Overview

ID MAG02351
Name MMD1_bin.4
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Patescibacteriota
Class Patescibacteriia
Order SG8-24
Family SG8-24
Genus JAFGIV01
Species
Assembly information
Completeness (%) 72.25
Contamination (%) 4.18
GC content (%) 61.0
N50 (bp) 3,830
Genome size (bp) 1,190,608

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes871

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1004397_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.0000000000000000000000000002978 125.0
MMD1_k127_1004397_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000004519 99.0
MMD1_k127_102607_0 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 390.0
MMD1_k127_1041517_0 Cytidylyltransferase-like - - - 0.000000000000000000000000000000000000000000000000000002876 205.0
MMD1_k127_1041517_1 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000012 138.0
MMD1_k127_1041517_2 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000936 54.0
MMD1_k127_1061231_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000138 168.0
MMD1_k127_1061231_1 Protein of unknown function (DUF3048) C-terminal domain - - - 0.0000000000000000000000000000004112 136.0
MMD1_k127_1061231_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000006471 73.0
MMD1_k127_1061231_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000003634 68.0
MMD1_k127_1069906_0 Domain of unknown function DUF21 K16302 - - 0.00000000000000000000000000000000000000000000000000000000000000000001579 244.0
MMD1_k127_1069906_1 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000003583 145.0
MMD1_k127_1075373_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000001405 222.0
MMD1_k127_1075373_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000001557 207.0
MMD1_k127_1078552_0 tRNA synthetases class II (D, K and N) K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009488 551.0
MMD1_k127_1078552_1 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001007 269.0
MMD1_k127_1081078_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 420.0
MMD1_k127_1081078_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000006995 107.0
MMD1_k127_1083246_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 549.0
MMD1_k127_1083246_1 Belongs to the glycosyl hydrolase family 6 K19355 - 3.2.1.78 0.000000000000000000000000001694 122.0
MMD1_k127_1083246_2 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000004054 80.0
MMD1_k127_1083246_3 Peptidase family M50 K11749 - - 0.000000000003839 76.0
MMD1_k127_1083246_4 Binds directly to 16S ribosomal RNA K02968 - - 0.0000001996 56.0
MMD1_k127_109733_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000005481 161.0
MMD1_k127_109733_1 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000001495 147.0
MMD1_k127_109733_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000007041 98.0
MMD1_k127_1110660_0 malic enzyme K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000009459 217.0
MMD1_k127_1110660_1 - - - - 0.000000000000000001479 96.0
MMD1_k127_1140517_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000002137 184.0
MMD1_k127_1140517_1 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000001679 138.0
MMD1_k127_1140517_2 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000002034 58.0
MMD1_k127_1153574_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 370.0
MMD1_k127_1153574_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001674 140.0
MMD1_k127_1153574_2 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00000000000000000003484 95.0
MMD1_k127_1165418_0 PFAM Glycosyl transferase family 2 - - - 0.000004908 59.0
MMD1_k127_1178110_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001003 282.0
MMD1_k127_1178110_1 Glycosyltransferase like family K07011 - - 0.00000000000000491 79.0
MMD1_k127_117953_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 335.0
MMD1_k127_117953_1 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000007588 128.0
MMD1_k127_117953_2 PFAM Response regulator receiver domain - - - 0.000000000000000000001435 100.0
MMD1_k127_117953_3 - - - - 0.0000000000000000004725 93.0
MMD1_k127_117953_4 chitin binding - - - 0.000000000000000286 89.0
MMD1_k127_117953_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000007994 61.0
MMD1_k127_117953_6 Copper binding proteins, plastocyanin/azurin family - - - 0.00005581 52.0
MMD1_k127_1202716_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002808 240.0
MMD1_k127_1274649_0 TIGRFAM autotransporter-associated beta strand repeat protein - - - 0.000000000000000000000000000003142 139.0
MMD1_k127_1274649_2 Conserved repeat domain - - - 0.0000004385 63.0
MMD1_k127_1290737_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002128 255.0
MMD1_k127_1290737_1 FAD dependent oxidoreductase K00273 - 1.4.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000231 241.0
MMD1_k127_1290737_2 PFAM Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000002195 209.0
MMD1_k127_1313582_0 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000462 208.0
MMD1_k127_1313582_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K09680 - 2.7.1.33 0.00000003551 65.0
MMD1_k127_1313582_2 Fic/DOC family N-terminal - - - 0.00002394 56.0
MMD1_k127_131872_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000002145 214.0
MMD1_k127_131872_1 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.000000000000000000000000000000000000000000000000000001869 199.0
MMD1_k127_1332520_0 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity K01587,K01923 - 4.1.1.21,6.3.2.6 0.00000000000000000000000000000000000003119 156.0
MMD1_k127_1332520_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000001305 130.0
MMD1_k127_1332520_2 phosphoribosyl-ATP diphosphatase activity K00765,K01663,K08736,K11755,K14152 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0004399,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016462,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,2.4.2.17,3.5.4.19,3.6.1.31 0.000000000000000000000000004372 119.0
MMD1_k127_1345042_0 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001416 272.0
MMD1_k127_1345042_1 Calcineurin-like phosphoesterase - - - 0.000000000000000007716 97.0
MMD1_k127_1345042_2 Translin. Source PGD - - - 0.0001075 47.0
MMD1_k127_1352497_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 325.0
MMD1_k127_1352497_1 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K00980 - 2.7.7.39 0.0000000000000000000000000000000000003371 145.0
MMD1_k127_1352497_2 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000007546 141.0
MMD1_k127_1352497_3 Maf-like protein DDB_G0281937 isoform X1 K06287 - - 0.00000000000000000000000000000002131 134.0
MMD1_k127_1352497_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000004743 126.0
MMD1_k127_1352497_5 MazG-like family - - - 0.000000000000000422 83.0
MMD1_k127_1352497_6 Domain of Unknown Function with PDB structure (DUF3850) - - - 0.00000000004488 68.0
MMD1_k127_1358566_0 Integrating conjugative element protein - - - 0.00000000000003511 87.0
MMD1_k127_1377081_0 - - - - 0.0000000000002099 84.0
MMD1_k127_1377081_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.000000261 53.0
MMD1_k127_1377081_2 Hep Hag repeat protein - - - 0.000007068 59.0
MMD1_k127_1406599_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 336.0
MMD1_k127_1447746_0 diaminopimelate decarboxylase activity K01585,K01586 - 4.1.1.19,4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 537.0
MMD1_k127_1447746_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 496.0
MMD1_k127_1447746_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 349.0
MMD1_k127_1447746_3 YmdB-like protein K02029,K02030,K09769 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578 - 0.000000000000000000000000000000000000000000000000000000000000000000006039 243.0
MMD1_k127_1447746_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000008614 91.0
MMD1_k127_1447746_5 phosphohydrolase - - - 0.00000001819 63.0
MMD1_k127_14682_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000119 181.0
MMD1_k127_14682_1 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000188 163.0
MMD1_k127_14682_2 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000001717 141.0
MMD1_k127_1470564_0 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 387.0
MMD1_k127_1470564_1 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000002915 132.0
MMD1_k127_1470564_2 WD40 repeats - - - 0.0000000002959 70.0
MMD1_k127_1487168_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008097 284.0
MMD1_k127_1487168_1 DALR anticodon binding domain K01887 - 6.1.1.19 0.00000000000000000000000000000001161 134.0
MMD1_k127_1500023_0 exo-alpha-(2->6)-sialidase activity - - - 0.00000002034 68.0
MMD1_k127_1513670_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 578.0
MMD1_k127_1513670_1 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.000000000000009754 76.0
MMD1_k127_1528086_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000001107 160.0
MMD1_k127_1528086_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000004394 123.0
MMD1_k127_1528086_2 Metallo-beta-lactamase superfamily domain - - - 0.000001889 57.0
MMD1_k127_1531852_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005757 251.0
MMD1_k127_1570220_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000004315 156.0
MMD1_k127_1570220_1 - - - - 0.0000000001487 70.0
MMD1_k127_1588179_0 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000001676 92.0
MMD1_k127_1601836_0 tRNA synthetases class II (D, K and N) K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 316.0
MMD1_k127_1601836_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496 - 0.00000000000000000000000000000000000000000000000000000000000001174 220.0
MMD1_k127_1601836_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000001781 188.0
MMD1_k127_1601836_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000001907 146.0
MMD1_k127_1601836_4 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000081 96.0
MMD1_k127_1601836_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000001707 87.0
MMD1_k127_1617120_0 Belongs to the DEAD box helicase family K05592,K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 461.0
MMD1_k127_1617120_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000003479 147.0
MMD1_k127_1636135_0 Cation efflux family K14696 - - 0.0000000000000000000000000000000000003349 153.0
MMD1_k127_1682889_0 Major Facilitator - - - 0.0000000000000000001155 101.0
MMD1_k127_1692263_0 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008315 282.0
MMD1_k127_1692263_1 cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000002711 185.0
MMD1_k127_1711950_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 558.0
MMD1_k127_1711950_1 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000002317 53.0
MMD1_k127_1718007_0 cyclic 2,3-diphosphoglycerate synthetase activity K05716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 602.0
MMD1_k127_1718007_1 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 511.0
MMD1_k127_1718007_2 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000008598 243.0
MMD1_k127_1718007_3 pseudouridine synthase activity K06179,K06180 - 5.4.99.23,5.4.99.24 0.000000000000000000000000000000000000000000000000001817 192.0
MMD1_k127_1718007_4 restriction endonuclease K07448 - - 0.0000000000000000003501 96.0
MMD1_k127_1792734_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 516.0
MMD1_k127_1792734_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 347.0
MMD1_k127_1792734_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 311.0
MMD1_k127_1792734_3 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.00004774 55.0
MMD1_k127_1794448_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000003952 182.0
MMD1_k127_1794448_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000008657 195.0
MMD1_k127_1794448_2 Extradiol ring-cleavage dioxygenase, class III K06990,K09141 - - 0.000000000000000000000000000000000000000004627 165.0
MMD1_k127_1810223_0 ABC transporter K02021,K18104 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 3.6.3.44 0.000000000000000000000000000000000000000000000000000233 196.0
MMD1_k127_1810732_0 phosphotransferase activity, for other substituted phosphate groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 302.0
MMD1_k127_1810732_1 Transcriptional regulator, TrmB - - - 0.0000000000000000000000000000000000000000000557 169.0
MMD1_k127_1810732_2 phosphonoacetaldehyde hydrolase activity K00817,K01560,K07025,K20866 - 2.6.1.9,3.1.3.10,3.8.1.2 0.000001949 58.0
MMD1_k127_1811938_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 308.0
MMD1_k127_1814370_0 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000005424 228.0
MMD1_k127_1840728_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000825 194.0
MMD1_k127_1852994_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 545.0
MMD1_k127_1880601_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.61e-219 699.0
MMD1_k127_1880601_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 367.0
MMD1_k127_1880601_2 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 362.0
MMD1_k127_1880601_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000009234 233.0
MMD1_k127_1880601_4 Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate K15024 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000009997 194.0
MMD1_k127_1880601_5 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.000000000000000000000000000000000003977 143.0
MMD1_k127_1880601_6 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000004783 83.0
MMD1_k127_1920130_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 328.0
MMD1_k127_1920130_1 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000005855 86.0
MMD1_k127_1920130_2 Protein of unknown function (DUF3467) - - - 0.00000000000000008691 83.0
MMD1_k127_192202_0 cell wall surface anchor family protein - - - 0.0000001519 64.0
MMD1_k127_1944253_0 alpha-ribazole phosphatase activity K02226,K07814 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 338.0
MMD1_k127_1944253_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000006747 235.0
MMD1_k127_1944253_10 Pyridoxamine 5'-phosphate oxidase - - - 0.00003576 52.0
MMD1_k127_1944253_11 Uridine monophosphate synthetase K13421 GO:0003674,GO:0003824,GO:0004588,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.10,4.1.1.23 0.00005185 55.0
MMD1_k127_1944253_12 RarD protein K05786 - - 0.0003809 48.0
MMD1_k127_1944253_2 Peptidase M56 - - - 0.0000000000000000000000000000000000000000000004054 173.0
MMD1_k127_1944253_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000003213 163.0
MMD1_k127_1944253_4 beta-lactamase domain protein - - - 0.000000000000000000000004032 111.0
MMD1_k127_1944253_5 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000005827 77.0
MMD1_k127_1944253_6 belongs to the nudix hydrolase family - - - 0.000000000006502 73.0
MMD1_k127_1944253_7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000001377 61.0
MMD1_k127_1944253_8 peptidyl-tyrosine sulfation - - - 0.000000535 60.0
MMD1_k127_1944253_9 Resolvase, N terminal domain - - - 0.00003317 47.0
MMD1_k127_1963687_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 300.0
MMD1_k127_1964907_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000004894 220.0
MMD1_k127_1964907_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000002465 207.0
MMD1_k127_1964907_2 UMP kinase activity K00947,K09903 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030151,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 2.7.4.22 0.000000000000000000000000000000000000000000000000000000001083 209.0
MMD1_k127_1964907_3 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000002829 168.0
MMD1_k127_1964907_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000001069 53.0
MMD1_k127_1969007_0 Glycosyltransferase like family 2 K03606,K07011 - - 0.00000000000000000000000000000000000000000000000000000001903 206.0
MMD1_k127_1969007_1 Glycosyl transferase - - - 0.0000000000000000000000000000002405 132.0
MMD1_k127_1969007_2 Protein of unknown function (DUF4012) - - - 0.00009613 54.0
MMD1_k127_197678_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 350.0
MMD1_k127_197678_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 341.0
MMD1_k127_1988006_0 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000002057 100.0
MMD1_k127_1988006_1 dipeptidyl-peptidase activity - - - 0.000000000008233 74.0
MMD1_k127_1988006_2 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000002646 68.0
MMD1_k127_1988006_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000003538 63.0
MMD1_k127_1988006_4 helicase activity - - - 0.00006684 55.0
MMD1_k127_208695_0 Glycosyl transferases group 1 K12993 - - 0.00000000000000000000000000000000000000000000000001139 194.0
MMD1_k127_208695_1 Protein of unknown function (DUF4012) - - - 0.000000000000000000000000000000008909 148.0
MMD1_k127_2088850_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 475.0
MMD1_k127_2088850_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000005636 137.0
MMD1_k127_2088850_2 - - - - 0.0000000000000000001782 89.0
MMD1_k127_2088850_3 - - - - 0.000000000000000003504 85.0
MMD1_k127_2088850_4 - - - - 0.000000000000002484 78.0
MMD1_k127_2088850_5 - - - - 0.0000000000004431 70.0
MMD1_k127_2088850_6 - - - - 0.0000000000007206 70.0
MMD1_k127_2088850_7 - - - - 0.00000005622 55.0
MMD1_k127_2088850_8 - - - - 0.0000001722 53.0
MMD1_k127_2101124_0 Zinc-dependent metalloprotease - - - 0.00000000000000000000000000004584 128.0
MMD1_k127_2101124_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557,K03215 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.190,2.1.1.35 0.000000000000000000009966 100.0
MMD1_k127_2101124_2 - - - - 0.00000000000001303 84.0
MMD1_k127_2101124_3 Nucleoside 2-deoxyribosyltransferase like - - - 0.00000002594 57.0
MMD1_k127_2101124_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000001108 61.0
MMD1_k127_2101124_6 ACT domain K01079 GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0004722,GO:0005488,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016597,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0031406,GO:0036094,GO:0036211,GO:0040007,GO:0042578,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 3.1.3.3 0.00004094 54.0
MMD1_k127_2103407_0 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000002589 120.0
MMD1_k127_2103407_1 TonB-dependent receptor plug - - - 0.000007143 57.0
MMD1_k127_2117736_0 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000133 278.0
MMD1_k127_2117736_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000001035 225.0
MMD1_k127_2117736_2 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000496 60.0
MMD1_k127_2117736_3 Transposase - - - 0.0000007887 56.0
MMD1_k127_2117736_4 - - - - 0.0003276 44.0
MMD1_k127_2143591_0 Chaperone - - - 0.0000000000000002877 91.0
MMD1_k127_2144089_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001479 284.0
MMD1_k127_2144089_1 Preprotein translocase SecG subunit K03075 - - 0.000000000001221 72.0
MMD1_k127_216245_1 - - - - 0.00000000000000000000000000000001482 138.0
MMD1_k127_216245_2 - - - - 0.000000000001081 79.0
MMD1_k127_216245_3 Galactose oxidase, central domain K08282 - 2.7.11.1 0.0003889 48.0
MMD1_k127_2177025_0 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000004496 210.0
MMD1_k127_2177025_1 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000003736 110.0
MMD1_k127_2177025_2 Evidence 5 No homology to any previously reported sequences K09005 - - 0.000000000000000000000246 103.0
MMD1_k127_2177025_3 Trypsin-like peptidase domain - - - 0.0000004134 59.0
MMD1_k127_2208972_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004225 260.0
MMD1_k127_2208972_1 Cold shock protein domain - - - 0.0000000000007462 70.0
MMD1_k127_2222538_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 325.0
MMD1_k127_2222538_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009378,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:1901360 3.6.4.12 0.00000000000000000000000000003027 124.0
MMD1_k127_2222538_2 - - - - 0.000000000000000000000101 107.0
MMD1_k127_2222538_3 by glimmer - - - 0.000000001481 62.0
MMD1_k127_2222538_4 helix_turn_helix, mercury resistance - - - 0.0002277 51.0
MMD1_k127_2225832_0 -O-antigen - - - 0.0000253 57.0
MMD1_k127_2259085_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 438.0
MMD1_k127_2259085_1 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 320.0
MMD1_k127_2259085_2 RNA methylase - GO:0003674,GO:0003824,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000006998 94.0
MMD1_k127_2259085_3 Belongs to the carbohydrate kinase PfkB family K00847 - 2.7.1.4 0.0000000000000001052 92.0
MMD1_k127_2293587_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 317.0
MMD1_k127_2293587_1 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003027 246.0
MMD1_k127_2293587_2 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000001193 227.0
MMD1_k127_2293587_3 TIGRFAM 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000001062 183.0
MMD1_k127_2293587_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000001558 122.0
MMD1_k127_2293587_5 RNA methyltransferase TrmH family K03437 - - 0.00000000000000001654 91.0
MMD1_k127_2293587_6 deaminase K01494 - 3.5.4.13 0.00001885 53.0
MMD1_k127_23080_0 Histidine kinase - - - 0.000000000000000000000000000000000003552 151.0
MMD1_k127_23080_1 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000002184 91.0
MMD1_k127_2313262_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001351 259.0
MMD1_k127_2313262_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000001956 226.0
MMD1_k127_2330574_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 440.0
MMD1_k127_2330574_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 362.0
MMD1_k127_2330574_2 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000005412 231.0
MMD1_k127_2330574_3 SUF system FeS assembly protein K04488 - - 0.000000000000000000000004371 109.0
MMD1_k127_2330574_4 TIGRFAM FeS assembly protein K07033,K09014,K09015 - - 0.0000000000000000000001858 104.0
MMD1_k127_2330574_5 metal-sulfur cluster biosynthetic - - - 0.000000000000006868 78.0
MMD1_k127_2344663_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000136 214.0
MMD1_k127_2344663_1 Glycosyl transferases group 1 - - - 0.000000000008688 76.0
MMD1_k127_2387944_0 regulator of chromosome condensation, RCC1 - - - 0.0000002995 64.0
MMD1_k127_2387944_1 domain protein - - - 0.00001093 59.0
MMD1_k127_2401480_0 Cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009444 371.0
MMD1_k127_2401480_1 Rod shape-determining protein MreC K03570 - - 0.0000000000000001368 90.0
MMD1_k127_2401480_2 Histidine kinase A domain protein - - - 0.0000000002561 66.0
MMD1_k127_2401480_3 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00007484 49.0
MMD1_k127_2401480_4 PD-(D/E)XK nuclease superfamily K07465 - - 0.0009645 43.0
MMD1_k127_2401564_0 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000002305 184.0
MMD1_k127_2401564_1 glutamine amidotransferase K01951 - 6.3.5.2 0.0000000000000000000000000004288 124.0
MMD1_k127_2401564_2 Endonuclease I - - - 0.00000006263 64.0
MMD1_k127_2406236_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 312.0
MMD1_k127_2406236_1 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000005452 210.0
MMD1_k127_2413405_0 magnesium-translocating P-type ATPase K01531 - 3.6.3.2 0.0000000000000000000000000000000000000000000003002 171.0
MMD1_k127_2413405_2 Belongs to the glycosyl hydrolase 57 family K06044 - 5.4.99.15 0.000000000009505 77.0
MMD1_k127_2426061_0 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000003436 260.0
MMD1_k127_2426061_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000006029 197.0
MMD1_k127_2426061_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000009524 148.0
MMD1_k127_2426061_3 AAA ATPase domain - - - 0.00000000000000000005822 94.0
MMD1_k127_2426061_4 SMART Peptidase A22, presenilin signal peptide - - - 0.000000000000003023 86.0
MMD1_k127_2426061_5 COG0237 Dephospho-CoA kinase - - - 0.00000000001631 73.0
MMD1_k127_2445881_0 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000003523 156.0
MMD1_k127_2445881_1 DNA polymerase III, delta subunit K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000003516 150.0
MMD1_k127_2445881_2 cellulose binding - - - 0.0000000000000000000001651 110.0
MMD1_k127_245284_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000006766 186.0
MMD1_k127_245284_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000003822 128.0
MMD1_k127_245284_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000003247 121.0
MMD1_k127_245284_3 Aminoacyl-tRNA editing domain K19055 - - 0.0000000688 62.0
MMD1_k127_2454384_0 TIGRFAM periplasmic serine protease, Do DeqQ family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000008906 238.0
MMD1_k127_2454470_0 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000001003 191.0
MMD1_k127_2454470_1 Polysaccharide biosynthesis protein K00067 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008831,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019305,GO:0019438,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576 1.1.1.133 0.00000000000000000000000000000000000000003127 162.0
MMD1_k127_2454470_2 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000002122 155.0
MMD1_k127_2458316_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001818 269.0
MMD1_k127_2458316_1 zinc metalloprotease K04771,K11749,K16922 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000004963 217.0
MMD1_k127_245844_0 Type II secretion system K02653 - - 0.000000000000000001677 87.0
MMD1_k127_245844_1 Glycosyl hydrolases family 31 - - - 0.0001093 53.0
MMD1_k127_2461671_0 PAP2 superfamily - - - 0.00000000000000009237 88.0
MMD1_k127_2461671_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000006658 85.0
MMD1_k127_2462536_0 Belongs to the ClpA ClpB family K03695,K03696 - - 0.00000000000000000000000000000000000000000000000003911 194.0
MMD1_k127_2462536_1 Glycosyl transferase, family 2 K01002,K20534 - 2.7.8.20 0.00003267 56.0
MMD1_k127_246753_1 F420-dependent oxidoreductase K12234 GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0044237,GO:0044249,GO:0044464,GO:0051186,GO:0051188,GO:0071944 6.3.2.31,6.3.2.34 0.0000005263 59.0
MMD1_k127_2510220_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 458.0
MMD1_k127_2510220_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000001426 187.0
MMD1_k127_2510220_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000008598 120.0
MMD1_k127_2510220_3 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000003526 113.0
MMD1_k127_2510220_4 PFAM diacylglycerol kinase catalytic region - - - 0.000000000000002231 87.0
MMD1_k127_2510220_5 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000000433 63.0
MMD1_k127_2543002_0 SMART RNA-processing protein HAT helix repeating-containing protein - - - 0.000000001061 71.0
MMD1_k127_2543002_1 Fic/DOC family K07341 - - 0.000194 46.0
MMD1_k127_2561219_0 Aminotransferase class-III K00819,K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.13,2.6.1.17 0.000000000000000000000000000000000000000000000000000009904 203.0
MMD1_k127_2561219_1 Site-specific recombinase XerD K04763 - - 0.0007747 43.0
MMD1_k127_2571627_0 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000008508 228.0
MMD1_k127_2571627_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000004393 115.0
MMD1_k127_2571627_2 Polysaccharide biosynthesis protein - - - 0.000000000000003241 88.0
MMD1_k127_2591119_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000139 282.0
MMD1_k127_2591119_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000003245 227.0
MMD1_k127_2591119_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000001898 176.0
MMD1_k127_2591119_3 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000009107 111.0
MMD1_k127_2591119_5 Belongs to the peptidase S8 family - - - 0.00005417 53.0
MMD1_k127_2596749_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000002537 136.0
MMD1_k127_2596749_1 adenosine deaminase K01488,K02029,K21053 - 3.5.4.2,3.5.4.4 0.000000000000000000000000001245 124.0
MMD1_k127_25986_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 418.0
MMD1_k127_25986_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 336.0
MMD1_k127_2616924_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002984 271.0
MMD1_k127_2616924_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000001926 231.0
MMD1_k127_2618912_0 Thrombospondin type 3 - - - 0.0000018 61.0
MMD1_k127_2658880_0 COG2217 Cation transport ATPase - - - 0.0000000000000000000007033 103.0
MMD1_k127_2658880_1 AAA domain - - - 0.0000000009378 70.0
MMD1_k127_2670881_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000001048 188.0
MMD1_k127_2698349_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 416.0
MMD1_k127_2698349_1 COG0531 Amino acid transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 370.0
MMD1_k127_2698349_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000007358 224.0
MMD1_k127_2698349_3 PFAM Prephenate dehydratase K04518 - 4.2.1.51 0.000004655 54.0
MMD1_k127_2711714_0 SPFH domain / Band 7 family - - - 1.224e-236 749.0
MMD1_k127_2711714_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000001944 199.0
MMD1_k127_272629_0 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 469.0
MMD1_k127_272629_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 385.0
MMD1_k127_272629_2 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000006337 90.0
MMD1_k127_272629_3 Helix-turn-helix domain - - - 0.00002838 55.0
MMD1_k127_2728501_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000001108 240.0
MMD1_k127_2728501_1 Transcriptional regulator, AbiEi antitoxin - - - 0.00000000000000009911 87.0
MMD1_k127_2728501_2 Methionine biosynthesis protein MetW - - - 0.00002134 54.0
MMD1_k127_2750631_0 - K09712,K14475 - - 0.0000000000000000000001923 105.0
MMD1_k127_279382_0 sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000007679 242.0
MMD1_k127_279382_1 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000008498 138.0
MMD1_k127_279382_2 Polysaccharide pyruvyl transferase - - - 0.00000000000000000605 86.0
MMD1_k127_279382_3 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 0.00006177 53.0
MMD1_k127_2793981_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 328.0
MMD1_k127_2793981_1 - - - - 0.000000000000000001472 101.0
MMD1_k127_2793981_2 PFAM Glycosyl transferase family 2 K00721,K20534 - 2.4.1.83 0.000000418 53.0
MMD1_k127_280919_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000005112 152.0
MMD1_k127_280919_1 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000007177 161.0
MMD1_k127_280919_2 ADP-ribosylglycohydrolase - - - 0.000000000000000009337 94.0
MMD1_k127_280919_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000006949 85.0
MMD1_k127_280919_4 Micrococcal nuclease (thermonuclease) homologs K01174 - 3.1.31.1 0.000008248 57.0
MMD1_k127_2810921_0 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000009296 238.0
MMD1_k127_2810921_1 RNA-binding protein - - - 0.00000000000000000000000000427 113.0
MMD1_k127_2821016_0 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 410.0
MMD1_k127_2821016_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 382.0
MMD1_k127_2828172_0 Sugar transferase K03606 - - 0.000000000000001379 88.0
MMD1_k127_2840497_0 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000001269 82.0
MMD1_k127_2840497_1 - - - - 0.000000000000002075 84.0
MMD1_k127_2840497_2 Histidine phosphatase superfamily (branch 1) - - - 0.000000000002719 67.0
MMD1_k127_2840497_3 prohibitin homologues - - - 0.0000003106 59.0
MMD1_k127_2840497_4 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.000005818 56.0
MMD1_k127_2840497_5 DNA-binding transcription factor activity K21903 - - 0.0006629 48.0
MMD1_k127_2845642_0 PFAM glycosidase, PH1107-related K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000002954 249.0
MMD1_k127_2845642_1 PFAM Glycosidase K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000002197 147.0
MMD1_k127_2851963_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 605.0
MMD1_k127_2851963_1 PAN domain - - - 0.0000000634 67.0
MMD1_k127_2852199_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 326.0
MMD1_k127_2852199_1 - - - - 0.00000000000000000000000000000000000000000000000003787 187.0
MMD1_k127_2856294_0 PFAM aminotransferase class V K04487 GO:0003674,GO:0003824,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0022607,GO:0031071,GO:0031163,GO:0040007,GO:0044085,GO:0044237,GO:0051186,GO:0071840 2.8.1.7 0.00000000000000000000000000000000000000000000000000000004695 208.0
MMD1_k127_2856294_1 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00000000000000000000002285 102.0
MMD1_k127_2856294_2 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000001948 78.0
MMD1_k127_2860243_0 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 357.0
MMD1_k127_2881106_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 361.0
MMD1_k127_2881106_1 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000003179 90.0
MMD1_k127_2881419_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 382.0
MMD1_k127_2881419_1 queuosine biosynthetic process K03470,K09765 - 1.17.99.6,3.1.26.4 0.000000000000000000000000000000000001824 149.0
MMD1_k127_2881419_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00005748 53.0
MMD1_k127_2881996_0 peptidase activity, acting on L-amino acid peptides K20276,K21449 - - 0.0000000000000000000000000000000000002214 155.0
MMD1_k127_2915989_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 356.0
MMD1_k127_2915989_1 Cysteinyl-tRNA synthetase K01884 - 6.1.1.16 0.0000000000000000000000000000000000005123 151.0
MMD1_k127_2986047_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1206.0
MMD1_k127_2986047_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 396.0
MMD1_k127_3022476_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 491.0
MMD1_k127_3022476_1 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000007846 217.0
MMD1_k127_3022476_2 hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000009819 185.0
MMD1_k127_3022476_3 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000000108 178.0
MMD1_k127_3022476_4 Colicin V production protein K03558 - - 0.00003168 53.0
MMD1_k127_3026238_0 cellulose binding - - - 0.00000000000000000000000000000000001514 150.0
MMD1_k127_3026238_1 Two component regulator propeller - - - 0.000000006181 68.0
MMD1_k127_3027851_0 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000005685 187.0
MMD1_k127_3070754_0 DEAD-like helicases superfamily K01156 - 3.1.21.5 0.0000000000000000000000000000000000000001378 159.0
MMD1_k127_3070754_1 LUD domain - - - 0.000000000000000000000000000000000001385 145.0
MMD1_k127_3079055_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 496.0
MMD1_k127_3079055_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000002627 222.0
MMD1_k127_3079055_2 Zeta toxin - - - 0.00000000002759 73.0
MMD1_k127_3093366_0 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000007929 149.0
MMD1_k127_3093366_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000009811 117.0
MMD1_k127_3093366_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000113 68.0
MMD1_k127_3093366_3 Belongs to the bacterial ribosomal protein bL35 family - - - 0.0005679 45.0
MMD1_k127_30967_0 PIF1-like helicase K15255 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 454.0
MMD1_k127_30967_1 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000006535 129.0
MMD1_k127_3115875_0 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001229 264.0
MMD1_k127_3115875_1 - - - - 0.00000000000000000000000000000000000000000000000000000007858 202.0
MMD1_k127_3115875_2 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000008765 169.0
MMD1_k127_3115875_3 - - - - 0.00000000001096 76.0
MMD1_k127_3132005_0 synthase K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 475.0
MMD1_k127_3132005_1 COG2199 FOG GGDEF domain - - - 0.00000000000000000000000000000000001383 141.0
MMD1_k127_3132005_2 - - - - 0.000000001222 59.0
MMD1_k127_3136838_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 535.0
MMD1_k127_3147258_0 F420-0:Gamma-glutamyl ligase K12234,K22099 - 6.3.2.12,6.3.2.17,6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000004051 195.0
MMD1_k127_3147258_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000003806 134.0
MMD1_k127_3147258_2 - - - - 0.000000000000000000000000505 112.0
MMD1_k127_3147258_3 - - - - 0.000001136 55.0
MMD1_k127_3227219_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 2.348e-299 940.0
MMD1_k127_323650_0 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 349.0
MMD1_k127_323650_1 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001525 232.0
MMD1_k127_323650_2 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.00000001759 67.0
MMD1_k127_3238619_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 439.0
MMD1_k127_3238619_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000008088 182.0
MMD1_k127_3242456_0 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007449 545.0
MMD1_k127_3242456_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001294 239.0
MMD1_k127_3242456_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000003915 221.0
MMD1_k127_3242456_3 PFAM Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000001653 173.0
MMD1_k127_3276633_0 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.000000000000000000009966 100.0
MMD1_k127_3317039_0 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000862 197.0
MMD1_k127_3317039_1 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000001437 189.0
MMD1_k127_3322510_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.409e-279 871.0
MMD1_k127_3328595_0 phosphoribosylaminoimidazole carboxylase activity K01587 GO:0000082,GO:0000278,GO:0003674,GO:0003824,GO:0004638,GO:0004639,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0022402,GO:0034641,GO:0034654,GO:0042440,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0046040,GO:0046112,GO:0046148,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903047 4.1.1.21,6.3.2.6 0.00000000000002016 80.0
MMD1_k127_3328595_1 Belongs to the peptidase S16 family - - - 0.000005686 53.0
MMD1_k127_3335608_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 460.0
MMD1_k127_3335608_1 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 308.0
MMD1_k127_3335608_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000001336 220.0
MMD1_k127_3365148_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007125 449.0
MMD1_k127_3365148_1 HNH nucleases - - - 0.0000000000000000000000000000000000007974 144.0
MMD1_k127_3365148_2 Bacterial PH domain - - - 0.0000283 51.0
MMD1_k127_3390501_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 389.0
MMD1_k127_3390501_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000005303 125.0
MMD1_k127_3390501_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000002049 64.0
MMD1_k127_3390501_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000001391 55.0
MMD1_k127_3410353_0 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000007297 195.0
MMD1_k127_3410353_1 cell envelope-related transcriptional attenuator - - - 0.000000000000000000000000000000000000000002807 168.0
MMD1_k127_3410353_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000005891 63.0
MMD1_k127_3414213_0 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 458.0
MMD1_k127_3414213_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000114 227.0
MMD1_k127_3414213_2 glucokinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000002368 193.0
MMD1_k127_3414213_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000001602 90.0
MMD1_k127_3421264_0 Shoulder domain K17266 - - 0.000000000000000000000000000000000000000000002137 175.0
MMD1_k127_3421264_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000002683 67.0
MMD1_k127_3421264_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000001901 58.0
MMD1_k127_3431301_0 TspO/MBR family K05770 - - 0.0000000000000000000001634 103.0
MMD1_k127_3431301_1 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000001691 76.0
MMD1_k127_3435063_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000001223 234.0
MMD1_k127_3435063_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 0.0000000000000000000000000000000000000000000003748 172.0
MMD1_k127_3435063_2 Prokaryotic N-terminal methylation motif - - - 0.000001354 61.0
MMD1_k127_3447072_0 Uncharacterized protein family UPF0004 K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 314.0
MMD1_k127_3447072_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000003081 69.0
MMD1_k127_3489943_0 Methyltransferase domain - - - 0.000004329 51.0
MMD1_k127_3508203_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.204e-271 850.0
MMD1_k127_3508203_1 Mg chelatase-like protein K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 474.0
MMD1_k127_3508203_2 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000008845 195.0
MMD1_k127_3508203_3 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000004922 168.0
MMD1_k127_3508203_4 NYN domain - - - 0.00000000000000000000000001044 113.0
MMD1_k127_3518577_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000025 240.0
MMD1_k127_3524741_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 347.0
MMD1_k127_3524741_1 GnaT family - - - 0.000000000003718 72.0
MMD1_k127_353318_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005891 283.0
MMD1_k127_353318_1 PFAM O-antigen polymerase K18814 - - 0.0000000000000009742 91.0
MMD1_k127_356736_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000002543 181.0
MMD1_k127_3606583_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009184 248.0
MMD1_k127_3606583_1 - - - - 0.00000000000003306 83.0
MMD1_k127_3606583_2 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000002789 64.0
MMD1_k127_3636800_0 ribose phosphate diphosphokinase activity - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0044424,GO:0044444,GO:0044464,GO:0055044,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005033 282.0
MMD1_k127_3636800_1 Alkaline and neutral invertase - - - 0.0000000003787 72.0
MMD1_k127_3636800_3 pfam nudix - - - 0.0000000347 58.0
MMD1_k127_3649686_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 340.0
MMD1_k127_3649686_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000006103 252.0
MMD1_k127_3649686_2 Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000002422 203.0
MMD1_k127_3658815_0 Yqey-like protein K09117 - - 0.00000000000000000000000000005002 122.0
MMD1_k127_3658815_1 histidyl-tRNA synthetase K01892 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 6.1.1.21 0.000000000000004286 78.0
MMD1_k127_3682111_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 455.0
MMD1_k127_3717616_0 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000007287 167.0
MMD1_k127_3717616_1 methyltransferase - - - 0.000000000000000000000003968 113.0
MMD1_k127_3717616_2 BNR/Asp-box repeat - - - 0.0002395 53.0
MMD1_k127_3725860_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 371.0
MMD1_k127_3725860_1 TIGRFAM daunorubicin resistance ABC transporter, inner membrane subunit B K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 308.0
MMD1_k127_3725860_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007376 267.0
MMD1_k127_3725860_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000117 137.0
MMD1_k127_3725860_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000007453 104.0
MMD1_k127_3753570_0 Histidine kinase - - - 0.000000000000000000000000000000000000000002303 173.0
MMD1_k127_3755841_0 Thioredoxin - - - 0.00000000000000000000000000009344 125.0
MMD1_k127_3755841_1 WD40-like Beta Propeller Repeat K03641,K08676 - - 0.00000000004363 75.0
MMD1_k127_3771849_0 PFAM E1-E2 ATPase-associated domain protein, Haloacid dehalogenase domain protein hydrolase, cation transporting ATPase domain protein K01531 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 372.0
MMD1_k127_377674_0 methyltransferase - - - 0.000000000000000000000000000000000003046 143.0
MMD1_k127_3803806_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 379.0
MMD1_k127_3803806_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000001791 268.0
MMD1_k127_381966_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000001611 209.0
MMD1_k127_381966_1 Papain family cysteine protease K11751,K14647 - 3.1.3.5,3.6.1.45 0.0001182 54.0
MMD1_k127_3830427_0 adenylosuccinate lyase K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000006645 256.0
MMD1_k127_3830427_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0000287,GO:0003674,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019752,GO:0034641,GO:0042558,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0046653,GO:0046872,GO:0051186,GO:0071704,GO:1901360,GO:1901564 2.1.2.2 0.00000000000000000000000000000000000000000000000000005613 194.0
MMD1_k127_3830427_2 SAICAR synthetase - - - 0.00000000000000000000000000000000000000000000001816 183.0
MMD1_k127_3837935_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000131 212.0
MMD1_k127_3837935_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000006976 147.0
MMD1_k127_385420_0 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions - GO:0003674,GO:0003824,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111 - 0.00000003593 61.0
MMD1_k127_3872069_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 2.125e-275 886.0
MMD1_k127_3872069_1 Restriction endonuclease PvuII K01155 - 3.1.21.4 0.0000000003988 61.0
MMD1_k127_3877514_0 PFAM glycosidase related protein - - - 0.000000000000000000001885 104.0
MMD1_k127_3900144_0 phosphatidate phosphatase activity K03975,K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 421.0
MMD1_k127_3900144_1 prohibitin homologues - - - 0.00000000000000000000003872 106.0
MMD1_k127_3914433_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.11e-321 1004.0
MMD1_k127_3914433_1 Clp protease - - - 0.000000000000367 78.0
MMD1_k127_3959202_0 Pilus assembly protein K02662 - - 0.000000000004651 78.0
MMD1_k127_3966670_0 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04068 - 1.97.1.4 0.0000000000000000000000000000000002354 141.0
MMD1_k127_3968547_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 566.0
MMD1_k127_3968547_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0017076,GO:0030234,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0044464,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071496,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000001104 94.0
MMD1_k127_3968547_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000003315 56.0
MMD1_k127_3984967_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000008645 203.0
MMD1_k127_3984967_1 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000004518 160.0
MMD1_k127_3984967_2 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000001098 91.0
MMD1_k127_3987182_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000003633 147.0
MMD1_k127_4107036_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 458.0
MMD1_k127_4107036_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000005144 93.0
MMD1_k127_4117564_0 pilus assembly protein PilM K02662 - - 0.0000007645 62.0
MMD1_k127_4167955_0 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001372 252.0
MMD1_k127_4167955_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000395 46.0
MMD1_k127_4187178_0 LemA family K03744 - - 0.000000000000000000000000000000000000000000002413 171.0
MMD1_k127_4187178_1 - - - - 0.0000000000000000000000000000000000000000000177 175.0
MMD1_k127_4187178_2 ABC transporter K01990 - - 0.0000000000000000001066 89.0
MMD1_k127_4207576_0 Hep Hag repeat protein - - - 0.0000004459 59.0
MMD1_k127_4224216_0 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000003341 222.0
MMD1_k127_4224216_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000009378 161.0
MMD1_k127_4224216_2 Vitamin k epoxide reductase - - - 0.00000000000000000002558 96.0
MMD1_k127_4224216_3 Putative ATP-binding cassette K01992 - - 0.0003843 49.0
MMD1_k127_4246022_0 - - - - 0.000000000000000001085 91.0
MMD1_k127_4246022_1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.000000000000000002774 96.0
MMD1_k127_425093_0 3-demethylubiquinone-9 3-O-methyltransferase activity K00694,K11936,K20541 - 2.4.1.12 0.000000000000000000049 99.0
MMD1_k127_425093_1 Glycosyltransferase like family 2 - - - 0.000000000000000004758 83.0
MMD1_k127_425093_2 Small Multidrug Resistance protein - - - 0.0000000000009715 73.0
MMD1_k127_4276981_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 406.0
MMD1_k127_4276981_1 COG1994 Zn-dependent proteases - - - 0.00000000000000000000000000000000000000000000001681 184.0
MMD1_k127_4276981_2 - - - - 0.0000005488 59.0
MMD1_k127_4284423_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000005336 144.0
MMD1_k127_4284423_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000006349 90.0
MMD1_k127_4284423_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000003349 51.0
MMD1_k127_4294511_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 475.0
MMD1_k127_4294511_1 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 457.0
MMD1_k127_4306843_0 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000003479 222.0
MMD1_k127_4306843_1 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000281 88.0
MMD1_k127_4307627_0 Opacity-associated protein A LysM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001381 254.0
MMD1_k127_4307627_1 phosphoribosyltransferase K07100 - - 0.000000000000000000000000000000000000000000000000000000000000007006 223.0
MMD1_k127_4307627_2 PFAM peptidase M16 domain protein - - - 0.0000000000000000000000000001959 126.0
MMD1_k127_431943_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000001761 66.0
MMD1_k127_4325414_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000001271 69.0
MMD1_k127_4332246_0 Transcriptional regulator - - - 0.000000000001379 77.0
MMD1_k127_4332528_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000001227 174.0
MMD1_k127_4332528_1 DoxX - - - 0.0000268 53.0
MMD1_k127_4339199_0 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.00000000000000000000000000000000000000000079 173.0
MMD1_k127_4352980_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000002368 63.0
MMD1_k127_4353043_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 388.0
MMD1_k127_4353043_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 363.0
MMD1_k127_4353043_2 Hexapeptide repeat of succinyl-transferase K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000001026 139.0
MMD1_k127_4353043_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000003732 112.0
MMD1_k127_4353043_4 Binds the 23S rRNA K02909 - - 0.000000000000000000002895 96.0
MMD1_k127_4362582_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 529.0
MMD1_k127_4373662_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 404.0
MMD1_k127_4373662_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001151 272.0
MMD1_k127_4373662_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000001242 212.0
MMD1_k127_4377002_0 AMP-binding enzyme K01897 - 6.2.1.3 1.762e-198 636.0
MMD1_k127_4377002_1 - - - - 0.000000000000000000000000003361 114.0
MMD1_k127_4377002_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000001183 86.0
MMD1_k127_439433_0 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 308.0
MMD1_k127_439433_1 Domain present in PSD-95, Dlg, and ZO-1/2. K08372 GO:0000785,GO:0001101,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008236,GO:0008630,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009894,GO:0009898,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010467,GO:0010506,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016485,GO:0016540,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030162,GO:0030163,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031329,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031984,GO:0032268,GO:0032270,GO:0032526,GO:0032991,GO:0033043,GO:0033554,GO:0033993,GO:0034097,GO:0034599,GO:0034605,GO:0035456,GO:0035458,GO:0035556,GO:0035631,GO:0042175,GO:0042221,GO:0042802,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043235,GO:0043280,GO:0043281,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045786,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051604,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070206,GO:0070207,GO:0070848,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071345,GO:0071363,GO:0071396,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097190,GO:0097193,GO:0097194,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098802,GO:0098827,GO:0140096,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902494,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903201,GO:1903202,GO:1905286,GO:1905368,GO:1905369,GO:1905370,GO:2000116,GO:2001056,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001238,GO:2001239,GO:2001241,GO:2001242,GO:2001243,GO:2001267,GO:2001269 - 0.000003798 58.0
MMD1_k127_439433_2 Bacterial PH domain - - - 0.000009276 56.0
MMD1_k127_4396448_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 400.0
MMD1_k127_4396448_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000001527 262.0
MMD1_k127_4415682_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K01317 - 3.4.21.10 0.000000000000000000000000000000001074 139.0
MMD1_k127_4415682_1 PFAM response regulator receiver K07657 - - 0.0000000000000000000001271 104.0
MMD1_k127_4474916_0 dUTP biosynthetic process K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001724 256.0
MMD1_k127_4474916_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000001782 86.0
MMD1_k127_4474916_2 Transcriptional regulator, TrmB - - - 0.00000000000004624 81.0
MMD1_k127_4493313_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.033e-248 794.0
MMD1_k127_4493313_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 552.0
MMD1_k127_4493313_2 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000144 172.0
MMD1_k127_4493313_3 Metal-sensitive transcriptional repressor - - - 0.0000000000001168 76.0
MMD1_k127_4513396_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.533e-232 741.0
MMD1_k127_4559687_0 oligoendopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 538.0
MMD1_k127_4559687_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 523.0
MMD1_k127_4559687_2 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000002328 169.0
MMD1_k127_4559687_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000006431 132.0
MMD1_k127_4589046_0 Beta propeller domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 485.0
MMD1_k127_4589046_1 TIGRFAM bacteriochlorophyll chlorophyll synthetase K04040 - 2.5.1.133,2.5.1.62 0.000000128 64.0
MMD1_k127_4595326_0 histidyl-tRNA aminoacylation K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 390.0
MMD1_k127_4595326_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000004951 84.0
MMD1_k127_4597511_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 1.547e-235 747.0
MMD1_k127_4599019_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 513.0
MMD1_k127_4599019_1 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 364.0
MMD1_k127_4599019_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 315.0
MMD1_k127_4599019_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000007914 147.0
MMD1_k127_4603996_0 AAA-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 389.0
MMD1_k127_4603996_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000002263 237.0
MMD1_k127_4603996_2 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000007674 198.0
MMD1_k127_4603996_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000001026 111.0
MMD1_k127_4603996_4 competence protein - - - 0.0000000000000000014 95.0
MMD1_k127_4603996_6 Amidohydrolase K07045 - - 0.0000000715 55.0
MMD1_k127_460863_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000005993 241.0
MMD1_k127_460863_1 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.0000001618 63.0
MMD1_k127_4623081_0 Metallo-peptidase family M12B Reprolysin-like - - - 0.0001111 54.0
MMD1_k127_463230_0 Protein of unknown function (DUF475) K09799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 340.0
MMD1_k127_4686378_0 Cellulose synthase K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 384.0
MMD1_k127_4698808_0 Domain of unknown function (DUF4215) - - - 0.00000000000000000000317 113.0
MMD1_k127_4698808_1 ig-like, plexins, transcription factors - - - 0.00000001321 71.0
MMD1_k127_4728322_0 self proteolysis - - - 0.0000000000000000001356 102.0
MMD1_k127_4728322_1 protein import K08651 - 3.4.21.66 0.0000000000007854 80.0
MMD1_k127_4728322_2 PFAM GtrA family protein - - - 0.0000001147 57.0
MMD1_k127_4729703_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000001097 121.0
MMD1_k127_4729703_1 COGs COG1432 conserved - - - 0.0000000000000151 81.0
MMD1_k127_473918_0 PFAM chemotaxis K03406,K07216 - - 0.000000000000008873 79.0
MMD1_k127_4760195_0 cell division ATP-binding protein FtsE K09812 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000001118 171.0
MMD1_k127_4760195_1 FtsX-like permease family K09811 - - 0.0000000000000000001657 100.0
MMD1_k127_4760195_2 - - - - 0.000000000000001015 78.0
MMD1_k127_4788292_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 484.0
MMD1_k127_4788292_1 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 309.0
MMD1_k127_4788292_2 Transketolase, pyrimidine binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 290.0
MMD1_k127_4788292_3 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000005128 139.0
MMD1_k127_4788292_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.000000000000000000000000000003494 130.0
MMD1_k127_4799691_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 343.0
MMD1_k127_4799691_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001526 293.0
MMD1_k127_4799691_2 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000313 272.0
MMD1_k127_4799691_3 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000029 218.0
MMD1_k127_4799691_4 SpoU rRNA Methylase family - - - 0.0000000000000000000000000000000000005549 145.0
MMD1_k127_4799691_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000003587 125.0
MMD1_k127_4805608_0 Polysaccharide deacetylase K22278 GO:0005575,GO:0016020 3.5.1.104 0.00000000000000000000000000000000000000000000000000008067 194.0
MMD1_k127_4805608_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000001623 190.0
MMD1_k127_4805608_2 phosphopantothenoylcysteine decarboxylase activity K01598,K13038,K21977 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000006935 173.0
MMD1_k127_4805608_3 Phosphopantothenoylcysteine decarboxylase K01598 GO:0003674,GO:0003824,GO:0004633,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.36 0.0000000000000000000000000000000000000007878 159.0
MMD1_k127_4807221_0 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000001427 99.0
MMD1_k127_4807221_1 histidine kinase-, DNA gyrase B - - - 0.000003514 54.0
MMD1_k127_4807221_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00001406 53.0
MMD1_k127_4816696_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 396.0
MMD1_k127_4816696_1 Protein-disulfide isomerase - - - 0.00000000000000000000000000000006412 132.0
MMD1_k127_4827151_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000008108 271.0
MMD1_k127_4827151_1 Hydrolase, P-loop family K06925 - - 0.00000000000000000004293 96.0
MMD1_k127_4827151_2 PFAM VanW like protein - - - 0.0000000000000000005288 91.0
MMD1_k127_4837546_0 polygalacturonase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 419.0
MMD1_k127_4837546_1 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007169 252.0
MMD1_k127_4837546_2 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000003875 183.0
MMD1_k127_4837546_3 beta-galactosidase activity K01219,K21000 - 3.2.1.81 0.000000000000000000000000000000000000004347 161.0
MMD1_k127_4845742_0 - - - - 0.000000000000000000000000000000000000000000000004233 187.0
MMD1_k127_4845742_1 Trypsin K08070 - 1.3.1.74 0.0006363 46.0
MMD1_k127_4858676_0 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.0000000003097 74.0
MMD1_k127_4858676_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000007853 66.0
MMD1_k127_4865461_0 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000000000003156 222.0
MMD1_k127_4865461_1 Inhibitor of apoptosis-promoting Bax1 - - - 0.000000000000000000000005212 112.0
MMD1_k127_4875508_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000127 122.0
MMD1_k127_4875508_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000002802 121.0
MMD1_k127_4875508_2 protein conserved in bacteria - - - 0.00000000000000001779 94.0
MMD1_k127_4895578_0 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000003512 139.0
MMD1_k127_4895578_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000002237 105.0
MMD1_k127_4895578_2 PFAM Stage II sporulation K06381 - - 0.0000000000004059 83.0
MMD1_k127_4896716_0 - - - - 0.000000000000000000000000000000000000127 148.0
MMD1_k127_4932834_0 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000001043 199.0
MMD1_k127_4932834_1 ABC-type Mn2 Zn2 transport systems permease components K09816 - - 0.00000000000000000000000000000000000000000000000003714 188.0
MMD1_k127_4932834_2 Restriction endonuclease - - - 0.000000000000000000000000000000000000000000003738 175.0
MMD1_k127_4932834_3 COG1121 ABC-type Mn Zn transport systems ATPase component K09817 - - 0.0000000000000000000000000000000000000000004727 167.0
MMD1_k127_4932834_4 Belongs to the bacterial solute-binding protein 9 family K09815,K09818 - - 0.000000000000000000000000000000000001102 151.0
MMD1_k127_4940940_0 O-Methyltransferase - - - 0.000000000000000000002518 101.0
MMD1_k127_4940940_1 Belongs to the peptidase S8 family - - - 0.000000000003027 82.0
MMD1_k127_4940940_2 translation initiation factor activity - - - 0.00001904 59.0
MMD1_k127_4940940_3 Aminoglycoside phosphotransferase - - - 0.000238 52.0
MMD1_k127_4954795_0 glycosyl transferase group 1 K13668 - 2.4.1.346 0.000000000000000000000000000000000000000000000000000000000382 216.0
MMD1_k127_4954795_1 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000000000002086 191.0
MMD1_k127_4954795_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000002523 114.0
MMD1_k127_497353_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000001291 161.0
MMD1_k127_497353_1 Putative ATP-binding cassette K01992 - - 0.000000004655 68.0
MMD1_k127_4980865_0 (Rieske (2Fe-2S) domain) K00363 - 1.7.1.15 0.00000000000000000001355 96.0
MMD1_k127_4980865_1 Oxidoreductase NAD-binding domain - - - 0.000001035 59.0
MMD1_k127_498261_0 AAA domain K14680 - 6.5.1.3 0.0000000000000000000000000000001036 138.0
MMD1_k127_4983181_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 514.0
MMD1_k127_4983181_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000001779 94.0
MMD1_k127_5071014_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 3.908e-313 980.0
MMD1_k127_5071014_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 427.0
MMD1_k127_5071014_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000009691 56.0
MMD1_k127_5083650_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000001344 152.0
MMD1_k127_5083650_1 Protein of unknown function (DUF2723) K14340 - - 0.000000000000003864 89.0
MMD1_k127_5083650_2 Protein of unknown function (DUF2723) - - - 0.0002472 52.0
MMD1_k127_5085513_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1126.0
MMD1_k127_5085513_1 nucleoside triphosphate catabolic process K01776,K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 0.0000000000000000000000000000000000000000006431 166.0
MMD1_k127_5085513_2 heme binding K21471,K21472 - - 0.00000000000000005156 93.0
MMD1_k127_5085513_3 - - - - 0.0003971 52.0
MMD1_k127_5115031_0 Major facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000003767 250.0
MMD1_k127_5115031_1 - - - - 0.00000000000000000000001626 101.0
MMD1_k127_5125528_0 Cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000491 236.0
MMD1_k127_5125528_1 Protein of unknown function (DUF4012) - - - 0.00000005173 64.0
MMD1_k127_5138802_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.000000000000001575 83.0
MMD1_k127_5138802_1 Polymerase - - - 0.0000005633 62.0
MMD1_k127_5145572_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000002046 199.0
MMD1_k127_5145572_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000001624 183.0
MMD1_k127_5145572_3 - - - - 0.00000000000000000000000000000000008895 142.0
MMD1_k127_5145572_4 - - - - 0.000000000000000000000000002906 124.0
MMD1_k127_5152496_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000001477 226.0
MMD1_k127_5152496_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000001976 169.0
MMD1_k127_5152496_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein K07636 - 2.7.13.3 0.000000000000000002043 87.0
MMD1_k127_5157255_0 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000006512 213.0
MMD1_k127_5157255_1 Belongs to the peptidase S11 family K07262 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000004101 133.0
MMD1_k127_5157255_2 Cupin 2, conserved barrel domain protein - - - 0.000002353 55.0
MMD1_k127_517799_0 membrane-associated protein domain - - - 0.00000000000000874 79.0
MMD1_k127_517799_1 Transglutaminase-like domain - - - 0.00000000000005006 80.0
MMD1_k127_517799_2 xyloglucan:xyloglucosyl transferase activity - - - 0.000002492 57.0
MMD1_k127_5196171_0 Bacterial Ig-like domain 2 - - - 0.0000000000000000000004829 110.0
MMD1_k127_520927_0 Type II IV secretion system protein K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 386.0
MMD1_k127_520927_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000018 183.0
MMD1_k127_520927_3 cheY-homologous receiver domain - - - 0.00000000000000811 79.0
MMD1_k127_520927_4 General secretion pathway protein F K02455,K02653 - - 0.000007593 56.0
MMD1_k127_5232806_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1125.0
MMD1_k127_5232806_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000002414 209.0
MMD1_k127_5232806_2 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000001331 55.0
MMD1_k127_5232806_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.000005458 52.0
MMD1_k127_526875_0 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000001375 267.0
MMD1_k127_526875_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000004651 140.0
MMD1_k127_526875_2 NUDIX domain - - - 0.000000000000000003512 94.0
MMD1_k127_526875_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000002848 79.0
MMD1_k127_527181_0 - - - - 0.0000000000000000833 95.0
MMD1_k127_5272470_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004306 284.0
MMD1_k127_5272470_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000002637 241.0
MMD1_k127_5272470_2 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000002357 166.0
MMD1_k127_5304043_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.948e-215 691.0
MMD1_k127_5327575_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.237e-212 684.0
MMD1_k127_5327575_1 NYN domain - - - 0.000000000000000000000000000000000000000000001083 174.0
MMD1_k127_5330149_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 421.0
MMD1_k127_5330149_1 prephenate dehydrogenase (NADP+) activity K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000114 168.0
MMD1_k127_5330149_2 - - - - 0.000000000000007243 84.0
MMD1_k127_5330149_3 - - - - 0.000393 48.0
MMD1_k127_533881_0 PFAM AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006049 273.0
MMD1_k127_533881_1 HD domain K07023 - - 0.0000000000000000003043 92.0
MMD1_k127_5342560_0 nucleotide-excision repair K03702,K08999 - - 4.742e-252 797.0
MMD1_k127_5342560_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.13e-221 713.0
MMD1_k127_5342560_2 PFAM RNA-metabolising metallo-beta-lactamase K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 356.0
MMD1_k127_5342560_3 beta-glucosidase activity K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 339.0
MMD1_k127_5342560_4 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 294.0
MMD1_k127_5342560_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000005254 227.0
MMD1_k127_5342560_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557,K03215 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.190,2.1.1.35 0.0000000000000000000000003607 112.0
MMD1_k127_5342560_7 Rhodanese Homology Domain - - - 0.000000006529 63.0
MMD1_k127_5364005_0 GTP-binding protein K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
MMD1_k127_5364005_1 phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006098 269.0
MMD1_k127_5364005_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001329 272.0
MMD1_k127_5364005_3 PFAM extracellular solute-binding protein family 1 K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000012 254.0
MMD1_k127_5364005_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000001252 237.0
MMD1_k127_5364005_5 cobw domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000001077 207.0
MMD1_k127_5364005_6 Phosphate uptake regulator - - - 0.0000000000000000000000000000009406 132.0
MMD1_k127_5374170_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001372 288.0
MMD1_k127_5374170_1 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000001282 174.0
MMD1_k127_5374170_2 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000002105 117.0
MMD1_k127_5374170_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000004045 115.0
MMD1_k127_5374170_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000001357 90.0
MMD1_k127_538937_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007764 473.0
MMD1_k127_538937_1 Phosphoglycerate kinase K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.000000000000000000000000000000002336 134.0
MMD1_k127_538937_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000003202 77.0
MMD1_k127_5396747_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000542 89.0
MMD1_k127_5397413_0 Polysaccharide deacetylase - - - 0.000000000000000000000000000000001556 147.0
MMD1_k127_540783_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 292.0
MMD1_k127_540783_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000001177 233.0
MMD1_k127_540783_10 Polysaccharide biosynthesis protein - - - 0.0004845 45.0
MMD1_k127_540783_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000006455 193.0
MMD1_k127_540783_3 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000008316 151.0
MMD1_k127_540783_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000001151 147.0
MMD1_k127_540783_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000007527 137.0
MMD1_k127_540783_6 Ribosomal protein S9/S16 K02996 - - 0.0000000000000000000000000000000002553 139.0
MMD1_k127_540783_7 Ribosomal protein L17 K02879,K16193 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000005438 111.0
MMD1_k127_540783_8 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000001392 102.0
MMD1_k127_540783_9 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000007779 66.0
MMD1_k127_5412767_0 -O-antigen K18814 - - 0.00000000000000000001886 103.0
MMD1_k127_5412767_1 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000003824 98.0
MMD1_k127_54234_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003471 233.0
MMD1_k127_5429725_0 AAA domain (dynein-related subfamily) K03924 - - 0.0000000000000000000001014 110.0
MMD1_k127_5429725_1 von Willebrand factor, type A - - - 0.000000007904 67.0
MMD1_k127_5463584_0 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 490.0
MMD1_k127_5463584_1 Belongs to the peptidase M48B family K03799 - - 0.000000003735 58.0
MMD1_k127_5471402_0 Filamentation induced by cAMP protein fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001078 267.0
MMD1_k127_5471402_1 ankyrin repeats - - - 0.0000000000000000000000000000000000000000000000000000008881 200.0
MMD1_k127_5471402_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000001958 163.0
MMD1_k127_5471402_3 Histidine kinase K03406,K21470 - - 0.0000000000000002666 90.0
MMD1_k127_5471402_4 - - - - 0.000000001591 69.0
MMD1_k127_5471402_5 STAS-like domain of unknown function (DUF4325) - - - 0.00000005864 59.0
MMD1_k127_5471402_6 Appr-1'-p processing enzyme - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0005631 49.0
MMD1_k127_5486643_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234 2.7.7.6 1.215e-235 754.0
MMD1_k127_5497847_0 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 327.0
MMD1_k127_5497847_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000003336 101.0
MMD1_k127_5505721_0 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000001289 118.0
MMD1_k127_5505721_1 protein conserved in bacteria - - - 0.000000000000000002282 93.0
MMD1_k127_5505721_2 membrane-associated protein domain - - - 0.00000000000003287 81.0
MMD1_k127_5513716_0 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 482.0
MMD1_k127_5513716_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000003291 240.0
MMD1_k127_5513716_2 - - - - 0.0000000000000000000000000005325 127.0
MMD1_k127_5513716_3 D-alanyl-D-alanine carboxypeptidase K17733 - - 0.0000000000000002178 87.0
MMD1_k127_5513716_4 ABC-type uncharacterized transport system - - - 0.0000002235 62.0
MMD1_k127_5523949_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000002218 226.0
MMD1_k127_5523949_1 oligosaccharyl transferase activity - - - 0.000006082 55.0
MMD1_k127_5523949_2 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.00005419 51.0
MMD1_k127_5533478_0 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009987,GO:0009991,GO:0016036,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0034654,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 380.0
MMD1_k127_5533478_1 - - - - 0.00000000000000000000000000005161 120.0
MMD1_k127_5533478_2 - - - - 0.00000000000000000006829 94.0
MMD1_k127_5533478_3 membrane-bound metal-dependent K07038 - - 0.0000000000000000007247 95.0
MMD1_k127_5539081_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 351.0
MMD1_k127_5539081_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000002885 214.0
MMD1_k127_5539081_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000001709 186.0
MMD1_k127_5539081_3 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.000000000000000000000000000000000000000001158 160.0
MMD1_k127_5539081_4 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000003117 101.0
MMD1_k127_5539081_5 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.000000000000000001888 91.0
MMD1_k127_5539081_6 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000001829 83.0
MMD1_k127_5539081_7 RHS Repeat - - - 0.0000000000003215 80.0
MMD1_k127_5584473_0 domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000002232 157.0
MMD1_k127_5584473_1 Trypsin - - - 0.0006604 49.0
MMD1_k127_5598690_0 PFAM Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 446.0
MMD1_k127_5598690_1 Type II secretion system (T2SS), protein F K02653 - - 0.00000000000000000000000000000000000000000000008251 179.0
MMD1_k127_5613590_0 cell wall surface anchor family protein - - - 0.00000003844 66.0
MMD1_k127_5613590_1 cell wall surface anchor family protein - - - 0.00000005078 66.0
MMD1_k127_566596_0 - - - - 0.000001234 61.0
MMD1_k127_5672730_0 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 433.0
MMD1_k127_5672730_1 PGAP1-like protein - - - 0.0000000007864 63.0
MMD1_k127_5678040_0 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000001292 134.0
MMD1_k127_5678040_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000008195 57.0
MMD1_k127_5701076_0 Haloacid dehalogenase domain protein hydrolase, type 3 - - - 0.00002735 50.0
MMD1_k127_5701076_1 DEAD DEAH box helicase domain protein K06877 - - 0.0002651 49.0
MMD1_k127_5743598_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 399.0
MMD1_k127_5743598_1 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.0004185 47.0
MMD1_k127_5753978_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K01535 - 3.6.3.2,3.6.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 607.0
MMD1_k127_579624_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000004597 91.0
MMD1_k127_579624_1 Putative peptidoglycan binding domain - - - 0.0000004173 61.0
MMD1_k127_5796807_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 296.0
MMD1_k127_5796807_1 PFAM UBA THIF-type NAD FAD binding protein K03148 - 2.7.7.73 0.0000003456 61.0
MMD1_k127_5826070_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 421.0
MMD1_k127_5826070_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 340.0
MMD1_k127_584010_0 Large extracellular alpha-helical protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 615.0
MMD1_k127_584010_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 298.0
MMD1_k127_584010_2 Memo-like protein K06990 - - 0.00000000000000000000001225 114.0
MMD1_k127_600070_0 PFAM AAA ATPase central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 457.0
MMD1_k127_600070_1 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933 343.0
MMD1_k127_600070_2 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000001197 186.0
MMD1_k127_600070_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000008206 70.0
MMD1_k127_606344_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000001504 216.0
MMD1_k127_606344_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000007202 135.0
MMD1_k127_634213_0 twitching motility protein K02669 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000001236 240.0
MMD1_k127_634213_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000001872 160.0
MMD1_k127_634213_2 PFAM response regulator receiver - - - 0.000000000000000000006699 97.0
MMD1_k127_634213_3 PFAM response regulator receiver K07657,K07658 - - 0.0000000000000000000261 96.0
MMD1_k127_634213_4 type II secretion system protein E K02243,K02652 - - 0.00000001764 59.0
MMD1_k127_664600_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.677e-208 661.0
MMD1_k127_664600_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000106 210.0
MMD1_k127_664600_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000009762 175.0
MMD1_k127_664600_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000654 62.0
MMD1_k127_664600_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000002001 56.0
MMD1_k127_664600_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00005243 51.0
MMD1_k127_679866_0 FemAB family K05363,K11693 - 2.3.2.10,2.3.2.16 0.000000000000000000000000000000000001303 153.0
MMD1_k127_679866_1 Nucleotidyltransferase K09962 - - 0.000000000000000000000000000002471 123.0
MMD1_k127_680284_0 Predicted membrane protein (DUF2079) - - - 0.00000000000007803 85.0
MMD1_k127_699303_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 436.0
MMD1_k127_699303_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000001232 54.0
MMD1_k127_699303_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0001219 51.0
MMD1_k127_70210_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 325.0
MMD1_k127_70210_1 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000001182 70.0
MMD1_k127_70210_2 PFAM Archease protein family (DUF101 UPF0211) - - - 0.0002609 48.0
MMD1_k127_718881_0 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000001725 128.0
MMD1_k127_751708_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 547.0
MMD1_k127_753919_0 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.0000000000000000000000000007117 123.0
MMD1_k127_753919_1 nucleotidyltransferase activity - - - 0.0000000001319 71.0
MMD1_k127_764128_0 GTP-binding protein TypA K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 411.0
MMD1_k127_764128_1 - - - - 0.0001282 46.0
MMD1_k127_774548_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 355.0
MMD1_k127_774548_1 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008203 243.0
MMD1_k127_774548_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.0000000000000000000000001224 123.0
MMD1_k127_774548_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 0.00000000000003001 78.0
MMD1_k127_774548_4 TPM domain K06872 - - 0.00002731 56.0
MMD1_k127_777392_0 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000002668 204.0
MMD1_k127_777392_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000008123 151.0
MMD1_k127_802932_0 Domain of unknown function (DUF4419) - - - 0.000000000000000000000000000000000000000000000000004826 197.0
MMD1_k127_802932_1 Periplasmic Protein K09914 - - 0.000000000000001979 81.0
MMD1_k127_843010_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 406.0
MMD1_k127_843010_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000455 167.0
MMD1_k127_843010_2 domain, Protein - - - 0.000007415 59.0
MMD1_k127_84424_0 TIGRFAM nicotinamide mononucleotide transporter PnuC K03811 - - 0.000000000000000000000000000000000000000000000000000000000000000000643 237.0
MMD1_k127_84424_1 AAA domain - - - 0.0000000000000000000000000004044 115.0
MMD1_k127_84424_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000001359 98.0
MMD1_k127_876150_0 ISXO2-like transposase domain - - - 0.000000001245 67.0
MMD1_k127_876150_1 IPT/TIG domain - - - 0.00000393 59.0
MMD1_k127_905555_0 TIGRFAM SUF system FeS cluster assembly, SufB K07033,K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 544.0
MMD1_k127_905555_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000003125 60.0
MMD1_k127_982746_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000002868 202.0
MMD1_k127_982746_1 PAS domain - - - 0.000000000000000000000007143 119.0
MMD1_k127_987453_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 432.0
MMD1_k127_987453_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 330.0
MMD1_k127_987453_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000003908 190.0
MMD1_k127_987453_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000003052 176.0
MMD1_k127_987453_4 - - - - 0.00000003778 56.0