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Overview

ID MAG02353
Name MMD1_bin.6
Sample SMP0058
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class Thermodesulfovibrionia
Order Thermodesulfovibrionales
Family UBA6898
Genus UBA6898
Species
Assembly information
Completeness (%) 65.74
Contamination (%) 0.94
GC content (%) 54.0
N50 (bp) 4,862
Genome size (bp) 1,651,180

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1734

Gene name Description KEGG GOs EC E-value Score Sequence
MMD1_k127_1002830_0 PFAM FAD linked oxidase domain protein - - - 6.231e-251 779.0
MMD1_k127_1002830_1 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 580.0
MMD1_k127_1002830_2 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 466.0
MMD1_k127_1002830_3 Arginine-tRNA-protein transferase, N terminus K21420 - 2.3.2.29 0.000000000000000000000000000000000000000001894 166.0
MMD1_k127_1002830_4 ferredoxin-thioredoxin reductase activity - - - 0.00000000000000000000000000000000000000002175 156.0
MMD1_k127_1002830_5 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000009064 118.0
MMD1_k127_1002830_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191,K07390,K21636 - 1.1.98.6 0.0000000000000000003478 89.0
MMD1_k127_1012385_0 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 314.0
MMD1_k127_1012385_1 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000000002973 153.0
MMD1_k127_1012385_2 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000004049 83.0
MMD1_k127_1024811_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.336e-227 713.0
MMD1_k127_1024811_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 524.0
MMD1_k127_1024811_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000001494 118.0
MMD1_k127_1024811_3 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000001867 115.0
MMD1_k127_1036387_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 592.0
MMD1_k127_1036387_1 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000000000000000009769 171.0
MMD1_k127_1036387_2 Protein of unknown function (DUF1318) - - - 0.00001221 48.0
MMD1_k127_1045028_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1166.0
MMD1_k127_1045028_1 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 424.0
MMD1_k127_1045028_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 404.0
MMD1_k127_1045028_3 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 315.0
MMD1_k127_1045028_4 nickel cation binding K04651,K19640 - - 0.00000000000000000000000000002521 121.0
MMD1_k127_1045028_5 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000006002 109.0
MMD1_k127_1045028_6 Belongs to the peptidase M48B family K03799 - - 0.00000000000000003944 81.0
MMD1_k127_1045028_7 Tetratricopeptide repeat - - - 0.0000000000000359 81.0
MMD1_k127_1045028_9 - - - - 0.0004264 51.0
MMD1_k127_1062385_0 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000003427 245.0
MMD1_k127_1062385_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000006851 143.0
MMD1_k127_1062385_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000003846 103.0
MMD1_k127_1062385_3 cellulose binding K12132 - 2.7.11.1 0.0000001937 58.0
MMD1_k127_1062385_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0009726 42.0
MMD1_k127_1077645_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 421.0
MMD1_k127_1077645_1 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001477 268.0
MMD1_k127_1077645_2 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000291 205.0
MMD1_k127_1086814_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 362.0
MMD1_k127_1086814_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004832 281.0
MMD1_k127_1086814_2 Transcription termination factor nusG - - - 0.000000000000000000000000000000000000000007061 159.0
MMD1_k127_109523_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 456.0
MMD1_k127_109523_1 DivIVA protein K04074 - - 0.0000000000000000000000000000000000000000000000000000000001258 210.0
MMD1_k127_109523_2 YGGT family K02221 - - 0.0000000000000000000000000000000009118 132.0
MMD1_k127_109523_3 membrane - - - 0.00000000000000000000000002718 120.0
MMD1_k127_110_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.245e-210 656.0
MMD1_k127_110_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 311.0
MMD1_k127_110_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000007669 135.0
MMD1_k127_1115806_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.502e-240 753.0
MMD1_k127_1115806_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 418.0
MMD1_k127_1115806_10 - - - - 0.00000000000000000000839 93.0
MMD1_k127_1115806_12 Domain of unknown function (DUF4388) - - - 0.0000000000003315 72.0
MMD1_k127_1115806_13 Tetratricopeptide repeat - - - 0.0000008954 62.0
MMD1_k127_1115806_2 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 356.0
MMD1_k127_1115806_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000207 267.0
MMD1_k127_1115806_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000244 187.0
MMD1_k127_1115806_5 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000003599 176.0
MMD1_k127_1115806_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000002911 174.0
MMD1_k127_1115806_7 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000000000000000000000000002054 160.0
MMD1_k127_1115806_8 nuclease activity - - - 0.00000000000000000000000000000000000000002851 155.0
MMD1_k127_1115806_9 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000002447 130.0
MMD1_k127_1130716_0 6-phosphofructokinase activity K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 326.0
MMD1_k127_1130716_1 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000000000001344 172.0
MMD1_k127_1130716_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000005547 155.0
MMD1_k127_1130716_3 - - - - 0.00000000000000000000000000000002863 133.0
MMD1_k127_1130716_4 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.000000000000000000000001384 105.0
MMD1_k127_1130716_5 protein with SCP PR1 domains - - - 0.0000000000000000008653 89.0
MMD1_k127_1130716_6 - - - - 0.0000000000007571 71.0
MMD1_k127_113227_0 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 356.0
MMD1_k127_113227_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000001916 224.0
MMD1_k127_113227_2 Psort location Cytoplasmic, score K04720 - 4.1.1.81 0.000004253 54.0
MMD1_k127_1133836_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 418.0
MMD1_k127_1133836_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00001795 48.0
MMD1_k127_1136641_0 FAD binding domain K00394 - 1.8.99.2 7.747e-255 794.0
MMD1_k127_1136641_1 FAD dependent oxidoreductase K16885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 582.0
MMD1_k127_1136641_2 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0000000000000000000000000000000000000003237 151.0
MMD1_k127_1195799_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 298.0
MMD1_k127_1195799_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000995 224.0
MMD1_k127_1195799_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000612 183.0
MMD1_k127_1258656_0 PFAM Acetyl-CoA hydrolase transferase K18122 - - 1.823e-282 879.0
MMD1_k127_1258656_1 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 318.0
MMD1_k127_1258656_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000007324 207.0
MMD1_k127_1273154_0 Aminotransferase class I and II K14261 - - 6.445e-212 662.0
MMD1_k127_1273154_1 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 532.0
MMD1_k127_1273154_10 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008189 249.0
MMD1_k127_1273154_11 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000004205 241.0
MMD1_k127_1273154_12 Protein of unknown function DUF116 K09729 - - 0.00000000000000000000000000000000000000000000000000000000000002892 219.0
MMD1_k127_1273154_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000000000004689 203.0
MMD1_k127_1273154_14 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000000000000007357 185.0
MMD1_k127_1273154_15 OstA-like protein K09774 - - 0.0000000000000000000000000000000003526 136.0
MMD1_k127_1273154_16 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000001346 131.0
MMD1_k127_1273154_17 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000002149 107.0
MMD1_k127_1273154_18 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000001136 98.0
MMD1_k127_1273154_19 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000006774 55.0
MMD1_k127_1273154_2 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 504.0
MMD1_k127_1273154_3 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 435.0
MMD1_k127_1273154_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 335.0
MMD1_k127_1273154_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 323.0
MMD1_k127_1273154_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 306.0
MMD1_k127_1273154_7 PFAM ABC transporter related K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 290.0
MMD1_k127_1273154_8 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 289.0
MMD1_k127_1273154_9 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001238 279.0
MMD1_k127_1280785_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 474.0
MMD1_k127_1280785_1 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 317.0
MMD1_k127_1280785_2 Cobalt transport protein K02008 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001107 262.0
MMD1_k127_1280785_3 PDGLE domain K02007 - - 0.0000000000000000000000000000000000000000000000000000000006178 207.0
MMD1_k127_1280785_4 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000003267 178.0
MMD1_k127_1280785_5 MgtC family K07507 - - 0.0000000000000000000000000000000000002029 149.0
MMD1_k127_1280785_6 - - - - 0.0000000000000000418 85.0
MMD1_k127_1324534_0 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 355.0
MMD1_k127_1324534_1 MGS-like domain - - - 0.00000000000000000000000000000000000000000000000002664 187.0
MMD1_k127_1324534_2 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000000000000000000000005307 164.0
MMD1_k127_1324534_5 Metallo-beta-lactamase superfamily - - - 0.00003726 47.0
MMD1_k127_1334644_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0 1238.0
MMD1_k127_1334644_1 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1031.0
MMD1_k127_1334644_2 - - - - 0.00000000001345 66.0
MMD1_k127_1427276_0 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000007364 232.0
MMD1_k127_1468914_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 331.0
MMD1_k127_1468914_1 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 331.0
MMD1_k127_1468914_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000006132 53.0
MMD1_k127_1482953_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 9.721e-207 649.0
MMD1_k127_1482953_1 Metallopeptidase family M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001013 284.0
MMD1_k127_1482953_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000002635 239.0
MMD1_k127_1482953_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000001597 171.0
MMD1_k127_1489853_0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005896 456.0
MMD1_k127_1489853_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 439.0
MMD1_k127_1489853_10 Protein of unknown function (DUF507) - - - 0.0000000000000000000002072 101.0
MMD1_k127_1489853_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003879 256.0
MMD1_k127_1489853_3 SMART HNH nuclease K07451 - - 0.000000000000000000000000000000000000000002315 157.0
MMD1_k127_1489853_4 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000003115 152.0
MMD1_k127_1489853_5 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000003131 133.0
MMD1_k127_1489853_7 Protein of unknown function (DUF507) - - - 0.00000000000000000000000000001287 119.0
MMD1_k127_1489853_8 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000003218 114.0
MMD1_k127_1489853_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000002101 104.0
MMD1_k127_1510859_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 1.332e-296 927.0
MMD1_k127_1510859_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001053 272.0
MMD1_k127_1510859_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005258 286.0
MMD1_k127_1510859_3 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000007821 213.0
MMD1_k127_1510859_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000005805 126.0
MMD1_k127_1510859_5 - - - - 0.000000000000000000000000000001123 140.0
MMD1_k127_1514108_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 6.236e-258 813.0
MMD1_k127_1514108_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 7.338e-235 741.0
MMD1_k127_1514108_10 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000006408 228.0
MMD1_k127_1514108_11 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000008008 154.0
MMD1_k127_1514108_12 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000008709 139.0
MMD1_k127_1514108_13 Glu-tRNAGln amidotransferase C subunit K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000157 111.0
MMD1_k127_1514108_2 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 526.0
MMD1_k127_1514108_3 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 516.0
MMD1_k127_1514108_4 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 475.0
MMD1_k127_1514108_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 464.0
MMD1_k127_1514108_6 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 376.0
MMD1_k127_1514108_7 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 312.0
MMD1_k127_1514108_8 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000001753 254.0
MMD1_k127_1514108_9 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000038 231.0
MMD1_k127_1516763_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 355.0
MMD1_k127_1516763_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000002828 199.0
MMD1_k127_1516763_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000002236 112.0
MMD1_k127_1516763_3 DnaJ molecular chaperone homology domain - - - 0.000000001011 70.0
MMD1_k127_1518215_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 323.0
MMD1_k127_1518215_1 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009219 280.0
MMD1_k127_1532539_0 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 311.0
MMD1_k127_1532539_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000001785 175.0
MMD1_k127_1532539_2 Type II secretion system protein B K02451 - - 0.0000000000000000000002933 106.0
MMD1_k127_1539943_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000577 380.0
MMD1_k127_1539943_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000007597 223.0
MMD1_k127_1539943_2 methyltransferase activity - - - 0.0000000000000000000000000000000000000003132 156.0
MMD1_k127_1539943_3 SMART Cold shock protein K03704 - - 0.0000000000000000000000000005539 114.0
MMD1_k127_1539943_4 Translation Initiation Factor K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000001298 88.0
MMD1_k127_1596386_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 406.0
MMD1_k127_1597980_0 PFAM Cysteine-rich domain K08264 - 1.8.98.1 0.000000000000000000000000000000000000000000000000000000000000000000471 239.0
MMD1_k127_1597980_1 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.000000000000000000000000008912 113.0
MMD1_k127_1597980_2 PFAM Nitrate reductase gamma subunit - - - 0.000000000000000000003253 102.0
MMD1_k127_1604547_0 TRCF K03723 - - 1.048e-229 747.0
MMD1_k127_1604547_1 PAS domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004664 269.0
MMD1_k127_1604547_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000005778 156.0
MMD1_k127_1604547_3 - - - - 0.000000000006926 68.0
MMD1_k127_162630_0 Phosphoglycerate kinase K00927 - 2.7.2.3 7.493e-198 623.0
MMD1_k127_162630_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 501.0
MMD1_k127_162630_10 SurA N-terminal domain K03770 - 5.2.1.8 0.00000000000000000000000000000000002979 142.0
MMD1_k127_162630_11 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000001024 94.0
MMD1_k127_162630_12 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000002753 61.0
MMD1_k127_162630_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 486.0
MMD1_k127_162630_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 438.0
MMD1_k127_162630_4 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 364.0
MMD1_k127_162630_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 338.0
MMD1_k127_162630_6 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002608 235.0
MMD1_k127_162630_7 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000005134 210.0
MMD1_k127_162630_8 Peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000001824 188.0
MMD1_k127_162630_9 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000001164 169.0
MMD1_k127_1628302_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.491e-214 674.0
MMD1_k127_1628302_1 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000003964 257.0
MMD1_k127_1628302_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000118 105.0
MMD1_k127_1628302_3 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.00001427 48.0
MMD1_k127_1639648_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.91e-285 900.0
MMD1_k127_1639648_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 413.0
MMD1_k127_1639648_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 398.0
MMD1_k127_1639648_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000003767 173.0
MMD1_k127_1639648_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000001442 169.0
MMD1_k127_1639648_5 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000000000006177 154.0
MMD1_k127_1639648_6 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000002164 97.0
MMD1_k127_164264_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 1.049e-210 667.0
MMD1_k127_164264_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 473.0
MMD1_k127_164264_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 455.0
MMD1_k127_164264_3 DHHA2 domain K15986 - 3.6.1.1 0.0000000000000000000000000000000000213 139.0
MMD1_k127_164264_4 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000000004646 133.0
MMD1_k127_164264_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000001606 120.0
MMD1_k127_164264_6 - - - - 0.0000000000000000000000001124 107.0
MMD1_k127_164264_7 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000001092 98.0
MMD1_k127_164264_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000003157 80.0
MMD1_k127_164264_9 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000007102 69.0
MMD1_k127_1644130_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 473.0
MMD1_k127_1644130_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 456.0
MMD1_k127_1644130_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 409.0
MMD1_k127_1644130_3 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 327.0
MMD1_k127_1644130_4 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000005485 78.0
MMD1_k127_165608_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 377.0
MMD1_k127_165608_1 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 347.0
MMD1_k127_165608_2 metal ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000003246 240.0
MMD1_k127_165608_3 SMART Signal transduction response regulator, receiver domain - - - 0.0000000000000000000000000000000000000000000004803 177.0
MMD1_k127_165608_4 Archaea-specific editing domain of threonyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000005651 166.0
MMD1_k127_165608_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000001304 139.0
MMD1_k127_165608_6 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000001215 83.0
MMD1_k127_165608_7 Protein of unknown function (DUF2934) - - - 0.00014 47.0
MMD1_k127_1672389_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 529.0
MMD1_k127_1672389_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000006757 163.0
MMD1_k127_1672389_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000001664 103.0
MMD1_k127_168856_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 447.0
MMD1_k127_168856_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 418.0
MMD1_k127_168856_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 349.0
MMD1_k127_168856_3 Aspartyl-tRNA amidotransferase K09117 - - 0.0000000000000000000000000000000000001752 145.0
MMD1_k127_168856_4 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000002686 147.0
MMD1_k127_168856_5 Transcriptional regulator K11921,K19338 - - 0.00000000000000000000000000000000002612 134.0
MMD1_k127_168856_6 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000001932 92.0
MMD1_k127_168856_7 aldolase class II K01624 - 4.1.2.13 0.000000000000004927 74.0
MMD1_k127_16933_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000002942 263.0
MMD1_k127_16933_1 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000008691 196.0
MMD1_k127_1715178_0 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 370.0
MMD1_k127_1715178_1 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 361.0
MMD1_k127_1715178_2 JAB/MPN domain K21140 - 3.13.1.6 0.000000000000000000000000002089 115.0
MMD1_k127_1715178_3 Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000004288 96.0
MMD1_k127_1725676_0 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 434.0
MMD1_k127_1725676_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.00000000000000000000000000000000000000001254 160.0
MMD1_k127_1726180_0 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 537.0
MMD1_k127_1726180_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 340.0
MMD1_k127_1726180_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000004789 148.0
MMD1_k127_1740078_0 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 441.0
MMD1_k127_1740078_1 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 417.0
MMD1_k127_1740078_2 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 404.0
MMD1_k127_17456_0 Iron-sulfur cluster-binding domain K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 452.0
MMD1_k127_17456_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 314.0
MMD1_k127_17456_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000000000000000000000000000003194 231.0
MMD1_k127_17456_3 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000000000004688 100.0
MMD1_k127_17456_4 - - - - 0.0001157 50.0
MMD1_k127_1783179_0 Glycosyl hydrolase family 57 - - - 1.836e-230 736.0
MMD1_k127_1783179_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 371.0
MMD1_k127_1783179_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008265 275.0
MMD1_k127_1783179_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000002822 171.0
MMD1_k127_1783179_4 cell cycle K05589,K12065,K13052 - - 0.00000000005062 71.0
MMD1_k127_1787082_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - - 3.918e-300 928.0
MMD1_k127_1787082_1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000001457 102.0
MMD1_k127_1818535_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 505.0
MMD1_k127_1818535_1 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 314.0
MMD1_k127_1818535_2 Alginate export - - - 0.00001565 51.0
MMD1_k127_1818535_3 PBS lyase HEAT-like repeat - - - 0.00003679 52.0
MMD1_k127_1842549_0 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000015 160.0
MMD1_k127_1842549_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000001138 141.0
MMD1_k127_1842549_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000554 137.0
MMD1_k127_1842549_3 HEAT repeat - - - 0.0000000000000000000000003259 118.0
MMD1_k127_1842549_4 Chemotaxis sensory transducer - - - 0.0001371 52.0
MMD1_k127_1844853_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1169.0
MMD1_k127_1884979_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 404.0
MMD1_k127_1884979_1 3-beta hydroxysteroid dehydrogenase/isomerase family K10011,K12449 - 1.1.1.305,2.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008397 392.0
MMD1_k127_1884979_2 Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K13014 GO:0005575,GO:0008150,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0016020,GO:0042221,GO:0050896 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 368.0
MMD1_k127_1884979_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 300.0
MMD1_k127_1884979_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000832 80.0
MMD1_k127_1910837_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 477.0
MMD1_k127_1910837_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 490.0
MMD1_k127_1910837_2 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 460.0
MMD1_k127_1910837_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000004658 162.0
MMD1_k127_1910837_4 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000005442 157.0
MMD1_k127_1910837_5 cheY-homologous receiver domain - - - 0.000000000000001092 81.0
MMD1_k127_1932538_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003166 288.0
MMD1_k127_1932538_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000004463 169.0
MMD1_k127_1943112_0 Aconitase C-terminal domain K01681 - 4.2.1.3 2.463e-299 930.0
MMD1_k127_2036105_0 Belongs to the DEAD box helicase family K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 496.0
MMD1_k127_2036105_1 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 317.0
MMD1_k127_2036105_2 Pentapeptide repeat protein - - - 0.000000004475 63.0
MMD1_k127_2046088_0 2-methylcitrate dehydratase K01720 - 4.2.1.79 9.495e-257 797.0
MMD1_k127_2046088_1 also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity K01659 - 2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 574.0
MMD1_k127_2046088_2 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 441.0
MMD1_k127_206066_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 598.0
MMD1_k127_206066_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000103 224.0
MMD1_k127_206066_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000005559 244.0
MMD1_k127_20710_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 6.13e-322 1007.0
MMD1_k127_20710_1 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 555.0
MMD1_k127_20710_10 RecX family K03565 - - 0.0000006526 57.0
MMD1_k127_20710_11 ATP synthase, subunit b - - - 0.0001465 48.0
MMD1_k127_20710_12 - - - - 0.0001879 47.0
MMD1_k127_20710_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 499.0
MMD1_k127_20710_3 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 497.0
MMD1_k127_20710_4 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 433.0
MMD1_k127_20710_5 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001875 272.0
MMD1_k127_20710_6 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000001092 197.0
MMD1_k127_20710_7 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.00000000000000000000000000000000001714 142.0
MMD1_k127_20710_8 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000001293 118.0
MMD1_k127_20710_9 Gram-negative-bacterium-type cell outer membrane assembly K04064,K06186 GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0050896 - 0.000000000000000000000008015 106.0
MMD1_k127_207374_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1015.0
MMD1_k127_207374_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 7.805e-293 907.0
MMD1_k127_207374_2 Dehydratase family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009885 387.0
MMD1_k127_207374_3 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000007626 257.0
MMD1_k127_207374_4 Ubiquinol--cytochrome c reductase - - - 0.0000000000000000000000000000000000000000001905 162.0
MMD1_k127_207374_5 TPR repeat - - - 0.00000000000000000000000009633 115.0
MMD1_k127_207374_6 YtxH-like protein - - - 0.0000000000001162 72.0
MMD1_k127_210228_0 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 1.743e-279 883.0
MMD1_k127_210228_1 Bacterial protein of unknown function (DUF853) K06915 - - 1.142e-216 681.0
MMD1_k127_210228_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 464.0
MMD1_k127_210228_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 466.0
MMD1_k127_210228_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001922 279.0
MMD1_k127_210228_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000004467 217.0
MMD1_k127_210228_6 cyclic diguanylate phosphodiesterase - - - 0.00000000000000000000000000000003071 131.0
MMD1_k127_210228_7 - - - - 0.00000000000000000000000000427 113.0
MMD1_k127_2131750_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 570.0
MMD1_k127_2158536_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.167e-202 642.0
MMD1_k127_2158536_1 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 351.0
MMD1_k127_2158536_2 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 265.0
MMD1_k127_2158536_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000008873 258.0
MMD1_k127_2158536_4 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000001173 186.0
MMD1_k127_21640_0 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 1.659e-266 833.0
MMD1_k127_21640_1 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 7.421e-207 650.0
MMD1_k127_21640_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 383.0
MMD1_k127_21640_3 PFAM lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000003321 262.0
MMD1_k127_21640_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000001488 186.0
MMD1_k127_21640_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000004323 162.0
MMD1_k127_21640_6 radical SAM K06871 - - 0.0000000000000000000000000000000000000256 157.0
MMD1_k127_21640_7 Cytochrome c K08738 - - 0.00000000000000000001676 97.0
MMD1_k127_21640_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00003793 54.0
MMD1_k127_2179010_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.49e-288 917.0
MMD1_k127_2179010_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 559.0
MMD1_k127_2179010_10 Enoyl-(Acyl carrier protein) reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000001318 235.0
MMD1_k127_2179010_11 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000001224 209.0
MMD1_k127_2179010_12 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000000000000000000000000000000002131 207.0
MMD1_k127_2179010_13 6-carboxyhexanoate--CoA ligase K01906 - 6.2.1.14 0.000000000000000000000000000000000000000000000000000000007223 212.0
MMD1_k127_2179010_14 - - - - 0.00000000000000000000000000000000000001837 157.0
MMD1_k127_2179010_15 PFAM Glycosyl transferase, group 1 K03525 - 2.7.1.33 0.0000000000000000006416 98.0
MMD1_k127_2179010_16 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.000000000000000001702 98.0
MMD1_k127_2179010_17 cytochrome C peroxidase - - - 0.000000000000004324 80.0
MMD1_k127_2179010_18 PFAM NADPH-dependent FMN reductase - - - 0.00004487 45.0
MMD1_k127_2179010_19 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0001134 46.0
MMD1_k127_2179010_2 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 494.0
MMD1_k127_2179010_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 493.0
MMD1_k127_2179010_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 457.0
MMD1_k127_2179010_5 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 439.0
MMD1_k127_2179010_6 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 422.0
MMD1_k127_2179010_7 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 319.0
MMD1_k127_2179010_8 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 298.0
MMD1_k127_2179010_9 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005311 248.0
MMD1_k127_2193036_0 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000001534 226.0
MMD1_k127_2193036_1 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000003709 133.0
MMD1_k127_2193036_2 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000001153 131.0
MMD1_k127_2193036_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000006871 99.0
MMD1_k127_2193568_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 512.0
MMD1_k127_2193568_1 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 376.0
MMD1_k127_2193568_2 - - - - 0.000000000000000000000000000000000000000003865 159.0
MMD1_k127_2193568_3 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000000000763 130.0
MMD1_k127_22016_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1204.0
MMD1_k127_22016_1 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 298.0
MMD1_k127_22016_2 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000001848 183.0
MMD1_k127_22016_3 Polymer-forming cytoskeletal - - - 0.000000000000000003496 89.0
MMD1_k127_2225933_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 416.0
MMD1_k127_2225933_1 endonuclease III K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001525 291.0
MMD1_k127_2225933_2 ATPase (AAA superfamily) K06923 - - 0.0000000000000000000000000000000000000000000000003644 182.0
MMD1_k127_2225933_3 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000001733 108.0
MMD1_k127_2229884_0 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 360.0
MMD1_k127_2229884_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 305.0
MMD1_k127_2229884_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 299.0
MMD1_k127_2229884_3 HEAT repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002789 292.0
MMD1_k127_2229884_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000005583 259.0
MMD1_k127_2229884_5 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000000000000001335 165.0
MMD1_k127_2229884_6 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.0000000000000000000000000000000000007471 156.0
MMD1_k127_2229884_7 PFAM CheW-like domain K03408 - - 0.00000000000000000000000000000006436 130.0
MMD1_k127_2236278_0 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 569.0
MMD1_k127_2236278_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 428.0
MMD1_k127_2236278_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000006282 222.0
MMD1_k127_2236278_3 nucleotide metabolic process - - - 0.000000000000000000000000000000000005575 145.0
MMD1_k127_2236278_4 amine dehydrogenase activity - - - 0.0000001167 64.0
MMD1_k127_2244920_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 324.0
MMD1_k127_2244920_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0000000000000006228 79.0
MMD1_k127_2253656_0 Polysulphide reductase, NrfD - - - 1.44e-196 620.0
MMD1_k127_2253656_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 524.0
MMD1_k127_2253656_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 433.0
MMD1_k127_2253656_3 PFAM 4Fe-4S K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 435.0
MMD1_k127_2253656_4 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000254 246.0
MMD1_k127_2253656_5 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000001839 202.0
MMD1_k127_2253656_6 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000003045 59.0
MMD1_k127_2271799_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 535.0
MMD1_k127_2271799_1 S1 domain K00243 - - 0.00000000000000000000000000000000001363 138.0
MMD1_k127_2289919_0 alpha amylase, catalytic K01236 - 3.2.1.141 8.709e-217 681.0
MMD1_k127_2289919_1 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 607.0
MMD1_k127_2289919_2 transferase activity, transferring glycosyl groups - - - 0.0001268 44.0
MMD1_k127_2299400_0 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000006657 185.0
MMD1_k127_2299400_1 - - - - 0.0000000000000000000000000000000000000000000000004986 188.0
MMD1_k127_2308588_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000006322 257.0
MMD1_k127_2308588_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000001558 214.0
MMD1_k127_2308588_2 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000006686 187.0
MMD1_k127_2308588_3 Cell surface protein - - - 0.0000000000000088 88.0
MMD1_k127_2308800_0 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 429.0
MMD1_k127_2308800_1 NAD(P)H dehydrogenase (quinone) activity K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 334.0
MMD1_k127_2308800_2 Belongs to the GPI family K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000001044 196.0
MMD1_k127_2308800_3 - - - - 0.000000000000000000000000000000000000000000000000006295 184.0
MMD1_k127_2308800_4 cyclic nucleotide binding K10914 - - 0.0000000000000000000000000000001213 128.0
MMD1_k127_2308800_5 Transglycosylase associated protein - - - 0.0000006066 51.0
MMD1_k127_2308800_6 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0001609 47.0
MMD1_k127_2323715_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 359.0
MMD1_k127_2323715_1 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000001073 224.0
MMD1_k127_2323715_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000001295 164.0
MMD1_k127_2323715_3 Cation efflux family K16264 - - 0.0000000000000000000000007207 108.0
MMD1_k127_2325875_0 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 402.0
MMD1_k127_2325875_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000006161 160.0
MMD1_k127_2325875_2 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000001533 113.0
MMD1_k127_2325875_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000007813 115.0
MMD1_k127_2330882_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 440.0
MMD1_k127_2330882_1 HlyD family K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000158 290.0
MMD1_k127_2330882_2 PFAM ABC-2 type transporter - - - 0.0000000000000000000000000000000000000008321 152.0
MMD1_k127_2333375_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 407.0
MMD1_k127_2333375_1 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 335.0
MMD1_k127_2333375_2 ferrous iron binding K06990,K09141 - - 0.0000000000000000000000000000000000000000000000000000000002615 207.0
MMD1_k127_2353804_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 316.0
MMD1_k127_2353804_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 309.0
MMD1_k127_2353804_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000001468 91.0
MMD1_k127_2353836_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 379.0
MMD1_k127_2353836_1 peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000002022 145.0
MMD1_k127_2353836_2 PFAM response regulator receiver K02483,K07658 - - 0.00000000000000000001069 99.0
MMD1_k127_2353836_3 Belongs to the peptidase C1 family - - - 0.00007694 53.0
MMD1_k127_2357528_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 1.865e-201 641.0
MMD1_k127_2357528_1 Ftsk_gamma K03466 - - 3.05e-198 643.0
MMD1_k127_2357528_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 289.0
MMD1_k127_2357528_3 Belongs to the ATCase OTCase family K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000002249 191.0
MMD1_k127_2357528_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000003511 145.0
MMD1_k127_2357528_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000004329 57.0
MMD1_k127_2370198_0 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 345.0
MMD1_k127_2370198_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000006733 199.0
MMD1_k127_2370198_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000006997 145.0
MMD1_k127_2370198_3 Sigma-54 dependent response regulator K07714 - - 0.0000000000000000000000000000001493 130.0
MMD1_k127_2370198_4 phosphorelay signal transduction system K02437 - - 0.000000000000000000000000006671 113.0
MMD1_k127_2370198_5 phosphorelay signal transduction system K02437 - - 0.00000000000000000000000003631 119.0
MMD1_k127_2370198_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000001756 72.0
MMD1_k127_2370198_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000317 65.0
MMD1_k127_2388448_0 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 338.0
MMD1_k127_2388448_1 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 327.0
MMD1_k127_2388448_3 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000004242 194.0
MMD1_k127_2388448_4 peptidyl-tyrosine sulfation - - - 0.0000004715 59.0
MMD1_k127_2391760_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 287.0
MMD1_k127_2391760_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000996 275.0
MMD1_k127_2391760_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003597 259.0
MMD1_k127_2391760_3 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000004672 206.0
MMD1_k127_2391760_4 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000002433 179.0
MMD1_k127_2391760_5 PHP domain protein K02347 - - 0.000005122 53.0
MMD1_k127_2392483_0 Polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000002605 170.0
MMD1_k127_2392483_1 G-rich domain on putative tyrosine kinase K16554 - - 0.000000000000008695 87.0
MMD1_k127_2402843_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 473.0
MMD1_k127_2402843_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 408.0
MMD1_k127_2402843_2 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000004128 229.0
MMD1_k127_2402843_3 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000000000000000000000000000000001689 145.0
MMD1_k127_2414909_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000327 286.0
MMD1_k127_2414909_1 cobalamin synthesis protein, P47K - - - 0.000000000000000000000000000000000000001872 153.0
MMD1_k127_2414909_2 OsmC-like protein - - - 0.000000000000000001261 92.0
MMD1_k127_241607_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000008771 242.0
MMD1_k127_241607_1 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000001176 198.0
MMD1_k127_241607_2 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000002833 150.0
MMD1_k127_241607_3 energy transducer activity K03646,K03832 - - 0.00000000000000001968 91.0
MMD1_k127_2419654_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 383.0
MMD1_k127_2419654_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002199 273.0
MMD1_k127_2419654_2 Protein of unknown function DUF72 - - - 0.000000000000000000000002748 103.0
MMD1_k127_2419654_3 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.0000000000001901 72.0
MMD1_k127_2422593_0 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 508.0
MMD1_k127_2422593_1 Peptidase family M23 K21471 - - 0.000000000000000000000000000000000000000001318 161.0
MMD1_k127_2422593_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000006543 57.0
MMD1_k127_2423196_0 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 323.0
MMD1_k127_2423196_1 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007503 240.0
MMD1_k127_2423196_2 Protein of unknown function (DUF3124) - - - 0.0000000000000000000000000000000001312 135.0
MMD1_k127_2466831_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 3.776e-270 853.0
MMD1_k127_2466831_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 4.873e-256 799.0
MMD1_k127_2466831_10 Thioesterase K18700 - 3.1.2.29 0.0007477 48.0
MMD1_k127_2466831_2 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 503.0
MMD1_k127_2466831_3 PFAM 4Fe-4S K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008148 449.0
MMD1_k127_2466831_4 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 374.0
MMD1_k127_2466831_5 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 342.0
MMD1_k127_2466831_6 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000001794 226.0
MMD1_k127_2466831_7 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000009246 185.0
MMD1_k127_2466831_8 THIoesterase K18700 - 3.1.2.29 0.00000000000000000004218 91.0
MMD1_k127_2466831_9 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.00000005188 61.0
MMD1_k127_2508514_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.892e-269 847.0
MMD1_k127_2508514_1 Cytochrome c554 and c-prime - - - 4.75e-241 752.0
MMD1_k127_2508514_2 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008113 359.0
MMD1_k127_2508514_3 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000003005 184.0
MMD1_k127_2508514_4 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000000000000001735 161.0
MMD1_k127_2526659_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 4.162e-227 713.0
MMD1_k127_2526659_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 575.0
MMD1_k127_2526659_10 ATPase (AAA superfamily K07133 - - 0.000000000003404 76.0
MMD1_k127_2526659_2 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 546.0
MMD1_k127_2526659_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 538.0
MMD1_k127_2526659_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000001666 244.0
MMD1_k127_2526659_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000002974 213.0
MMD1_k127_2526659_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000001839 202.0
MMD1_k127_2526659_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000009174 191.0
MMD1_k127_2526659_8 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.000000000000000000000000008727 114.0
MMD1_k127_2526659_9 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000005858 83.0
MMD1_k127_25317_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 529.0
MMD1_k127_25317_1 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 484.0
MMD1_k127_25317_10 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000007829 205.0
MMD1_k127_25317_11 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000002774 184.0
MMD1_k127_25317_12 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000006316 186.0
MMD1_k127_25317_13 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000005932 169.0
MMD1_k127_25317_14 cytochrome c biogenesis protein - - - 0.00000000000000000000000000000000000000000524 163.0
MMD1_k127_25317_15 Glutathione peroxidase - - - 0.000000000000000000000000000000000000004811 151.0
MMD1_k127_25317_16 nucleotide phosphatase activity, acting on free nucleotides K00943,K02013,K02017,K03574,K03752,K06928 - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 0.00000000000000000000000000000000000004474 148.0
MMD1_k127_25317_17 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.0000000000000000000000000000000006399 131.0
MMD1_k127_25317_18 - - - - 0.00000000000000000000000000003636 122.0
MMD1_k127_25317_19 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000001934 95.0
MMD1_k127_25317_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 456.0
MMD1_k127_25317_20 Ribosomal protein L36 K02919 - - 0.00000000000001853 73.0
MMD1_k127_25317_21 Rhodanese domain protein - - - 0.00000003955 58.0
MMD1_k127_25317_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 360.0
MMD1_k127_25317_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 356.0
MMD1_k127_25317_5 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 355.0
MMD1_k127_25317_6 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 327.0
MMD1_k127_25317_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 285.0
MMD1_k127_25317_8 Metal-dependent phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001232 261.0
MMD1_k127_25317_9 cytochrome complex assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008959 246.0
MMD1_k127_2540086_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 584.0
MMD1_k127_2540086_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000272 155.0
MMD1_k127_2540086_2 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000001634 104.0
MMD1_k127_2541016_0 phosphoglucosamine mutase activity K01835,K01840 - 5.4.2.2,5.4.2.8 1.543e-219 693.0
MMD1_k127_2541016_1 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 462.0
MMD1_k127_2541016_2 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000004242 255.0
MMD1_k127_2541016_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000001646 223.0
MMD1_k127_2541016_4 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000001464 113.0
MMD1_k127_2550882_0 5-formyltetrahydrofolate cyclo-ligase activity K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 598.0
MMD1_k127_2550882_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 336.0
MMD1_k127_2550882_2 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 320.0
MMD1_k127_2550882_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000018 258.0
MMD1_k127_2550882_4 - - - - 0.00000002735 61.0
MMD1_k127_2569904_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 359.0
MMD1_k127_2569904_1 Domain of unknown function (DUF4347) - - - 0.0000000000000000000000000000000000000000000000000009024 195.0
MMD1_k127_2569904_2 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000003976 107.0
MMD1_k127_2569904_4 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000002151 71.0
MMD1_k127_2569904_5 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000008049 69.0
MMD1_k127_2583295_0 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 304.0
MMD1_k127_2583295_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000008086 215.0
MMD1_k127_2583295_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000007468 194.0
MMD1_k127_2583295_3 PFAM response regulator receiver - - - 0.0000000000000000000000000001784 119.0
MMD1_k127_2611370_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 544.0
MMD1_k127_2613952_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 542.0
MMD1_k127_2613952_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 484.0
MMD1_k127_2613952_2 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000002259 211.0
MMD1_k127_2613952_3 PFAM EAL domain - - - 0.00000000000000000000000132 121.0
MMD1_k127_2639279_0 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 370.0
MMD1_k127_2639279_1 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 327.0
MMD1_k127_2639279_2 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001782 283.0
MMD1_k127_2639279_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000145 267.0
MMD1_k127_264044_0 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 3.444e-276 866.0
MMD1_k127_264044_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 8.782e-244 759.0
MMD1_k127_264044_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 559.0
MMD1_k127_264044_3 Phosphofructokinase K00850 - 2.7.1.11 0.000000000000000004064 83.0
MMD1_k127_2657872_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1128.0
MMD1_k127_2657872_1 Histidine kinase K07642,K18143 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 383.0
MMD1_k127_2657872_2 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 328.0
MMD1_k127_2657872_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 299.0
MMD1_k127_2657872_4 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000005187 175.0
MMD1_k127_2657872_5 Universal stress protein family - - - 0.0000001829 62.0
MMD1_k127_2665076_0 Sigma-54 interaction domain - - - 4.377e-207 653.0
MMD1_k127_2665076_1 membrane transporter protein K07090 - - 1.403e-203 641.0
MMD1_k127_2665076_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 336.0
MMD1_k127_2665076_3 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000003692 150.0
MMD1_k127_2665076_4 - - - - 0.000000000000001737 77.0
MMD1_k127_269503_0 radical SAM domain protein - - - 0.00000000000000000000000000000002998 137.0
MMD1_k127_2701302_0 cell redox homeostasis - - - 1.981e-214 675.0
MMD1_k127_2701302_1 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000006931 266.0
MMD1_k127_2701302_2 PFAM ribonuclease II K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000009498 192.0
MMD1_k127_272653_0 ABC transporter K06158 - - 6.563e-239 752.0
MMD1_k127_272653_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000496 178.0
MMD1_k127_272653_2 conserved protein UCP033924 - - - 0.0000000000000000000000000000001481 125.0
MMD1_k127_272653_3 Rhodanese Homology Domain - - - 0.000000000000000000001417 95.0
MMD1_k127_2731541_0 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000004178 216.0
MMD1_k127_2731541_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000001829 132.0
MMD1_k127_2752664_0 Low temperature requirement A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 388.0
MMD1_k127_2752664_1 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000464 112.0
MMD1_k127_2752664_2 - - - - 0.000000000000054 76.0
MMD1_k127_275628_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 3.859e-200 639.0
MMD1_k127_275628_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 510.0
MMD1_k127_275628_2 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 463.0
MMD1_k127_275628_3 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 448.0
MMD1_k127_275628_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 353.0
MMD1_k127_275628_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 333.0
MMD1_k127_275628_6 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000001112 242.0
MMD1_k127_275628_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000002391 224.0
MMD1_k127_275628_8 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000000000000000000000000000000000000001766 180.0
MMD1_k127_2794113_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1126.0
MMD1_k127_2803577_0 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 624.0
MMD1_k127_2803577_1 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000003344 200.0
MMD1_k127_2803577_2 Helix-turn-helix domain K02806 - - 0.00000000000000000000000000000944 127.0
MMD1_k127_281858_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1034.0
MMD1_k127_281858_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 502.0
MMD1_k127_281858_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000001721 238.0
MMD1_k127_281858_3 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000001652 167.0
MMD1_k127_281858_4 - - - - 0.000000009759 62.0
MMD1_k127_2913677_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 7.151e-197 624.0
MMD1_k127_2913677_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 535.0
MMD1_k127_2913677_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 460.0
MMD1_k127_2913677_3 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 434.0
MMD1_k127_2913677_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 345.0
MMD1_k127_2913677_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000001289 175.0
MMD1_k127_2913677_6 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.0000000000000000000000000000788 116.0
MMD1_k127_2913677_7 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000234 50.0
MMD1_k127_2918222_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001094 291.0
MMD1_k127_2918222_1 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000005696 251.0
MMD1_k127_2920709_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 6.198e-255 802.0
MMD1_k127_2920709_1 PFAM PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000007721 244.0
MMD1_k127_2920709_2 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000006455 220.0
MMD1_k127_2920709_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000007038 189.0
MMD1_k127_2920709_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00001506 49.0
MMD1_k127_2923719_0 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 565.0
MMD1_k127_2923719_1 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006421 433.0
MMD1_k127_2923719_2 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 414.0
MMD1_k127_2923719_3 ABC-type polar amino acid transport system ATPase component K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
MMD1_k127_2923719_4 transcription factor binding - - - 0.00000000000000000000000000000000000000000000000000000000000001346 243.0
MMD1_k127_2923719_5 sulfur carrier activity K07112 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.000000000000000000001002 96.0
MMD1_k127_2927303_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007659 411.0
MMD1_k127_2927303_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 312.0
MMD1_k127_2927303_2 Thiamine biosynthesis protein (ThiI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 307.0
MMD1_k127_2927303_3 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 293.0
MMD1_k127_2927303_4 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000001716 235.0
MMD1_k127_2927303_5 ABC transporter transmembrane region K11085 - - 0.0000102 49.0
MMD1_k127_2929017_0 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002102 273.0
MMD1_k127_2929017_1 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.000000000000000000000000000000000000006686 152.0
MMD1_k127_2929017_2 Carboxymuconolactone decarboxylase family - - - 0.000000002996 64.0
MMD1_k127_2942128_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 443.0
MMD1_k127_2942128_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000008591 210.0
MMD1_k127_2942128_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000001389 205.0
MMD1_k127_2942128_3 Protein of unknown function, DUF480 K09915 - - 0.0000000000000000000000000000000000000000000412 166.0
MMD1_k127_2942128_4 ABC transporter substrate binding protein K01989 - - 0.00000000002419 74.0
MMD1_k127_2943868_0 PFAM magnesium chelatase ChlI subunit K07391 - - 3.898e-209 662.0
MMD1_k127_2943868_1 SMART Elongator protein 3 MiaB NifB - - - 1.105e-197 643.0
MMD1_k127_2943868_10 Tetratricopeptide repeat K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001796 248.0
MMD1_k127_2943868_11 lactate metabolic process K11473,K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006575 252.0
MMD1_k127_2943868_12 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000001387 158.0
MMD1_k127_2943868_14 Regulatory protein, FmdB family - - - 0.00000000000000002355 84.0
MMD1_k127_2943868_2 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 604.0
MMD1_k127_2943868_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 555.0
MMD1_k127_2943868_4 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 484.0
MMD1_k127_2943868_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 393.0
MMD1_k127_2943868_6 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 328.0
MMD1_k127_2943868_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 320.0
MMD1_k127_2943868_8 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001822 284.0
MMD1_k127_2943868_9 PFAM PP-loop domain protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002131 271.0
MMD1_k127_2954424_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 343.0
MMD1_k127_2954424_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000003369 101.0
MMD1_k127_2960764_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 603.0
MMD1_k127_2960764_1 S-adenosylhomocysteine deaminase activity K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 464.0
MMD1_k127_2960764_2 Cellulose synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 428.0
MMD1_k127_2960764_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 400.0
MMD1_k127_2960764_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000005908 239.0
MMD1_k127_2960764_5 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000157 174.0
MMD1_k127_2960764_6 cellulose synthase operon protein YhjU - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000001258 156.0
MMD1_k127_2960764_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000001725 147.0
MMD1_k127_2960764_9 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000009854 66.0
MMD1_k127_2978910_0 SPFH domain / Band 7 family - - - 4.9e-229 727.0
MMD1_k127_2978910_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 442.0
MMD1_k127_2978910_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 353.0
MMD1_k127_298171_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 431.0
MMD1_k127_298171_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 335.0
MMD1_k127_298171_2 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 316.0
MMD1_k127_2986730_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 334.0
MMD1_k127_2986730_1 (Rhomboid) family K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000000004626 239.0
MMD1_k127_2986730_2 PHP-associated K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000004151 233.0
MMD1_k127_2986730_3 zinc-ribbon domain - - - 0.00000000000000000000000000000000000000000000000001253 191.0
MMD1_k127_2986730_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000007178 183.0
MMD1_k127_2986730_5 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000001133 149.0
MMD1_k127_2986730_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000002457 141.0
MMD1_k127_2986730_7 DRTGG domain - - - 0.0000000000000000000000000000002342 126.0
MMD1_k127_2986730_8 PFAM DRTGG domain - - - 0.00000000000000000000000009866 113.0
MMD1_k127_2995490_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 321.0
MMD1_k127_2995490_1 Adenylylsulphate kinase K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000002261 164.0
MMD1_k127_2995490_2 protein kinase activity - - - 0.00000000000001258 79.0
MMD1_k127_3006521_0 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007877 267.0
MMD1_k127_3006521_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000002929 241.0
MMD1_k127_3006521_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000001344 248.0
MMD1_k127_3006521_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000007588 225.0
MMD1_k127_3006521_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000002605 164.0
MMD1_k127_3006521_5 DsrC like protein K11179 - - 0.00000000000000000000000000003506 120.0
MMD1_k127_3006521_6 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000001639 117.0
MMD1_k127_3006521_7 electron transfer activity K05337,K17247 - - 0.00000000000000000000000003997 108.0
MMD1_k127_3010615_0 4Fe-4S dicluster domain - - - 1.053e-304 939.0
MMD1_k127_3010615_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 554.0
MMD1_k127_3010615_10 4Fe-4S binding domain - - - 0.00000000000000001188 83.0
MMD1_k127_3010615_11 lyase activity - - - 0.00000000000000222 81.0
MMD1_k127_3010615_12 lyase activity - - - 0.00000000000204 76.0
MMD1_k127_3010615_13 DsrE/DsrF-like family K07235 - - 0.0000000004131 65.0
MMD1_k127_3010615_14 energy transducer activity K03832 - - 0.0000000006682 67.0
MMD1_k127_3010615_15 sulfur carrier activity - - - 0.000000002785 61.0
MMD1_k127_3010615_16 Belongs to the DsrF TusC family K07236 - - 0.000004655 54.0
MMD1_k127_3010615_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 526.0
MMD1_k127_3010615_3 PFAM Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 422.0
MMD1_k127_3010615_4 TIGRFAM Tat (twin-arginine translocation) pathway signal sequence K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 336.0
MMD1_k127_3010615_5 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 325.0
MMD1_k127_3010615_6 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.000000000000000000000000000000000000000000000000001243 186.0
MMD1_k127_3010615_7 - - - - 0.00000000000000000000000000000000000000000000004332 178.0
MMD1_k127_3010615_8 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000000000000000003376 172.0
MMD1_k127_3010615_9 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000005736 105.0
MMD1_k127_3013421_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000002628 230.0
MMD1_k127_3013421_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000004927 60.0
MMD1_k127_3013421_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0001815 45.0
MMD1_k127_3029494_0 Heat shock 70 kDa protein K04043 - - 2.093e-319 987.0
MMD1_k127_3029494_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 443.0
MMD1_k127_3029494_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000008139 152.0
MMD1_k127_3029494_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000008726 57.0
MMD1_k127_3054464_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 284.0
MMD1_k127_3054464_1 Possible lysine decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000706 270.0
MMD1_k127_3054464_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000006431 271.0
MMD1_k127_3054464_3 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000001243 186.0
MMD1_k127_3054464_4 sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000002612 183.0
MMD1_k127_3054464_5 Histidine kinase-like ATPases - - - 0.0000000000000000000001481 115.0
MMD1_k127_3070480_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 460.0
MMD1_k127_3070480_1 Protein of unknown function (DUF2867) - - - 0.0000000000000000000000000000000000000000000000000000001574 198.0
MMD1_k127_3079189_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.454e-205 646.0
MMD1_k127_3079189_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002493 281.0
MMD1_k127_3079189_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000009688 260.0
MMD1_k127_3079189_3 Formylmethanofuran dehydrogenase, subunit e K11261 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000001629 232.0
MMD1_k127_3079189_4 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000002215 214.0
MMD1_k127_3079189_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000321 219.0
MMD1_k127_3082686_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1107.0
MMD1_k127_3103257_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.095e-196 621.0
MMD1_k127_3103257_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000001962 253.0
MMD1_k127_3103257_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000001604 54.0
MMD1_k127_3109625_0 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 293.0
MMD1_k127_3109625_1 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000302 241.0
MMD1_k127_3109625_2 TrkA-N domain K03455,K10716 - - 0.0000000000000000000000000000000000002569 143.0
MMD1_k127_311259_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 313.0
MMD1_k127_311259_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000004734 234.0
MMD1_k127_311259_2 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000002831 230.0
MMD1_k127_311259_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000001852 153.0
MMD1_k127_311259_4 - - - - 0.000000000000000000000000008162 114.0
MMD1_k127_3116525_0 PFAM Cys Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 333.0
MMD1_k127_3116525_1 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000001784 216.0
MMD1_k127_3116525_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000001522 198.0
MMD1_k127_3118531_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 369.0
MMD1_k127_3118531_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 299.0
MMD1_k127_3118531_2 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000681 172.0
MMD1_k127_3118531_3 Glycosyl transferase, family 2 - - - 0.00000000000000000000002564 111.0
MMD1_k127_3118531_4 Preprotein translocase SecG subunit K03075 - - 0.0000000000008664 69.0
MMD1_k127_3143318_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001357 253.0
MMD1_k127_3143318_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000001418 237.0
MMD1_k127_3143318_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000001082 199.0
MMD1_k127_3143318_3 Cytochrome P460 - - - 0.00000000000000000000000000000000000000002349 159.0
MMD1_k127_3143318_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000003714 148.0
MMD1_k127_3143318_5 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000000002561 116.0
MMD1_k127_3143318_6 - - - - 0.0000000000000000000005387 97.0
MMD1_k127_3143318_7 transferase activity, transferring glycosyl groups - - - 0.000000063 60.0
MMD1_k127_3143318_8 Protein of unknown function (DUF1059) - - - 0.0000004037 55.0
MMD1_k127_3200636_0 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 317.0
MMD1_k127_3200636_1 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000006915 235.0
MMD1_k127_3200636_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000004354 153.0
MMD1_k127_3200636_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03832 - - 0.0000000000000000000000000000000000002163 152.0
MMD1_k127_3200636_4 Universal stress protein family - - - 0.0000000000000000000000000000000000003627 146.0
MMD1_k127_3200636_5 proteolysis K03665 - - 0.00000000000000000000000000000004947 130.0
MMD1_k127_3200636_6 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000001001 66.0
MMD1_k127_3278351_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 337.0
MMD1_k127_3278351_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002284 252.0
MMD1_k127_3278351_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000001563 155.0
MMD1_k127_3278351_3 - - - - 0.000000001413 66.0
MMD1_k127_3278351_4 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000003844 55.0
MMD1_k127_3292633_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 353.0
MMD1_k127_3292633_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001853 266.0
MMD1_k127_3292633_4 VanZ like family - - - 0.000000109 57.0
MMD1_k127_3295133_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 613.0
MMD1_k127_3295133_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000002654 225.0
MMD1_k127_3295133_2 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000003197 97.0
MMD1_k127_3315175_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 578.0
MMD1_k127_3315175_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000001273 216.0
MMD1_k127_3339074_0 Sigma-54 interaction domain - - - 5.015e-213 676.0
MMD1_k127_3339074_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000002384 199.0
MMD1_k127_3406367_0 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 3.803e-240 758.0
MMD1_k127_3406367_1 PFAM ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 315.0
MMD1_k127_3406367_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001334 270.0
MMD1_k127_3524289_0 Actin K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 516.0
MMD1_k127_3524289_1 WYL domain K13573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002067 267.0
MMD1_k127_3524289_2 DegT/DnrJ/EryC1/StrS aminotransferase family K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000003441 100.0
MMD1_k127_3558075_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 3.428e-201 632.0
MMD1_k127_3558075_1 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 546.0
MMD1_k127_3558075_10 Helix-turn-helix domain - - - 0.00000000000003082 83.0
MMD1_k127_3558075_11 DnaJ molecular chaperone homology domain - - - 0.0001651 54.0
MMD1_k127_3558075_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 391.0
MMD1_k127_3558075_3 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 366.0
MMD1_k127_3558075_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 322.0
MMD1_k127_3558075_5 Histidine kinase HAMP - - - 0.0000000000000000000000000000000000000000000000000000000000000001184 245.0
MMD1_k127_3558075_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000003862 222.0
MMD1_k127_3558075_7 3-beta hydroxysteroid dehydrogenase isomerase - - - 0.0000000000000000000000000000000000000000001209 172.0
MMD1_k127_3558075_8 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000005643 148.0
MMD1_k127_3558075_9 phosphorelay signal transduction system - - - 0.000000000000001184 81.0
MMD1_k127_3597996_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 485.0
MMD1_k127_3597996_1 AIR synthase related protein, C-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 361.0
MMD1_k127_3597996_10 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000001212 101.0
MMD1_k127_3597996_11 - - - - 0.000000000000004571 80.0
MMD1_k127_3597996_12 peptidylprolyl isomerase K03769,K07533 - 5.2.1.8 0.000000003682 67.0
MMD1_k127_3597996_13 Tetratricopeptide repeat - - - 0.000005017 57.0
MMD1_k127_3597996_14 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.000108 48.0
MMD1_k127_3597996_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 315.0
MMD1_k127_3597996_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 308.0
MMD1_k127_3597996_4 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000004519 241.0
MMD1_k127_3597996_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000003476 197.0
MMD1_k127_3597996_6 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000000001589 159.0
MMD1_k127_3597996_7 PFAM CBS domain - - - 0.000000000000000000000000000000000000009271 149.0
MMD1_k127_3597996_8 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.00000000000000000000000002207 120.0
MMD1_k127_3597996_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000001032 107.0
MMD1_k127_3621682_0 ATPase BadF BadG BcrA BcrD type - - - 0.0 1178.0
MMD1_k127_3643958_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002406 279.0
MMD1_k127_3643958_1 Domain of unknown function (DUF4388) - - - 0.000000000000000000000001071 115.0
MMD1_k127_3645867_0 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000006272 251.0
MMD1_k127_3645867_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000009293 141.0
MMD1_k127_3649739_0 ABC 3 transport family K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 293.0
MMD1_k127_3649739_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004318 266.0
MMD1_k127_3649739_2 PFAM ABC transporter related K09817 - - 0.00000000000000000001046 92.0
MMD1_k127_3669499_0 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 9.916e-261 824.0
MMD1_k127_3669499_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000001565 177.0
MMD1_k127_3669499_2 Bacterial regulatory proteins, crp family - - - 0.00000000000000000000000000000000002291 139.0
MMD1_k127_3675898_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 455.0
MMD1_k127_3675898_1 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000001177 233.0
MMD1_k127_3675898_2 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000001211 197.0
MMD1_k127_3675898_3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000003764 168.0
MMD1_k127_3681979_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 520.0
MMD1_k127_3681979_1 PFAM YbbR family protein - - - 0.0000000000005757 76.0
MMD1_k127_3686709_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336,K05299,K06441 - 1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000001226 163.0
MMD1_k127_3686709_1 Uncharacterized protein conserved in bacteria (DUF2059) - - - 0.00003416 55.0
MMD1_k127_3687191_0 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 545.0
MMD1_k127_3687191_1 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 482.0
MMD1_k127_3687191_2 SOS response associated peptidase (SRAP) - - - 0.0000000000000000000000000000000000000000000000000000000000000007259 226.0
MMD1_k127_3687191_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000003905 106.0
MMD1_k127_3687191_4 glycosyl transferase family 39 K00721 - 2.4.1.83 0.000009877 58.0
MMD1_k127_3696062_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 549.0
MMD1_k127_3696062_1 PFAM extracellular solute-binding protein, family 5 K02035,K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 287.0
MMD1_k127_3700537_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.265e-233 732.0
MMD1_k127_3700537_1 ACT domain K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 606.0
MMD1_k127_3700537_10 NIL - - - 0.000000000000000000000000002066 112.0
MMD1_k127_3700537_11 PFAM Rubrerythrin - - - 0.0000000000000000006072 93.0
MMD1_k127_3700537_12 radical SAM domain protein - - - 0.0001769 49.0
MMD1_k127_3700537_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 517.0
MMD1_k127_3700537_3 Metalloenzyme superfamily K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 520.0
MMD1_k127_3700537_4 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 350.0
MMD1_k127_3700537_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 333.0
MMD1_k127_3700537_6 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001004 262.0
MMD1_k127_3700537_7 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000001457 236.0
MMD1_k127_3700537_8 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000003631 173.0
MMD1_k127_3700537_9 ThiS family K03636 - - 0.00000000000000000000000000000000002972 136.0
MMD1_k127_3706149_0 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 2.725e-219 697.0
MMD1_k127_3706149_1 - - - - 0.0000000005658 64.0
MMD1_k127_370964_0 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 440.0
MMD1_k127_370964_1 B12 binding domain - - - 0.00000000000000000000000000000001105 128.0
MMD1_k127_370964_2 Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.00000000000005165 74.0
MMD1_k127_3747411_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 368.0
MMD1_k127_3747411_1 Beta-ketoacyl synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 332.0
MMD1_k127_3747411_2 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000006946 126.0
MMD1_k127_3747411_3 COG1233 Phytoene dehydrogenase and related - - - 0.000000000000000000001242 98.0
MMD1_k127_3747411_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006643,GO:0006644,GO:0006664,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009245,GO:0009247,GO:0009259,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016053,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0030312,GO:0031177,GO:0032787,GO:0033218,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046483,GO:0046493,GO:0048037,GO:0051186,GO:0051192,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072341,GO:0072521,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901360,GO:1901564,GO:1901576,GO:1903509 - 0.00000000002726 66.0
MMD1_k127_3751631_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 334.0
MMD1_k127_3751631_1 ABC-2 type transporter K01992,K09694 - - 0.00000000000000000000000000000000000000000005318 170.0
MMD1_k127_3751631_2 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000001028 152.0
MMD1_k127_3751631_3 DUF218 domain - - - 0.0000000000000000000003048 104.0
MMD1_k127_3777128_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.056e-276 862.0
MMD1_k127_3777128_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 2.586e-195 616.0
MMD1_k127_3777128_10 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000005627 91.0
MMD1_k127_3777128_11 mercury ion transmembrane transporter activity K07213 - - 0.0000000000000003247 80.0
MMD1_k127_3777128_12 - - - - 0.000007971 50.0
MMD1_k127_3777128_2 B3/4 domain K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 574.0
MMD1_k127_3777128_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 471.0
MMD1_k127_3777128_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 319.0
MMD1_k127_3777128_5 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000001155 201.0
MMD1_k127_3777128_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000232 203.0
MMD1_k127_3777128_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000003002 190.0
MMD1_k127_3777128_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000004798 141.0
MMD1_k127_3777128_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000001704 125.0
MMD1_k127_3793996_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 308.0
MMD1_k127_3793996_1 PFAM PHP domain - - - 0.0000000000000000000000000000000000001329 149.0
MMD1_k127_3793996_2 Peptidase family M28 - - - 0.000000000000000003233 89.0
MMD1_k127_3793996_3 - - - - 0.0004185 47.0
MMD1_k127_3799900_0 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000004291 169.0
MMD1_k127_3799900_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000003491 108.0
MMD1_k127_3799900_3 phosphorelay signal transduction system - - - 0.00000000000000000001646 100.0
MMD1_k127_3799900_4 PFAM Auxin Efflux Carrier K07088 - - 0.00000000000000006648 85.0
MMD1_k127_381766_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 563.0
MMD1_k127_381766_1 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000003242 249.0
MMD1_k127_3834192_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 314.0
MMD1_k127_3834192_1 Efflux ABC transporter, permease protein K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001873 256.0
MMD1_k127_3834192_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000007751 183.0
MMD1_k127_3834192_3 Small glutamine-rich tetratricopeptide K16365 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007029,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010604,GO:0010605,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0019941,GO:0030162,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032436,GO:0032459,GO:0032460,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0042176,GO:0042177,GO:0042221,GO:0042802,GO:0042803,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043621,GO:0043632,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045048,GO:0045184,GO:0045732,GO:0045861,GO:0045862,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051205,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051641,GO:0051716,GO:0060255,GO:0061024,GO:0061136,GO:0065007,GO:0070727,GO:0071704,GO:0071816,GO:0071840,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901799,GO:1901800,GO:1903050,GO:1903051,GO:1903052,GO:1903069,GO:1903070,GO:1903071,GO:1903332,GO:1903334,GO:1903362,GO:1903363,GO:1903364,GO:1903573,GO:1903644,GO:1903646,GO:1904288,GO:1904292,GO:1904293,GO:1904294,GO:1905897,GO:1905898,GO:2000058,GO:2000059,GO:2000060 - 0.000000009133 64.0
MMD1_k127_3834192_4 Phosphoesterase family - - - 0.00000007311 64.0
MMD1_k127_3844049_0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 398.0
MMD1_k127_3844049_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 323.0
MMD1_k127_384940_0 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004059 252.0
MMD1_k127_384940_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000001446 133.0
MMD1_k127_384940_2 Histidine kinase - - - 0.0000000000000003234 83.0
MMD1_k127_384940_3 PFAM histidine kinase, HAMP region domain protein - - - 0.00000002064 58.0
MMD1_k127_3862615_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 586.0
MMD1_k127_3862615_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 388.0
MMD1_k127_3862615_2 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009062 314.0
MMD1_k127_3862615_3 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000007225 143.0
MMD1_k127_3879311_0 PFAM Cytochrome b5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003579 284.0
MMD1_k127_3879311_1 4Fe-4S binding domain - - - 0.0000000000000000000000000006175 123.0
MMD1_k127_3881401_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006769 494.0
MMD1_k127_3881401_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 481.0
MMD1_k127_3881401_10 - - - - 0.00000000000006646 73.0
MMD1_k127_3881401_11 - - - - 0.00000000002416 67.0
MMD1_k127_3881401_12 Lipoprotein - - - 0.0000006639 59.0
MMD1_k127_3881401_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 349.0
MMD1_k127_3881401_3 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000024 287.0
MMD1_k127_3881401_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000001528 207.0
MMD1_k127_3881401_5 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000000004251 194.0
MMD1_k127_3881401_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000436 171.0
MMD1_k127_3881401_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000005098 102.0
MMD1_k127_3881401_8 His Kinase A (phosphoacceptor) domain K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000001351 86.0
MMD1_k127_3881401_9 Protein of unknown function (DUF2905) - - - 0.000000000000000001936 90.0
MMD1_k127_3893887_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.339e-207 660.0
MMD1_k127_3893887_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004564 271.0
MMD1_k127_3893887_2 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000001059 155.0
MMD1_k127_3914300_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 434.0
MMD1_k127_3914300_1 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000183 225.0
MMD1_k127_3915244_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 410.0
MMD1_k127_3915244_1 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336,K05299 - 1.17.1.10,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 373.0
MMD1_k127_3915244_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K03941 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000005088 125.0
MMD1_k127_3916514_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 533.0
MMD1_k127_3916514_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 503.0
MMD1_k127_3916514_2 PFAM V-type ATPase 116 kDa K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004051 244.0
MMD1_k127_3916514_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000000000000000000000000002589 117.0
MMD1_k127_3916514_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000000000000000001528 107.0
MMD1_k127_3916514_6 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000003309 100.0
MMD1_k127_3916514_7 ATP synthase subunit D K02120 - - 0.0000000000000000001282 90.0
MMD1_k127_3922283_0 Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate K15527 - 2.5.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 348.0
MMD1_k127_3922283_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 322.0
MMD1_k127_3922283_2 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.0000000000000000002306 89.0
MMD1_k127_3922283_3 4Fe-4S dicluster domain K08264 - 1.8.98.1 0.0000000000000000005488 89.0
MMD1_k127_3923124_0 helix_turn_helix, Lux Regulon K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000001953 242.0
MMD1_k127_3923124_1 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000001645 210.0
MMD1_k127_3923124_2 - - - - 0.00000000000000000000000000008287 119.0
MMD1_k127_3930152_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 600.0
MMD1_k127_3930152_1 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 347.0
MMD1_k127_3930152_2 Rhodanese Homology Domain - - - 0.000000000000000000000000001689 116.0
MMD1_k127_3930152_3 Trypsin-like peptidase domain - - - 0.00000000000000000000000004463 123.0
MMD1_k127_3930152_4 xyloglucan:xyloglucosyl transferase activity K20846 - 3.2.1.83 0.0000000000000000000000003804 105.0
MMD1_k127_3935690_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 585.0
MMD1_k127_3935690_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 357.0
MMD1_k127_3935690_2 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000303 284.0
MMD1_k127_3935690_3 superoxide reductase activity K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000000000000000007067 234.0
MMD1_k127_3935690_4 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000312 231.0
MMD1_k127_3935690_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000002012 157.0
MMD1_k127_3935690_6 Protein of unknown function (DUF1353) - - - 0.000000000000000000000001234 109.0
MMD1_k127_3935690_7 Protein of unknown function (DUF1264) - - - 0.0000000000000004419 85.0
MMD1_k127_3935690_8 bacterial-type flagellum-dependent cell motility K01317 - 3.4.21.10 0.000000001777 67.0
MMD1_k127_3939315_0 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 439.0
MMD1_k127_3939315_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 409.0
MMD1_k127_3939315_2 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000121 64.0
MMD1_k127_3939315_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006996,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0016043,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033817,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0061024,GO:0071704,GO:0071840,GO:0072330,GO:1901576 2.3.1.179 0.000002218 51.0
MMD1_k127_3944438_0 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 447.0
MMD1_k127_3944438_1 PFAM inositol monophosphatase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 299.0
MMD1_k127_3944438_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 291.0
MMD1_k127_3944438_3 Adenylylsulphate kinase K00955 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000002215 217.0
MMD1_k127_3944438_4 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000009513 175.0
MMD1_k127_3944438_5 Glycosyl transferase, family 2 K20444 - - 0.00000000000000000000000000000000000000000006726 162.0
MMD1_k127_3948266_0 PFAM HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001071 264.0
MMD1_k127_3948266_1 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001912 235.0
MMD1_k127_3948266_2 Seven times multi-haem cytochrome CxxCH - - - 0.00000000000000000000000000000000000000000000000000000000000000000381 228.0
MMD1_k127_3948266_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000004935 220.0
MMD1_k127_3948266_4 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000006264 188.0
MMD1_k127_3948266_5 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000003237 151.0
MMD1_k127_3948266_6 - - - - 0.00000000000000000000000000000000000004456 146.0
MMD1_k127_3948266_7 Nitric oxide reductase K02305 - - 0.00000000000000000000000006087 113.0
MMD1_k127_39515_0 Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 519.0
MMD1_k127_39515_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000306 222.0
MMD1_k127_39515_2 His Kinase A (phosphoacceptor) domain K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000002016 207.0
MMD1_k127_39515_3 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000002797 79.0
MMD1_k127_3964869_0 PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 466.0
MMD1_k127_3964869_1 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000000001547 180.0
MMD1_k127_3964869_2 Transglycosylase associated protein - - - 0.00000000000000000000000000002995 122.0
MMD1_k127_3977263_0 BadF BadG BcrA BcrD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 398.0
MMD1_k127_3977263_1 PFAM CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 303.0
MMD1_k127_3977263_2 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000009878 250.0
MMD1_k127_3977263_3 PFAM CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000000000000000000000000000000000000000000000000000000000000001926 231.0
MMD1_k127_3977263_4 4Fe-4S single cluster domain - - - 0.000000000000000000000000006703 112.0
MMD1_k127_3977263_6 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000002665 68.0
MMD1_k127_3977263_7 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000006054 61.0
MMD1_k127_3977263_8 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0003982 46.0
MMD1_k127_3985596_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 6.848e-293 914.0
MMD1_k127_3985596_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 387.0
MMD1_k127_3985596_2 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 382.0
MMD1_k127_3985596_3 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 366.0
MMD1_k127_3985596_4 DoxX K15977 - - 0.0000000000000000000000000000000000001366 146.0
MMD1_k127_3985596_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000007544 129.0
MMD1_k127_3985596_6 Tetratricopeptide repeat - - - 0.00000000000000000000000008267 121.0
MMD1_k127_3985596_7 Radical SAM - - - 0.00000000001651 66.0
MMD1_k127_4053461_0 thiosulfate sulfurtransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002592 269.0
MMD1_k127_4053461_1 Sensor histidine kinase, Cache_1, HAMP and PAS domain-containing - - - 0.00000000000000000000000000000000000007957 156.0
MMD1_k127_4053461_2 Histidine kinase - - - 0.00000000000000000000004291 111.0
MMD1_k127_4064677_0 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 330.0
MMD1_k127_4064677_1 mechanosensitive ion channel - - - 0.000000000000000000009463 92.0
MMD1_k127_4064677_2 Methylmuconolactone methyl-isomerase - - - 0.0000000006541 64.0
MMD1_k127_4070327_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.046e-199 627.0
MMD1_k127_4070327_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 473.0
MMD1_k127_4070327_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 456.0
MMD1_k127_4070327_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 415.0
MMD1_k127_4070327_4 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000002278 202.0
MMD1_k127_4070327_5 PFAM Amino acid-binding ACT - - - 0.00000000000000000000000000000000000000000000000000000004676 199.0
MMD1_k127_4094285_0 GTP-binding protein HSR1-related K06944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000036 278.0
MMD1_k127_4094285_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001031 257.0
MMD1_k127_4094285_2 Fic/DOC family K07341 - - 0.0004981 44.0
MMD1_k127_4099312_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 593.0
MMD1_k127_4099312_1 biosynthesis glycosyltransferase - - - 0.00000000000000000000000000000000000000000001015 165.0
MMD1_k127_414405_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 409.0
MMD1_k127_414405_1 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000005587 173.0
MMD1_k127_415985_0 pyridine nucleotide-disulphide oxidoreductase dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 340.0
MMD1_k127_415985_1 - - - - 0.0000000000000000000000000005502 128.0
MMD1_k127_415985_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000002826 99.0
MMD1_k127_4169657_0 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 541.0
MMD1_k127_4169657_1 Cytochrome c oxidase subunit K00404 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 482.0
MMD1_k127_4169657_2 cytochrome c oxidase cbb3-type, subunit II K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 441.0
MMD1_k127_4169657_3 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 287.0
MMD1_k127_4169657_4 Cytochrome c K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000001513 230.0
MMD1_k127_4169657_5 Cupredoxin-like domain - - - 0.0000000000000001816 88.0
MMD1_k127_4169657_6 - - - - 0.0001689 46.0
MMD1_k127_4198844_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 368.0
MMD1_k127_4198844_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000003196 118.0
MMD1_k127_4198844_2 PilZ domain K02676 - - 0.0000000000006749 75.0
MMD1_k127_4198844_3 YtkA-like - - - 0.0000000008293 65.0
MMD1_k127_4245735_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 7.229e-271 844.0
MMD1_k127_4245735_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002335 214.0
MMD1_k127_4245735_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000008714 194.0
MMD1_k127_4245735_3 Membrane - - - 0.0000000000000000000000000000000000003059 144.0
MMD1_k127_4245735_4 Protein of unknown function (DUF3617) - - - 0.00000000000000000000009521 103.0
MMD1_k127_42567_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 9.961e-268 845.0
MMD1_k127_42567_1 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 9.207e-254 804.0
MMD1_k127_42567_10 Transcriptional regulator, MerR family - - - 0.00000000000000000000000000000000007608 138.0
MMD1_k127_42567_11 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000000009924 133.0
MMD1_k127_42567_12 Mo-molybdopterin cofactor metabolic process K03753,K07588 - - 0.00000000000000004717 89.0
MMD1_k127_42567_13 - - - - 0.00000000005533 64.0
MMD1_k127_42567_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.361e-194 616.0
MMD1_k127_42567_3 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 608.0
MMD1_k127_42567_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 440.0
MMD1_k127_42567_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 374.0
MMD1_k127_42567_6 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 321.0
MMD1_k127_42567_7 PFAM cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 310.0
MMD1_k127_42567_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000002956 212.0
MMD1_k127_42567_9 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000001113 143.0
MMD1_k127_4287951_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 446.0
MMD1_k127_4287951_1 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000000000000000000000000000381 209.0
MMD1_k127_4287951_2 SMART PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000002604 180.0
MMD1_k127_4306_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 494.0
MMD1_k127_4306_1 4Fe-4S binding domain - - - 0.000000000000001808 78.0
MMD1_k127_4306_2 Cupin 2, conserved barrel domain protein - - - 0.000000000001609 71.0
MMD1_k127_4364576_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 4.87e-257 803.0
MMD1_k127_4364576_1 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 363.0
MMD1_k127_4364576_2 Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 352.0
MMD1_k127_4364576_3 phosphatase activity K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 296.0
MMD1_k127_4364576_4 imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000001054 255.0
MMD1_k127_4364576_5 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000192 215.0
MMD1_k127_4364576_6 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000005767 78.0
MMD1_k127_4394362_0 Elongation factor G, domain IV K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 351.0
MMD1_k127_4394362_1 PFAM amidohydrolase - - - 0.00000000000000000001148 104.0
MMD1_k127_4394362_2 PFAM Rhodanese domain protein - - - 0.0000000008054 63.0
MMD1_k127_4394362_3 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.0000002485 59.0
MMD1_k127_4394362_4 PFAM Rhodanese domain protein - - - 0.0006651 42.0
MMD1_k127_4395121_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 517.0
MMD1_k127_4395121_1 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 415.0
MMD1_k127_4395121_2 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 417.0
MMD1_k127_4409964_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 518.0
MMD1_k127_4409964_1 Transcriptional regulator K11921,K19338 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 368.0
MMD1_k127_4409964_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000001 139.0
MMD1_k127_4415098_0 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 482.0
MMD1_k127_4415098_1 Polysaccharide deacetylase - - - 0.000002218 51.0
MMD1_k127_4416675_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 482.0
MMD1_k127_4416675_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 457.0
MMD1_k127_4416675_2 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 358.0
MMD1_k127_4416675_3 zinc ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001234 258.0
MMD1_k127_4416675_4 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000005135 164.0
MMD1_k127_4416675_5 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000003299 152.0
MMD1_k127_4416675_6 Competence-damaged protein K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000144 126.0
MMD1_k127_4416675_7 Tetratricopeptide repeat-like domain - - - 0.0000000000000008192 88.0
MMD1_k127_4416675_8 PilZ domain - - - 0.00007303 52.0
MMD1_k127_4419753_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000003262 188.0
MMD1_k127_4422825_0 NADH dehydrogenase - - - 2.917e-216 695.0
MMD1_k127_4422825_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 580.0
MMD1_k127_4422825_2 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336,K05299,K06441 - 1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 531.0
MMD1_k127_4422825_3 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K00528,K16951 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 353.0
MMD1_k127_4422825_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain - - - 0.0000000000000000000000000000000000000000000000000000000000002702 218.0
MMD1_k127_4422825_5 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000001226 210.0
MMD1_k127_4423638_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 5.06e-296 923.0
MMD1_k127_4423638_1 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 325.0
MMD1_k127_4423638_2 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000002746 216.0
MMD1_k127_4423638_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000004368 124.0
MMD1_k127_4423638_4 amine dehydrogenase activity K12287 - - 0.00000000000000004189 87.0
MMD1_k127_4427841_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 382.0
MMD1_k127_4427841_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 351.0
MMD1_k127_4437472_0 dUTP biosynthetic process K01494 GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007569 270.0
MMD1_k127_4437472_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K01665,K03342,K13950 - 2.6.1.85,4.1.3.27,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000798 269.0
MMD1_k127_4437472_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000001424 220.0
MMD1_k127_4444539_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.432e-253 800.0
MMD1_k127_4444539_1 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000008711 126.0
MMD1_k127_4444539_2 chlorophyll binding K03286,K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000001035 128.0
MMD1_k127_4444539_3 spectrin binding K21440 - - 0.000000000000001811 90.0
MMD1_k127_4444539_4 manually curated - - - 0.000000001842 60.0
MMD1_k127_4444539_5 C-terminal, D2-small domain, of ClpB protein K03694 - - 0.0000001319 53.0
MMD1_k127_4444539_6 Integrin alpha FG-GAP repeat containing 2 - GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002313,GO:0002314,GO:0002335,GO:0002366,GO:0002376,GO:0002520,GO:0002521,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005829,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0008150,GO:0009267,GO:0009605,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010646,GO:0010648,GO:0016020,GO:0023051,GO:0023057,GO:0030097,GO:0030098,GO:0030154,GO:0030183,GO:0031090,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034198,GO:0042113,GO:0042149,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045321,GO:0046649,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070013,GO:0071496,GO:0098588,GO:0098805,GO:0098852,GO:0140007,GO:1902531,GO:1902532,GO:1903432,GO:1904262,GO:1990928 - 0.0007167 52.0
MMD1_k127_4444639_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 615.0
MMD1_k127_4444639_1 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 288.0
MMD1_k127_4444639_2 ATP cone domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005426 231.0
MMD1_k127_4444639_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000001131 223.0
MMD1_k127_4448339_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004816 251.0
MMD1_k127_4448339_1 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000002206 164.0
MMD1_k127_4448339_2 Cysteine-rich small domain K07162 - - 0.0000000000000000006021 89.0
MMD1_k127_4448339_3 response regulator, receiver K03413 - - 0.00000000000000001071 88.0
MMD1_k127_4448339_4 Multidrug transporter - - - 0.0000001812 61.0
MMD1_k127_4499890_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 390.0
MMD1_k127_4499890_1 Protein of unknown function (DUF1646) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 308.0
MMD1_k127_4499890_2 Nitrogen regulatory protein P-II K04752 - - 0.0000000000000000000000000000000000000000000000003366 177.0
MMD1_k127_4499890_3 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000003495 87.0
MMD1_k127_4527912_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1305.0
MMD1_k127_4527912_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 488.0
MMD1_k127_4527912_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 383.0
MMD1_k127_4527912_3 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000001235 266.0
MMD1_k127_4527912_4 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000007427 240.0
MMD1_k127_4527912_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.0000000000001883 74.0
MMD1_k127_4540350_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1216.0
MMD1_k127_4540350_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 293.0
MMD1_k127_4540350_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003712 280.0
MMD1_k127_4540350_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000003145 129.0
MMD1_k127_4547674_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000002957 188.0
MMD1_k127_4547674_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000124 136.0
MMD1_k127_4547674_2 photoreceptor activity K07689 - - 0.00000000000000000000001214 112.0
MMD1_k127_4547674_3 cyclic nucleotide binding K10914 - - 0.00000000000000000000005913 104.0
MMD1_k127_4547674_4 cyclic nucleotide binding K10914 - - 0.0000000000000000000002067 100.0
MMD1_k127_4550579_0 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000004614 154.0
MMD1_k127_4550579_1 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000001747 146.0
MMD1_k127_4550579_2 PFAM Auxin Efflux Carrier K07088 - - 0.0000007485 55.0
MMD1_k127_4553321_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 357.0
MMD1_k127_4553321_1 Mur ligase family, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007933 329.0
MMD1_k127_4553321_2 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000234 106.0
MMD1_k127_4553321_3 Sporulation related domain K03749 - - 0.000004239 55.0
MMD1_k127_4554119_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 309.0
MMD1_k127_4554119_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000002547 150.0
MMD1_k127_4555049_0 Peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 325.0
MMD1_k127_4555049_1 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000002275 230.0
MMD1_k127_4555049_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000001323 159.0
MMD1_k127_4555049_3 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000291 61.0
MMD1_k127_4562991_0 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000002869 261.0
MMD1_k127_4562991_1 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000002024 165.0
MMD1_k127_4597477_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 602.0
MMD1_k127_4597477_1 Male sterility protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 310.0
MMD1_k127_4597477_2 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000006391 116.0
MMD1_k127_4600908_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001275 270.0
MMD1_k127_4600908_1 MatE K03327 - - 0.00000000000000000000000000002655 122.0
MMD1_k127_4600908_2 lipopolysaccharide transmembrane transporter activity K03303,K07058 - - 0.0000000000002212 81.0
MMD1_k127_4604412_0 diaminopimelate decarboxylase activity K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 487.0
MMD1_k127_4604412_1 spermidine synthase activity K00797 GO:0003674,GO:0003824,GO:0004766,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 411.0
MMD1_k127_4604412_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 321.0
MMD1_k127_4604412_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 293.0
MMD1_k127_4604412_4 - - - - 0.00000000000000000000000003444 116.0
MMD1_k127_4631802_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 434.0
MMD1_k127_4631802_1 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000004 84.0
MMD1_k127_4632623_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 449.0
MMD1_k127_4632623_1 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006961 264.0
MMD1_k127_4632623_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000001444 211.0
MMD1_k127_4632623_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000002989 206.0
MMD1_k127_4632623_4 thiamine diphosphate biosynthetic process K03154 - - 0.000000000006362 68.0
MMD1_k127_4642397_0 TIGRFAM DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008819 284.0
MMD1_k127_4642397_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
MMD1_k127_4642397_2 Domain of unknown function (DUF4410) - - - 0.000000000000000000004484 100.0
MMD1_k127_4670805_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 3.552e-241 773.0
MMD1_k127_4679743_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009795 573.0
MMD1_k127_4679743_1 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005098 466.0
MMD1_k127_4679743_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 359.0
MMD1_k127_4679743_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000002357 202.0
MMD1_k127_4694510_0 Glycosyl hydrolases family 43 - - - 0.00000000000000000000000000000000000000000002429 173.0
MMD1_k127_4694510_1 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.000002218 51.0
MMD1_k127_4715849_0 DNA polymerase Ligase (LigD) - - - 9.25e-317 987.0
MMD1_k127_4715849_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 397.0
MMD1_k127_4715849_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 335.0
MMD1_k127_4715849_3 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000002712 214.0
MMD1_k127_4715849_4 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000402 162.0
MMD1_k127_4720967_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 328.0
MMD1_k127_4720967_1 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006353 239.0
MMD1_k127_4720967_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000001734 183.0
MMD1_k127_4720967_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000001422 128.0
MMD1_k127_4720967_4 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 0.00000006579 54.0
MMD1_k127_4731915_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 338.0
MMD1_k127_4731915_1 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001136 284.0
MMD1_k127_4731915_2 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000001401 210.0
MMD1_k127_4772867_0 KOW (Kyprides, Ouzounis, Woese) motif. K05785 - - 0.00000000000000000000000000000001983 131.0
MMD1_k127_4772867_1 PFAM PHP domain protein K01104 - 3.1.3.48 0.0000000000000000000000000000003242 129.0
MMD1_k127_4772867_2 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000000000000007198 115.0
MMD1_k127_47751_0 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 449.0
MMD1_k127_47751_1 - - - - 0.0000000000000000000000000000000000000001907 154.0
MMD1_k127_47751_2 transcriptional K03710 - - 0.00000000000000001152 89.0
MMD1_k127_4775149_0 transferase activity, transferring glycosyl groups K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 324.0
MMD1_k127_4775149_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000002436 180.0
MMD1_k127_4775149_2 Glycosyltransferase like family 2 K07011,K20444 - - 0.00000000000000000000000006239 120.0
MMD1_k127_4775149_3 biosynthesis glycosyltransferase - - - 0.0000000000000000000000001207 109.0
MMD1_k127_4775149_4 Glycosyl transferases group 1 - - - 0.0000000000000006066 89.0
MMD1_k127_4775149_5 Psort location CytoplasmicMembrane, score - - - 0.00003454 56.0
MMD1_k127_4775149_6 Glycosyl transferases group 1 - - - 0.0003507 45.0
MMD1_k127_4779939_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 4.106e-291 900.0
MMD1_k127_4779939_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000004633 86.0
MMD1_k127_4779939_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000001141 55.0
MMD1_k127_4783797_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000003862 229.0
MMD1_k127_4783797_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001218 230.0
MMD1_k127_4838835_0 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 376.0
MMD1_k127_4838835_1 alcohol dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 319.0
MMD1_k127_4838835_2 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000009357 233.0
MMD1_k127_4838835_3 - - - - 0.0000000000000008167 81.0
MMD1_k127_4848929_0 Bacterial regulatory protein, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 516.0
MMD1_k127_4848929_1 GHKL domain K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 517.0
MMD1_k127_4848929_2 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006755 258.0
MMD1_k127_4848929_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000002017 106.0
MMD1_k127_4850333_0 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 311.0
MMD1_k127_4850333_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 297.0
MMD1_k127_4850333_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000005717 152.0
MMD1_k127_4851330_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 415.0
MMD1_k127_4851330_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000002552 244.0
MMD1_k127_4875664_0 extracellular solute-binding protein, family 5 K02035,K15584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008466 255.0
MMD1_k127_4875664_1 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000002955 70.0
MMD1_k127_48881_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000002082 205.0
MMD1_k127_48881_1 - - - - 0.00000000000000009813 85.0
MMD1_k127_4935970_0 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 290.0
MMD1_k127_4935970_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004644 274.0
MMD1_k127_4935970_2 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000004734 52.0
MMD1_k127_4936847_0 response regulator, receiver K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000006249 248.0
MMD1_k127_4956612_0 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 436.0
MMD1_k127_4956612_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 342.0
MMD1_k127_4956612_2 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 296.0
MMD1_k127_4956612_3 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 306.0
MMD1_k127_4956612_4 photoreceptor activity K02007,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001264 246.0
MMD1_k127_4956612_5 - - - - 0.00000000000000000000000000000000000000000000000000000000003769 218.0
MMD1_k127_4956612_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000007566 186.0
MMD1_k127_4956612_7 Predicted membrane protein (DUF2318) - - - 0.0000000000007177 75.0
MMD1_k127_4956612_8 Uncharacterized integral membrane protein (DUF2301) - - - 0.00000004057 65.0
MMD1_k127_4959546_0 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000003769 116.0
MMD1_k127_4959546_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000006383 113.0
MMD1_k127_4959546_2 Protein of unknown function (DUF1566) - - - 0.00000000000000003751 89.0
MMD1_k127_4959546_3 FecR protein - - - 0.00003617 53.0
MMD1_k127_4959546_4 Phage integrase, N-terminal SAM-like domain - - - 0.0002844 47.0
MMD1_k127_4962535_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001079 268.0
MMD1_k127_4962535_1 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000002193 193.0
MMD1_k127_4962535_2 Belongs to the UPF0434 family K09791 - - 0.0000000000000000724 81.0
MMD1_k127_4985778_0 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.0 1054.0
MMD1_k127_4985778_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 301.0
MMD1_k127_5022038_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 355.0
MMD1_k127_5022038_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003302 281.0
MMD1_k127_5022038_2 isopentenyl-diphosphate delta-isomerase activity K00949,K01823 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.6.2,5.3.3.2 0.0000000000000000000000000000000000000000000005397 170.0
MMD1_k127_5022038_3 Domain of unknown function (DUF4124) K08309 - - 0.000000000000000000000000000000000000000005415 162.0
MMD1_k127_5022038_4 PFAM response regulator receiver - - - 0.00000000001907 73.0
MMD1_k127_5036008_0 Belongs to the UPF0282 family K07022 - - 0.00000000000000000000000000000000000131 142.0
MMD1_k127_5036008_1 Citrate transporter - - - 0.0000000000000000000000000001484 125.0
MMD1_k127_5036008_2 Uncharacterized ACR, COG1430 K09005 - - 0.0000000001566 71.0
MMD1_k127_506492_0 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 383.0
MMD1_k127_506492_1 Protein of unknown function (DUF3641) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 341.0
MMD1_k127_506492_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 297.0
MMD1_k127_506492_3 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.0000000000000000000000000000000000004828 143.0
MMD1_k127_506492_4 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000824 64.0
MMD1_k127_5075053_0 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 572.0
MMD1_k127_5075053_1 CHASE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 546.0
MMD1_k127_5075053_10 Domain of unknown function (DUF2703) - - - 0.000000000000000000000000000000000005383 141.0
MMD1_k127_5075053_11 peroxiredoxin activity K01607 - 4.1.1.44 0.00000000000000000000000000000002954 128.0
MMD1_k127_5075053_12 Thioredoxin domain - - - 0.000000000000000000001114 96.0
MMD1_k127_5075053_13 Iron-binding zinc finger CDGSH type - - - 0.0001859 46.0
MMD1_k127_5075053_2 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 528.0
MMD1_k127_5075053_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 512.0
MMD1_k127_5075053_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 492.0
MMD1_k127_5075053_5 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 477.0
MMD1_k127_5075053_6 helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 426.0
MMD1_k127_5075053_7 Flavodoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003772 261.0
MMD1_k127_5075053_8 Putative Fe-S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000001305 222.0
MMD1_k127_5075053_9 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000000000009513 149.0
MMD1_k127_5091871_0 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 345.0
MMD1_k127_5091871_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000754 202.0
MMD1_k127_5091871_2 UPF0056 membrane protein K05595 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000007735 194.0
MMD1_k127_5091871_3 TIGRFAM Protein of - - - 0.0000000000000000000001336 100.0
MMD1_k127_5117998_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 640.0
MMD1_k127_5117998_1 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 338.0
MMD1_k127_5117998_2 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 308.0
MMD1_k127_5117998_3 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009889 258.0
MMD1_k127_5117998_4 all-trans-retinol 13,14-reductase activity K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000001237 269.0
MMD1_k127_5117998_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000009667 253.0
MMD1_k127_5117998_6 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K13531 - 2.1.1.63 0.00000000000000000000000000000002975 131.0
MMD1_k127_5117998_7 - - - - 0.00000000000000000000001104 101.0
MMD1_k127_5119660_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 480.0
MMD1_k127_5119660_1 cheY-homologous receiver domain - - - 0.0003054 51.0
MMD1_k127_5122986_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 524.0
MMD1_k127_5122986_1 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000002366 188.0
MMD1_k127_5122986_2 regulator, PATAN and FRGAF domain-containing - - - 0.00000000000000000000000000000000000000000002313 176.0
MMD1_k127_5122986_3 PFAM response regulator receiver K03413 - - 0.000000000000000000000000000000000000006119 148.0
MMD1_k127_5122986_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000006486 147.0
MMD1_k127_5131337_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 477.0
MMD1_k127_5131337_1 DHH family K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 434.0
MMD1_k127_5131337_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000008942 244.0
MMD1_k127_5141955_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 417.0
MMD1_k127_5141955_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002283 213.0
MMD1_k127_5141955_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000001406 196.0
MMD1_k127_5141955_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000002387 102.0
MMD1_k127_5145890_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 409.0
MMD1_k127_5145890_1 Pfam:Arch_ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000004722 218.0
MMD1_k127_5169949_0 Sigma-54 interaction domain K02481,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 436.0
MMD1_k127_5169949_1 Virulence factor BrkB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 303.0
MMD1_k127_5169949_2 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007359 255.0
MMD1_k127_5169949_3 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000174 233.0
MMD1_k127_5169949_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000493 256.0
MMD1_k127_5169949_5 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000001749 188.0
MMD1_k127_5169949_6 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000000000000000000000000000000001292 180.0
MMD1_k127_5169949_7 - - - - 0.000000000000000000000000000000000000000009487 159.0
MMD1_k127_5169949_8 - - - - 0.0005221 45.0
MMD1_k127_5187070_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 6.325e-254 801.0
MMD1_k127_5187070_1 Molecular chaperone. Has ATPase activity K04079 - - 4.917e-253 792.0
MMD1_k127_5187070_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 323.0
MMD1_k127_5187070_3 prenyltransferase activity K03186,K16875 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000001033 214.0
MMD1_k127_5187070_4 Cold shock protein K03704 - - 0.0000000000000000000000003741 108.0
MMD1_k127_5187070_5 - - - - 0.0000000000001414 73.0
MMD1_k127_5191927_0 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 334.0
MMD1_k127_5191927_1 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000007775 169.0
MMD1_k127_519751_0 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000004759 190.0
MMD1_k127_5210903_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 375.0
MMD1_k127_5210903_1 PFAM Archease protein family (DUF101 UPF0211) - - - 0.000000000000000000000000000000000000000211 154.0
MMD1_k127_5210903_2 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000004008 136.0
MMD1_k127_5210903_3 protein histidine kinase activity K01768,K03406,K07636,K07716,K17763 - 2.7.13.3,4.6.1.1 0.00000000000000000000000000000000005529 141.0
MMD1_k127_5219579_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000003427 245.0
MMD1_k127_5219579_1 Belongs to the Fur family K02076,K03711 GO:0000976,GO:0001067,GO:0001130,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000002423 183.0
MMD1_k127_5219579_2 nitrite reductase (NAD(P)H) large subunit K00362 - 1.7.1.15 0.00000000000000000000000000000000001554 139.0
MMD1_k127_5219579_3 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.00000000000000000004927 93.0
MMD1_k127_5221304_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.816e-278 868.0
MMD1_k127_5221304_1 - - - - 0.00000000000000000000000000000000000000000000000006395 183.0
MMD1_k127_5221304_2 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000677 188.0
MMD1_k127_5221304_3 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.00000000000000000005793 103.0
MMD1_k127_5225950_0 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 364.0
MMD1_k127_5225950_1 Part of a membrane complex involved in electron transport K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 357.0
MMD1_k127_5225950_2 Putative Fe-S cluster K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 342.0
MMD1_k127_5225950_3 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000293 234.0
MMD1_k127_5225950_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000001546 210.0
MMD1_k127_5225950_5 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000003001 200.0
MMD1_k127_5225950_6 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000001856 113.0
MMD1_k127_5225950_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000009618 102.0
MMD1_k127_5230552_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 309.0
MMD1_k127_5230552_1 6-carboxyhexanoate--CoA ligase K01906 - 6.2.1.14 0.000000000000000000000000000000000000000000000000000001841 203.0
MMD1_k127_5230552_2 Diacylglycerol kinase catalytic domain - - - 0.000000000000000000000000000000000000000000266 167.0
MMD1_k127_5230552_3 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 0.0002392 48.0
MMD1_k127_5230826_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 4.913e-221 692.0
MMD1_k127_5230826_1 Endoribonuclease that initiates mRNA decay K18682 - - 1.254e-207 657.0
MMD1_k127_5230826_2 AAA ATPase, central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 458.0
MMD1_k127_5230826_3 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 327.0
MMD1_k127_5230826_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000004958 184.0
MMD1_k127_5230826_5 Hydrogenase expression formation protein K03605 GO:0003674,GO:0003824,GO:0004175,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000004304 175.0
MMD1_k127_5230826_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000001183 125.0
MMD1_k127_5230826_7 carbon dioxide binding K04653 - - 0.00000000000000000009855 91.0
MMD1_k127_5230826_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000001475 90.0
MMD1_k127_5232004_0 S1 domain K00243 - - 0.000000000000000000000000000000000000000000000000000000000000000000003721 240.0
MMD1_k127_5244587_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 506.0
MMD1_k127_5244587_1 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000002806 237.0
MMD1_k127_5244889_0 ABC transporter K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 291.0
MMD1_k127_5244889_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000005135 255.0
MMD1_k127_5261536_0 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 346.0
MMD1_k127_5261536_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 300.0
MMD1_k127_5261536_2 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000003791 179.0
MMD1_k127_5268170_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.828e-235 735.0
MMD1_k127_5268170_1 GAF domain K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 518.0
MMD1_k127_5268170_2 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000973 223.0
MMD1_k127_5268170_3 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000004367 191.0
MMD1_k127_5287796_0 PFAM peptidase K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 411.0
MMD1_k127_5287796_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000003346 217.0
MMD1_k127_5287796_2 Stringent starvation protein B K09985 - - 0.00000000000000000000000000000000007425 138.0
MMD1_k127_5287796_3 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000002476 117.0
MMD1_k127_5287796_4 cheY-homologous receiver domain K11522 - - 0.00000000009927 67.0
MMD1_k127_5298814_0 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 536.0
MMD1_k127_5298814_1 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 371.0
MMD1_k127_5298814_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 338.0
MMD1_k127_5298814_3 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.00000000000000000000000000000000000000000000000008039 182.0
MMD1_k127_5298814_4 MlaD protein K02067 - - 0.0000000000000000000004465 97.0
MMD1_k127_5309221_0 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1093.0
MMD1_k127_5309221_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 330.0
MMD1_k127_5309221_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002186 259.0
MMD1_k127_5309221_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000002419 222.0
MMD1_k127_5309221_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000003057 198.0
MMD1_k127_5309221_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000001594 147.0
MMD1_k127_5309221_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000004482 101.0
MMD1_k127_5309221_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000326 74.0
MMD1_k127_5309221_8 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000001993 68.0
MMD1_k127_5311495_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1295.0
MMD1_k127_5311495_1 PFAM major facilitator superfamily MFS_1 K02575 - - 2.235e-242 755.0
MMD1_k127_5311495_2 Nitrate reductase, beta subunit K00371,K17051 - 1.7.5.1 1.31e-234 734.0
MMD1_k127_5311495_3 Nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K11181 GO:0003674,GO:0003824,GO:0005575,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016002,GO:0016020,GO:0016491,GO:0016667,GO:0016673,GO:0019419,GO:0044237,GO:0050311,GO:0055114 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 331.0
MMD1_k127_5311495_4 TIGRFAM respiratory nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 294.0
MMD1_k127_5311495_5 Nitrite and sulphite reductase 4Fe-4S domain K11180,K11181 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001322 286.0
MMD1_k127_5311495_6 TIGRFAM nitrate reductase molybdenum cofactor assembly chaperone K00373 - - 0.000000000000000000000000000000000001755 145.0
MMD1_k127_5311495_7 sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.00000000000000000003594 97.0
MMD1_k127_5311495_8 4fe-4S ferredoxin, iron-sulfur binding domain protein K02572 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0044424,GO:0044464,GO:0050896 - 0.00000001835 55.0
MMD1_k127_5311495_9 denitrification pathway K03532 - - 0.000004945 53.0
MMD1_k127_5312062_0 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 497.0
MMD1_k127_5312062_1 CO dehydrogenase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 297.0
MMD1_k127_5312062_2 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.00000000000000000000000000000000000001199 151.0
MMD1_k127_5312062_3 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000136 59.0
MMD1_k127_5320852_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 422.0
MMD1_k127_5320852_1 nucleoside-triphosphate diphosphatase activity K06287 - - 0.0000000000000000000000000000000000000000000000001973 184.0
MMD1_k127_5320852_2 Uroporphyrinogen decarboxylase K14080 - 2.1.1.246 0.000000000000000831 87.0
MMD1_k127_5330291_0 Poly-beta-hydroxybutyrate polymerase K03821 - - 4.97e-253 792.0
MMD1_k127_5330291_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 380.0
MMD1_k127_5330291_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000001795 192.0
MMD1_k127_5330291_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000003312 67.0
MMD1_k127_5347173_0 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000003884 139.0
MMD1_k127_5347173_1 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000005874 117.0
MMD1_k127_5347173_2 FixH - - - 0.000000000000000000000001984 107.0
MMD1_k127_5347173_3 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000002886 91.0
MMD1_k127_5363859_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 310.0
MMD1_k127_5363859_1 - - - - 0.000000008631 57.0
MMD1_k127_5363859_2 ACT domain protein - - - 0.0001383 51.0
MMD1_k127_5382516_0 glycosyl transferase family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 601.0
MMD1_k127_5382516_1 transmembrane transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004882 258.0
MMD1_k127_5382516_2 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000007569 193.0
MMD1_k127_5382516_3 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000005559 152.0
MMD1_k127_5382516_4 Transposase IS200 like K07491 - - 0.00000000005507 66.0
MMD1_k127_5386730_0 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 373.0
MMD1_k127_5386730_1 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 308.0
MMD1_k127_545255_0 LysM domain K01449,K19223 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000004354 251.0
MMD1_k127_545255_1 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000002938 141.0
MMD1_k127_545255_2 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000006045 94.0
MMD1_k127_5458506_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 502.0
MMD1_k127_5458506_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007323 495.0
MMD1_k127_5458506_2 Belongs to the NiFe NiFeSe hydrogenase large subunit family K14126 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000001442 255.0
MMD1_k127_5458506_3 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000008912 164.0
MMD1_k127_5459598_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 9.318e-237 747.0
MMD1_k127_5459598_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 418.0
MMD1_k127_5461339_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 4.195e-218 682.0
MMD1_k127_5461339_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 289.0
MMD1_k127_5464232_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12141 - - 4.382e-195 619.0
MMD1_k127_5464232_1 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 456.0
MMD1_k127_5464232_2 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009716 246.0
MMD1_k127_5464232_3 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000004294 177.0
MMD1_k127_5473817_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 460.0
MMD1_k127_5473817_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000003743 256.0
MMD1_k127_5473817_2 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000004953 169.0
MMD1_k127_5473817_3 DSBA-like thioredoxin domain - - - 0.0004795 46.0
MMD1_k127_5478181_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 490.0
MMD1_k127_5478181_1 Haloacid dehalogenase domain protein hydrolase - - - 0.0000000000000000000000000000000000000000000000005028 180.0
MMD1_k127_5478181_2 Belongs to the HesB IscA family K15724 - - 0.000000000000000000000003263 104.0
MMD1_k127_5486847_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 594.0
MMD1_k127_5486847_1 Protein of unknown function DUF89 K09116 - - 0.00000000000000000000000000000000000000000000000000000000000000007138 231.0
MMD1_k127_5486847_2 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000002658 225.0
MMD1_k127_5486847_3 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000001084 235.0
MMD1_k127_5486847_4 CHASE K02488,K21009 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000004198 220.0
MMD1_k127_5486847_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000874 196.0
MMD1_k127_5486847_6 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000001098 164.0
MMD1_k127_5486847_7 cyclic diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000003263 143.0
MMD1_k127_5486847_8 HD domain - - - 0.000000000000000000000002824 117.0
MMD1_k127_5486847_9 RNA-binding protein - - - 0.00000000000000000000001998 102.0
MMD1_k127_5492886_0 L-glutamate biosynthetic process - - - 9.912e-194 610.0
MMD1_k127_5492886_1 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 483.0
MMD1_k127_5495432_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 6.472e-200 651.0
MMD1_k127_5509122_0 Glycosyl transferase, family 2 K00721,K07011,K20444 - 2.4.1.83 0.00000000000000000000000000000000000000007305 164.0
MMD1_k127_5509122_1 Methyltransferase FkbM domain - - - 0.0000005244 56.0
MMD1_k127_5551260_0 ABC-type transport system involved in lipoprotein release permease component K02004,K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 381.0
MMD1_k127_5551260_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
MMD1_k127_5551260_2 NosL - - - 0.00000000000000000000000000000000000000000009073 164.0
MMD1_k127_5551260_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000009367 154.0
MMD1_k127_5589652_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 442.0
MMD1_k127_5619169_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.105e-205 646.0
MMD1_k127_5619169_1 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000003315 216.0
MMD1_k127_5619169_2 TIGRFAM molybdenum cofactor synthesis domain - - - 0.000000000000000000000000000000000000000000000000000000001013 205.0
MMD1_k127_5619169_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000005571 188.0
MMD1_k127_5620811_0 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.0000000000000000000000000000911 120.0
MMD1_k127_5620811_1 Cell surface protein - - - 0.0000000000000000000000009509 120.0
MMD1_k127_5620811_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000007469 64.0
MMD1_k127_5628216_0 lipoprotein localization to outer membrane K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 362.0
MMD1_k127_5628216_1 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000001785 139.0
MMD1_k127_5628216_2 - - - - 0.0008163 48.0
MMD1_k127_5633459_0 phosphorelay signal transduction system K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 460.0
MMD1_k127_5633459_1 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 349.0
MMD1_k127_5633459_2 Mo-molybdopterin cofactor metabolic process K02379 - - 0.000000000000000000000000000000000000000000000000000000000000001048 226.0
MMD1_k127_5633459_3 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000195 191.0
MMD1_k127_5647484_0 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 429.0
MMD1_k127_5647484_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 350.0
MMD1_k127_5647484_2 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000007318 132.0
MMD1_k127_5647484_3 - - - - 0.00004878 52.0
MMD1_k127_5647930_0 CAAX prenyl protease N-terminal, five membrane helices - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 462.0
MMD1_k127_5647930_1 Diphthamide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001933 273.0
MMD1_k127_5647930_2 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000000000005754 178.0
MMD1_k127_5653254_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 5.229e-198 622.0
MMD1_k127_5653254_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 508.0
MMD1_k127_5653254_2 PFAM Roadblock LC7 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000002123 215.0
MMD1_k127_5653254_3 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000001166 186.0
MMD1_k127_5654974_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 349.0
MMD1_k127_5654974_1 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.000000000000000000000000000000000000000000000000000000000002223 217.0
MMD1_k127_5660002_0 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 387.0
MMD1_k127_5660002_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006893 279.0
MMD1_k127_5660002_2 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000002474 122.0
MMD1_k127_5676006_0 - - - - 0.0000002632 52.0
MMD1_k127_5696725_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1240.0
MMD1_k127_5696725_1 Biotin-lipoyl like K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002401 270.0
MMD1_k127_5716802_0 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 475.0
MMD1_k127_5716802_1 COGs COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000008068 196.0
MMD1_k127_5722497_0 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000008514 185.0
MMD1_k127_5722497_1 Nitroreductase family - - - 0.00000000000000000000000000000002492 135.0
MMD1_k127_5722497_2 Putative regulatory protein - - - 0.0000000008232 61.0
MMD1_k127_574349_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 469.0
MMD1_k127_574349_1 Pyridoxamine 5'-phosphate oxidase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000006122 229.0
MMD1_k127_574349_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000008161 221.0
MMD1_k127_574349_3 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000001064 215.0
MMD1_k127_574349_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000003922 183.0
MMD1_k127_574349_5 anaerobic respiration - - - 0.0000000000000000000000000000000005807 141.0
MMD1_k127_574349_6 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000001502 134.0
MMD1_k127_574349_7 - - - - 0.00000000004425 67.0
MMD1_k127_5745999_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005235 266.0
MMD1_k127_5745999_1 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000001756 199.0
MMD1_k127_5745999_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000002632 181.0
MMD1_k127_5745999_3 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000009122 158.0
MMD1_k127_5745999_4 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000008457 118.0
MMD1_k127_5745999_5 Cold shock K03704 - - 0.0000000000000000000000001018 107.0
MMD1_k127_5787844_0 Elongation factor G, domain IV K02355 - - 4.026e-194 612.0
MMD1_k127_5787844_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 527.0
MMD1_k127_5787844_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 342.0
MMD1_k127_5787844_3 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000002871 172.0
MMD1_k127_5787844_4 Membrane - - - 0.0000000000000000000000007637 110.0
MMD1_k127_5798872_0 SMART Elongator protein 3 MiaB NifB - - - 7.71e-210 661.0
MMD1_k127_5798872_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000002689 128.0
MMD1_k127_5799006_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 4.833e-227 718.0
MMD1_k127_5799006_1 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000004374 182.0
MMD1_k127_5799006_2 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000001265 138.0
MMD1_k127_5799006_3 SMART Cold shock protein K03704 - - 0.00000000000000000000000001443 112.0
MMD1_k127_5799006_5 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00001719 46.0
MMD1_k127_5799472_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 1.008e-258 816.0
MMD1_k127_5799472_1 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000000000000008954 95.0
MMD1_k127_5799472_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000001157 74.0
MMD1_k127_606960_0 PFAM response regulator receiver K02483,K18344 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002189 251.0
MMD1_k127_606960_1 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002624 238.0
MMD1_k127_606960_2 YacP-like NYN domain K06962 - - 0.00000000000000000001181 95.0
MMD1_k127_606960_3 Histidine kinase K07642,K18143 - 2.7.13.3 0.0000000000001113 78.0
MMD1_k127_6125_0 Protein export membrane protein K07003 - - 0.000000000000000000000000000000000000000000000000000001611 217.0
MMD1_k127_6125_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000006412 168.0
MMD1_k127_6125_2 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000003931 101.0
MMD1_k127_641979_0 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 459.0
MMD1_k127_641979_1 SCO1 SenC K07152 - - 0.000000000000000000000000000000000000000000000000000000000000002113 222.0
MMD1_k127_641979_2 - - - - 0.000000000000000000000000009198 112.0
MMD1_k127_641979_3 Fimbrial assembly protein (PilN) - - - 0.00000002001 59.0
MMD1_k127_641979_4 Type II secretion system (T2SS), protein M subtype b - - - 0.0000000765 62.0
MMD1_k127_687483_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007488 267.0
MMD1_k127_687483_1 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000001414 113.0
MMD1_k127_687483_2 glycosyl transferase group 1 K00754 - - 0.0000000000000000000000002371 109.0
MMD1_k127_687483_3 Uncharacterized conserved protein (DUF2304) K09153 - - 0.00000000000000000000007559 103.0
MMD1_k127_687483_4 TIGRFAM cytochrome C family protein - - - 0.0000000000002517 74.0
MMD1_k127_688573_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 8.581e-263 821.0
MMD1_k127_688573_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000004721 208.0
MMD1_k127_688573_2 amidohydrolase K07045 - - 0.00000000000000000000001056 102.0
MMD1_k127_688573_3 - - - - 0.0000000129 65.0
MMD1_k127_697934_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 508.0
MMD1_k127_697934_1 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000003053 160.0
MMD1_k127_697934_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000007093 69.0
MMD1_k127_699139_0 FAD binding domain K00278 - 1.4.3.16 6.025e-199 634.0
MMD1_k127_699139_1 Bacterial regulatory protein, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 446.0
MMD1_k127_699139_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 410.0
MMD1_k127_699139_3 metal-dependent enzyme K09153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 299.0
MMD1_k127_699139_4 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000305 111.0
MMD1_k127_724292_0 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000001714 228.0
MMD1_k127_724292_1 - - - - 0.000000000000000000000000004723 118.0
MMD1_k127_724292_2 nucleotidyltransferase activity - - - 0.0000000000008578 71.0
MMD1_k127_731130_0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 517.0
MMD1_k127_731130_1 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 313.0
MMD1_k127_731130_2 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 286.0
MMD1_k127_731130_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000236 236.0
MMD1_k127_731130_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000122 168.0
MMD1_k127_731130_5 LETM1-like protein - - - 0.00007211 49.0
MMD1_k127_732804_0 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009065 433.0
MMD1_k127_732804_1 ZIP Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000728 407.0
MMD1_k127_732804_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 380.0
MMD1_k127_732804_3 Belongs to the acetyltransferase family. ArgA subfamily K00619,K14681 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000001935 220.0
MMD1_k127_732804_4 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000125 187.0
MMD1_k127_732804_5 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000001671 168.0
MMD1_k127_732804_6 response regulator receiver - - - 0.00000000000000000000000000000000000000001009 157.0
MMD1_k127_732804_7 FHA domain GGDEF domain protein - - - 0.00003188 47.0
MMD1_k127_735163_0 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 604.0
MMD1_k127_735163_1 Citrate synthase, C-terminal domain K01647,K01659 - 2.3.3.1,2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 404.0
MMD1_k127_735163_3 GIY-YIG catalytic domain K07461 - - 0.00000000000005355 79.0
MMD1_k127_735163_4 - - - - 0.000002807 51.0
MMD1_k127_735163_5 PFAM type IV pilus assembly PilZ - - - 0.00002102 54.0
MMD1_k127_735163_6 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0002482 51.0
MMD1_k127_740671_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.166e-277 868.0
MMD1_k127_740671_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 544.0
MMD1_k127_740671_2 General secretory system II, protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 446.0
MMD1_k127_740671_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001501 270.0
MMD1_k127_740671_4 DNA topoisomerase type I activity K03168 - 5.99.1.2 0.00000000000000000000000000000000000003801 151.0
MMD1_k127_740671_5 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000009596 107.0
MMD1_k127_740671_6 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000001036 78.0
MMD1_k127_741977_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 347.0
MMD1_k127_741977_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000001225 168.0
MMD1_k127_741977_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000003835 57.0
MMD1_k127_743963_0 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 387.0
MMD1_k127_743963_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 317.0
MMD1_k127_743963_2 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 288.0
MMD1_k127_743963_3 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000002348 237.0
MMD1_k127_743963_4 protocatechuate 3,4-dioxygenase - - - 0.00000000000000000000000000000000000000000000001224 175.0
MMD1_k127_743963_5 - - - - 0.000000000000003526 84.0
MMD1_k127_751073_0 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 3.069e-234 733.0
MMD1_k127_751073_1 Nitrogenase component 1 type Oxidoreductase K02587 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 400.0
MMD1_k127_751073_2 Domain of unknown function (DUF3364) K02591 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 377.0
MMD1_k127_751073_3 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 341.0
MMD1_k127_751073_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000001933 211.0
MMD1_k127_751073_5 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000002491 55.0
MMD1_k127_754388_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 372.0
MMD1_k127_754388_1 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000154 176.0
MMD1_k127_754388_2 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000003823 120.0
MMD1_k127_754388_3 Roadblock/LC7 domain - - - 0.00000000000000000000792 96.0
MMD1_k127_754388_4 Tetratricopeptide repeat - - - 0.00000000000000000001916 104.0
MMD1_k127_754388_5 Belongs to the peptidase M24B family K01262,K01271 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9,3.4.13.9 0.00001336 48.0
MMD1_k127_776483_0 Oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000916 284.0
MMD1_k127_776483_1 PFAM Protein phosphatase K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000343 162.0
MMD1_k127_777388_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 594.0
MMD1_k127_777388_1 PFAM Class II aldolase K01628 - 4.1.2.17 0.00000000006654 66.0
MMD1_k127_7832_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 447.0
MMD1_k127_7832_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 354.0
MMD1_k127_7832_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 333.0
MMD1_k127_7832_3 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 332.0
MMD1_k127_7832_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005618 285.0
MMD1_k127_7832_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000006996 229.0
MMD1_k127_7832_6 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000000000000000000001181 197.0
MMD1_k127_788600_0 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 457.0
MMD1_k127_788600_1 DRTGG domain K06873 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 321.0
MMD1_k127_788600_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 286.0
MMD1_k127_788600_3 - - - - 0.000000000000000004391 90.0
MMD1_k127_788600_4 PilZ domain - - - 0.0008302 46.0
MMD1_k127_790413_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 373.0
MMD1_k127_790413_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000002161 133.0
MMD1_k127_790413_2 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000002551 72.0
MMD1_k127_794523_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1662.0
MMD1_k127_800592_0 Belongs to the helicase family. UvrD subfamily - - - 1.368e-194 637.0
MMD1_k127_801329_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1194.0
MMD1_k127_804090_0 GTP-binding GTPase Middle Region K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 600.0
MMD1_k127_804090_1 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 584.0
MMD1_k127_804090_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 458.0
MMD1_k127_804090_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 419.0
MMD1_k127_804090_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 334.0
MMD1_k127_804090_5 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000001944 263.0
MMD1_k127_804090_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000005645 266.0
MMD1_k127_804090_7 phosphatase homologous to the C-terminal domain of histone macroH2A1 K07478 - - 0.0000000000000000000000000000000000000000000000000000000006545 207.0
MMD1_k127_804090_8 Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000137 93.0
MMD1_k127_804090_9 Protein of unknown function (DUF465) K09794 - - 0.00000000000000002227 83.0
MMD1_k127_806490_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 294.0
MMD1_k127_806490_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 - 2.1.1.200,3.5.1.19,6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000003689 241.0
MMD1_k127_807368_0 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 430.0
MMD1_k127_807368_1 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 358.0
MMD1_k127_807368_2 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000004732 172.0
MMD1_k127_807368_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000002713 111.0
MMD1_k127_815522_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 468.0
MMD1_k127_815522_1 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000003421 150.0
MMD1_k127_815522_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000001554 120.0
MMD1_k127_818043_0 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000000000000000000000000003172 189.0
MMD1_k127_818043_1 Fic/DOC family K07341 - - 0.00000000000000000000000000000000000003791 148.0
MMD1_k127_818043_2 cheY-homologous receiver domain K03412,K03413 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000002929 129.0
MMD1_k127_818043_3 - - - - 0.000000000000000000000000001254 117.0
MMD1_k127_818043_4 Protein of unknown function (DUF1810) - - - 0.0000000000000000000000001272 107.0
MMD1_k127_818043_5 PFAM SpoVT AbrB K07172,K18842 - - 0.000000000000000000005824 94.0
MMD1_k127_819406_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 465.0
MMD1_k127_819406_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001079 268.0
MMD1_k127_819406_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000006429 190.0
MMD1_k127_820844_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 3.172e-302 935.0
MMD1_k127_820844_1 - - - - 0.000000000000000000000000000000006556 136.0
MMD1_k127_820844_2 PFAM thiamineS protein - - - 0.0000000001099 66.0
MMD1_k127_82305_0 May be involved in recombinational repair of damaged DNA K03631 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 406.0
MMD1_k127_82305_1 membrane K09133 - - 0.000000000000000000000000000000000000000000000000000000000000000001157 236.0
MMD1_k127_82305_2 PFAM Cys Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000219 98.0
MMD1_k127_82305_3 4Fe-4S binding domain K00176 - 1.2.7.3 0.0000000000000000006263 89.0
MMD1_k127_826621_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.069e-235 741.0
MMD1_k127_826621_1 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 460.0
MMD1_k127_826621_2 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 441.0
MMD1_k127_826621_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 334.0
MMD1_k127_826621_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000008706 227.0
MMD1_k127_826621_5 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000001431 74.0
MMD1_k127_854711_0 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 454.0
MMD1_k127_854711_1 Protein of unknown function (DUF1847) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 395.0
MMD1_k127_854711_2 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003842 243.0
MMD1_k127_85929_0 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 289.0
MMD1_k127_85929_1 - - - - 0.000000000000003407 78.0
MMD1_k127_85929_2 Diguanylate cyclase - - - 0.0000000002711 66.0
MMD1_k127_859975_0 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000000000000000002731 242.0
MMD1_k127_859975_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000003987 182.0
MMD1_k127_859975_2 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000004583 186.0
MMD1_k127_859975_3 PFAM TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000003692 153.0
MMD1_k127_8609_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 3.016e-226 719.0
MMD1_k127_8609_1 TIGRFAM iron-sulfur cluster binding protein - - - 0.0000000000000000000000000000000000000000000000002108 183.0
MMD1_k127_8609_2 - - - - 0.00000000000001304 79.0
MMD1_k127_8609_3 Nitrate reductase gamma subunit - - - 0.000002579 57.0
MMD1_k127_870701_0 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 425.0
MMD1_k127_870701_1 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 379.0
MMD1_k127_870701_10 4Fe-4S binding domain - - - 0.000000001619 63.0
MMD1_k127_870701_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000002409 238.0
MMD1_k127_870701_3 TIGRFAM FeS cluster assembly scaffold protein NifU K04488 - - 0.00000000000000000000000000000000000000000000000000000001531 199.0
MMD1_k127_870701_4 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000003051 182.0
MMD1_k127_870701_5 2 iron, 2 sulfur cluster binding K01465,K02823,K05784,K17828 - 1.3.1.14,3.5.2.3 0.0000000000000000000000000000000000000000000006451 172.0
MMD1_k127_870701_6 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.000000000000000000000000000000000000000005591 160.0
MMD1_k127_870701_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000005008 150.0
MMD1_k127_870701_8 Sulfurtransferase TusA - - - 0.0000000000000000000004719 105.0
MMD1_k127_870701_9 Tetratricopeptide repeat - - - 0.000000000005675 74.0
MMD1_k127_871882_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 368.0
MMD1_k127_871882_1 HAF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 343.0
MMD1_k127_871882_2 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 301.0
MMD1_k127_871882_3 DJ-1/PfpI family K03152,K05520,K05687 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000001639 252.0
MMD1_k127_871882_4 Protein of unknown function DUF262 - - - 0.00000000000000000000000000000001231 139.0
MMD1_k127_881840_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1012.0
MMD1_k127_881840_1 nuclease K00590,K01174,K02027 - 2.1.1.113,3.1.31.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 462.0
MMD1_k127_881840_2 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 323.0
MMD1_k127_881840_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000008798 87.0
MMD1_k127_899859_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 576.0
MMD1_k127_899859_1 lipolytic protein G-D-S-L family - - - 0.0000000000000000000003735 100.0
MMD1_k127_906975_0 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 346.0
MMD1_k127_906975_1 PFAM major facilitator superfamily MFS_1 K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000002147 239.0
MMD1_k127_915797_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 546.0
MMD1_k127_915797_1 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 485.0
MMD1_k127_915797_2 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 356.0
MMD1_k127_915797_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 320.0
MMD1_k127_915797_4 Pas domain K13069 - 2.7.7.65 0.00000000000000000000000000000000000000000001359 177.0
MMD1_k127_915797_5 GYD domain - - - 0.00000000000000000000000000000000003598 136.0
MMD1_k127_915797_6 sulfur carrier activity K04085 - - 0.00000000000000000003226 95.0
MMD1_k127_919929_0 protein secretion K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 561.0
MMD1_k127_919929_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 452.0
MMD1_k127_919929_2 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000009509 191.0
MMD1_k127_919929_3 GntR family K03710 - - 0.0000000000000000002031 91.0
MMD1_k127_926872_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.175e-195 623.0
MMD1_k127_926872_1 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 294.0
MMD1_k127_926872_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008084 252.0
MMD1_k127_926872_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000002407 219.0
MMD1_k127_926872_4 bacterial (prokaryotic) histone like domain K05788 - - 0.000000000000000000000001741 105.0
MMD1_k127_933920_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 594.0
MMD1_k127_933920_1 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 421.0
MMD1_k127_933920_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000001516 264.0
MMD1_k127_933920_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000001314 197.0
MMD1_k127_933920_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000008883 158.0
MMD1_k127_933920_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000001854 117.0
MMD1_k127_958766_0 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 328.0
MMD1_k127_958766_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000002178 224.0
MMD1_k127_958766_2 Glycosyl transferase family 2 - - - 0.00000002064 57.0
MMD1_k127_958766_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000006155 51.0