 0.000000000000000003832 90.0
MMD1_k127_20050_11 - - - - 0.0000000000000006905 92.0
MMD1_k127_20050_2 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001225 244.0
MMD1_k127_20050_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000003509 242.0
MMD1_k127_20050_4 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000006294 205.0
MMD1_k127_20050_5 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000007451 192.0
MMD1_k127_20050_6 DsbA oxidoreductase - - - 0.0000000000000000000000000000000000000000000000001162 183.0
MMD1_k127_20050_7 Histidine kinase - - - 0.0000000000000000000000000000000000000012 167.0
MMD1_k127_20050_8 NMT1-like family K02051,K15553 - - 0.0000000000000000000000000000367 126.0
MMD1_k127_20050_9 - - - - 0.000000000000000000003625 96.0
MMD1_k127_2038529_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 493.0
MMD1_k127_2038529_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 459.0
MMD1_k127_2038529_10 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000001228 238.0
MMD1_k127_2038529_11 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000002523 222.0
MMD1_k127_2038529_12 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000002416 198.0
MMD1_k127_2038529_13 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000001344 165.0
MMD1_k127_2038529_14 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000001366 162.0
MMD1_k127_2038529_15 NMT1-like family K02051,K15553 - - 0.000000000000000000000000000000000000001021 160.0
MMD1_k127_2038529_16 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000000000000000000000008912 135.0
MMD1_k127_2038529_17 Dodecin K09165 - - 0.00000000000000000000007774 99.0
MMD1_k127_2038529_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 432.0
MMD1_k127_2038529_3 cell adhesion involved in biofilm formation K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 392.0
MMD1_k127_2038529_4 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 388.0
MMD1_k127_2038529_5 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 374.0
MMD1_k127_2038529_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 336.0
MMD1_k127_2038529_7 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 357.0
MMD1_k127_2038529_8 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 327.0
MMD1_k127_2038529_9 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005309 256.0
MMD1_k127_2067283_0 PFAM Cysteine-rich domain K08264 - 1.8.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 387.0
MMD1_k127_2067283_1 Receptor family ligand binding region K01999 - - 0.000008454 53.0
MMD1_k127_20735_0 ferredoxin oxidoreductase alpha subunit K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917 460.0
MMD1_k127_20735_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001385 263.0
MMD1_k127_20735_2 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000002046 222.0
MMD1_k127_20735_3 Pyruvate ferredoxin oxidoreductase K00171 - 1.2.7.1 0.000000000000000000000000000000000000002283 148.0
MMD1_k127_20735_4 YbaB/EbfC DNA-binding family K09747 - - 0.00000000000000000003248 90.0
MMD1_k127_2099963_0 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000006261 196.0
MMD1_k127_2099963_1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000005406 156.0
MMD1_k127_2099963_2 DUF167 K09131 - - 0.0000000000000000002331 90.0
MMD1_k127_2099963_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000009363 87.0
MMD1_k127_2142501_0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 K03738 - 1.2.7.5 1.382e-225 712.0
MMD1_k127_2142501_1 Molybdate transporter of MFS superfamily - - - 1.999e-196 618.0
MMD1_k127_2142501_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 558.0
MMD1_k127_2142501_3 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000107 207.0
MMD1_k127_2142501_4 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000001601 181.0
MMD1_k127_2142501_5 Transcriptional regulator, LysR family K02019 - - 0.00000000000000000000003057 103.0
MMD1_k127_2142501_7 ABC-2 family transporter protein - - - 0.00000005286 63.0
MMD1_k127_2206040_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 1.932e-290 902.0
MMD1_k127_2206040_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 6.602e-262 811.0
MMD1_k127_2206040_10 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000004976 240.0
MMD1_k127_2206040_11 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000007008 196.0
MMD1_k127_2206040_12 TRAP transporter solute receptor TAXI family - - - 0.000000000000000000000000000000000000000000000001609 183.0
MMD1_k127_2206040_13 Domain of unknown function DUF120 K01091 - 3.1.3.18 0.000000000000000000000007303 105.0
MMD1_k127_2206040_14 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) - - - 0.00000000000000001044 85.0
MMD1_k127_2206040_2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 7.766e-250 777.0
MMD1_k127_2206040_3 Uncharacterised protein family (UPF0261) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 548.0
MMD1_k127_2206040_4 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 383.0
MMD1_k127_2206040_5 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 308.0
MMD1_k127_2206040_6 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 314.0
MMD1_k127_2206040_7 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 288.0
MMD1_k127_2206040_8 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000005021 244.0
MMD1_k127_2206040_9 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009217 250.0
MMD1_k127_2218927_0 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 512.0
MMD1_k127_2218927_1 PFAM DegT DnrJ EryC1 StrS aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 362.0
MMD1_k127_2218927_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001269 266.0
MMD1_k127_2218927_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004539 258.0
MMD1_k127_2218927_4 PFAM Glycosyl transferase, group 1 K02844 - - 0.000000000000000000000000000000000000000008665 163.0
MMD1_k127_2218927_5 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000001318 115.0
MMD1_k127_2218927_6 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0001006 46.0
MMD1_k127_2220532_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 468.0
MMD1_k127_2238901_0 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.0000000000000000000000000000000000000007632 156.0
MMD1_k127_2238901_1 Peptidase C13 family - - - 0.0000000000000001068 90.0
MMD1_k127_2239593_0 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 304.0
MMD1_k127_2239593_1 ATPases associated with a variety of cellular activities K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002215 260.0
MMD1_k127_2239593_2 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006568 255.0
MMD1_k127_2239593_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000002328 198.0
MMD1_k127_2239593_4 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000007185 127.0
MMD1_k127_2239593_5 ATPases associated with a variety of cellular activities K01996 - - 0.00000519 49.0
MMD1_k127_224694_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 510.0
MMD1_k127_224694_1 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 473.0
MMD1_k127_224694_10 Diguanylate cyclase with GAF sensor - - - 0.000000000000000000000000000000000000000000000000197 190.0
MMD1_k127_224694_11 COGs COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.000000000000000000000000000000000000000000000002637 187.0
MMD1_k127_224694_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000009548 181.0
MMD1_k127_224694_13 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000000000000000354 152.0
MMD1_k127_224694_15 cheY-homologous receiver domain - - - 0.00008729 50.0
MMD1_k127_224694_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 449.0
MMD1_k127_224694_3 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 386.0
MMD1_k127_224694_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005841 287.0
MMD1_k127_224694_5 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000713 263.0
MMD1_k127_224694_6 Mammalian cell entry related domain protein K02067,K06192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000765 257.0
MMD1_k127_224694_7 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000006099 191.0
MMD1_k127_224694_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000009292 210.0
MMD1_k127_224694_9 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000004089 187.0
MMD1_k127_2266171_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 1.89e-252 807.0
MMD1_k127_2266171_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 548.0
MMD1_k127_2266171_10 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000004272 186.0
MMD1_k127_2266171_11 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000063 185.0
MMD1_k127_2266171_12 Polymer-forming cytoskeletal - - - 0.0000000000000000000000561 104.0
MMD1_k127_2266171_13 - - - - 0.000000000000000000004524 96.0
MMD1_k127_2266171_14 Domain of unknown function (DUF4124) - - - 0.0000004447 59.0
MMD1_k127_2266171_2 SMART Elongator protein 3 MiaB NifB K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 505.0
MMD1_k127_2266171_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 469.0
MMD1_k127_2266171_4 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 348.0
MMD1_k127_2266171_5 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002722 271.0
MMD1_k127_2266171_6 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008757 264.0
MMD1_k127_2266171_7 PFAM Uncharacterised BCR, COG1649 K11931 - - 0.0000000000000000000000000000000000000000000000000000000000000000001148 250.0
MMD1_k127_2266171_8 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000009697 207.0
MMD1_k127_2266171_9 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000005929 210.0
MMD1_k127_2266352_0 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001518 239.0
MMD1_k127_2266352_1 Protein of unknown function (DUF1579) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003945 235.0
MMD1_k127_2266352_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000001773 192.0
MMD1_k127_2266352_3 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000009478 167.0
MMD1_k127_2266352_4 Protein of unknown function (DUF1059) - - - 0.000000000000000000000009071 101.0
MMD1_k127_2266352_5 - - - - 0.00000000023 69.0
MMD1_k127_2266352_6 Lipocalin-like domain - - - 0.0000003329 55.0
MMD1_k127_2274362_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 549.0
MMD1_k127_2274362_2 Transcriptional regulatory protein, C terminal - - - 0.0001373 48.0
MMD1_k127_2303427_0 TIGRFAM Acetoacetyl-CoA synthase K01907 - 6.2.1.16 0.0 1007.0
MMD1_k127_2303427_1 HEAT repeats K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 541.0
MMD1_k127_2303427_10 PFAM Cysteine-rich domain K08264 - 1.8.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 419.0
MMD1_k127_2303427_11 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 378.0
MMD1_k127_2303427_12 Methionyl-tRNA formyltransferase K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009088 345.0
MMD1_k127_2303427_13 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 336.0
MMD1_k127_2303427_14 Lipoate-protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000007397 261.0
MMD1_k127_2303427_15 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001387 255.0
MMD1_k127_2303427_16 Glycine cleavage system H protein K02437 - - 0.0000000000000000000000000000000000000000000000005432 179.0
MMD1_k127_2303427_17 FCD K05799 - - 0.000000000000000000000000000000000000000000000000945 183.0
MMD1_k127_2303427_18 - - - - 0.000000000000000000000000000000002201 130.0
MMD1_k127_2303427_19 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000000004603 120.0
MMD1_k127_2303427_2 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 524.0
MMD1_k127_2303427_20 4Fe-4S binding domain K00176 - 1.2.7.3 0.0000000000000000000001006 99.0
MMD1_k127_2303427_21 4Fe-4S dicluster domain - - - 0.00000000000006636 82.0
MMD1_k127_2303427_22 FAD linked oxidase - - - 0.0007563 44.0
MMD1_k127_2303427_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 521.0
MMD1_k127_2303427_4 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 480.0
MMD1_k127_2303427_5 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 444.0
MMD1_k127_2303427_6 Aminotransferase class-V K00830,K00839 GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 428.0
MMD1_k127_2303427_7 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 430.0
MMD1_k127_2303427_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 421.0
MMD1_k127_2303427_9 carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 423.0
MMD1_k127_2309314_0 - - - - 0.0000000000000000000000000000000006692 150.0
MMD1_k127_2309314_1 - - - - 0.0000000000000000000000000000002654 137.0
MMD1_k127_2309314_2 Putative bacterial lipoprotein (DUF799) - - - 0.00000000000000000000000006323 114.0
MMD1_k127_2310737_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 2.658e-200 635.0
MMD1_k127_2310737_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 300.0
MMD1_k127_2310737_10 Coenzyme A transferase K01026 - 2.8.3.1 0.0007844 42.0
MMD1_k127_2310737_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002271 278.0
MMD1_k127_2310737_3 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002507 265.0
MMD1_k127_2310737_4 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002149 249.0
MMD1_k127_2310737_5 PFAM Branched-chain amino acid transport system permease component K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002734 249.0
MMD1_k127_2310737_6 PFAM MaoC domain protein dehydratase K17865 - 4.2.1.55 0.0000000000000000000000000000000000000000000000000000109 192.0
MMD1_k127_2310737_7 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000005958 195.0
MMD1_k127_2310737_8 polynucleotide 5'-hydroxyl-kinase activity K06947 - - 0.00000000000000000000000000000000000001076 156.0
MMD1_k127_2310737_9 Receptor family ligand binding region K01999 - - 0.00000000000000000000000002076 111.0
MMD1_k127_2351886_0 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 1.434e-225 702.0
MMD1_k127_2351886_1 TIGRFAM glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 346.0
MMD1_k127_2351886_2 phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 311.0
MMD1_k127_2351886_3 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000648 277.0
MMD1_k127_2351886_4 PFAM Alkaline phosphatase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000027 277.0
MMD1_k127_2351886_5 BFD-like [2Fe-2S] binding domain K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003882 255.0
MMD1_k127_2351886_6 Glycerol-3-phosphate dehydrogenase K00112 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000002193 241.0
MMD1_k127_2351886_7 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000001043 202.0
MMD1_k127_2351886_8 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00002902 50.0
MMD1_k127_2352518_0 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000001447 259.0
MMD1_k127_2352518_1 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000832 192.0
MMD1_k127_2352518_2 membrane - - - 0.0000000000000000000000000000000004646 134.0
MMD1_k127_2352518_3 YtxH-like protein - - - 0.0000000000000000000000000009593 115.0
MMD1_k127_2352518_4 Smr domain - - - 0.0000000000000000000000001441 108.0
MMD1_k127_2352518_6 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.000000000003851 67.0
MMD1_k127_237938_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1178.0
MMD1_k127_237938_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000004157 241.0
MMD1_k127_237938_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000003108 190.0
MMD1_k127_237938_4 Glycoprotease family K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000006743 100.0
MMD1_k127_2387524_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 1.92e-313 973.0
MMD1_k127_2387524_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 2.825e-310 965.0
MMD1_k127_2387524_10 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001474 276.0
MMD1_k127_2387524_11 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000009881 218.0
MMD1_k127_2387524_12 GntR family - - - 0.000000000000000000000000000000000000000000000000000000000001948 216.0
MMD1_k127_2387524_13 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000003634 181.0
MMD1_k127_2387524_14 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000001046 153.0
MMD1_k127_2387524_15 Methyltransferase domain - - - 0.0000000000000000000000000000000000000558 160.0
MMD1_k127_2387524_16 - - - - 0.0000000000000000000000000000000009994 132.0
MMD1_k127_2387524_17 Major Facilitator - - - 0.000000000000000000000000003048 121.0
MMD1_k127_2387524_18 - - - - 0.00000000000000000000000001732 111.0
MMD1_k127_2387524_19 - - - - 0.000000124 59.0
MMD1_k127_2387524_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 3.569e-259 807.0
MMD1_k127_2387524_20 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0005693 43.0
MMD1_k127_2387524_21 - - - - 0.0006343 43.0
MMD1_k127_2387524_3 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 3.557e-251 786.0
MMD1_k127_2387524_4 PFAM Enoyl-CoA hydratase isomerase - - - 3.256e-213 682.0
MMD1_k127_2387524_5 Tripartite ATP-independent periplasmic transporter, DctM component - - - 7.537e-204 641.0
MMD1_k127_2387524_6 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.398e-194 614.0
MMD1_k127_2387524_7 PFAM AMP-dependent synthetase and ligase K00666,K01897,K12508 - 6.2.1.3,6.2.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 452.0
MMD1_k127_2387524_8 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 432.0
MMD1_k127_2387524_9 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 378.0
MMD1_k127_2407070_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 503.0
MMD1_k127_2407070_1 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001112 241.0
MMD1_k127_2407070_2 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000002427 104.0
MMD1_k127_2407070_3 nitrate reductase, gamma subunit - - - 0.000000000000000000000009748 109.0
MMD1_k127_2407070_4 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000007767 100.0
MMD1_k127_2407070_5 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000000111 74.0
MMD1_k127_2407070_6 Putative regulatory protein - - - 0.00000001476 57.0
MMD1_k127_2428620_0 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 308.0
MMD1_k127_2428620_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000006211 246.0
MMD1_k127_2428620_2 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000006176 217.0
MMD1_k127_2439615_0 Sigma-54 interaction domain K07714,K07715 - - 7.438e-222 695.0
MMD1_k127_2439615_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 529.0
MMD1_k127_2439615_10 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000001982 75.0
MMD1_k127_2439615_11 response regulator - - - 0.000000000002126 70.0
MMD1_k127_2439615_12 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000001854 60.0
MMD1_k127_2439615_2 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 485.0
MMD1_k127_2439615_3 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 323.0
MMD1_k127_2439615_4 Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002434 268.0
MMD1_k127_2439615_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001603 238.0
MMD1_k127_2439615_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000002758 235.0
MMD1_k127_2439615_7 nuclear chromosome segregation - - - 0.000000000000000000000000006653 121.0
MMD1_k127_2439615_8 nuclear chromosome segregation - - - 0.00000000000000000003894 100.0
MMD1_k127_2439615_9 cheY-homologous receiver domain - - - 0.0000000000000009384 81.0
MMD1_k127_2461131_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.138e-217 691.0
MMD1_k127_2461131_1 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 627.0
MMD1_k127_2461131_10 Nitroreductase family - - - 0.000000000006455 67.0
MMD1_k127_2461131_2 Elongation factor Tu domain 2 K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 610.0
MMD1_k127_2461131_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 424.0
MMD1_k127_2461131_4 UDP binding domain K02474,K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 329.0
MMD1_k127_2461131_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000004346 220.0
MMD1_k127_2461131_6 8-oxoguanine DNA glycosylase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000009259 221.0
MMD1_k127_2461131_7 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000007826 152.0
MMD1_k127_2461131_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000001038 108.0
MMD1_k127_2461131_9 Tetratricopeptide repeat-like domain - - - 0.000000000000001175 85.0
MMD1_k127_2474241_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 518.0
MMD1_k127_2474241_1 binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 367.0
MMD1_k127_253074_0 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 358.0
MMD1_k127_253074_1 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 295.0
MMD1_k127_253074_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000006864 51.0
MMD1_k127_2533277_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 452.0
MMD1_k127_2533277_1 Amino acid amide ABC transporter ATP-binding protein 1, HAAT family K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 362.0
MMD1_k127_2533277_2 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 348.0
MMD1_k127_2533277_3 branched-chain amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 299.0
MMD1_k127_2533277_4 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000001097 99.0
MMD1_k127_2585046_0 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 343.0
MMD1_k127_2585046_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000002229 153.0
MMD1_k127_2585046_2 Pfam:DUF1049 - - - 0.0000205 50.0
MMD1_k127_259742_0 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 395.0
MMD1_k127_259742_1 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 359.0
MMD1_k127_259742_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 345.0
MMD1_k127_259742_3 asparagine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 347.0
MMD1_k127_259742_4 PFAM PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 316.0
MMD1_k127_259742_5 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000005026 217.0
MMD1_k127_259742_6 - - - - 0.000000000000000000000000000000000000000000000008003 183.0
MMD1_k127_259742_7 PFAM response regulator receiver - - - 0.0000000000000000000000000000009682 126.0
MMD1_k127_259742_8 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000008788 112.0
MMD1_k127_2600201_0 nitric oxide reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000002517 209.0
MMD1_k127_2600201_1 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000000001638 172.0
MMD1_k127_2600201_2 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.0000000000000000000000000008455 112.0
MMD1_k127_2600201_3 GUN4-like - - - 0.000000000000000003233 89.0
MMD1_k127_2613933_0 FAD binding domain K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 7.429e-274 850.0
MMD1_k127_2613933_1 Endoribonuclease that initiates mRNA decay K18682 - - 6.931e-220 694.0
MMD1_k127_2613933_11 - - - - 0.0000000108 56.0
MMD1_k127_2613933_12 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000005093 59.0
MMD1_k127_2613933_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 519.0
MMD1_k127_2613933_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 494.0
MMD1_k127_2613933_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 486.0
MMD1_k127_2613933_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 413.0
MMD1_k127_2613933_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 407.0
MMD1_k127_2613933_7 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 339.0
MMD1_k127_2613933_8 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009265 334.0
MMD1_k127_2613933_9 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000005557 229.0
MMD1_k127_2634810_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 323.0
MMD1_k127_2634810_1 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001108 287.0
MMD1_k127_2634810_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000616 171.0
MMD1_k127_2634810_3 - - - - 0.000000000000000000000000000000000000002605 153.0
MMD1_k127_2634810_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000004276 149.0
MMD1_k127_2634810_5 phosphorelay signal transduction system K07658 - - 0.0000000000000000000003779 100.0
MMD1_k127_2634810_6 Tetratricopeptide repeat - - - 0.000000000000000000002069 106.0
MMD1_k127_2646092_0 AAA domain K02450 - - 0.00000000000000000000000000000000000000000007223 182.0
MMD1_k127_2646092_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000004739 73.0
MMD1_k127_2646092_2 - - - - 0.00001273 54.0
MMD1_k127_2690015_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 569.0
MMD1_k127_2690015_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 452.0
MMD1_k127_2690015_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 389.0
MMD1_k127_2690015_3 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 385.0
MMD1_k127_2690015_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 315.0
MMD1_k127_2690015_5 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000024 168.0
MMD1_k127_2690015_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000008043 160.0
MMD1_k127_2690015_7 PFAM PP-loop domain protein K06864 - - 0.00000000000000000000000000000000000001099 148.0
MMD1_k127_2690015_8 - - - - 0.00000000000000001431 88.0
MMD1_k127_2707565_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 2.811e-238 749.0
MMD1_k127_2707565_1 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001731 287.0
MMD1_k127_273189_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.1,2.1.2.10,2.2.1.8 0.0 1022.0
MMD1_k127_273189_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.932e-222 696.0
MMD1_k127_273189_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000692 152.0
MMD1_k127_273189_3 YhhN family - - - 0.00000000000000000000000003273 116.0
MMD1_k127_273189_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000008145 72.0
MMD1_k127_273189_5 PFAM transposase IS116 IS110 IS902 family protein - - - 0.0000168 47.0
MMD1_k127_2738795_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 596.0
MMD1_k127_2738795_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 514.0
MMD1_k127_2738795_2 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 443.0
MMD1_k127_2738795_3 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 317.0
MMD1_k127_2738795_4 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002493 281.0
MMD1_k127_2738795_5 TIGRFAM acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000002477 267.0
MMD1_k127_2738795_6 nicotinamidase activity - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008936,GO:0009117,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019362,GO:0019637,GO:0019674,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901360,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000002689 201.0
MMD1_k127_2738795_7 branched-chain amino acid transport system, permease component K01998 - - 0.0000004717 55.0
MMD1_k127_27623_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 383.0
MMD1_k127_27623_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 373.0
MMD1_k127_27623_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000006188 234.0
MMD1_k127_27623_3 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000113 213.0
MMD1_k127_27623_4 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000000000000000000000000000000006462 207.0
MMD1_k127_27623_5 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000008277 92.0
MMD1_k127_2803648_0 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 352.0
MMD1_k127_2803648_1 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000005863 214.0
MMD1_k127_2803648_2 cheY-homologous receiver domain - - - 0.000000000000004912 80.0
MMD1_k127_2808652_0 phosphate ion binding K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 348.0
MMD1_k127_2808652_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 338.0
MMD1_k127_2808652_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036,K02068,K06857 - 3.6.3.27,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 329.0
MMD1_k127_2808652_3 phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 317.0
MMD1_k127_2808652_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000007178 183.0
MMD1_k127_2808652_5 - - - - 0.00000000000000000004427 91.0
MMD1_k127_2830136_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007226 503.0
MMD1_k127_2830136_1 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 480.0
MMD1_k127_2830136_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 458.0
MMD1_k127_2830136_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000315 235.0
MMD1_k127_2830136_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000001835 205.0
MMD1_k127_2830136_5 NusB family K03625 - - 0.00000000000000000000000000000000000001978 149.0
MMD1_k127_2830136_6 YacP-like NYN domain K06962 - - 0.0000000000000000000000000009153 118.0
MMD1_k127_2830136_7 FCD - - - 0.000000001796 62.0
MMD1_k127_2830136_9 Cytosol aminopeptidase family, N-terminal domain - - - 0.00000009592 61.0
MMD1_k127_2850023_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 594.0
MMD1_k127_2850023_1 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 342.0
MMD1_k127_2850023_2 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 340.0
MMD1_k127_2850023_3 COG0411 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 325.0
MMD1_k127_2850023_4 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001567 274.0
MMD1_k127_2850023_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000002503 125.0
MMD1_k127_2850023_6 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000001211 94.0
MMD1_k127_287866_0 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 317.0
MMD1_k127_287866_1 Domain of unknown function (DUF697) - - - 0.000000000000000000000000000000000000000000000000000002302 204.0
MMD1_k127_287866_2 FCD K05799 - - 0.00000000000000000000000000000000000000000000000000002377 198.0
MMD1_k127_287866_3 - - - - 0.000000000000000000000000000000000000000000000004543 175.0
MMD1_k127_287866_4 NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000006547 183.0
MMD1_k127_287866_5 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000001108 171.0
MMD1_k127_287866_6 Haem-degrading - - - 0.0000000000000000000000000004128 120.0
MMD1_k127_288611_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 420.0
MMD1_k127_288611_1 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008064 279.0
MMD1_k127_288611_2 DisA bacterial checkpoint controller nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000004484 242.0
MMD1_k127_288611_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000001749 188.0
MMD1_k127_288611_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000003485 177.0
MMD1_k127_2914399_0 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 290.0
MMD1_k127_2914399_1 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001906 266.0
MMD1_k127_2914399_2 PFAM Pterin binding enzyme K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000005156 253.0
MMD1_k127_2914399_3 cobalamin binding K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000002806 241.0
MMD1_k127_2914399_4 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000004739 153.0
MMD1_k127_2939592_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 1.658e-220 706.0
MMD1_k127_2939592_1 PFAM glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 506.0
MMD1_k127_2939592_2 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005743 278.0
MMD1_k127_2939592_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000002991 199.0
MMD1_k127_2939592_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000001736 169.0
MMD1_k127_2939592_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000001486 142.0
MMD1_k127_2939592_6 glycyl-tRNA aminoacylation K01879 - 6.1.1.14 0.00000000000000004447 82.0
MMD1_k127_293986_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 538.0
MMD1_k127_293986_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 331.0
MMD1_k127_293986_2 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
MMD1_k127_293986_3 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006644 276.0
MMD1_k127_293986_4 Involved in chromosome partitioning - - - 0.000000000000000000000000000000000000000000001444 176.0
MMD1_k127_293986_5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061602,GO:0070567,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902759,GO:1902760 1.1.1.328,2.7.7.76 0.000000000000000000000000000000000001834 149.0
MMD1_k127_293986_6 DNA excision K02806 - - 0.00000000001582 67.0
MMD1_k127_2944390_0 carbon starvation protein CstA K06200 - - 5.049e-280 868.0
MMD1_k127_2944390_1 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 580.0
MMD1_k127_2944390_10 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000007366 93.0
MMD1_k127_2944390_11 regulatory protein, FmdB family - - - 0.000000000000001256 78.0
MMD1_k127_2944390_12 AAA domain K07028 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009987,GO:0030312,GO:0044464,GO:0044764,GO:0046812,GO:0051704,GO:0071944 - 0.0000008651 59.0
MMD1_k127_2944390_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 537.0
MMD1_k127_2944390_3 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 343.0
MMD1_k127_2944390_4 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 327.0
MMD1_k127_2944390_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 314.0
MMD1_k127_2944390_6 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002178 279.0
MMD1_k127_2944390_7 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005504 265.0
MMD1_k127_2944390_8 - - - - 0.0000000000000000000000000000000000000000000006725 167.0
MMD1_k127_2944390_9 - - - - 0.00000000000000000000000000000003481 138.0
MMD1_k127_2976625_0 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 578.0
MMD1_k127_2976625_1 COG1233 Phytoene dehydrogenase and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 574.0
MMD1_k127_2976625_2 Chase2 domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 540.0
MMD1_k127_2976625_3 Uncharacterised protein family (UPF0261) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 359.0
MMD1_k127_2976625_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 339.0
MMD1_k127_2976625_5 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000003767 228.0
MMD1_k127_2976625_6 LysR substrate binding domain K21711 - - 0.0000000000000000000000000000000000000000000000000000000006302 213.0
MMD1_k127_2976625_7 - - - - 0.0000000000000000000000000000000000000000000000000000000009484 206.0
MMD1_k127_2976625_8 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000009182 158.0
MMD1_k127_2976625_9 FecR protein - - - 0.00000000000000000000000000000000006566 138.0
MMD1_k127_2982967_0 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009227 462.0
MMD1_k127_2982967_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 441.0
MMD1_k127_2982967_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 295.0
MMD1_k127_2982967_3 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000211 256.0
MMD1_k127_2982967_4 Alpha/beta hydrolase family K06889 - - 0.000000000000009593 75.0
MMD1_k127_2982967_5 Acid phosphatase homologues K19302 - 3.6.1.27 0.0001727 48.0
MMD1_k127_2984883_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 8.135e-224 708.0
MMD1_k127_2984883_1 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 6.023e-216 696.0
MMD1_k127_2984883_10 Cytochrome c K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 308.0
MMD1_k127_2984883_11 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 289.0
MMD1_k127_2984883_12 Cytochrome c K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004084 278.0
MMD1_k127_2984883_13 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000912 249.0
MMD1_k127_2984883_14 PFAM iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000000003106 221.0
MMD1_k127_2984883_15 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000001385 214.0
MMD1_k127_2984883_16 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000537 210.0
MMD1_k127_2984883_17 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000003041 195.0
MMD1_k127_2984883_18 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000000000006307 198.0
MMD1_k127_2984883_19 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000002148 160.0
MMD1_k127_2984883_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 4.238e-196 631.0
MMD1_k127_2984883_20 Cytochrome b(C-terminal)/b6/petD - - - 0.00000000000000000000000000000000000000007332 158.0
MMD1_k127_2984883_21 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000002096 132.0
MMD1_k127_2984883_22 Cytochrome c K02720 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0009521,GO:0009523,GO:0009579,GO:0016020,GO:0030075,GO:0030096,GO:0032991,GO:0034357,GO:0042651,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044425,GO:0044436,GO:0044444,GO:0044459,GO:0044464,GO:0071944,GO:0098796,GO:0098797 - 0.000000000000000000000000000001837 126.0
MMD1_k127_2984883_23 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000003224 119.0
MMD1_k127_2984883_25 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000002346 76.0
MMD1_k127_2984883_26 Domain of unknown function (DUF362) K07138 - - 0.00000000002368 63.0
MMD1_k127_2984883_3 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 611.0
MMD1_k127_2984883_4 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 582.0
MMD1_k127_2984883_5 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 507.0
MMD1_k127_2984883_6 PFAM 4Fe-4S K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 409.0
MMD1_k127_2984883_7 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 335.0
MMD1_k127_2984883_8 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 324.0
MMD1_k127_2984883_9 COG0618 Exopolyphosphatase-related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 317.0
MMD1_k127_2998493_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000001385 191.0
MMD1_k127_2998493_1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000784 178.0
MMD1_k127_2998493_2 Alkylmercury lyase - - - 0.0000000000122 66.0
MMD1_k127_2998493_4 Alkylmercury lyase - - - 0.000001612 50.0
MMD1_k127_2998493_6 Helix-turn-helix domain - - - 0.000134 47.0
MMD1_k127_3010583_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 611.0
MMD1_k127_3010583_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 434.0
MMD1_k127_3010583_2 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 391.0
MMD1_k127_3010583_3 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 321.0
MMD1_k127_3010583_4 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 312.0
MMD1_k127_3010583_5 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006329 279.0
MMD1_k127_3010583_6 Fumarate K01678 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000102 261.0
MMD1_k127_3010583_7 UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000002689 243.0
MMD1_k127_3010583_8 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000002921 138.0
MMD1_k127_3010583_9 Conserved carboxylase domain K01960 - 6.4.1.1 0.000000001428 59.0
MMD1_k127_3011467_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 3.178e-206 650.0
MMD1_k127_3011467_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 459.0
MMD1_k127_3011467_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 312.0
MMD1_k127_3011467_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 297.0
MMD1_k127_3011467_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000005255 209.0
MMD1_k127_3011467_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000006233 180.0
MMD1_k127_3011467_6 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000003344 150.0
MMD1_k127_3011467_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.0000000000000000000000000000000001223 133.0
MMD1_k127_3011467_8 Binds to the 23S rRNA K02876 - - 0.00000000000000000001912 93.0
MMD1_k127_3011467_9 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000006958 71.0
MMD1_k127_301671_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 8.124e-197 640.0
MMD1_k127_301671_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 466.0
MMD1_k127_301671_10 membrane-associated protein K03975 - - 0.0000000000000000000000002341 113.0
MMD1_k127_301671_11 - - - - 0.000000000000000000000007249 102.0
MMD1_k127_301671_12 branched-chain amino acid - - - 0.00000000000000000002646 93.0
MMD1_k127_301671_13 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000000002777 80.0
MMD1_k127_301671_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 399.0
MMD1_k127_301671_3 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 311.0
MMD1_k127_301671_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008578 276.0
MMD1_k127_301671_5 Histidine kinase HAMP K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000001919 243.0
MMD1_k127_301671_6 PFAM AzlC family protein - - - 0.00000000000000000000000000000000000000000000000000000000000004361 222.0
MMD1_k127_301671_7 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000221 205.0
MMD1_k127_301671_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000003205 204.0
MMD1_k127_301671_9 membrane K08978 - - 0.0000000000000000000000000000000000002654 145.0
MMD1_k127_3022884_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 611.0
MMD1_k127_3022884_1 membrane protein involved in D-alanine export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 584.0
MMD1_k127_3022884_10 Glycosyltransferase family 17 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007898 261.0
MMD1_k127_3022884_11 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000001035 246.0
MMD1_k127_3022884_12 Uncharacterized conserved protein (DUF2304) K09153 - - 0.000000000000000000000000000000000000007328 148.0
MMD1_k127_3022884_13 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000026 133.0
MMD1_k127_3022884_14 Dodecin K09165 - - 0.0000000000000000000005317 97.0
MMD1_k127_3022884_15 Methionine biosynthesis protein MetW - - - 0.000000000000003418 83.0
MMD1_k127_3022884_16 PFAM Methyltransferase type 11 - - - 0.000000000006871 74.0
MMD1_k127_3022884_17 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000001781 58.0
MMD1_k127_3022884_18 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.00005813 55.0
MMD1_k127_3022884_2 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 402.0
MMD1_k127_3022884_3 TIGRFAM acetylornithine and succinylornithine aminotransferase K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 375.0
MMD1_k127_3022884_4 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 367.0
MMD1_k127_3022884_5 glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 326.0
MMD1_k127_3022884_6 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 320.0
MMD1_k127_3022884_7 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 312.0
MMD1_k127_3022884_8 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003409 282.0
MMD1_k127_3022884_9 Domain of unknown function (DUF3473) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006598 267.0
MMD1_k127_3035469_0 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 337.0
MMD1_k127_3035469_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005212 241.0
MMD1_k127_3035469_2 Biotin-protein ligase, N terminal - - - 0.0000000000000000000000000000000000000001421 158.0
MMD1_k127_3035469_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.000000000000000000001235 99.0
MMD1_k127_3035469_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000002621 74.0
MMD1_k127_3066660_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 8.36e-282 884.0
MMD1_k127_3066660_1 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 443.0
MMD1_k127_3066660_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 347.0
MMD1_k127_3066660_3 LysM domain - - - 0.0000000000000311 78.0
MMD1_k127_3070743_0 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 2.545e-198 623.0
MMD1_k127_3070743_1 Isocitrate/isopropylmalate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 557.0
MMD1_k127_3070743_10 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.00000000000000000000000000000000001097 139.0
MMD1_k127_3070743_11 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000004376 138.0
MMD1_k127_3070743_12 Domain of unknown function (DUF4160) - - - 0.000000000000000000000000009796 111.0
MMD1_k127_3070743_13 - - - - 0.00000000000000009939 84.0
MMD1_k127_3070743_14 Protein of unknown function (DUF2442) - - - 0.0000000000000004233 82.0
MMD1_k127_3070743_15 B12 binding domain K04034 - 1.21.98.3 0.000000000004152 66.0
MMD1_k127_3070743_16 Helix-turn-helix domain - - - 0.00000007674 53.0
MMD1_k127_3070743_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 540.0
MMD1_k127_3070743_3 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 481.0
MMD1_k127_3070743_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 406.0
MMD1_k127_3070743_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 342.0
MMD1_k127_3070743_6 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 297.0
MMD1_k127_3070743_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002815 267.0
MMD1_k127_3070743_8 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009475 253.0
MMD1_k127_3070743_9 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000003526 254.0
MMD1_k127_3071605_0 Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 475.0
MMD1_k127_3071605_1 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 456.0
MMD1_k127_3071605_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001421 270.0
MMD1_k127_3071605_3 FeS cluster assembly scaffold protein NifU K04488 - - 0.000000000000000000000000000006951 124.0
MMD1_k127_3071605_4 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000163 88.0
MMD1_k127_3071605_5 Iron-sulfur cluster-binding domain - - - 0.0000000009862 64.0
MMD1_k127_3071605_6 Domain of unknown function (DUF4410) - - - 0.00006845 52.0
MMD1_k127_3071605_8 SPW repeat - - - 0.0005623 44.0
MMD1_k127_3075941_0 HD domain - - - 0.00000000000000000000000000000911 126.0
MMD1_k127_3075941_2 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000006899 98.0
MMD1_k127_3075941_3 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000000000000009825 78.0
MMD1_k127_3075941_5 Bacterial regulatory protein, Fis family K02584 - - 0.000008958 57.0
MMD1_k127_3075941_6 Bacterial regulatory protein, Fis family K07712 - - 0.00003766 55.0
MMD1_k127_3075941_7 PFAM Type IV pilus assembly PilZ - - - 0.00005419 51.0
MMD1_k127_3091518_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.001e-254 795.0
MMD1_k127_3091518_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 609.0
MMD1_k127_3091518_10 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 362.0
MMD1_k127_3091518_11 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 316.0
MMD1_k127_3091518_12 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 302.0
MMD1_k127_3091518_13 ADP-ribosylation Crystallin J1 - - - 0.00000000000000000000000000000000000000000000000000000000000000003194 235.0
MMD1_k127_3091518_14 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000703 170.0
MMD1_k127_3091518_15 Adenylate cyclase - - - 0.00000000000000000000000000000000000000001995 163.0
MMD1_k127_3091518_16 PTS system fructose IIA component K02793 - 2.7.1.191 0.00000000000000000000000000000000000001383 149.0
MMD1_k127_3091518_17 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000001467 142.0
MMD1_k127_3091518_18 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000744 136.0
MMD1_k127_3091518_19 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000000000000001617 122.0
MMD1_k127_3091518_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 608.0
MMD1_k127_3091518_20 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.0000000000001691 78.0
MMD1_k127_3091518_21 OstA-like protein K09774 - - 0.000000000002296 74.0
MMD1_k127_3091518_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 590.0
MMD1_k127_3091518_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 518.0
MMD1_k127_3091518_5 Proposed homoserine kinase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 459.0
MMD1_k127_3091518_6 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 437.0
MMD1_k127_3091518_7 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 411.0
MMD1_k127_3091518_8 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 409.0
MMD1_k127_3091518_9 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 393.0
MMD1_k127_3094273_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007637 389.0
MMD1_k127_3094273_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000001342 138.0
MMD1_k127_3094273_2 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000000000000000002358 126.0
MMD1_k127_3094273_3 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.0000006047 52.0
MMD1_k127_3106342_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 541.0
MMD1_k127_3106342_1 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 469.0
MMD1_k127_3106342_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 421.0
MMD1_k127_3106342_3 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 365.0
MMD1_k127_3106342_4 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 362.0
MMD1_k127_3106342_5 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000001869 139.0
MMD1_k127_3106342_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000008586 86.0
MMD1_k127_3141098_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K07469 - 1.2.99.7 0.0 1242.0
MMD1_k127_3141098_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 1.172e-274 853.0
MMD1_k127_3141098_2 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 340.0
MMD1_k127_3141098_3 Protein of unknown function DUF89 K09680 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000001886 245.0
MMD1_k127_3141098_4 heme oxygenase (decyclizing) activity K21481 - 1.14.99.57 0.00000000000000000000000000000000000008333 144.0
MMD1_k127_3146758_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 479.0
MMD1_k127_3146758_1 pyridine nucleotide-disulphide oxidoreductase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 421.0
MMD1_k127_3146758_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 366.0
MMD1_k127_3146758_3 HD domain K07023 - - 0.00000000000000000000000000000000000000000000002256 177.0
MMD1_k127_3146758_4 Poly-gamma-glutamate hydrolase - - - 0.00000000000000000000000000000000000000000001021 169.0
MMD1_k127_3146758_5 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000000000005608 145.0
MMD1_k127_3146758_6 PFAM Class I peptide chain release factor - - - 0.000000000000000000000000000000000003817 141.0
MMD1_k127_3146758_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000001 117.0
MMD1_k127_3165774_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 578.0
MMD1_k127_3165774_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 369.0
MMD1_k127_3165774_2 PFAM response regulator receiver K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000263 274.0
MMD1_k127_3165774_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000001922 173.0
MMD1_k127_3165774_4 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000001472 171.0
MMD1_k127_3165774_5 Histidine kinase K07636 - 2.7.13.3 0.000000000000000223 86.0
MMD1_k127_3165774_6 - - - - 0.000001603 56.0
MMD1_k127_316967_0 FecR protein - - - 0.0 1219.0
MMD1_k127_316967_1 CHASE2 K01768 - 4.6.1.1 3.062e-240 764.0
MMD1_k127_316967_10 AraC-like ligand binding domain - - - 0.000000000000005388 78.0
MMD1_k127_316967_11 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 0.000000000002015 77.0
MMD1_k127_316967_12 - - - - 0.00000001108 57.0
MMD1_k127_316967_13 PFAM Bile acid sodium symporter K03325 - - 0.0007442 43.0
MMD1_k127_316967_2 Bacterial transferase hexapeptide (six repeats) K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002607 281.0
MMD1_k127_316967_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004443 271.0
MMD1_k127_316967_4 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007383 264.0
MMD1_k127_316967_5 Cytochrome C biogenesis protein - - - 0.0000000000000000000000000000000000000000000000000000005989 211.0
MMD1_k127_316967_6 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000004055 194.0
MMD1_k127_316967_7 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000003567 155.0
MMD1_k127_316967_8 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000004887 110.0
MMD1_k127_316967_9 PFAM Thioredoxin K03671 - - 0.00000000000000000000003212 111.0
MMD1_k127_3194988_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 314.0
MMD1_k127_3194988_1 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000006817 260.0
MMD1_k127_3194988_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000005741 190.0
MMD1_k127_3194988_3 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0009399,GO:0071941,GO:0097159,GO:1901363 - 0.00000000000003768 75.0
MMD1_k127_3194988_4 PFAM phosphatidate cytidylyltransferase - - - 0.0001514 48.0
MMD1_k127_3195283_0 PFAM alpha beta hydrolase fold K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009491 271.0
MMD1_k127_3195283_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002834 259.0
MMD1_k127_3195283_2 Putative MetA-pathway of phenol degradation - - - 0.00000000000000007232 87.0
MMD1_k127_3195283_3 - - - - 0.00000001143 59.0
MMD1_k127_3201340_0 PFAM Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000885 349.0
MMD1_k127_3201340_1 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001098 275.0
MMD1_k127_3201340_2 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
MMD1_k127_3201340_3 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000003427 203.0
MMD1_k127_3201340_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000003604 173.0
MMD1_k127_3201340_5 Glyoxalase-like domain K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000001394 165.0
MMD1_k127_3201340_6 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.000000000000000000000000000000000000001744 154.0
MMD1_k127_3201340_8 - - - - 0.00000000000001899 75.0
MMD1_k127_3243964_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 334.0
MMD1_k127_3243964_1 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 297.0
MMD1_k127_3243964_2 PFAM Smr protein MutS2 - - - 0.00000000000000000000000000000000000000000000000007652 186.0
MMD1_k127_3243964_3 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000006971 156.0
MMD1_k127_3243964_4 acetyltransferase K19113 - - 0.000000007143 62.0
MMD1_k127_3244676_0 Alpha amylase, catalytic domain K00700,K01236 - 2.4.1.18,3.2.1.141 3.411e-251 796.0
MMD1_k127_3244676_1 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000009157 252.0
MMD1_k127_3244676_2 regulation of ruffle assembly - - - 0.00000000000000000000000000000000000000000000000000000000001993 214.0
MMD1_k127_3244676_4 PFAM Histone deacetylase K04768 - - 0.0000002692 53.0
MMD1_k127_3252853_0 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 310.0
MMD1_k127_3252853_1 Belongs to the glycosyl hydrolase 26 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001192 241.0
MMD1_k127_3436446_0 AMP-binding enzyme K01897 - 6.2.1.3 3.844e-212 676.0
MMD1_k127_3436446_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 564.0
MMD1_k127_3436446_10 PFAM ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 374.0
MMD1_k127_3436446_11 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 360.0
MMD1_k127_3436446_12 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 355.0
MMD1_k127_3436446_13 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 343.0
MMD1_k127_3436446_14 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 340.0
MMD1_k127_3436446_15 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 325.0
MMD1_k127_3436446_16 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 305.0
MMD1_k127_3436446_17 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 299.0
MMD1_k127_3436446_18 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005249 275.0
MMD1_k127_3436446_19 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000001064 227.0
MMD1_k127_3436446_2 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 509.0
MMD1_k127_3436446_20 PFAM Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000000000004926 180.0
MMD1_k127_3436446_21 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000000000002468 162.0
MMD1_k127_3436446_22 Beta-ketoacyl synthase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000003643 162.0
MMD1_k127_3436446_23 MaoC like domain - - - 0.00000000000000000000000000000000000000008843 157.0
MMD1_k127_3436446_24 binding domain protein - - - 0.000000000000000000000000000000000003577 147.0
MMD1_k127_3436446_25 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000002701 149.0
MMD1_k127_3436446_26 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000002165 137.0
MMD1_k127_3436446_27 RNA recognition motif - - - 0.000000000000000000000000000002135 124.0
MMD1_k127_3436446_28 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000368 102.0
MMD1_k127_3436446_29 Belongs to the 'phage' integrase family - - - 0.000000007994 61.0
MMD1_k127_3436446_3 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 505.0
MMD1_k127_3436446_32 Probable zinc-ribbon domain - - - 0.0003189 45.0
MMD1_k127_3436446_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009684 508.0
MMD1_k127_3436446_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 494.0
MMD1_k127_3436446_6 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 491.0
MMD1_k127_3436446_7 PFAM acyl-CoA dehydrogenase domain protein K00249,K11731 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 445.0
MMD1_k127_3436446_8 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 398.0
MMD1_k127_3436446_9 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 400.0
MMD1_k127_344426_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 7.343e-225 703.0
MMD1_k127_344426_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000368 237.0
MMD1_k127_344426_2 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000007408 187.0
MMD1_k127_344426_3 Uncharacterised protein family (UPF0261) - - - 0.00000000000000000000000000000000000000001664 168.0
MMD1_k127_344426_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000003489 118.0
MMD1_k127_344426_6 - - - - 0.00000189 50.0
MMD1_k127_346058_0 PFAM aminotransferase, class I K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 498.0
MMD1_k127_346058_1 ABC transporter K02017,K06857 - 3.6.3.29,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 467.0
MMD1_k127_346058_10 B12 binding domain - - - 0.0000000002598 65.0
MMD1_k127_346058_11 - - - - 0.000005224 55.0
MMD1_k127_346058_2 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 422.0
MMD1_k127_346058_3 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 412.0
MMD1_k127_346058_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 424.0
MMD1_k127_346058_5 TIGRFAM DNA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 382.0
MMD1_k127_346058_6 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 360.0
MMD1_k127_346058_7 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 331.0
MMD1_k127_346058_8 Peptidase family U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 294.0
MMD1_k127_346058_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000007124 179.0
MMD1_k127_350326_0 PFAM formate-tetrahydrofolate ligase FTHFS K01938 - 6.3.4.3 5.606e-318 980.0
MMD1_k127_350326_1 carbon-monoxide dehydrogenase (ferredoxin) activity K00192,K02572,K02573,K14138 - 1.2.7.4,2.3.1.169 8.355e-316 983.0
MMD1_k127_350326_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 458.0
MMD1_k127_350326_3 Pterin binding enzyme K15023 - 2.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 344.0
MMD1_k127_350326_4 CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 323.0
MMD1_k127_350326_5 Staphylopine dehydrogenase K04940 - 1.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000165 275.0
MMD1_k127_350326_6 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336 - 1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001535 248.0
MMD1_k127_350326_7 PFAM CO dehydrogenase beta subunit acetyl-CoA synthase epsilon subunit K00195,K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000212 202.0
MMD1_k127_350326_8 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K00193,K14138 - 2.3.1.169 0.000000000000000000000000000000000000000000000003934 177.0
MMD1_k127_3537614_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 447.0
MMD1_k127_3537614_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000005511 197.0
MMD1_k127_3537614_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000001931 191.0
MMD1_k127_3537614_3 Secondary thiamine-phosphate synthase enzyme - - - 0.0000000000000000000000000000000000000000000000000002805 188.0
MMD1_k127_3537614_4 spore germination K16928 - - 0.000000000000000000000000000000000000000000000000007476 190.0
MMD1_k127_3537614_5 Major facilitator Superfamily - - - 0.0000000000000000000000000000001431 132.0
MMD1_k127_3537614_6 SMART serine threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase K01090 - 3.1.3.16 0.00000000000000000000006187 108.0
MMD1_k127_3545154_0 aconitate hydratase K01681 - 4.2.1.3 7.479e-199 627.0
MMD1_k127_3545154_1 Fumarase C C-terminus K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 562.0
MMD1_k127_3545154_2 PFAM transport-associated - - - 0.000000002785 61.0
MMD1_k127_3546515_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 9.216e-248 782.0
MMD1_k127_3546515_1 PFAM Aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 501.0
MMD1_k127_3546515_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000001263 153.0
MMD1_k127_3606704_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 3.226e-318 984.0
MMD1_k127_3606704_1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009382 602.0
MMD1_k127_3606704_10 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000003813 207.0
MMD1_k127_3606704_11 Receptor family ligand binding region K01999 - - 0.0000000005582 72.0
MMD1_k127_3606704_2 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 560.0
MMD1_k127_3606704_3 PFAM inner-membrane translocator K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 521.0
MMD1_k127_3606704_4 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 473.0
MMD1_k127_3606704_5 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 336.0
MMD1_k127_3606704_6 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 308.0
MMD1_k127_3606704_7 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 306.0
MMD1_k127_3606704_8 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003728 276.0
MMD1_k127_3606704_9 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000003595 224.0
MMD1_k127_3686654_0 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 420.0
MMD1_k127_3686654_1 of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 314.0
MMD1_k127_3686654_2 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000002086 264.0
MMD1_k127_3686654_3 E1 component alpha subunit K00161 - 1.2.4.1 0.0001273 45.0
MMD1_k127_3692594_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.895e-273 861.0
MMD1_k127_3692594_1 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 568.0
MMD1_k127_3692594_10 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 329.0
MMD1_k127_3692594_11 Urea transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 347.0
MMD1_k127_3692594_12 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K02302,K02303,K13542 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000484 261.0
MMD1_k127_3692594_13 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000001064 206.0
MMD1_k127_3692594_14 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.000000000000000000000000000000000000000000000001297 181.0
MMD1_k127_3692594_15 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000005434 153.0
MMD1_k127_3692594_16 PFAM thioesterase superfamily K02614 - - 0.000000000000000000000000000000000000422 145.0
MMD1_k127_3692594_17 - - - - 0.000000000000000000000000000000001901 135.0
MMD1_k127_3692594_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000003914 133.0
MMD1_k127_3692594_19 Thioredoxin-like - - - 0.00000000000000000000000002164 115.0
MMD1_k127_3692594_2 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 510.0
MMD1_k127_3692594_20 PFAM glycine cleavage H-protein - - - 0.00000000000000000000001809 109.0
MMD1_k127_3692594_21 PFAM Excinuclease ABC, C subunit, N-terminal K07461 - - 0.000000000000000004397 86.0
MMD1_k127_3692594_22 Domain of unknown function (DUF4115) - - - 0.00000000000001182 85.0
MMD1_k127_3692594_23 rod shape-determining protein MreD K03571 - - 0.00000004591 61.0
MMD1_k127_3692594_24 Tetratricopeptide repeats - - - 0.0000005351 61.0
MMD1_k127_3692594_25 Belongs to the GarS family - - - 0.0000007482 53.0
MMD1_k127_3692594_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 488.0
MMD1_k127_3692594_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 484.0
MMD1_k127_3692594_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 398.0
MMD1_k127_3692594_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 367.0
MMD1_k127_3692594_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000554 364.0
MMD1_k127_3692594_8 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 336.0
MMD1_k127_3692594_9 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 337.0
MMD1_k127_3694590_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004923 584.0
MMD1_k127_3694590_1 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 355.0
MMD1_k127_3694590_2 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000008395 151.0
MMD1_k127_3694590_3 ThiS family K03636 - - 0.0000000000000000000000000001893 121.0
MMD1_k127_3694590_4 UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000002991 95.0
MMD1_k127_3694590_5 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000001237 81.0
MMD1_k127_3698419_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 6.57e-226 719.0
MMD1_k127_3698419_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 318.0
MMD1_k127_3698419_2 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001506 266.0
MMD1_k127_3698419_3 Peptidase S24-like K03100 - 3.4.21.89 0.000000000000000007569 83.0
MMD1_k127_3698419_4 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000002177 59.0
MMD1_k127_3698419_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000161 57.0
MMD1_k127_3700957_0 PFAM transposase IS4 family protein - - - 0.00000000000000000000004033 113.0
MMD1_k127_3714888_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.472e-302 940.0
MMD1_k127_3714888_1 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 477.0
MMD1_k127_3714888_10 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000000000000001215 209.0
MMD1_k127_3714888_11 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000006233 198.0
MMD1_k127_3714888_12 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000005565 178.0
MMD1_k127_3714888_13 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000009999 147.0
MMD1_k127_3714888_14 Ribbon-helix-helix protein, copG family - - - 0.00000000000000001369 85.0
MMD1_k127_3714888_15 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191 - - 0.0000000000001384 77.0
MMD1_k127_3714888_2 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 438.0
MMD1_k127_3714888_3 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 376.0
MMD1_k127_3714888_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 385.0
MMD1_k127_3714888_5 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 357.0
MMD1_k127_3714888_6 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009368 278.0
MMD1_k127_3714888_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000004378 234.0
MMD1_k127_3714888_8 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000000000002665 217.0
MMD1_k127_3714888_9 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000001506 206.0
MMD1_k127_3728469_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 7.114e-219 691.0
MMD1_k127_3728469_1 Belongs to the glycosyl hydrolase 57 family - - - 1.023e-211 685.0
MMD1_k127_3728469_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 560.0
MMD1_k127_3728469_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 416.0
MMD1_k127_3728469_4 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 343.0
MMD1_k127_3728469_5 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 317.0
MMD1_k127_3728469_6 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 303.0
MMD1_k127_3728469_7 4Fe-4S single cluster domain - - - 0.000000000004931 67.0
MMD1_k127_3728469_8 Transcriptional regulator - - - 0.00001774 47.0
MMD1_k127_3728469_9 CBS domain K07182 - - 0.00003278 52.0
MMD1_k127_3733895_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000004043 224.0
MMD1_k127_3733895_1 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000004709 198.0
MMD1_k127_3733895_2 Helix-turn-helix domain - - - 0.00001448 49.0
MMD1_k127_3734087_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 338.0
MMD1_k127_3734087_1 PFAM transport-associated - - - 0.00000000000000000000000000000000000000000000001035 181.0
MMD1_k127_3734087_2 PFAM AAA ATPase central domain protein K06027 - 3.6.4.6 0.00000000000000251 80.0
MMD1_k127_3741612_0 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 535.0
MMD1_k127_3741612_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004996 280.0
MMD1_k127_3741612_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001885 245.0
MMD1_k127_3743871_0 AMP-binding enzyme K01897 - 6.2.1.3 3.712e-215 685.0
MMD1_k127_3743871_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 507.0
MMD1_k127_3743871_10 Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c - GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.0000000000000000000000000001421 121.0
MMD1_k127_3743871_12 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000854 124.0
MMD1_k127_3743871_13 lipoprotein involved in nitrous oxide reduction K21601 - - 0.0000000000000000000004243 101.0
MMD1_k127_3743871_14 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000002168 81.0
MMD1_k127_3743871_15 - - - - 0.00000000000001073 87.0
MMD1_k127_3743871_17 ABC transporter substrate-binding protein K15551 - - 0.00000003395 66.0
MMD1_k127_3743871_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 469.0
MMD1_k127_3743871_3 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 356.0
MMD1_k127_3743871_4 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 340.0
MMD1_k127_3743871_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 323.0
MMD1_k127_3743871_6 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 312.0
MMD1_k127_3743871_7 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002069 259.0
MMD1_k127_3743871_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000155 245.0
MMD1_k127_3743871_9 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01995 - - 0.000000000000000000000000000000000000000000000000000000000000007789 224.0
MMD1_k127_3764266_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 1.628e-219 685.0
MMD1_k127_3764266_1 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005256 254.0
MMD1_k127_3795413_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 3.55e-209 673.0
MMD1_k127_3795413_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.146e-207 656.0
MMD1_k127_3795413_10 peptidase dimerisation domain protein K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 380.0
MMD1_k127_3795413_11 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 342.0
MMD1_k127_3795413_12 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 311.0
MMD1_k127_3795413_13 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000002705 269.0
MMD1_k127_3795413_14 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519,K13479 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000952 240.0
MMD1_k127_3795413_15 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000004939 235.0
MMD1_k127_3795413_16 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000966 201.0
MMD1_k127_3795413_17 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000003379 195.0
MMD1_k127_3795413_18 MFS transporter - - - 0.00000000000000000000000000000000000000000003208 173.0
MMD1_k127_3795413_19 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.00000000000000000000000000000000000000008747 154.0
MMD1_k127_3795413_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 8.487e-198 641.0
MMD1_k127_3795413_20 pyridine nucleotide-disulphide oxidoreductase dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000001559 152.0
MMD1_k127_3795413_21 ParB-like nuclease domain - - - 0.00000000000000000000000000000001447 132.0
MMD1_k127_3795413_22 Domain of unknown function (DUF5058) - - - 0.00000000000000000000000000003389 125.0
MMD1_k127_3795413_23 ACT domain - - - 0.0000000000000000000000000002157 122.0
MMD1_k127_3795413_24 Tripartite tricarboxylate transporter TctB family - - - 0.0000000002551 67.0
MMD1_k127_3795413_25 Tautomerase enzyme K01821 - 5.3.2.6 0.00000001572 58.0
MMD1_k127_3795413_3 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 614.0
MMD1_k127_3795413_4 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 601.0
MMD1_k127_3795413_5 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 587.0
MMD1_k127_3795413_6 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 499.0
MMD1_k127_3795413_7 4fe-4S ferredoxin, iron-sulfur binding domain protein K00244,K20449 - 1.3.5.4,1.3.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 479.0
MMD1_k127_3795413_8 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 456.0
MMD1_k127_3795413_9 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 448.0
MMD1_k127_3801431_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 7.342e-196 617.0
MMD1_k127_3801431_1 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 572.0
MMD1_k127_3801431_10 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000001049 130.0
MMD1_k127_3801431_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000005611 111.0
MMD1_k127_3801431_12 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000008089 96.0
MMD1_k127_3801431_13 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.0000000000005268 71.0
MMD1_k127_3801431_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 404.0
MMD1_k127_3801431_3 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 386.0
MMD1_k127_3801431_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 379.0
MMD1_k127_3801431_5 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 304.0
MMD1_k127_3801431_6 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000004282 256.0
MMD1_k127_3801431_7 Lumazine binding domain K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000005069 228.0
MMD1_k127_3801431_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000002658 214.0
MMD1_k127_3801431_9 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000001203 198.0
MMD1_k127_3802123_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 3.123e-265 830.0
MMD1_k127_3802123_1 Cytidylate kinase K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
MMD1_k127_3802123_2 phosphate transport regulator (Distant homolog of PhoU) K07220 - - 0.0000000000000000000000000000000000000000000001265 175.0
MMD1_k127_3802123_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000003655 141.0
MMD1_k127_3802123_4 PIN domain - - - 0.00000000000000000000000001012 113.0
MMD1_k127_3802123_5 hydrolase - - - 0.000000000000000001433 98.0
MMD1_k127_3802123_6 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000003837 69.0
MMD1_k127_3872298_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1675.0
MMD1_k127_3872298_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 527.0
MMD1_k127_3872298_10 PFAM Oxidoreductase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002464 244.0
MMD1_k127_3872298_11 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008921 258.0
MMD1_k127_3872298_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000005016 221.0
MMD1_k127_3872298_13 PFAM Rhomboid family protein - - - 0.0000000000000000000000000000000000000000000000000003695 192.0
MMD1_k127_3872298_14 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000003171 188.0
MMD1_k127_3872298_15 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000005951 188.0
MMD1_k127_3872298_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000003071 108.0
MMD1_k127_3872298_17 - - - - 0.0000000000000000000004396 109.0
MMD1_k127_3872298_18 4Fe-4S binding domain - - - 0.00000000000000006333 83.0
MMD1_k127_3872298_19 ATP-independent chaperone mediated protein folding K07803 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0008270,GO:0016151,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050897 - 0.00000000000001009 80.0
MMD1_k127_3872298_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 477.0
MMD1_k127_3872298_20 ATP-independent chaperone mediated protein folding K07803 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0008270,GO:0016151,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050897 - 0.0000001609 59.0
MMD1_k127_3872298_21 Domain of Unknown Function (DUF748) - - - 0.00001497 57.0
MMD1_k127_3872298_3 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 383.0
MMD1_k127_3872298_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 363.0
MMD1_k127_3872298_5 PFAM Prokaryotic protein of K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 346.0
MMD1_k127_3872298_6 Ribosomal protein S2 K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 342.0
MMD1_k127_3872298_7 Alpha/beta hydrolase family K16050 - 3.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 308.0
MMD1_k127_3872298_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 286.0
MMD1_k127_3872298_9 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002811 254.0
MMD1_k127_3905589_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 299.0
MMD1_k127_3905589_1 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000008209 226.0
MMD1_k127_3905589_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000013 151.0
MMD1_k127_3905589_3 OmpA family - - - 0.000000000000000000009023 103.0
MMD1_k127_3951578_0 Valyl tRNA synthetase tRNA binding arm K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 4.673e-312 967.0
MMD1_k127_3951578_1 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 439.0
MMD1_k127_3951578_2 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000004295 123.0
MMD1_k127_3951578_3 Psort location CytoplasmicMembrane, score - - - 0.000002883 60.0
MMD1_k127_399461_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 8.138e-252 788.0
MMD1_k127_399461_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 6.099e-236 744.0
MMD1_k127_399461_10 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000006975 273.0
MMD1_k127_399461_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002059 259.0
MMD1_k127_399461_12 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000002297 236.0
MMD1_k127_399461_13 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000000000000000000000000000000000000001368 232.0
MMD1_k127_399461_14 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000002707 210.0
MMD1_k127_399461_15 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000001996 202.0
MMD1_k127_399461_16 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000000000000000000000000103 156.0
MMD1_k127_399461_17 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000005328 139.0
MMD1_k127_399461_18 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000000000000000000000000000000008739 133.0
MMD1_k127_399461_2 Aldehyde dehydrogenase family K22187 - - 3.546e-201 638.0
MMD1_k127_399461_20 Endonuclease containing a URI domain - - - 0.000004035 51.0
MMD1_k127_399461_21 Helix-turn-helix domain - - - 0.0001057 49.0
MMD1_k127_399461_22 Protein of unknown function (DUF465) K09794 - - 0.0002799 46.0
MMD1_k127_399461_3 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 1.055e-199 635.0
MMD1_k127_399461_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 517.0
MMD1_k127_399461_5 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 435.0
MMD1_k127_399461_6 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 424.0
MMD1_k127_399461_7 UDP-3-O-acyl N-acetylglycosamine deacetylase K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 413.0
MMD1_k127_399461_8 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 398.0
MMD1_k127_399461_9 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 395.0
MMD1_k127_4013532_0 Alginate O-acetylation protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 552.0
MMD1_k127_4013532_1 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 549.0
MMD1_k127_4013532_10 Thioesterase superfamily - - - 0.00000000000000000000000000001112 122.0
MMD1_k127_4013532_12 energy transducer activity K03832,K08086 - - 0.000000000000000000000002421 113.0
MMD1_k127_4013532_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000002416 67.0
MMD1_k127_4013532_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 360.0
MMD1_k127_4013532_3 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 288.0
MMD1_k127_4013532_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000001755 263.0
MMD1_k127_4013532_5 protein trimerization - - - 0.0000000000000000000000000000000000000000000000000000000000000000002369 260.0
MMD1_k127_4013532_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000006239 227.0
MMD1_k127_4013532_7 PIN domain - - - 0.000000000000000000000000000000000000000000000009363 175.0
MMD1_k127_4013532_8 COG0859 ADP-heptose LPS heptosyltransferase K02841,K02849 - - 0.0000000000000000000000000000000001429 137.0
MMD1_k127_4013532_9 Thioesterase superfamily K07107 - - 0.0000000000000000000000000000002184 127.0
MMD1_k127_4029106_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.284e-285 900.0
MMD1_k127_4029106_1 Semialdehyde dehydrogenase, NAD binding domain K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 360.0
MMD1_k127_4029106_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 297.0
MMD1_k127_4029106_3 heme binding - - - 0.00000000000000000000000000000000000000000002241 169.0
MMD1_k127_4029106_4 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000000000000001647 151.0
MMD1_k127_4036866_0 Large extracellular alpha-helical protein K06894 - - 0.0 2125.0
MMD1_k127_4036866_1 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 2.621e-207 666.0
MMD1_k127_4036866_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 256.0
MMD1_k127_4036866_3 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000001103 160.0
MMD1_k127_4036866_4 alpha-ribazole phosphatase activity K01834,K15634,K22306 - 3.1.3.85,5.4.2.11,5.4.2.12 0.00000000000000000000000000000000000001187 152.0
MMD1_k127_4036866_5 Thioredoxin-like - - - 0.000000001409 60.0
MMD1_k127_403933_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 604.0
MMD1_k127_403933_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 461.0
MMD1_k127_403933_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 409.0
MMD1_k127_4117480_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 527.0
MMD1_k127_4117480_1 PFAM response regulator receiver - - - 0.000000001015 62.0
MMD1_k127_4117480_2 amine dehydrogenase activity - - - 0.000002095 56.0
MMD1_k127_4128288_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 297.0
MMD1_k127_4128288_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000001262 236.0
MMD1_k127_4128288_2 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000001144 112.0
MMD1_k127_4128288_3 Metallo-beta-lactamase superfamily - - - 0.00000000000261 68.0
MMD1_k127_4128288_4 HEAT repeat - - - 0.000000001533 68.0
MMD1_k127_4128288_6 - - - - 0.00004455 53.0
MMD1_k127_4128288_7 Domain of unknown function (DUF4124) - - - 0.000417 49.0
MMD1_k127_4173554_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 442.0
MMD1_k127_4173554_1 tigr00255 - - - 0.000000000000000000000000000000000000000000000000000000000000001215 230.0
MMD1_k127_4173554_10 formylmethanofuran dehydrogenase subunit C K00202 - 1.2.7.12 0.00000007518 63.0
MMD1_k127_4173554_11 - - - - 0.0000001141 58.0
MMD1_k127_4173554_14 Domain of unknown function (DUF4124) - - - 0.0006717 49.0
MMD1_k127_4173554_2 ATPase associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000186 226.0
MMD1_k127_4173554_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000002018 201.0
MMD1_k127_4173554_4 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000002 198.0
MMD1_k127_4173554_5 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000000000000000000000000000000001393 190.0
MMD1_k127_4173554_6 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000003418 104.0
MMD1_k127_4173554_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000004089 80.0
MMD1_k127_4173554_8 von Willebrand factor (vWF) type A domain - - - 0.00000000000005543 85.0
MMD1_k127_4173554_9 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000002177 59.0
MMD1_k127_4361451_0 Alpha amylase, catalytic domain - - - 0.0 1429.0
MMD1_k127_4361451_1 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 575.0
MMD1_k127_4361451_10 Organic solvent tolerance protein K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 339.0
MMD1_k127_4361451_11 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 287.0
MMD1_k127_4361451_12 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004258 285.0
MMD1_k127_4361451_13 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000002298 269.0
MMD1_k127_4361451_14 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000001544 242.0
MMD1_k127_4361451_15 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.000000000000000000000000000000000000000000000000000000001267 210.0
MMD1_k127_4361451_16 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000002314 176.0
MMD1_k127_4361451_17 Calcineurin-like phosphoesterase superfamily domain K03269 - 3.6.1.54 0.000000000000000000000000000002932 125.0
MMD1_k127_4361451_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 488.0
MMD1_k127_4361451_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 474.0
MMD1_k127_4361451_4 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 412.0
MMD1_k127_4361451_5 Electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000952 403.0
MMD1_k127_4361451_6 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 375.0
MMD1_k127_4361451_7 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 381.0
MMD1_k127_4361451_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 352.0
MMD1_k127_4361451_9 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 340.0
MMD1_k127_436172_0 nitrite reductase (NAD(P)H) large subunit K00362 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 366.0
MMD1_k127_436172_1 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 367.0
MMD1_k127_436172_10 Protein of unknown function (DUF1018) - - - 0.0008164 48.0
MMD1_k127_436172_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000008122 233.0
MMD1_k127_436172_3 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001052 236.0
MMD1_k127_436172_4 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001493 214.0
MMD1_k127_436172_5 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.000000000000000000000000000000000025 136.0
MMD1_k127_436172_6 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000004021 135.0
MMD1_k127_436172_7 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000002245 134.0
MMD1_k127_436172_8 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000386 126.0
MMD1_k127_436172_9 DNA-sulfur modification-associated - - - 0.0000000000000000001164 101.0
MMD1_k127_4387306_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 592.0
MMD1_k127_4387306_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 491.0
MMD1_k127_4387306_2 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 333.0
MMD1_k127_4387306_4 AhpC/TSA family K03564 - 1.11.1.15 0.0000000000000000000000000000000000001288 143.0
MMD1_k127_4387306_5 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000002155 140.0
MMD1_k127_4387306_6 - - - - 0.00000000000004755 80.0
MMD1_k127_4414374_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 352.0
MMD1_k127_4414374_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 307.0
MMD1_k127_4414374_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005396 252.0
MMD1_k127_4414374_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000008754 195.0
MMD1_k127_4431192_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 548.0
MMD1_k127_4431192_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 457.0
MMD1_k127_4431192_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000232 189.0
MMD1_k127_4431192_3 PAC2 family - - - 0.00000000000000000000000000000000000009382 153.0
MMD1_k127_4431192_4 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000001641 119.0
MMD1_k127_4433433_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 2.366e-198 627.0
MMD1_k127_4433433_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 7.187e-194 612.0
MMD1_k127_4433433_10 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 356.0
MMD1_k127_4433433_11 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 341.0
MMD1_k127_4433433_12 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000356 252.0
MMD1_k127_4433433_13 Serine aminopeptidase, S33 K06889,K07397 - - 0.00000000000000000000000000000000000000000007075 169.0
MMD1_k127_4433433_14 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000007767 161.0
MMD1_k127_4433433_15 Essential cell division protein K03589 - - 0.0000000000000000000000000000000000007324 149.0
MMD1_k127_4433433_17 NAD+ diphosphatase activity K01515,K03426 - 3.6.1.13,3.6.1.22 0.00000002322 66.0
MMD1_k127_4433433_18 Sh3 type 3 domain protein K01447,K09774 - 3.5.1.28 0.00000009712 63.0
MMD1_k127_4433433_19 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.0000005342 57.0
MMD1_k127_4433433_2 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 615.0
MMD1_k127_4433433_3 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 553.0
MMD1_k127_4433433_4 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 481.0
MMD1_k127_4433433_5 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 481.0
MMD1_k127_4433433_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 474.0
MMD1_k127_4433433_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 435.0
MMD1_k127_4433433_8 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 378.0
MMD1_k127_4433433_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 376.0
MMD1_k127_4438087_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 435.0
MMD1_k127_4438087_1 BadF BadG BcrA BcrD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 407.0
MMD1_k127_4438087_10 Molybdopterin guanine dinucleotide synthesis protein B K03753,K13818 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000141 219.0
MMD1_k127_4438087_11 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000796 212.0
MMD1_k127_4438087_12 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.0000000000000000000000000000000000000000000137 171.0
MMD1_k127_4438087_13 Domain of unknown function (DUF3842) - - - 0.000000000000000000000000000000000000000002062 162.0
MMD1_k127_4438087_14 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000008047 153.0
MMD1_k127_4438087_15 Membrane - - - 0.0000000000000000000000000000000000001627 151.0
MMD1_k127_4438087_16 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000000000000000001966 140.0
MMD1_k127_4438087_17 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.00000000000000000000000000002153 119.0
MMD1_k127_4438087_18 Predicted RNA-binding protein - - - 0.000000000000000006561 85.0
MMD1_k127_4438087_19 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000001864 87.0
MMD1_k127_4438087_2 tungstate binding K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 361.0
MMD1_k127_4438087_20 PDGLE domain K02009 - - 0.00000000000000003479 93.0
MMD1_k127_4438087_21 - - - - 0.00000000004075 66.0
MMD1_k127_4438087_22 transglycosylase K08307 - - 0.0000001062 55.0
MMD1_k127_4438087_3 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 357.0
MMD1_k127_4438087_4 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 310.0
MMD1_k127_4438087_5 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002126 274.0
MMD1_k127_4438087_6 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000025 266.0
MMD1_k127_4438087_7 molybdate abc transporter K02018,K15496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002928 252.0
MMD1_k127_4438087_8 ATPase activity K02017,K15497 - 3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000001964 254.0
MMD1_k127_4438087_9 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000000000000000000000000000000000000000000000000002663 226.0
MMD1_k127_4458645_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 0.0 1034.0
MMD1_k127_4458645_1 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 3.673e-271 858.0
MMD1_k127_4458645_10 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 341.0
MMD1_k127_4458645_11 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003774 288.0
MMD1_k127_4458645_12 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000004601 224.0
MMD1_k127_4458645_13 Phosphoglycerate mutase family K22305 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000008106 225.0
MMD1_k127_4458645_14 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000001861 220.0
MMD1_k127_4458645_15 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000004041 196.0
MMD1_k127_4458645_16 PFAM formylmethanofuran dehydrogenase subunit E region K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000004137 203.0
MMD1_k127_4458645_17 RNA methyltransferase K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000004941 179.0
MMD1_k127_4458645_19 pilus assembly protein major pilin PilA K02650,K02655 - - 0.0000000001273 68.0
MMD1_k127_4458645_2 Belongs to the ClpX chaperone family - - - 6.043e-213 677.0
MMD1_k127_4458645_21 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000002071 58.0
MMD1_k127_4458645_22 SNARE associated Golgi protein - - - 0.000003583 49.0
MMD1_k127_4458645_3 PFAM aldo keto reductase K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 499.0
MMD1_k127_4458645_4 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 491.0
MMD1_k127_4458645_5 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 443.0
MMD1_k127_4458645_6 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 430.0
MMD1_k127_4458645_7 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 362.0
MMD1_k127_4458645_8 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 362.0
MMD1_k127_4458645_9 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 353.0
MMD1_k127_4461881_0 Glutamine amidotransferase domain K00764 - 2.4.2.14 1.849e-246 766.0
MMD1_k127_4461881_1 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 554.0
MMD1_k127_4461881_10 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000002418 181.0
MMD1_k127_4461881_11 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000003983 168.0
MMD1_k127_4461881_12 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000002754 156.0
MMD1_k127_4461881_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000001126 157.0
MMD1_k127_4461881_14 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.1.1.63 0.000000000000000000000000000000000000009025 151.0
MMD1_k127_4461881_15 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000001038 139.0
MMD1_k127_4461881_16 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000009144 122.0
MMD1_k127_4461881_17 Thioesterase - - - 0.0000000000000000000000000007772 117.0
MMD1_k127_4461881_18 PFAM Rubrerythrin - - - 0.000000000000000000000001949 108.0
MMD1_k127_4461881_19 aspartic-type endopeptidase activity K06985 - - 0.00000000000000000001373 103.0
MMD1_k127_4461881_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 548.0
MMD1_k127_4461881_20 Acetyltransferase K03789 - 2.3.1.128 0.00000000000000003631 88.0
MMD1_k127_4461881_21 Putative transmembrane protein (PGPGW) - - - 0.000000000000129 73.0
MMD1_k127_4461881_22 - - - - 0.00000000001501 71.0
MMD1_k127_4461881_23 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate - - - 0.0000000006331 68.0
MMD1_k127_4461881_26 Protein of unknown function (DUF2723) - - - 0.00007283 48.0
MMD1_k127_4461881_3 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 409.0
MMD1_k127_4461881_4 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 333.0
MMD1_k127_4461881_5 COG0191 Fructose tagatose bisphosphate aldolase K01624,K08302 - 4.1.2.13,4.1.2.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 312.0
MMD1_k127_4461881_6 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001996 274.0
MMD1_k127_4461881_7 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005263 246.0
MMD1_k127_4461881_8 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000009401 220.0
MMD1_k127_4461881_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000004773 211.0
MMD1_k127_4486069_0 denitrification pathway - - - 4.371e-225 715.0
MMD1_k127_4486069_1 5'-nucleotidase - - - 0.000000000000000000000000000000000000004268 163.0
MMD1_k127_4486069_2 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000002332 151.0
MMD1_k127_4486069_3 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000001574 111.0
MMD1_k127_4486069_4 ABC transporter K06158 - - 0.0000000000756 66.0
MMD1_k127_4486069_5 Regulatory protein, FmdB - - - 0.00006021 50.0
MMD1_k127_4505943_0 Protein of unknown function, DUF255 K06888 - - 3.207e-220 705.0
MMD1_k127_4505943_1 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 323.0
MMD1_k127_4505943_10 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000000000000000000000000000000004171 164.0
MMD1_k127_4505943_11 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000002585 126.0
MMD1_k127_4505943_12 Belongs to the Fur family K03711 - - 0.00000000000000000000002607 104.0
MMD1_k127_4505943_13 Universal stress protein family - - - 0.0000000000000000000172 96.0
MMD1_k127_4505943_14 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.0000000000000000004564 87.0
MMD1_k127_4505943_16 Cobalt transport protein K02008 - - 0.000006047 57.0
MMD1_k127_4505943_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 302.0
MMD1_k127_4505943_3 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 295.0
MMD1_k127_4505943_4 ATPases associated with a variety of cellular activities K02006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003495 288.0
MMD1_k127_4505943_5 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001355 263.0
MMD1_k127_4505943_6 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000001993 226.0
MMD1_k127_4505943_7 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000005557 212.0
MMD1_k127_4505943_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000002149 203.0
MMD1_k127_4505943_9 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000002785 198.0
MMD1_k127_4506839_0 von Willebrand factor, type A K07114 - - 8.691e-309 964.0
MMD1_k127_4506839_1 CoA-transferase family III - - - 7.297e-200 629.0
MMD1_k127_4506839_11 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000002815 125.0
MMD1_k127_4506839_12 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000127 122.0
MMD1_k127_4506839_14 Transcriptional regulatory protein, C terminal K02483,K07658,K07668 - - 0.000000000000000000000003008 117.0
MMD1_k127_4506839_15 Response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000006891 99.0
MMD1_k127_4506839_16 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07714 - - 0.0000000000000000005479 93.0
MMD1_k127_4506839_18 PHP domain protein - - - 0.0000008099 59.0
MMD1_k127_4506839_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 412.0
MMD1_k127_4506839_3 Two component signalling adaptor domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 428.0
MMD1_k127_4506839_4 acetyltransferase K19113 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 314.0
MMD1_k127_4506839_5 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 304.0
MMD1_k127_4506839_6 Protein of unknown function DUF89 K09116 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
MMD1_k127_4506839_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004825 284.0
MMD1_k127_4506839_8 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000003155 248.0
MMD1_k127_4506839_9 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000002065 231.0
MMD1_k127_4511752_0 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 382.0
MMD1_k127_4511752_1 Sugar-transfer associated ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 323.0
MMD1_k127_4511752_2 Radical_SAM C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 299.0
MMD1_k127_4511752_3 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000000000000000001079 245.0
MMD1_k127_4511752_4 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.0000000000000000000000000000000000000000000000000000000000000001309 240.0
MMD1_k127_4511752_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000003981 195.0
MMD1_k127_4511752_6 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000001178 186.0
MMD1_k127_4511752_7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000005977 118.0
MMD1_k127_4511752_8 Rhodanese Homology Domain - - - 0.000000000000000000000005438 102.0
MMD1_k127_4511752_9 electron transfer activity K00428 - 1.11.1.5 0.00000000000000000000005749 102.0
MMD1_k127_4526090_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.628e-208 669.0
MMD1_k127_4526090_1 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 514.0
MMD1_k127_4526090_10 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 - 2.3.1.241,2.3.1.265 0.00000000000000000000000000000000000000000000000000000000000000000007148 241.0
MMD1_k127_4526090_11 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000159 233.0
MMD1_k127_4526090_12 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000000000000000000000000000000000000000000000000000000000001929 224.0
MMD1_k127_4526090_13 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000002562 209.0
MMD1_k127_4526090_14 [acyl-carrier-protein] S-malonyltransferase activity - - - 0.00000000000000000000000000000000000009476 154.0
MMD1_k127_4526090_15 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000001858 141.0
MMD1_k127_4526090_16 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000702 109.0
MMD1_k127_4526090_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000006376 71.0
MMD1_k127_4526090_18 Xylose isomerase-like TIM barrel - - - 0.00003714 49.0
MMD1_k127_4526090_2 B12 binding domain K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 483.0
MMD1_k127_4526090_3 PFAM ATPase BadF BadG BcrA BcrD type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 389.0
MMD1_k127_4526090_4 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 392.0
MMD1_k127_4526090_5 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 379.0
MMD1_k127_4526090_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 361.0
MMD1_k127_4526090_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 291.0
MMD1_k127_4526090_8 PFAM CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001283 269.0
MMD1_k127_4526090_9 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000003236 238.0
MMD1_k127_4535191_0 AMP-binding enzyme C-terminal domain - - - 8.18e-288 890.0
MMD1_k127_4535191_1 Cys/Met metabolism PLP-dependent enzyme K01758,K01761 - 4.4.1.1,4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 546.0
MMD1_k127_4535191_2 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000002132 143.0
MMD1_k127_4577411_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.117e-249 788.0
MMD1_k127_4577411_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001065 275.0
MMD1_k127_4577411_2 transcription regulator activity K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000004277 164.0
MMD1_k127_4577411_3 cell division protein FtsL - - - 0.000008247 51.0
MMD1_k127_4615572_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 9.64e-227 711.0
MMD1_k127_4615572_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 496.0
MMD1_k127_4615572_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 400.0
MMD1_k127_4615572_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006423 305.0
MMD1_k127_4615572_4 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000505 207.0
MMD1_k127_4615572_5 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000003688 117.0
MMD1_k127_4615572_6 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000001558 104.0
MMD1_k127_4615572_7 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000002709 57.0
MMD1_k127_4615572_8 Protein of unknown function (DUF1059) - - - 0.000004904 51.0
MMD1_k127_4622092_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1124.0
MMD1_k127_4622092_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 5.535e-286 897.0
MMD1_k127_4622092_10 peroxiredoxin activity K01607 - 4.1.1.44 0.0000002232 55.0
MMD1_k127_4622092_2 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008184 245.0
MMD1_k127_4622092_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124,K07307 - - 0.000000000000000000000000000000000000000000000000009522 185.0
MMD1_k127_4622092_4 - - - - 0.00000000000000000000000000000000000000000000000003903 184.0
MMD1_k127_4622092_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000001598 173.0
MMD1_k127_4622092_6 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000002756 168.0
MMD1_k127_4622092_7 - - - - 0.0000000000000000000000000009526 118.0
MMD1_k127_4622092_8 Sigma-70, region 4 K03088 - - 0.000000000000000000000001134 111.0
MMD1_k127_4622092_9 - - - - 0.0000000000000000006509 94.0
MMD1_k127_4675682_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1036.0
MMD1_k127_4675682_1 Heat shock 70 kDa protein K04043 - - 3.553e-314 972.0
MMD1_k127_4675682_10 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000004927 219.0
MMD1_k127_4675682_11 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000002246 192.0
MMD1_k127_4675682_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000001753 171.0
MMD1_k127_4675682_13 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000006259 158.0
MMD1_k127_4675682_14 AhpC/TSA family - - - 0.0000000000000000000001166 100.0
MMD1_k127_4675682_15 AhpC/TSA family - - - 0.00000000000000000005605 93.0
MMD1_k127_4675682_16 Hydrogenase maturation protease K03605 - - 0.0000000002233 61.0
MMD1_k127_4675682_2 PFAM Nickel-dependent hydrogenase, large subunit K06281 - 1.12.99.6 2.768e-203 642.0
MMD1_k127_4675682_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006593 606.0
MMD1_k127_4675682_4 small subunit K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 372.0
MMD1_k127_4675682_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 367.0
MMD1_k127_4675682_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 351.0
MMD1_k127_4675682_7 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 331.0
MMD1_k127_4675682_8 thiamine-phosphate kinase activity K00946,K07123 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000006688 260.0
MMD1_k127_4675682_9 PFAM Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000009096 231.0
MMD1_k127_4685817_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 415.0
MMD1_k127_4685817_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 401.0
MMD1_k127_4685817_10 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00189 - 1.2.7.1,1.2.7.7 0.00000000000000000000000000000000000000000001538 168.0
MMD1_k127_4685817_11 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00000000000001544 79.0
MMD1_k127_4685817_12 Domain of unknown function (DUF4388) - - - 0.00000000009201 72.0
MMD1_k127_4685817_2 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 388.0
MMD1_k127_4685817_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 354.0
MMD1_k127_4685817_4 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 341.0
MMD1_k127_4685817_5 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 312.0
MMD1_k127_4685817_6 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 311.0
MMD1_k127_4685817_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001188 283.0
MMD1_k127_4685817_8 Regulatory protein GntR HTH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008536 249.0
MMD1_k127_4685817_9 transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000155 227.0
MMD1_k127_4690666_0 PFAM Pyruvate carboxyltransferase - - - 2.648e-281 874.0
MMD1_k127_4690666_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.661e-239 754.0
MMD1_k127_4690666_10 GAF domain - - - 0.00000000000000000000000000000000000000000000000000003499 211.0
MMD1_k127_4690666_11 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000001522 177.0
MMD1_k127_4690666_13 - - - - 0.000000000000000000000000007338 111.0
MMD1_k127_4690666_14 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000001513 123.0
MMD1_k127_4690666_15 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000000000000000007467 102.0
MMD1_k127_4690666_16 Uncharacterized conserved protein (DUF2249) - - - 0.0000000000000000000001546 101.0
MMD1_k127_4690666_17 Domain of unknown function (DUF1858) - - - 0.000000000000000000000589 96.0
MMD1_k127_4690666_18 - - - - 0.0000000000000000005499 91.0
MMD1_k127_4690666_19 Cupin domain - - - 0.000000000003032 71.0
MMD1_k127_4690666_2 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 490.0
MMD1_k127_4690666_20 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000002863 62.0
MMD1_k127_4690666_3 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 462.0
MMD1_k127_4690666_4 Bacterial regulatory protein, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 395.0
MMD1_k127_4690666_5 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 287.0
MMD1_k127_4690666_6 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000001253 226.0
MMD1_k127_4690666_7 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002928 220.0
MMD1_k127_4690666_8 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000001678 218.0
MMD1_k127_4690666_9 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002896 210.0
MMD1_k127_4749369_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 453.0
MMD1_k127_4749369_1 tagaturonate epimerase K21619 - 5.1.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 376.0
MMD1_k127_4749369_2 PFAM Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 303.0
MMD1_k127_4749369_3 COG1082 Sugar phosphate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001079 249.0
MMD1_k127_4749369_4 HD domain - - - 0.0000000000000000000000000000000000000000508 163.0
MMD1_k127_4749369_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000001289 123.0
MMD1_k127_4749369_6 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000003881 117.0
MMD1_k127_4749369_7 Glycosyl transferase, family 2 - - - 0.0000000000000000009257 98.0
MMD1_k127_4749369_8 Prokaryotic N-terminal methylation motif K02672 - - 0.000005085 57.0
MMD1_k127_4749369_9 type IV pilus modification protein PilV K02458,K02671 - - 0.0004084 48.0
MMD1_k127_4771201_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 591.0
MMD1_k127_4771201_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000001307 252.0
MMD1_k127_4771201_2 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000000004509 154.0
MMD1_k127_4771201_3 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000005524 149.0
MMD1_k127_4771201_4 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000005569 128.0
MMD1_k127_4771201_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000002958 122.0
MMD1_k127_4771201_6 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000001643 109.0
MMD1_k127_4771201_7 PFAM single-strand binding protein Primosomal replication protein n K03111 - - 0.00000001959 63.0
MMD1_k127_4775338_0 Peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 535.0
MMD1_k127_4775338_1 phosphorelay signal transduction system K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 430.0
MMD1_k127_4775338_10 Glycogen recognition site of AMP-activated protein kinase - - - 0.0000000000000000000008535 97.0
MMD1_k127_4775338_12 prohibitin homologues - - - 0.000000001309 62.0
MMD1_k127_4775338_13 PFAM GGDEF domain containing protein - - - 0.000004083 57.0
MMD1_k127_4775338_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 396.0
MMD1_k127_4775338_3 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 379.0
MMD1_k127_4775338_4 TGS domain K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 301.0
MMD1_k127_4775338_5 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000211 280.0
MMD1_k127_4775338_6 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000008253 172.0
MMD1_k127_4775338_7 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000002733 149.0
MMD1_k127_4775338_8 - - - - 0.0000000000000000000000002129 117.0
MMD1_k127_4775338_9 - - - - 0.00000000000000000000007225 104.0
MMD1_k127_4786026_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 554.0
MMD1_k127_4786026_1 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 518.0
MMD1_k127_4786026_2 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 494.0
MMD1_k127_4786026_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 312.0
MMD1_k127_4786026_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000005035 244.0
MMD1_k127_4786026_5 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000008088 138.0
MMD1_k127_4786026_6 KH domain K06960 - - 0.00000000000000000000000000001788 119.0
MMD1_k127_4786026_7 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000001872 123.0
MMD1_k127_4786026_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000009194 106.0
MMD1_k127_4796377_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000001917 171.0
MMD1_k127_4796377_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000003713 168.0
MMD1_k127_4796377_2 Membrane - - - 0.000000000007809 78.0
MMD1_k127_4796377_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000422 76.0
MMD1_k127_4796377_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000005586 59.0
MMD1_k127_4798944_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 6.523e-217 700.0
MMD1_k127_4798944_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 463.0
MMD1_k127_4798944_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001409 141.0
MMD1_k127_4798944_11 lysyltransferase activity K07027 - - 0.000000000000000000000001897 115.0
MMD1_k127_4798944_12 - - - - 0.000000000000000000004151 94.0
MMD1_k127_4798944_14 Domain of unknown function (DUF4349) - - - 0.0001575 53.0
MMD1_k127_4798944_2 NlpC/P60 family K19223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003056 274.0
MMD1_k127_4798944_3 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000006708 256.0
MMD1_k127_4798944_4 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008895 261.0
MMD1_k127_4798944_5 Part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001236 247.0
MMD1_k127_4798944_6 DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000002782 197.0
MMD1_k127_4798944_7 Cobalt ABC transporter K02008 - - 0.0000000000000000000000000000000000000000008444 166.0
MMD1_k127_4798944_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000007588 157.0
MMD1_k127_4798944_9 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000003899 152.0
MMD1_k127_4818837_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 482.0
MMD1_k127_4818837_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 490.0
MMD1_k127_4818837_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 297.0
MMD1_k127_4818837_3 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000007487 249.0
MMD1_k127_4818837_4 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000003196 214.0
MMD1_k127_4818837_5 BFD-like [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000003041 194.0
MMD1_k127_4818837_6 Peptidase family M28 - - - 0.0000000000004475 69.0
MMD1_k127_4818837_7 NAD+ diphosphatase activity K01515,K03426 - 3.6.1.13,3.6.1.22 0.000000000823 71.0
MMD1_k127_482390_0 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 598.0
MMD1_k127_482390_1 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 384.0
MMD1_k127_482390_2 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 383.0
MMD1_k127_482390_3 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000004356 220.0
MMD1_k127_482390_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000000001869 131.0
MMD1_k127_482390_5 Plasmid stabilization system K19092 - - 0.0000000000000000000000000000002388 129.0
MMD1_k127_482390_6 MjaI restriction endonuclease - - - 0.00000000000000004639 81.0
MMD1_k127_4852731_0 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1212.0
MMD1_k127_4852731_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 546.0
MMD1_k127_4852731_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 379.0
MMD1_k127_4852731_3 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 292.0
MMD1_k127_4852731_4 TAT (twin-arginine translocation) pathway signal sequence K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009959 272.0
MMD1_k127_4852731_5 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000002477 218.0
MMD1_k127_4852731_6 Necessary for formate dehydrogenase activity K02380 - - 0.00000000000000000000000000000000000000000003339 172.0
MMD1_k127_4852731_7 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000004114 146.0
MMD1_k127_4891634_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 541.0
MMD1_k127_4891634_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 485.0
MMD1_k127_4891634_2 Electron transfer flavoprotein K03521 - - 0.00000000000000004951 84.0
MMD1_k127_4916980_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009924 565.0
MMD1_k127_4916980_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009702 381.0
MMD1_k127_4916980_10 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000002578 104.0
MMD1_k127_4916980_11 Alpha beta hydrolase - - - 0.00000000000000004153 81.0
MMD1_k127_4916980_2 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 302.0
MMD1_k127_4916980_3 amino acid K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 287.0
MMD1_k127_4916980_4 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004414 286.0
MMD1_k127_4916980_5 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002219 271.0
MMD1_k127_4916980_6 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006631 257.0
MMD1_k127_4916980_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000007602 209.0
MMD1_k127_4916980_8 Protein of unknown function (DUF1648) - - - 0.00000000000000000000000000000000000113 144.0
MMD1_k127_4916980_9 positive regulation of type IV pilus biogenesis K07343 - - 0.000000000000000000000000001763 115.0
MMD1_k127_4922860_0 PFAM Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 411.0
MMD1_k127_4922860_1 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 331.0
MMD1_k127_4922860_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002683 256.0
MMD1_k127_4922860_3 PFAM Acyl-CoA dehydrogenase N terminal K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000001047 225.0
MMD1_k127_4922860_4 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000001048 76.0
MMD1_k127_4951758_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 5.415e-202 635.0
MMD1_k127_4951758_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 314.0
MMD1_k127_4951758_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 319.0
MMD1_k127_4951758_4 Tetratricopeptide repeat - - - 0.0003098 51.0
MMD1_k127_5085276_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1056.0
MMD1_k127_5085276_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.631e-307 960.0
MMD1_k127_5085276_10 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000001122 78.0
MMD1_k127_5085276_11 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000201 70.0
MMD1_k127_5085276_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 502.0
MMD1_k127_5085276_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 454.0
MMD1_k127_5085276_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 370.0
MMD1_k127_5085276_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 320.0
MMD1_k127_5085276_6 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 302.0
MMD1_k127_5085276_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000001357 168.0
MMD1_k127_5085276_8 Jag_N K06346 - - 0.00000000000000000000000000000006436 130.0
MMD1_k127_5085276_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.0000000000000000000007789 98.0
MMD1_k127_5087159_0 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 501.0
MMD1_k127_5087159_1 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 409.0
MMD1_k127_5087159_2 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 310.0
MMD1_k127_5087159_3 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000003934 206.0
MMD1_k127_5087159_4 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000001789 188.0
MMD1_k127_5087159_5 Ethyl tert-butyl ether degradation EthD - - - 0.00000000000000000001535 94.0
MMD1_k127_5149672_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1106.0
MMD1_k127_5149672_1 Uncharacterized protein conserved in bacteria (DUF2344) - - - 1.625e-231 742.0
MMD1_k127_5149672_10 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 329.0
MMD1_k127_5149672_11 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007549 263.0
MMD1_k127_5149672_12 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009253 261.0
MMD1_k127_5149672_13 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001063 244.0
MMD1_k127_5149672_14 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000004355 222.0
MMD1_k127_5149672_15 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000005377 218.0
MMD1_k127_5149672_16 Cytidylyltransferase-like K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000005576 208.0
MMD1_k127_5149672_17 intermembrane phospholipid transfer K07323 - - 0.0000000000000000000000000000000000000000000000000001143 192.0
MMD1_k127_5149672_18 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000009029 183.0
MMD1_k127_5149672_19 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000001208 172.0
MMD1_k127_5149672_2 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 564.0
MMD1_k127_5149672_20 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000001242 173.0
MMD1_k127_5149672_21 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000042 141.0
MMD1_k127_5149672_22 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000003548 140.0
MMD1_k127_5149672_23 pfam nudix K03574 - 3.6.1.55 0.00000000000000000000000000000005233 130.0
MMD1_k127_5149672_24 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000008018 115.0
MMD1_k127_5149672_25 RNA polymerase-binding protein DksA K06204 - - 0.0000000000000000000000002327 111.0
MMD1_k127_5149672_26 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000008176 106.0
MMD1_k127_5149672_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 557.0
MMD1_k127_5149672_4 PFAM natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 550.0
MMD1_k127_5149672_5 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 421.0
MMD1_k127_5149672_6 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 409.0
MMD1_k127_5149672_7 MgtE intracellular - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 404.0
MMD1_k127_5149672_8 ABC-type transport system involved in resistance to organic solvents permease component K02066 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 314.0
MMD1_k127_5149672_9 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 308.0
MMD1_k127_5154315_0 Belongs to the carbamoyltransferase HypF family K04656 - - 3.535e-264 833.0
MMD1_k127_5154315_1 Hydrogenase expression formation protein hypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 441.0
MMD1_k127_5154315_2 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 412.0
MMD1_k127_5154315_3 hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000687 140.0
MMD1_k127_5154315_4 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000001308 85.0
MMD1_k127_5190961_0 Arginosuccinate synthase K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 538.0
MMD1_k127_5190961_1 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001815 270.0
MMD1_k127_5190961_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001961 255.0
MMD1_k127_5190961_3 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000001183 60.0
MMD1_k127_5215717_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 4.423e-274 862.0
MMD1_k127_5215717_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 473.0
MMD1_k127_5215717_2 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000003142 185.0
MMD1_k127_5215717_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000001321 125.0
MMD1_k127_5247123_0 BadF BadG BcrA BcrD - - - 0.0 1683.0
MMD1_k127_5247123_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1173.0
MMD1_k127_5247123_10 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001967 275.0
MMD1_k127_5247123_11 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588,K01945 - 5.4.99.18,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000001296 229.0
MMD1_k127_5247123_12 TspO/MBR family K05770 GO:0003674,GO:0005488,GO:0005575,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033013,GO:0044237,GO:0044425,GO:0046483,GO:0046906,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000005935 208.0
MMD1_k127_5247123_13 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000001081 203.0
MMD1_k127_5247123_14 NUDIX domain - GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 - 0.0000000000000000000000000000000000000000103 161.0
MMD1_k127_5247123_15 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000001053 151.0
MMD1_k127_5247123_16 PFAM pyridoxamine 5-phosphate oxidase-related FMN-binding - - - 0.0000000000000000000000000000000000008597 143.0
MMD1_k127_5247123_17 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000000000003039 121.0
MMD1_k127_5247123_18 PLD-like domain - - - 0.000000000000000000000005569 108.0
MMD1_k127_5247123_19 methyltransferase activity - - - 0.00000000000000000000001079 107.0
MMD1_k127_5247123_2 DNA photolyase K01669 - 4.1.99.3 4.33e-209 658.0
MMD1_k127_5247123_20 Protein of unknown function (DUF3047) - - - 0.000000000000000000004727 96.0
MMD1_k127_5247123_21 nucleoside-diphosphate sugar epimerase K07071 - - 0.000000004152 58.0
MMD1_k127_5247123_3 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 521.0
MMD1_k127_5247123_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 505.0
MMD1_k127_5247123_5 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 429.0
MMD1_k127_5247123_6 Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 354.0
MMD1_k127_5247123_7 epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 306.0
MMD1_k127_5247123_8 COG1233 Phytoene dehydrogenase and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 312.0
MMD1_k127_5247123_9 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 306.0
MMD1_k127_5251264_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K12955 - 3.6.3.6 7.635e-288 896.0
MMD1_k127_5251264_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 524.0
MMD1_k127_5251264_10 BioY family K03523 - - 0.00000000000000000000000000000000000000000000000000000003205 201.0
MMD1_k127_5251264_11 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000002323 161.0
MMD1_k127_5251264_12 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.00000000000000000000000000000000000000001651 155.0
MMD1_k127_5251264_13 Rubrerythrin - - - 0.000000000000000000000000000003046 121.0
MMD1_k127_5251264_14 Cobalt transport protein K16783,K16785 - - 0.00000000000000000000000000004326 127.0
MMD1_k127_5251264_15 amidohydrolase - - - 0.00000000000000000000000000004581 127.0
MMD1_k127_5251264_16 PFAM membrane protein of K08972 - - 0.000000000000000000000000002058 115.0
MMD1_k127_5251264_17 DsrE/DsrF-like family - - - 0.0000000000000000000000002797 109.0
MMD1_k127_5251264_19 DsrE/DsrF-like family - - - 0.0000000000001305 71.0
MMD1_k127_5251264_2 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 492.0
MMD1_k127_5251264_20 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000002221 66.0
MMD1_k127_5251264_21 phosphorelay signal transduction system K03413,K07315,K13924 - 2.1.1.80,3.1.1.61,3.1.3.3 0.000000000347 66.0
MMD1_k127_5251264_23 - - - - 0.0000002295 54.0
MMD1_k127_5251264_24 Sulfite exporter TauE/SafE K07090 - - 0.00005936 47.0
MMD1_k127_5251264_3 Peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 421.0
MMD1_k127_5251264_4 Cytochrome b/b6/petB K00412,K03888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 420.0
MMD1_k127_5251264_5 Responsible for energy coupling to the transport system K16784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009535 329.0
MMD1_k127_5251264_6 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 321.0
MMD1_k127_5251264_7 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 292.0
MMD1_k127_5251264_8 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000001835 236.0
MMD1_k127_5251264_9 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000000001131 224.0
MMD1_k127_5258479_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008475 279.0
MMD1_k127_5258479_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000000000000000000000007231 168.0
MMD1_k127_5258479_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000005248 136.0
MMD1_k127_5258479_3 helix_turn_helix, mercury resistance - - - 0.000000000000000000000003576 106.0
MMD1_k127_5258479_4 Belongs to the UPF0145 family - - - 0.000000000009171 71.0
MMD1_k127_5265106_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 518.0
MMD1_k127_5265106_1 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 480.0
MMD1_k127_5265106_2 PFAM tRNA synthetase, class II (D, K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 406.0
MMD1_k127_5265106_3 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 331.0
MMD1_k127_5265106_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 309.0
MMD1_k127_5265106_5 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000006889 183.0
MMD1_k127_5265106_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.00000000000000000000000000000000000000000001108 166.0
MMD1_k127_5265106_7 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000916 83.0
MMD1_k127_5265106_8 Lipopolysaccharide-assembly - - - 0.0000000002111 68.0
MMD1_k127_5270380_0 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K00355,K05587,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 1.004e-271 847.0
MMD1_k127_5270380_1 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 8.944e-228 716.0
MMD1_k127_5270380_10 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 469.0
MMD1_k127_5270380_11 acyl-coa dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 440.0
MMD1_k127_5270380_12 PFAM AMP-dependent synthetase and ligase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 435.0
MMD1_k127_5270380_13 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 426.0
MMD1_k127_5270380_14 lactate metabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 389.0
MMD1_k127_5270380_15 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 379.0
MMD1_k127_5270380_16 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 308.0
MMD1_k127_5270380_17 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 286.0
MMD1_k127_5270380_18 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000003255 230.0
MMD1_k127_5270380_19 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000004855 207.0
MMD1_k127_5270380_2 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01847,K01848 - 5.4.99.2 3.318e-227 715.0
MMD1_k127_5270380_20 PFAM PHP domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000002165 211.0
MMD1_k127_5270380_21 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000006727 207.0
MMD1_k127_5270380_22 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000002372 182.0
MMD1_k127_5270380_23 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000004694 175.0
MMD1_k127_5270380_24 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000002063 172.0
MMD1_k127_5270380_25 Archaebacterial flagellin - - - 0.00000000000000000000000000000000000000001205 160.0
MMD1_k127_5270380_26 Ferredoxin K17992 - 1.12.1.3 0.00000000000000000000000000000000000000003394 156.0
MMD1_k127_5270380_27 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000001493 154.0
MMD1_k127_5270380_28 Transcription regulator MerR DNA binding K21902 - - 0.0000000000000000000000000000000000001453 146.0
MMD1_k127_5270380_29 DRTGG domain - - - 0.00000000000000000000000000000006275 128.0
MMD1_k127_5270380_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.008e-226 718.0
MMD1_k127_5270380_30 DRTGG domain protein - - - 0.000000000000000000000000002347 115.0
MMD1_k127_5270380_31 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000757 93.0
MMD1_k127_5270380_4 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.688e-206 666.0
MMD1_k127_5270380_5 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.54e-197 621.0
MMD1_k127_5270380_6 acyl-coa dehydrogenase - - - 3.079e-194 611.0
MMD1_k127_5270380_7 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 625.0
MMD1_k127_5270380_8 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 539.0
MMD1_k127_5270380_9 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 495.0
MMD1_k127_5300968_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 366.0
MMD1_k127_5300968_1 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 371.0
MMD1_k127_5300968_10 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000001375 61.0
MMD1_k127_5300968_11 Type II secretion system (T2SS), protein M subtype b K02462 - - 0.0000000003991 69.0
MMD1_k127_5300968_12 - - - - 0.000001714 59.0
MMD1_k127_5300968_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K12955 - 3.6.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000001775 249.0
MMD1_k127_5300968_3 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000004081 209.0
MMD1_k127_5300968_4 Fimbrial assembly protein (PilN) K02461 - - 0.00000000000000000000000000000000000000000002635 180.0
MMD1_k127_5300968_5 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000843 154.0
MMD1_k127_5300968_6 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000009477 106.0
MMD1_k127_5300968_7 pilus assembly protein PilW K02459 - - 0.0000000000000000003095 97.0
MMD1_k127_5300968_8 type IV pilus modification protein PilV K02458 - - 0.0000000000000004137 85.0
MMD1_k127_5300968_9 Prokaryotic N-terminal methylation motif - - - 0.00000000000000166 83.0
MMD1_k127_5301052_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.031e-303 949.0
MMD1_k127_5301052_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 3.471e-208 675.0
MMD1_k127_5301052_10 translation initiation factor activity - - - 0.00000008492 63.0
MMD1_k127_5301052_11 PilZ domain - - - 0.00001139 54.0
MMD1_k127_5301052_2 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 374.0
MMD1_k127_5301052_3 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 379.0
MMD1_k127_5301052_4 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 332.0
MMD1_k127_5301052_5 PFAM fumarate reductase succinate dehydrogenase flavoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 331.0
MMD1_k127_5301052_6 Carbon-nitrogen hydrolase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 301.0
MMD1_k127_5301052_7 Flavin containing amine oxidoreductase K09835 - 5.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002705 270.0
MMD1_k127_5301052_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001578 212.0
MMD1_k127_5301052_9 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00798 - 2.5.1.17 0.0000000000000000000000000000000000002778 147.0
MMD1_k127_5307502_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008789 453.0
MMD1_k127_5307502_1 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000001029 167.0
MMD1_k127_5307502_2 GAF domain - - - 0.0000000000000000000000000000000000003027 164.0
MMD1_k127_5307502_3 SMART chemotaxis sensory transducer, histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000006302 107.0
MMD1_k127_5307502_4 GAF domain - - - 0.000000000000001155 79.0
MMD1_k127_5307502_5 Resolvase, N terminal domain K07450 - - 0.00001817 49.0
MMD1_k127_5312648_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 554.0
MMD1_k127_5312648_1 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 535.0
MMD1_k127_5312648_10 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 336.0
MMD1_k127_5312648_11 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 326.0
MMD1_k127_5312648_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000002447 265.0
MMD1_k127_5312648_13 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000008589 228.0
MMD1_k127_5312648_14 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000008603 221.0
MMD1_k127_5312648_15 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000001238 136.0
MMD1_k127_5312648_16 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000002449 132.0
MMD1_k127_5312648_17 S23 ribosomal protein - - - 0.000000000000000000000003974 106.0
MMD1_k127_5312648_18 methyltransferase - - - 0.0000000000000000000004308 104.0
MMD1_k127_5312648_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 462.0
MMD1_k127_5312648_3 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 461.0
MMD1_k127_5312648_4 PFAM Extracellular ligand-binding receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 448.0
MMD1_k127_5312648_5 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 414.0
MMD1_k127_5312648_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 391.0
MMD1_k127_5312648_7 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 368.0
MMD1_k127_5312648_8 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 366.0
MMD1_k127_5312648_9 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 346.0
MMD1_k127_5339109_0 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 295.0
MMD1_k127_5339109_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074,K17735 - 1.1.1.108,1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 291.0
MMD1_k127_5339109_2 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001513 278.0
MMD1_k127_5339109_3 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002911 279.0
MMD1_k127_5339109_4 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007488 267.0
MMD1_k127_5339109_5 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000002972 141.0
MMD1_k127_5339109_6 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000004061 129.0
MMD1_k127_5339109_7 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000003256 107.0
MMD1_k127_5339109_9 Belongs to the ompA family K03640 - - 0.0004557 49.0
MMD1_k127_5363701_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 8.757e-216 680.0
MMD1_k127_5363701_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 1.614e-195 626.0
MMD1_k127_5363701_12 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000006947 210.0
MMD1_k127_5363701_13 B3/4 domain - - - 0.00000000000000000000000000000000000000000000000000000005035 205.0
MMD1_k127_5363701_14 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000001954 175.0
MMD1_k127_5363701_15 PFAM transferase hexapeptide repeat containing protein - - - 0.0000000000000000000000000000000000000000234 158.0
MMD1_k127_5363701_16 Membrane - - - 0.00000000000000000000008663 104.0
MMD1_k127_5363701_17 Diguanylate cyclase - - - 0.000000000000000000002142 98.0
MMD1_k127_5363701_18 Evidence 4 Homologs of previously reported genes of K03975 - - 0.000000000608 61.0
MMD1_k127_5363701_2 extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 359.0
MMD1_k127_5363701_3 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 344.0
MMD1_k127_5363701_4 LamB/YcsF family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 309.0
MMD1_k127_5363701_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 297.0
MMD1_k127_5363701_6 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 297.0
MMD1_k127_5363701_7 Integral membrane protein TerC family K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001187 270.0
MMD1_k127_5363701_8 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000193 265.0
MMD1_k127_5363701_9 Allophanate hydrolase subunit 1 K06351 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005788 244.0
MMD1_k127_5375444_0 fatty acid transporter K02106 - - 1.159e-197 626.0
MMD1_k127_5375444_1 Nicotinic acid phosphoribosyltransferase K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 520.0
MMD1_k127_5375444_10 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000001851 216.0
MMD1_k127_5375444_11 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000000000000000000000009661 208.0
MMD1_k127_5375444_12 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000007397 174.0
MMD1_k127_5375444_14 PFAM peptidase - - - 0.0000006707 57.0
MMD1_k127_5375444_15 Zinc dependent phospholipase C - - - 0.00000112 60.0
MMD1_k127_5375444_2 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 529.0
MMD1_k127_5375444_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 423.0
MMD1_k127_5375444_4 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 332.0
MMD1_k127_5375444_5 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 344.0
MMD1_k127_5375444_6 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 319.0
MMD1_k127_5375444_7 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002126 258.0
MMD1_k127_5375444_8 Alpha beta hydrolase K14731 - 3.1.1.83 0.000000000000000000000000000000000000000000000000000000000000001345 231.0
MMD1_k127_5375444_9 - - - - 0.000000000000000000000000000000000000000000000000000000000001152 220.0
MMD1_k127_5383081_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.44e-202 639.0
MMD1_k127_5394705_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 0.0 1774.0
MMD1_k127_5394705_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 316.0
MMD1_k127_5394705_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000002712 213.0
MMD1_k127_5394705_3 Cold shock protein K03704 - - 0.00000000000000000000000002725 108.0
MMD1_k127_5428955_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 608.0
MMD1_k127_5428955_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 430.0
MMD1_k127_5428955_2 radical SAM domain protein - - - 0.00000000000000000000000000000001034 133.0
MMD1_k127_5428955_3 radical SAM domain protein - - - 0.000000000000000002124 87.0
MMD1_k127_5443563_0 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 372.0
MMD1_k127_5443563_1 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 323.0
MMD1_k127_5443563_2 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000005564 197.0
MMD1_k127_5443563_3 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000001911 167.0
MMD1_k127_5513970_0 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000004746 99.0
MMD1_k127_5513970_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000001301 88.0
MMD1_k127_5513970_2 COG0665 Glycine D-amino acid oxidases (deaminating) K00303 - 1.5.3.1 0.000000000001866 68.0
MMD1_k127_5513970_3 nuclear chromosome segregation - - - 0.0000000009447 65.0
MMD1_k127_5513970_4 Bacterial periplasmic substrate-binding proteins K02030 - - 0.000003503 58.0
MMD1_k127_5565419_0 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000003946 229.0
MMD1_k127_5565419_1 COG1233 Phytoene dehydrogenase and related proteins K09516 - 1.3.99.23 0.00000000000000000000000000000003243 143.0
MMD1_k127_5565419_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.00000000000000000007143 92.0
MMD1_k127_5565419_3 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000004958 55.0
MMD1_k127_5566859_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1028.0
MMD1_k127_5566859_1 Domain of unknown function (DUF4301) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 553.0
MMD1_k127_5566859_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000003303 226.0
MMD1_k127_5566859_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000003246 226.0
MMD1_k127_5566859_4 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000000000000000000000000000000000000004547 216.0
MMD1_k127_5566859_5 Phosphodiester glycosidase - - - 0.00000000000000000000008456 101.0
MMD1_k127_5566859_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000001271 73.0
MMD1_k127_5588165_0 PFAM asparagine synthase K01953 - 6.3.5.4 5.655e-197 632.0
MMD1_k127_5588165_1 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 382.0
MMD1_k127_5588165_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000004011 118.0
MMD1_k127_5589918_0 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 357.0
MMD1_k127_5589918_1 Pfam Response regulator receiver - - - 0.00000000000000000000000000001688 121.0
MMD1_k127_5589918_2 dextransucrase activity - - - 0.000000000000000000000000003608 115.0
MMD1_k127_5597445_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 437.0
MMD1_k127_5597445_1 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 403.0
MMD1_k127_5597445_10 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00006612 46.0
MMD1_k127_5597445_11 Bacterial antitoxin of type II TA system, VapB - - - 0.0004308 46.0
MMD1_k127_5597445_2 base-excision repair K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 317.0
MMD1_k127_5597445_3 Elongator protein 3, MiaB family, Radical SAM K09711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004051 278.0
MMD1_k127_5597445_4 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
MMD1_k127_5597445_5 geranylgeranyl reductase K10960 - 1.3.1.111,1.3.1.83 0.00000000000000000000000000000000000000000000000000000000000000000009704 249.0
MMD1_k127_5597445_6 PFAM response regulator receiver - - - 0.000000000000000000000000007834 114.0
MMD1_k127_5597445_7 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.00000000000000009558 87.0
MMD1_k127_5597445_8 PIN domain - - - 0.0000000000000002649 83.0
MMD1_k127_5597445_9 CDP-alcohol phosphatidyltransferase. Source PGD - - - 0.00000000000008643 79.0
MMD1_k127_5678302_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 415.0
MMD1_k127_5678302_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 376.0
MMD1_k127_5678302_10 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000001602 118.0
MMD1_k127_5678302_11 Methyltransferase domain - - - 0.0000000000000000000000002 113.0
MMD1_k127_5678302_12 polysaccharide biosynthetic process - - - 0.000000000000000000001417 108.0
MMD1_k127_5678302_13 Methyltransferase domain - - - 0.000000000000004287 83.0
MMD1_k127_5678302_14 PFAM Glycosyl transferases group 1 - - - 0.00000000000001755 85.0
MMD1_k127_5678302_2 Oxidoreductase family, NAD-binding Rossmann fold K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 370.0
MMD1_k127_5678302_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 320.0
MMD1_k127_5678302_4 transferase hexapeptide K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004857 274.0
MMD1_k127_5678302_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002491 262.0
MMD1_k127_5678302_6 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000876 149.0
MMD1_k127_5678302_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000001599 147.0
MMD1_k127_5678302_8 PFAM Glycosyl transferase, group 1 K02844 - - 0.000000000000000000000000000003225 123.0
MMD1_k127_5678302_9 Bacterial transferase hexapeptide (six repeats) K08280 - - 0.000000000000000000000000002128 119.0
MMD1_k127_5695029_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 441.0
MMD1_k127_5695029_1 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000295 278.0
MMD1_k127_5695029_2 AI-2E family transporter - - - 0.000000000000000000000000000003742 125.0
MMD1_k127_5695029_3 domain, Protein K01069 - 3.1.2.6 0.0000000000000000001099 89.0
MMD1_k127_5701572_0 Enoyl-CoA hydratase/isomerase K07539 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 9.99e-216 673.0
MMD1_k127_5701572_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 613.0
MMD1_k127_5701572_10 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 324.0
MMD1_k127_5701572_11 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 307.0
MMD1_k127_5701572_12 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006219 261.0
MMD1_k127_5701572_13 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003799 234.0
MMD1_k127_5701572_14 Enoyl-(Acyl carrier protein) reductase K07535 - - 0.00000000000000000000000000000000000000000000000000000000000000001971 231.0
MMD1_k127_5701572_15 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000002766 180.0
MMD1_k127_5701572_16 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000004861 171.0
MMD1_k127_5701572_17 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000001481 143.0
MMD1_k127_5701572_18 Periplasmic binding protein K01999 - - 0.0000000000000000000000000022 126.0
MMD1_k127_5701572_19 Glycine cleavage H-protein - - - 0.0000000000000000000000008518 105.0
MMD1_k127_5701572_2 Alcohol dehydrogenase GroES-like domain K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 587.0
MMD1_k127_5701572_20 YsiA-like protein, C-terminal region - - - 0.00000000000000000000006049 107.0
MMD1_k127_5701572_21 radical SAM domain protein K22318 - - 0.00000000000000002745 93.0
MMD1_k127_5701572_22 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000233 79.0
MMD1_k127_5701572_3 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009804 499.0
MMD1_k127_5701572_4 PFAM Acyl-CoA dehydrogenase K19066,K19067 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0036094,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0048037,GO:0050660,GO:0050662,GO:0051259,GO:0051262,GO:0052890,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.3.8.10,1.3.8.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 434.0
MMD1_k127_5701572_5 acyl-coa dehydrogenase K19066,K19067 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0036094,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0048037,GO:0050660,GO:0050662,GO:0051259,GO:0051262,GO:0052890,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.3.8.10,1.3.8.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 410.0
MMD1_k127_5701572_6 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 376.0
MMD1_k127_5701572_7 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 349.0
MMD1_k127_5701572_8 PFAM Acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 342.0
MMD1_k127_5701572_9 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 331.0
MMD1_k127_5756012_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.41e-298 952.0
MMD1_k127_5756012_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 1.478e-217 717.0
MMD1_k127_5756012_10 SurA N-terminal domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001898 197.0
MMD1_k127_5756012_11 FES K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000001982 193.0
MMD1_k127_5756012_12 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000001002 193.0
MMD1_k127_5756012_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000263 152.0
MMD1_k127_5756012_14 serine threonine protein kinase - - - 0.00000000000000000000000000004941 125.0
MMD1_k127_5756012_15 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000007246 128.0
MMD1_k127_5756012_16 Universal stress protein family - - - 0.0000000000000000000005221 102.0
MMD1_k127_5756012_17 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000001559 94.0
MMD1_k127_5756012_18 Protein of unknown function (DUF3426) - - - 0.0000000000000001247 91.0
MMD1_k127_5756012_19 Phospholipid methyltransferase - - - 0.00000000007797 67.0
MMD1_k127_5756012_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 564.0
MMD1_k127_5756012_3 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 471.0
MMD1_k127_5756012_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 314.0
MMD1_k127_5756012_5 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 296.0
MMD1_k127_5756012_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 293.0
MMD1_k127_5756012_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 293.0
MMD1_k127_5756012_8 oxidoreductase K10960 - 1.3.1.111,1.3.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000317 253.0
MMD1_k127_5756012_9 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000006646 199.0
MMD1_k127_5786784_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.482e-278 865.0
MMD1_k127_5786784_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 3.866e-200 633.0
MMD1_k127_5786784_10 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000004759 182.0
MMD1_k127_5786784_11 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000509 147.0
MMD1_k127_5786784_12 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000003502 124.0
MMD1_k127_5786784_2 CoA binding domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 621.0
MMD1_k127_5786784_3 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 561.0
MMD1_k127_5786784_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 483.0
MMD1_k127_5786784_5 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 379.0
MMD1_k127_5786784_6 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 374.0
MMD1_k127_5786784_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 299.0
MMD1_k127_5786784_8 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001831 280.0
MMD1_k127_5786784_9 helix_turn_helix, cAMP Regulatory protein K01420,K21563 - - 0.000000000000000000000000000000000000000000000000000000000004025 215.0
MMD1_k127_5814423_0 phosphoribosylamine-glycine ligase activity K01945,K01955 - 6.3.4.13,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 314.0
MMD1_k127_5814423_1 aldo keto reductase K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 314.0
MMD1_k127_5814423_2 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000000005332 201.0
MMD1_k127_5814423_3 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000005779 75.0
MMD1_k127_58518_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.305e-231 738.0
MMD1_k127_58518_1 Protein of unknown function (DUF434) - - - 0.0000000000000000000000000000000000000000000001369 176.0
MMD1_k127_58518_2 Major Facilitator - - - 0.0000000000000000000000000004691 119.0
MMD1_k127_58518_3 glutaredoxin-like protein, YruB-family - - - 0.0000000000007462 70.0
MMD1_k127_600860_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 554.0
MMD1_k127_600860_1 Protein of unknown function (DUF763) K09003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 471.0
MMD1_k127_600860_2 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 469.0
MMD1_k127_600860_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 312.0
MMD1_k127_600860_4 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000004697 130.0
MMD1_k127_600860_5 transcriptional regulator - - - 0.00000000000000000000000000001051 126.0
MMD1_k127_600860_6 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000001488 87.0
MMD1_k127_600860_7 sodium-dependent phosphate transmembrane transporter activity - - - 0.000000000000000009958 91.0
MMD1_k127_600860_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000003386 68.0
MMD1_k127_65791_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000959 154.0
MMD1_k127_65791_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00004786 56.0
MMD1_k127_700268_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 364.0
MMD1_k127_700268_1 Rhodanese Homology Domain K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 307.0
MMD1_k127_700268_2 carboxylic ester hydrolase activity K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000001028 272.0
MMD1_k127_700268_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000146 260.0
MMD1_k127_700268_4 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000003359 196.0
MMD1_k127_700268_5 Oxidoreductase molybdopterin binding domain K07147 - - 0.00000000000000000000000000000000000000000000000003425 185.0
MMD1_k127_700268_6 HIT domain K02503 - - 0.0000000000000000000000000000000000000001313 153.0
MMD1_k127_700268_7 PFAM TatD-related deoxyribonuclease K03424 - - 0.000000000000000000000000000000001259 140.0
MMD1_k127_700268_8 - - - - 0.0000001919 57.0
MMD1_k127_700268_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000002847 57.0
MMD1_k127_705624_0 Bacterial extracellular solute-binding protein K02012 - - 5.698e-198 621.0
MMD1_k127_705624_1 TOBE domain K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 530.0
MMD1_k127_705624_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 351.0
MMD1_k127_705624_3 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 323.0
MMD1_k127_705624_4 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000006627 224.0
MMD1_k127_705624_5 molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000000000000000001535 213.0
MMD1_k127_705624_6 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000003917 205.0
MMD1_k127_705624_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000002479 187.0
MMD1_k127_747212_0 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 463.0
MMD1_k127_747212_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000581 379.0
MMD1_k127_747212_2 Radical SAM superfamily K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000007249 267.0
MMD1_k127_747212_3 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000007015 274.0
MMD1_k127_747212_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000895 209.0
MMD1_k127_747212_5 Pfam:Methyltransf_26 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000009913 175.0
MMD1_k127_747212_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000002358 126.0
MMD1_k127_747212_7 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000002085 124.0
MMD1_k127_747212_8 Alternative locus ID K09835 - 5.2.1.13 0.000000003238 69.0
MMD1_k127_747212_9 Addiction module antidote protein - - - 0.00009176 48.0
MMD1_k127_772506_0 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 311.0
MMD1_k127_772506_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 319.0
MMD1_k127_772506_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 289.0
MMD1_k127_772506_3 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000007564 225.0
MMD1_k127_772506_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000001938 224.0
MMD1_k127_772506_5 Protease prsW family - - - 0.00000000000000000000000000000000000000000000004275 180.0
MMD1_k127_772506_6 NMT1-like family K02051 - - 0.00000000000000000000000000000000001135 148.0
MMD1_k127_772506_7 - - - - 0.0000000000000000000000000000309 125.0
MMD1_k127_777415_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 566.0
MMD1_k127_777415_1 Flavodoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 470.0
MMD1_k127_777415_2 Putative modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 368.0
MMD1_k127_777415_3 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001215 241.0
MMD1_k127_777415_4 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488 - - 0.000000000000000000000000000000000000000000000008498 174.0
MMD1_k127_777415_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000002175 168.0
MMD1_k127_777415_6 - - - - 0.0000000000000000000000001469 107.0
MMD1_k127_777415_7 Domain of unknown function (DUF4115) K15539 - - 0.00000004711 61.0
MMD1_k127_792273_0 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 310.0
MMD1_k127_792273_1 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001194 287.0
MMD1_k127_792273_2 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003778 261.0
MMD1_k127_792273_3 glucan 1,4-alpha-glucosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000191 251.0
MMD1_k127_792273_5 amine dehydrogenase activity - - - 0.00001225 51.0
MMD1_k127_794482_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 1.99e-259 812.0
MMD1_k127_794482_1 Pfam:Kce K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 370.0
MMD1_k127_794482_10 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000001606 120.0
MMD1_k127_794482_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 - - 0.0000000000000000000000294 104.0
MMD1_k127_794482_12 - - - - 0.000000000000000000002347 100.0
MMD1_k127_794482_2 NnrS protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 360.0
MMD1_k127_794482_3 Flavodoxin domain K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000008956 242.0
MMD1_k127_794482_4 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000003211 212.0
MMD1_k127_794482_5 signal peptide processing K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000006346 200.0
MMD1_k127_794482_6 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000001534 196.0
MMD1_k127_794482_7 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000004053 175.0
MMD1_k127_794482_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000002012 166.0
MMD1_k127_794482_9 Pfam:Kce - - - 0.000000000000000000000000001369 114.0
MMD1_k127_832792_0 Psort location Cytoplasmic, score - - - 0.0 1592.0
MMD1_k127_832792_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 6.97e-237 742.0
MMD1_k127_832792_10 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000001672 176.0
MMD1_k127_832792_11 Glycine cleavage system H protein K02437 - - 0.00000000000000000000000000000000000000000000007438 172.0
MMD1_k127_832792_12 Nitrate reductase gamma subunit K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000002031 172.0
MMD1_k127_832792_13 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0000000000000000000000000000000000000003387 156.0
MMD1_k127_832792_14 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000005343 72.0
MMD1_k127_832792_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 575.0
MMD1_k127_832792_3 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 402.0
MMD1_k127_832792_4 PFAM Coenzyme F420 hydrogenase dehydrogenase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 319.0
MMD1_k127_832792_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K16950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008176 319.0
MMD1_k127_832792_6 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 312.0
MMD1_k127_832792_7 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 306.0
MMD1_k127_832792_8 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000003734 229.0
MMD1_k127_832792_9 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001151 200.0
MMD1_k127_834146_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1232.0
MMD1_k127_834146_1 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 2.048e-229 718.0
MMD1_k127_834146_10 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 421.0
MMD1_k127_834146_11 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009419 399.0
MMD1_k127_834146_12 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 386.0
MMD1_k127_834146_13 histidine kinase, HAMP K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 387.0
MMD1_k127_834146_14 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 352.0
MMD1_k127_834146_15 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009975,GO:0016874,GO:0016886,GO:0044424,GO:0044464,GO:0140098 6.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 355.0
MMD1_k127_834146_16 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 338.0
MMD1_k127_834146_17 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 345.0
MMD1_k127_834146_18 response regulator K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 311.0
MMD1_k127_834146_19 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 285.0
MMD1_k127_834146_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.887e-215 680.0
MMD1_k127_834146_20 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007191 274.0
MMD1_k127_834146_21 tRNA 3'-trailer cleavage - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004006 253.0
MMD1_k127_834146_22 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000497 243.0
MMD1_k127_834146_23 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000002246 226.0
MMD1_k127_834146_24 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000002582 196.0
MMD1_k127_834146_25 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000002016 175.0
MMD1_k127_834146_26 TPR repeat - - - 0.000001026 62.0
MMD1_k127_834146_3 General secretory system II, protein E domain protein K02652 - - 3.095e-213 678.0
MMD1_k127_834146_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 582.0
MMD1_k127_834146_5 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 539.0
MMD1_k127_834146_6 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 519.0
MMD1_k127_834146_7 Type II secretion system (T2SS), protein F K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 471.0
MMD1_k127_834146_8 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008961 450.0
MMD1_k127_834146_9 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 429.0
MMD1_k127_83783_0 methionyl-tRNA aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 5.216e-206 653.0
MMD1_k127_83783_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 527.0
MMD1_k127_83783_10 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001071 257.0
MMD1_k127_83783_11 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000009146 228.0
MMD1_k127_83783_12 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000002765 213.0
MMD1_k127_83783_13 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000000002881 203.0
MMD1_k127_83783_14 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000003183 190.0
MMD1_k127_83783_15 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000003961 187.0
MMD1_k127_83783_16 Cyclophilin-like K09143 - - 0.000000000000000000000000000000000000001205 150.0
MMD1_k127_83783_17 Belongs to the bacterial histone-like protein family K05788 - - 0.0000000000000000000000000000006041 124.0
MMD1_k127_83783_18 Protein of unknown function (DUF721) - - - 0.00000000000000001204 89.0
MMD1_k127_83783_19 PFAM Class III cytochrome C family - - - 0.0000000000000002459 83.0
MMD1_k127_83783_2 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 402.0
MMD1_k127_83783_20 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.00000000000001292 83.0
MMD1_k127_83783_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 354.0
MMD1_k127_83783_4 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 344.0
MMD1_k127_83783_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 333.0
MMD1_k127_83783_6 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 326.0
MMD1_k127_83783_7 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 298.0
MMD1_k127_83783_8 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 295.0
MMD1_k127_83783_9 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002665 284.0
MMD1_k127_849295_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 5.489e-199 631.0
MMD1_k127_849295_1 Aminotransferase K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 524.0
MMD1_k127_849295_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 395.0
MMD1_k127_849295_3 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 292.0
MMD1_k127_849295_4 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000000000000002883 246.0
MMD1_k127_849295_5 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000002238 238.0
MMD1_k127_849295_6 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000003538 174.0
MMD1_k127_849295_7 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000003495 76.0
MMD1_k127_849295_8 PilZ domain K03406 - - 0.00005384 51.0
MMD1_k127_860344_0 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008632 358.0
MMD1_k127_860344_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 336.0
MMD1_k127_860344_10 AsmA-like C-terminal region K07289 - - 0.00000000007054 75.0
MMD1_k127_860344_11 Protein of unknown function (DUF1059) - - - 0.0000197 50.0
MMD1_k127_860344_2 alpha/beta hydrolase fold K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 290.0
MMD1_k127_860344_3 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001936 243.0
MMD1_k127_860344_4 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000168 228.0
MMD1_k127_860344_5 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000002902 212.0
MMD1_k127_860344_6 nitroreductase - - - 0.00000000000000000000000000000000000000000000000000191 189.0
MMD1_k127_860344_7 Helix-hairpin-helix motif - - - 0.0000000000000000000000000000000000000001222 157.0
MMD1_k127_860344_8 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000000000001264 139.0
MMD1_k127_860344_9 - - - - 0.00000000000000000000004124 101.0
MMD1_k127_872793_0 Domain of unknown function (DUF3394) - - - 1.009e-257 811.0
MMD1_k127_872793_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000003972 254.0
MMD1_k127_872793_2 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000006273 191.0
MMD1_k127_872793_3 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000000005515 170.0
MMD1_k127_873174_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 4.286e-226 711.0
MMD1_k127_873174_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 1.449e-210 660.0
MMD1_k127_873174_10 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000000000000000000000000000000000000004796 194.0
MMD1_k127_873174_11 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000005411 186.0
MMD1_k127_873174_12 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000001671 166.0
MMD1_k127_873174_13 Predicted membrane protein (DUF2231) - - - 0.000000000000000007164 89.0
MMD1_k127_873174_14 Competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000000000000006549 89.0
MMD1_k127_873174_15 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0044237 2.7.2.4 0.000000000000002474 76.0
MMD1_k127_873174_16 - - - - 0.0000000002642 66.0
MMD1_k127_873174_17 Peptidase family M48 - - - 0.0003617 44.0
MMD1_k127_873174_2 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 563.0
MMD1_k127_873174_3 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 526.0
MMD1_k127_873174_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 426.0
MMD1_k127_873174_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 428.0
MMD1_k127_873174_6 PFAM Cytochrome b5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000636 283.0
MMD1_k127_873174_7 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003455 256.0
MMD1_k127_873174_8 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001262 240.0
MMD1_k127_873174_9 Putative heavy-metal chelation - - - 0.0000000000000000000000000000000000000000000000000000000000000009477 228.0
MMD1_k127_895061_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 1.035e-195 621.0
MMD1_k127_895061_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 602.0
MMD1_k127_895061_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 464.0
MMD1_k127_895061_3 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 457.0
MMD1_k127_895061_4 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002215 279.0
MMD1_k127_895061_5 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000971 251.0
MMD1_k127_895061_6 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.000000000000000000000000000000000000000000000000000006708 205.0
MMD1_k127_895061_7 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000005277 134.0
MMD1_k127_895061_8 Outer membrane protein (OmpH-like) K06142 - - 0.00000004959 61.0
MMD1_k127_902708_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 4.397e-213 675.0
MMD1_k127_902708_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 412.0
MMD1_k127_902708_2 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 325.0
MMD1_k127_902708_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 316.0
MMD1_k127_902708_4 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 284.0
MMD1_k127_902708_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000001189 232.0
MMD1_k127_902708_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000006222 223.0
MMD1_k127_902708_7 Soluble P-type ATPase - - - 0.00000000000000000000002782 105.0
MMD1_k127_902708_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.00000000000000004175 84.0
MMD1_k127_902708_9 - - - - 0.000000002263 64.0
MMD1_k127_919276_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 434.0
MMD1_k127_919276_1 Phosphoadenosine phosphosulfate reductase family K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 409.0
MMD1_k127_919276_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 379.0
MMD1_k127_919276_3 DNA photolyase activity K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 352.0
MMD1_k127_919276_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 307.0
MMD1_k127_919276_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000002151 192.0
MMD1_k127_919276_6 chromosome segregation K03497 - - 0.000000000000000000000000001648 124.0
MMD1_k127_919276_7 - - - - 0.000000000000000001922 89.0
MMD1_k127_92402_0 GTP-binding protein TypA K06207 - - 2.225e-262 820.0
MMD1_k127_92402_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 358.0
MMD1_k127_92402_10 - - - - 0.0000000000000000000000000000000004247 134.0
MMD1_k127_92402_11 Protein of unknown function (DUF4019) - - - 0.000000000000000000000000000003587 125.0
MMD1_k127_92402_12 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000001114 104.0
MMD1_k127_92402_13 - - - - 0.0000000000000000000007736 98.0
MMD1_k127_92402_14 phosphorelay signal transduction system K07714 - - 0.000000000000000000001156 104.0
MMD1_k127_92402_15 - - - - 0.0000000000000000004591 89.0
MMD1_k127_92402_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 340.0
MMD1_k127_92402_3 Belongs to the DEAD box helicase family K05592 GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005372 289.0
MMD1_k127_92402_4 Phospholipase, patatin family K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001569 282.0
MMD1_k127_92402_5 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004355 273.0
MMD1_k127_92402_6 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001827 263.0
MMD1_k127_92402_7 pyridine nucleotide-disulphide oxidoreductase dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000007658 272.0
MMD1_k127_92402_8 - - - - 0.00000000000000000000000000000000005734 138.0
MMD1_k127_92402_9 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000247 135.0
MMD1_k127_94927_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 9.174e-220 695.0
MMD1_k127_94927_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 358.0
MMD1_k127_94927_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000004357 226.0
MMD1_k127_94927_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000002603 202.0
MMD1_k127_94927_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000001018 169.0
MMD1_k127_94927_5 Could be involved in septation K06412 - - 0.000000000000000000000000000000000002944 138.0
MMD1_k127_94927_6 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000000001849 115.0
MMD1_k127_9760_0 ATP-grasp domain K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 595.0
MMD1_k127_9760_1 Metallo-beta-lactamase domain protein K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 526.0
MMD1_k127_9760_10 acetyl coenzyme A synthetase K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000915 182.0
MMD1_k127_9760_11 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000008699 188.0
MMD1_k127_9760_12 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.000000000000000000000000000000000000000002609 158.0
MMD1_k127_9760_13 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000004809 141.0
MMD1_k127_9760_14 Cytochrome c K19713 - 1.8.2.2 0.0000000000000000000000005105 109.0
MMD1_k127_9760_15 - - - - 0.0000000000000000002017 102.0
MMD1_k127_9760_16 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.0000001546 61.0
MMD1_k127_9760_2 CoA-ligase K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 467.0
MMD1_k127_9760_3 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 358.0
MMD1_k127_9760_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 333.0
MMD1_k127_9760_5 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 312.0
MMD1_k127_9760_6 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 293.0
MMD1_k127_9760_7 Protein of unknown function (DUF401) K09133 - - 0.00000000000000000000000000000000000000000000000000000000000000004729 237.0
MMD1_k127_9760_8 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events. Might participate in the signaling cascades of growth factors and tumor necrosis factor-alpha by regulating the intracellular concentrations of H(2)O(2) K03386,K13279 GO:0000122,GO:0000187,GO:0000302,GO:0000303,GO:0000305,GO:0001775,GO:0001932,GO:0001934,GO:0002237,GO:0002252,GO:0002376,GO:0002520,GO:0002532,GO:0002536,GO:0002679,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0002831,GO:0002832,GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006801,GO:0006950,GO:0006952,GO:0006954,GO:0006979,GO:0007162,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008283,GO:0008340,GO:0008379,GO:0008430,GO:0009056,GO:0009266,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009636,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010259,GO:0010286,GO:0010310,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019219,GO:0019220,GO:0019222,GO:0019430,GO:0022407,GO:0022408,GO:0023051,GO:0023056,GO:0023057,GO:0030155,GO:0030193,GO:0030194,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031664,GO:0031665,GO:0032088,GO:0032101,GO:0032102,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032501,GO:0032502,GO:0032943,GO:0033554,GO:0033674,GO:0033993,GO:0034599,GO:0034614,GO:0042098,GO:0042110,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043207,GO:0043209,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043433,GO:0043523,GO:0043524,GO:0043549,GO:0043900,GO:0043901,GO:0044092,GO:0044093,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0045580,GO:0045581,GO:0045595,GO:0045596,GO:0045619,GO:0045620,GO:0045730,GO:0045859,GO:0045860,GO:0045892,GO:0045934,GO:0045937,GO:0046649,GO:0046651,GO:0046677,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0048872,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050818,GO:0050820,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050878,GO:0050896,GO:0051090,GO:0051093,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051186,GO:0051187,GO:0051193,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0051920,GO:0055114,GO:0060255,GO:0060548,GO:0061041,GO:0065007,GO:0065008,GO:0065009,GO:0070661,GO:0070887,GO:0071450,GO:0071451,GO:0071900,GO:0071902,GO:0072593,GO:0080090,GO:0080134,GO:0090303,GO:0097237,GO:0098754,GO:0098869,GO:1900046,GO:1900048,GO:1901099,GO:1901214,GO:1901215,GO:1901700,GO:1901701,GO:1902105,GO:1902106,GO:1902531,GO:1902533,GO:1902679,GO:1903034,GO:1903036,GO:1903037,GO:1903038,GO:1903506,GO:1903507,GO:1903706,GO:1903707,GO:1990748,GO:2000026,GO:2000112,GO:2000113,GO:2000377,GO:2000378,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000001484 224.0
MMD1_k127_9760_9 LUD domain - - - 0.000000000000000000000000000000000000000000000000000000006899 205.0
MMD1_k127_990650_0 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 346.0
MMD1_k127_990650_1 NUBPL iron-transfer P-loop NTPase K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 309.0
MMD1_k127_990650_2 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000001931 214.0
MMD1_k127_990650_3 Ribosomal protein L11 methyltransferase (PrmA) K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000005326 218.0
MMD1_k127_990650_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000002552 151.0
MMD1_k127_990650_5 Thioredoxin-like - - - 0.000000000000000000000000000000004028 134.0
MMD1_k127_990650_6 Lysin motif - - - 0.000000000000000000000000000001509 130.0
MMD1_k127_990650_7 NUBPL iron-transfer P-loop NTPase K04562 - - 0.00000000000000000000000000006617 123.0
MMD1_k127_995197_0 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.00000000000000000000000000000000000000000000000001637 186.0
MMD1_k127_995197_1 Tetratricopeptide repeat - - - 0.00000000000000000000092 109.0
MMD1_k127_995197_2 heat shock protein binding K03686 - - 0.0000000001639 73.0