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Overview

ID MAG02379
Name MMD3_bin.10
Sample SMP0060
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class UBA9217
Order UBA9217
Family UBA9217
Genus JAJYKN01
Species
Assembly information
Completeness (%) 70.7
Contamination (%) 0.94
GC content (%) 54.0
N50 (bp) 42,692
Genome size (bp) 2,565,131

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2285

Gene name Description KEGG GOs EC E-value Score Sequence
MMD3_k127_1032034_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 577.0
MMD3_k127_1032034_1 sugar transferase K00996 - 2.7.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 563.0
MMD3_k127_1032034_10 Involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000003095 216.0
MMD3_k127_1032034_11 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000004316 216.0
MMD3_k127_1032034_12 Bacterial transferase hexapeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000345 202.0
MMD3_k127_1032034_13 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000002855 198.0
MMD3_k127_1032034_14 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000003511 205.0
MMD3_k127_1032034_15 Glycosyl transferases group 1 - - - 0.0000000000000000000000008951 117.0
MMD3_k127_1032034_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 471.0
MMD3_k127_1032034_3 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 439.0
MMD3_k127_1032034_4 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 436.0
MMD3_k127_1032034_5 -O-antigen K02847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002365 286.0
MMD3_k127_1032034_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001147 278.0
MMD3_k127_1032034_7 Adenylylsulphate kinase K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002119 270.0
MMD3_k127_1032034_8 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003454 276.0
MMD3_k127_1032034_9 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002796 253.0
MMD3_k127_1036772_0 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000000002073 212.0
MMD3_k127_1036772_1 Polysaccharide export protein K01991,K20987 - - 0.0000000000008603 70.0
MMD3_k127_1052493_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 3.565e-268 837.0
MMD3_k127_1052493_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.342e-264 830.0
MMD3_k127_1052493_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 443.0
MMD3_k127_1052493_11 e3 binding domain K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 436.0
MMD3_k127_1052493_12 Histone deacetylase domain K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 393.0
MMD3_k127_1052493_13 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 377.0
MMD3_k127_1052493_14 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008705 371.0
MMD3_k127_1052493_15 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055 365.0
MMD3_k127_1052493_16 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 362.0
MMD3_k127_1052493_17 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 352.0
MMD3_k127_1052493_18 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 346.0
MMD3_k127_1052493_19 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 334.0
MMD3_k127_1052493_2 Sigma-54 interaction domain - - - 1.605e-212 667.0
MMD3_k127_1052493_20 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 327.0
MMD3_k127_1052493_21 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002213 281.0
MMD3_k127_1052493_22 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000002509 263.0
MMD3_k127_1052493_23 PFAM NADH Ubiquinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000001925 239.0
MMD3_k127_1052493_24 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000004 258.0
MMD3_k127_1052493_25 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000008757 235.0
MMD3_k127_1052493_26 - - - - 0.000000000000000000000000000000000000000000000000000000000808 205.0
MMD3_k127_1052493_27 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000479 185.0
MMD3_k127_1052493_28 Phosphonate ABC transporter, periplasmic K02044 - - 0.0000000000000000000000000000000000000002946 160.0
MMD3_k127_1052493_29 - K07112 - - 0.00000000000000000000000000000000000002224 158.0
MMD3_k127_1052493_3 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 550.0
MMD3_k127_1052493_30 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.00000000000000000000000000000000000003735 149.0
MMD3_k127_1052493_31 - K07112 - - 0.00000000000000000000000000000001788 132.0
MMD3_k127_1052493_32 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000003089 124.0
MMD3_k127_1052493_33 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000794 99.0
MMD3_k127_1052493_34 Domain of Unknown Function (DUF1540) - - - 0.00000000000000000003596 94.0
MMD3_k127_1052493_35 - - - - 0.00000000000000008817 84.0
MMD3_k127_1052493_36 - - - - 0.0000000000000002234 88.0
MMD3_k127_1052493_37 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000003221 81.0
MMD3_k127_1052493_38 Belongs to the UPF0250 family K09158 - - 0.000000000000003598 78.0
MMD3_k127_1052493_39 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000001239 70.0
MMD3_k127_1052493_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 520.0
MMD3_k127_1052493_40 mttA/Hcf106 family - - - 0.000000000003837 69.0
MMD3_k127_1052493_42 - - - - 0.0000004615 59.0
MMD3_k127_1052493_43 small metal-binding protein - - - 0.000001546 54.0
MMD3_k127_1052493_5 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009821 485.0
MMD3_k127_1052493_6 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 485.0
MMD3_k127_1052493_7 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 470.0
MMD3_k127_1052493_8 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 454.0
MMD3_k127_1052493_9 cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 445.0
MMD3_k127_1092399_0 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002338 265.0
MMD3_k127_1092746_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 495.0
MMD3_k127_1092746_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 306.0
MMD3_k127_1116053_0 L-threonylcarbamoyladenylate synthase K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000001317 175.0
MMD3_k127_1116053_1 SMART Nucleotide binding protein PINc K07175 - - 0.000000000211 61.0
MMD3_k127_1310364_0 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 234.0
MMD3_k127_1310364_1 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000001871 199.0
MMD3_k127_1335121_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.357e-302 947.0
MMD3_k127_1335121_1 Evidence 2b Function of strongly homologous gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 566.0
MMD3_k127_1335121_10 Protein of unknown function (DUF1573) - - - 0.0002207 45.0
MMD3_k127_1335121_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 570.0
MMD3_k127_1335121_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 529.0
MMD3_k127_1335121_4 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003898 284.0
MMD3_k127_1335121_5 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008689 248.0
MMD3_k127_1335121_6 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 0.0000000000000000000000000247 117.0
MMD3_k127_1335121_8 Protein of unknown function (DUF1573) - - - 0.00001145 50.0
MMD3_k127_1338705_0 Type III restriction enzyme res subunit - - - 1.945e-277 875.0
MMD3_k127_1338705_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 446.0
MMD3_k127_1338705_2 Abc-type multidrug transport system, permease component K01992 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 374.0
MMD3_k127_1338705_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 366.0
MMD3_k127_1338705_4 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000000000001136 149.0
MMD3_k127_1338705_5 Nucleotidyltransferase domain K07075 - - 0.00000000000000000000000002477 110.0
MMD3_k127_1338705_6 - - - - 0.000000000000000000000000457 112.0
MMD3_k127_1338705_7 - - - - 0.00000000002074 73.0
MMD3_k127_1420653_0 Molecular chaperone. Has ATPase activity K04079 - - 4.069e-279 870.0
MMD3_k127_1420653_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.411e-241 753.0
MMD3_k127_1420653_10 ABC transporter K01996 - - 0.00000000000000000000000000000000003189 134.0
MMD3_k127_1420653_11 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000002065 120.0
MMD3_k127_1420653_12 - - - - 0.000000000003413 70.0
MMD3_k127_1420653_2 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 550.0
MMD3_k127_1420653_3 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 548.0
MMD3_k127_1420653_4 nadp oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 299.0
MMD3_k127_1420653_5 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000005656 269.0
MMD3_k127_1420653_6 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000000000000000004368 216.0
MMD3_k127_1420653_7 OsmC-like protein K04063 - - 0.00000000000000000000000000000000000000000000005164 173.0
MMD3_k127_1420653_8 Cupin domain - - - 0.0000000000000000000000000000000000000004077 152.0
MMD3_k127_1420653_9 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.000000000000000000000000000000000000003659 152.0
MMD3_k127_1438003_0 Sigma-54 interaction domain K07714,K07715 - - 1.14e-197 625.0
MMD3_k127_1438003_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 535.0
MMD3_k127_1438003_10 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000007813 162.0
MMD3_k127_1438003_12 Protein of unknown function (DUF2844) - - - 0.000000000000008431 82.0
MMD3_k127_1438003_13 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000117 75.0
MMD3_k127_1438003_2 Protein of unknown function (DUF3443) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 460.0
MMD3_k127_1438003_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 458.0
MMD3_k127_1438003_4 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 329.0
MMD3_k127_1438003_5 Ceramidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005433 257.0
MMD3_k127_1438003_6 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000001571 235.0
MMD3_k127_1438003_7 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000001733 242.0
MMD3_k127_1438003_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000853 220.0
MMD3_k127_1438003_9 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000009515 175.0
MMD3_k127_1439247_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 389.0
MMD3_k127_1439247_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 327.0
MMD3_k127_1439247_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000004712 221.0
MMD3_k127_1439247_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002984 195.0
MMD3_k127_1439247_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000007431 149.0
MMD3_k127_1439247_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000008731 130.0
MMD3_k127_1439247_6 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000001822 119.0
MMD3_k127_1439247_7 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000002438 74.0
MMD3_k127_1439247_8 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000001161 53.0
MMD3_k127_1439247_9 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000005258 52.0
MMD3_k127_1470648_0 Fe-S iron-sulfur cluster assembly protein, NifU family K04488 - - 0.00000000000000000000000000000000000000000000000000000004041 198.0
MMD3_k127_1470648_1 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000003624 106.0
MMD3_k127_1524400_0 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000002729 158.0
MMD3_k127_1524400_1 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000001593 106.0
MMD3_k127_1554628_0 Predicted permease K07089 - - 7.221e-228 721.0
MMD3_k127_1554628_1 SMART Elongator protein 3 MiaB NifB K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 469.0
MMD3_k127_1554628_10 peptidyl-tyrosine sulfation - - - 0.00000134 57.0
MMD3_k127_1554628_2 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 355.0
MMD3_k127_1554628_3 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 322.0
MMD3_k127_1554628_4 radical SAM domain protein K06137,K06138 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000001484 234.0
MMD3_k127_1554628_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000001273 182.0
MMD3_k127_1554628_7 glycine betaine transport K05845,K05846 - - 0.0000000000000000000000000000000000000001985 162.0
MMD3_k127_1554628_9 NOG31153 non supervised orthologous group - - - 0.00000001397 59.0
MMD3_k127_1603609_0 Tetratricopeptide repeat - - - 0.0002622 49.0
MMD3_k127_16232_0 ABC-type tungstate transport system permease component-like protein K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002476 270.0
MMD3_k127_16232_1 Transcriptional regulator K11921,K19338 - - 0.000000000000000000000000000000000000000000000003285 184.0
MMD3_k127_16232_2 PBP superfamily domain K05772 - - 0.00000000000000001755 83.0
MMD3_k127_16232_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000002688 74.0
MMD3_k127_1627886_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 8.597e-198 630.0
MMD3_k127_1627886_1 TIGRFAM Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 605.0
MMD3_k127_1627886_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007342 339.0
MMD3_k127_1627886_11 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 348.0
MMD3_k127_1627886_12 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 338.0
MMD3_k127_1627886_13 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 334.0
MMD3_k127_1627886_14 PFAM glycosyl transferase, family 9 K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 327.0
MMD3_k127_1627886_15 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 318.0
MMD3_k127_1627886_16 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000009951 246.0
MMD3_k127_1627886_17 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000005358 256.0
MMD3_k127_1627886_18 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000009723 213.0
MMD3_k127_1627886_19 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000009653 156.0
MMD3_k127_1627886_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 551.0
MMD3_k127_1627886_20 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000003053 151.0
MMD3_k127_1627886_21 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000001376 118.0
MMD3_k127_1627886_22 Outer membrane lipoprotein Slp family K07285 - - 0.000000000000000000005338 98.0
MMD3_k127_1627886_23 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000001452 90.0
MMD3_k127_1627886_24 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000336 78.0
MMD3_k127_1627886_25 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000001594 62.0
MMD3_k127_1627886_26 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00002435 51.0
MMD3_k127_1627886_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 505.0
MMD3_k127_1627886_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 498.0
MMD3_k127_1627886_5 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 426.0
MMD3_k127_1627886_6 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 426.0
MMD3_k127_1627886_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 416.0
MMD3_k127_1627886_8 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 362.0
MMD3_k127_1627886_9 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 368.0
MMD3_k127_1660275_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 349.0
MMD3_k127_1673295_0 Transposase K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 376.0
MMD3_k127_1673295_1 to the N-terminal region of K07491 - - 0.0000000000000000000000000000000000000000000000000000000002093 206.0
MMD3_k127_1720176_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 8.388e-246 768.0
MMD3_k127_1720176_1 Type II/IV secretion system protein K02454,K02652 - - 2.687e-220 699.0
MMD3_k127_1720176_10 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 447.0
MMD3_k127_1720176_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 463.0
MMD3_k127_1720176_12 Chalcone and stilbene synthases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 436.0
MMD3_k127_1720176_13 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 434.0
MMD3_k127_1720176_14 binding domain protein K07138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 427.0
MMD3_k127_1720176_15 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 417.0
MMD3_k127_1720176_16 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 419.0
MMD3_k127_1720176_17 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 378.0
MMD3_k127_1720176_18 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 377.0
MMD3_k127_1720176_19 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 357.0
MMD3_k127_1720176_2 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.983e-218 691.0
MMD3_k127_1720176_20 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 334.0
MMD3_k127_1720176_21 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 324.0
MMD3_k127_1720176_22 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 318.0
MMD3_k127_1720176_23 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 301.0
MMD3_k127_1720176_24 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 293.0
MMD3_k127_1720176_25 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 294.0
MMD3_k127_1720176_26 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 301.0
MMD3_k127_1720176_27 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002231 297.0
MMD3_k127_1720176_28 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008015 282.0
MMD3_k127_1720176_29 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002084 258.0
MMD3_k127_1720176_3 Formate dehydrogenase alpha subunit K00123,K05299,K22341 - 1.17.1.10,1.17.1.11,1.17.1.9 1.202e-199 636.0
MMD3_k127_1720176_30 Sulfite reductase, subunit A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005253 255.0
MMD3_k127_1720176_31 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000002015 248.0
MMD3_k127_1720176_32 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004373 250.0
MMD3_k127_1720176_33 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000319 243.0
MMD3_k127_1720176_34 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005718 250.0
MMD3_k127_1720176_35 NOG31153 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000000000000000000003138 237.0
MMD3_k127_1720176_36 ATP synthase subunit D K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000000007831 235.0
MMD3_k127_1720176_37 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000006379 229.0
MMD3_k127_1720176_38 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000001662 233.0
MMD3_k127_1720176_39 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000001897 228.0
MMD3_k127_1720176_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 1.276e-199 637.0
MMD3_k127_1720176_40 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000001288 220.0
MMD3_k127_1720176_41 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000001885 213.0
MMD3_k127_1720176_42 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000001168 207.0
MMD3_k127_1720176_43 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.00000000000000000000000000000000000000000000000000009511 190.0
MMD3_k127_1720176_44 Domain of unknown function (DUF4118) - - - 0.0000000000000000000000000000000000000000000000000001828 194.0
MMD3_k127_1720176_45 AMMECR1 K06990,K09141 - - 0.0000000000000000000000000000000000000000000000000002485 191.0
MMD3_k127_1720176_46 - - - - 0.00000000000000000000000000000000000000000004921 176.0
MMD3_k127_1720176_47 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000005655 169.0
MMD3_k127_1720176_48 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000000000000002267 149.0
MMD3_k127_1720176_49 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000917 144.0
MMD3_k127_1720176_5 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 548.0
MMD3_k127_1720176_51 DUF218 domain - - - 0.000000000000000000000000000002694 130.0
MMD3_k127_1720176_52 - - - - 0.000000000000000000000468 97.0
MMD3_k127_1720176_53 OsmC-like protein K07397 - - 0.000000000000000000006542 98.0
MMD3_k127_1720176_54 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.0000000000000000007532 91.0
MMD3_k127_1720176_55 oxidase, subunit IV K02277 - 1.9.3.1 0.00000000000000000214 87.0
MMD3_k127_1720176_56 - - - - 0.00000000000000000524 90.0
MMD3_k127_1720176_58 lyase activity - - - 0.00000000000001601 78.0
MMD3_k127_1720176_59 Phosphopantetheine attachment site K02078 - - 0.0000000000003312 75.0
MMD3_k127_1720176_6 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 511.0
MMD3_k127_1720176_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 503.0
MMD3_k127_1720176_8 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 471.0
MMD3_k127_1720176_9 Beta-ketoacyl synthase, C-terminal domain K09458,K14660 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 463.0
MMD3_k127_1728367_0 Domain in cystathionine beta-synthase and other proteins. K07182 - - 1.462e-200 643.0
MMD3_k127_1728367_1 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 588.0
MMD3_k127_1728367_10 PAS domain containing protein K03406,K13924,K14986 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000000000002753 182.0
MMD3_k127_1728367_11 Beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000000000000000000000002124 169.0
MMD3_k127_1728367_12 copper resistance K07245,K14166 - - 0.00000000000000000000000000000000000000008215 171.0
MMD3_k127_1728367_13 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000003556 139.0
MMD3_k127_1728367_14 Evidence 5 No homology to any previously reported sequences K07156,K07245,K14166 - - 0.000000000000000000000000000000001503 134.0
MMD3_k127_1728367_15 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000001752 120.0
MMD3_k127_1728367_16 Response regulator receiver - - - 0.00000000000000000000000004109 112.0
MMD3_k127_1728367_17 formate dehydrogenase K03620 - - 0.0000000000000000000000008364 113.0
MMD3_k127_1728367_18 Bacterial protein of unknown function (DUF922) - - - 0.00000000000000000000001368 109.0
MMD3_k127_1728367_19 Membrane - - - 0.00000000000000000000002607 116.0
MMD3_k127_1728367_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 508.0
MMD3_k127_1728367_20 - - - - 0.0000000000000000000002053 107.0
MMD3_k127_1728367_21 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000074 90.0
MMD3_k127_1728367_22 nitrogen regulatory protein P-II K04751,K04752 - - 0.0000000000000004613 81.0
MMD3_k127_1728367_23 - - - - 0.0000000000003039 74.0
MMD3_k127_1728367_24 - - - - 0.0000000000003615 72.0
MMD3_k127_1728367_25 Short C-terminal domain K08982 - - 0.000000000003837 69.0
MMD3_k127_1728367_26 Protein of unknown function (DUF1375) - - - 0.000000003583 63.0
MMD3_k127_1728367_27 YtkA-like - - - 0.000000009148 62.0
MMD3_k127_1728367_28 HEPN domain - - - 0.0000000214 60.0
MMD3_k127_1728367_29 Cytochrome c554 and c-prime K03620 - - 0.000003098 58.0
MMD3_k127_1728367_3 Cytochrome b subunit of the bc complex K15879 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 376.0
MMD3_k127_1728367_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000451 266.0
MMD3_k127_1728367_5 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007312 259.0
MMD3_k127_1728367_6 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001545 227.0
MMD3_k127_1728367_7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000001 225.0
MMD3_k127_1728367_8 Methylpurine-DNA glycosylase (MPG) K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000005507 220.0
MMD3_k127_1728367_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000002156 200.0
MMD3_k127_1730158_0 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000002097 133.0
MMD3_k127_1730158_1 lipoprotein involved in nitrous oxide reduction - - - 0.000000000004189 71.0
MMD3_k127_1730158_2 Tetratricopeptide repeat - - - 0.000001416 52.0
MMD3_k127_1730158_3 Domain of unknown function (DUF4418) - - - 0.00002984 52.0
MMD3_k127_1753369_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 495.0
MMD3_k127_1753369_1 PFAM 4Fe-4S K00184 - - 0.00000000000000000000000002631 108.0
MMD3_k127_1753369_2 - - - - 0.000607 47.0
MMD3_k127_176451_0 PFAM Metallophosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 374.0
MMD3_k127_176451_1 PFAM Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000001826 270.0
MMD3_k127_176451_2 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000008101 207.0
MMD3_k127_176451_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000006073 156.0
MMD3_k127_176451_4 PFAM Transposase, IS605 OrfB K07496 - - 0.00000001854 61.0
MMD3_k127_1776721_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006078 250.0
MMD3_k127_1776721_1 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000000000000000000000000007058 208.0
MMD3_k127_1776721_2 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000001947 160.0
MMD3_k127_1776721_3 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000001401 111.0
MMD3_k127_1776721_4 phosphorelay sensor kinase activity K03320,K03407 - 2.7.13.3 0.00000000000000005147 81.0
MMD3_k127_178731_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 8.532e-209 662.0
MMD3_k127_178731_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 441.0
MMD3_k127_178731_10 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000001098 68.0
MMD3_k127_178731_11 - - - - 0.0000007376 54.0
MMD3_k127_178731_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 351.0
MMD3_k127_178731_3 cytochrome complex assembly - - - 0.00000000000000000000000000000000000000000000000000000001143 206.0
MMD3_k127_178731_4 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000003112 173.0
MMD3_k127_178731_5 regulation of translation K03530 - - 0.00000000000000000000000000000000000004875 145.0
MMD3_k127_178731_6 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000000003516 142.0
MMD3_k127_178731_7 cytochrome c biogenesis protein - - - 0.0000000000000000000000000000001119 134.0
MMD3_k127_178731_8 PFAM Outer membrane lipoprotein Slp K07285 - - 0.0000000000000000000000000005866 119.0
MMD3_k127_1831947_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1111.0
MMD3_k127_1831947_1 TRCF K03723 - - 1.05e-280 902.0
MMD3_k127_1831947_10 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009811 303.0
MMD3_k127_1831947_11 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 297.0
MMD3_k127_1831947_12 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 289.0
MMD3_k127_1831947_13 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007274 254.0
MMD3_k127_1831947_14 response regulator K02658 - - 0.00000000000000000000000000000000000000000000000000000000006972 221.0
MMD3_k127_1831947_15 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000005517 197.0
MMD3_k127_1831947_16 Protein of unknown function (DUF3494) - - - 0.000000000000000000000000000000000000000000000000000001632 204.0
MMD3_k127_1831947_17 SurA N-terminal domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000001918 188.0
MMD3_k127_1831947_18 Smr domain - - - 0.00000000000000000000000000000000000000009771 159.0
MMD3_k127_1831947_19 Twitching motility two-component system response regulator PilH K02658 - - 0.000000000000000000000000000000000000000144 153.0
MMD3_k127_1831947_2 isocitrate dehydrogenase activity K00031 GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 565.0
MMD3_k127_1831947_20 PFAM response regulator receiver - - - 0.0000000000000000000000000000000007799 134.0
MMD3_k127_1831947_21 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000003408 133.0
MMD3_k127_1831947_22 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000003192 137.0
MMD3_k127_1831947_23 response regulator - - - 0.000000000000000000000006751 116.0
MMD3_k127_1831947_24 GIY-YIG catalytic domain K07461 - - 0.000000000000000000001061 98.0
MMD3_k127_1831947_25 Two component signalling adaptor domain K03408 - - 0.000000000000005295 81.0
MMD3_k127_1831947_26 PFAM CheW-like domain K03408 - - 0.0000000001253 68.0
MMD3_k127_1831947_27 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.00000001547 64.0
MMD3_k127_1831947_28 PFAM CheW domain protein K03408 - - 0.0000005113 57.0
MMD3_k127_1831947_3 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 520.0
MMD3_k127_1831947_4 two-component system, chemotaxis family, sensor kinase CheA with response regulator domain K02487,K06596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 466.0
MMD3_k127_1831947_5 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 384.0
MMD3_k127_1831947_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 374.0
MMD3_k127_1831947_7 Serine dehydrogenase proteinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 345.0
MMD3_k127_1831947_8 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 323.0
MMD3_k127_1831947_9 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 309.0
MMD3_k127_183438_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000007983 171.0
MMD3_k127_183438_1 Prokaryotic N-terminal methylation motif - - - 0.0000003276 59.0
MMD3_k127_1910530_0 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 534.0
MMD3_k127_1910530_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 484.0
MMD3_k127_1910530_10 Poly A polymerase, head domain K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000006978 248.0
MMD3_k127_1910530_11 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000004505 216.0
MMD3_k127_1910530_12 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000004832 210.0
MMD3_k127_1910530_13 metalloendopeptidase activity K03799 - - 0.000000000000000000000000000000000000000000000000000003159 211.0
MMD3_k127_1910530_14 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000201 190.0
MMD3_k127_1910530_15 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000000000000000000000000000000000000000000005316 190.0
MMD3_k127_1910530_16 Domain of unknown function (DUF4145) - - - 0.000000000000000000000000000000000000000000000001633 184.0
MMD3_k127_1910530_17 PFAM Formiminotransferase-cyclodeaminase - - - 0.000000000000000000000000000000000000000005336 165.0
MMD3_k127_1910530_18 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000003818 154.0
MMD3_k127_1910530_19 Domain of unknown function (DUF296) - - - 0.00000000000000000000000000000000000008195 146.0
MMD3_k127_1910530_2 Ecdysteroid kinase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 462.0
MMD3_k127_1910530_20 helix_turn_helix, mercury resistance K13640 - - 0.000000000000000000000000003207 116.0
MMD3_k127_1910530_22 - - - - 0.0000000000001232 73.0
MMD3_k127_1910530_3 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 395.0
MMD3_k127_1910530_4 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 384.0
MMD3_k127_1910530_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 356.0
MMD3_k127_1910530_6 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 345.0
MMD3_k127_1910530_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 327.0
MMD3_k127_1910530_8 phosphorelay signal transduction system K02535,K13599,K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 321.0
MMD3_k127_1910530_9 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000000000000000003521 239.0
MMD3_k127_1941696_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009345 244.0
MMD3_k127_1941696_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000001631 204.0
MMD3_k127_1941696_2 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000009533 181.0
MMD3_k127_1941696_3 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001005 109.0
MMD3_k127_1941696_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000005641 71.0
MMD3_k127_1943123_0 B-1 B cell differentiation - - - 0.0002687 53.0
MMD3_k127_195184_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.0 1325.0
MMD3_k127_195184_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 422.0
MMD3_k127_195184_10 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000001593 83.0
MMD3_k127_195184_11 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000001223 76.0
MMD3_k127_195184_12 Tetratricopeptide repeat - - - 0.00000000000001562 81.0
MMD3_k127_195184_13 NosL K19342 - - 0.0000000001517 67.0
MMD3_k127_195184_14 Domain of unknown function (DUF4418) - - - 0.0000003822 57.0
MMD3_k127_195184_15 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.00001141 57.0
MMD3_k127_195184_2 Biotin-lipoyl like K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 375.0
MMD3_k127_195184_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 349.0
MMD3_k127_195184_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 334.0
MMD3_k127_195184_5 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000005456 246.0
MMD3_k127_195184_6 transcriptional regulator - GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000357 199.0
MMD3_k127_195184_7 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000002989 197.0
MMD3_k127_195184_8 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000002743 179.0
MMD3_k127_195184_9 formate dehydrogenase - - - 0.0000000000000000000000000000000233 133.0
MMD3_k127_1976866_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000003525 220.0
MMD3_k127_1976866_1 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000000000000000000000000000000005079 159.0
MMD3_k127_1976866_2 Tetratricopeptide repeat - - - 0.000946 51.0
MMD3_k127_1990324_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 317.0
MMD3_k127_1990324_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000003091 124.0
MMD3_k127_1990324_2 Universal stress protein family - - - 0.00000000000000000000002997 105.0
MMD3_k127_1990324_3 Segregation and condensation protein ScpA K05896 - - 0.000000000000001264 78.0
MMD3_k127_1990324_4 ABC transporter transmembrane region K06147 - - 0.000000005265 68.0
MMD3_k127_1990324_6 Hemerythrin HHE cation binding domain K07216 - - 0.0004604 43.0
MMD3_k127_2046532_0 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000764 259.0
MMD3_k127_2046532_1 RmlD substrate binding domain K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000412 204.0
MMD3_k127_2080569_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01582,K01585 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008923,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.1.1.18,4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 591.0
MMD3_k127_2080569_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 555.0
MMD3_k127_2080569_10 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000001634 218.0
MMD3_k127_2080569_11 Shikimate / quinate 5-dehydrogenase K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000005438 214.0
MMD3_k127_2080569_12 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000008471 196.0
MMD3_k127_2080569_13 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000006523 140.0
MMD3_k127_2080569_14 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000001716 136.0
MMD3_k127_2080569_15 response regulator, receiver - - - 0.0000000000000000000000000000001419 131.0
MMD3_k127_2080569_16 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000001202 118.0
MMD3_k127_2080569_17 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000004238 108.0
MMD3_k127_2080569_18 TfoX N-terminal domain - - - 0.000000000000000000002228 98.0
MMD3_k127_2080569_19 Cysteine-rich small domain K07162 - - 0.00000000000000000001405 94.0
MMD3_k127_2080569_2 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 515.0
MMD3_k127_2080569_20 Protein of unknown function DUF116 - - - 0.000000000000000001535 95.0
MMD3_k127_2080569_21 PAS fold - - - 0.000000000000000002533 93.0
MMD3_k127_2080569_22 - - - - 0.000000000000000832 80.0
MMD3_k127_2080569_23 Universal stress protein - - - 0.000000000000002731 86.0
MMD3_k127_2080569_24 cell adhesion involved in biofilm formation - - - 0.0000000000002702 83.0
MMD3_k127_2080569_25 PFAM blue (type 1) copper domain protein K00728,K01179,K13669 - 2.4.1.109,3.2.1.4 0.0000000000007686 82.0
MMD3_k127_2080569_26 cellulose binding K01179 - 3.2.1.4 0.000000000001337 81.0
MMD3_k127_2080569_27 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0010487,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0043919,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000636 66.0
MMD3_k127_2080569_28 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000001388 65.0
MMD3_k127_2080569_29 HEAT-like repeat - - - 0.00000009266 61.0
MMD3_k127_2080569_3 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 501.0
MMD3_k127_2080569_30 Serine threonine protein kinase - - - 0.000001866 52.0
MMD3_k127_2080569_31 PFAM YHS domain K00441 - 1.12.98.1 0.0001938 48.0
MMD3_k127_2080569_32 DsrE/DsrF-like family - - - 0.0004055 49.0
MMD3_k127_2080569_33 His Kinase A (phosphoacceptor) domain - - - 0.0006472 48.0
MMD3_k127_2080569_34 YCII-related domain K09780 - - 0.0007497 46.0
MMD3_k127_2080569_4 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 306.0
MMD3_k127_2080569_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000055 292.0
MMD3_k127_2080569_6 Unusual protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 296.0
MMD3_k127_2080569_7 metallopeptidase activity K01113,K09607 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007042 289.0
MMD3_k127_2080569_8 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000003212 261.0
MMD3_k127_2080569_9 Integral membrane protein TerC family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000383 218.0
MMD3_k127_2083321_0 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 601.0
MMD3_k127_2083321_1 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 528.0
MMD3_k127_2083321_2 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 379.0
MMD3_k127_2083321_3 Metalloenzyme superfamily K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 352.0
MMD3_k127_2083321_4 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000001497 152.0
MMD3_k127_2083321_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000005537 119.0
MMD3_k127_2083321_6 Molybdopterin converting factor, small subunit K03636 - - 0.00000000000000000000000000008536 119.0
MMD3_k127_2083321_7 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000000000006358 112.0
MMD3_k127_2083321_8 Sulfurtransferase TusA - - - 0.0000000000000000000000008447 106.0
MMD3_k127_2083321_9 NIL - - - 0.00000000000000000000001911 102.0
MMD3_k127_2135483_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.461e-214 672.0
MMD3_k127_2135483_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 578.0
MMD3_k127_2135483_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 317.0
MMD3_k127_2135483_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000204 279.0
MMD3_k127_2135483_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000003733 231.0
MMD3_k127_2135483_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000003216 139.0
MMD3_k127_2138125_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.567e-257 811.0
MMD3_k127_2138125_1 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 582.0
MMD3_k127_2138125_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001596 269.0
MMD3_k127_2138125_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002126 263.0
MMD3_k127_2138125_12 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000005868 236.0
MMD3_k127_2138125_14 pathogenesis K07004,K18195 - 4.2.2.23 0.000000000000000000000793 111.0
MMD3_k127_2138125_15 - - - - 0.0000000001141 74.0
MMD3_k127_2138125_16 - - - - 0.00009641 49.0
MMD3_k127_2138125_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 556.0
MMD3_k127_2138125_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 480.0
MMD3_k127_2138125_4 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 458.0
MMD3_k127_2138125_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 374.0
MMD3_k127_2138125_8 peptidyl-prolyl cis-trans isomerase activity K03770,K03771,K07533 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 335.0
MMD3_k127_2138125_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001205 276.0
MMD3_k127_2142799_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.03e-257 803.0
MMD3_k127_2142799_1 Heat shock 70 kDa protein K04043 - - 3.235e-236 739.0
MMD3_k127_2142799_10 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 379.0
MMD3_k127_2142799_11 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 358.0
MMD3_k127_2142799_12 PFAM Isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001814 269.0
MMD3_k127_2142799_13 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004316 252.0
MMD3_k127_2142799_14 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000012 241.0
MMD3_k127_2142799_15 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000003024 226.0
MMD3_k127_2142799_16 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000008129 224.0
MMD3_k127_2142799_17 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000001004 229.0
MMD3_k127_2142799_18 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000002003 223.0
MMD3_k127_2142799_19 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000001387 215.0
MMD3_k127_2142799_2 Domain of unknown function (DUF4139) - - - 1.833e-200 636.0
MMD3_k127_2142799_20 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000353 201.0
MMD3_k127_2142799_21 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000001495 196.0
MMD3_k127_2142799_22 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000009621 196.0
MMD3_k127_2142799_23 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000002954 197.0
MMD3_k127_2142799_24 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000006353 188.0
MMD3_k127_2142799_25 diguanylate cyclase K02488,K21022 - 2.7.7.65 0.00000000000000000000000000000000000000000000001261 183.0
MMD3_k127_2142799_26 TPM domain - - - 0.0000000000000000000000000000000000000000000073 174.0
MMD3_k127_2142799_27 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.0000000000000000000000000000000000000699 145.0
MMD3_k127_2142799_28 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000001472 140.0
MMD3_k127_2142799_29 PFAM phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000001177 141.0
MMD3_k127_2142799_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 559.0
MMD3_k127_2142799_30 - - - - 0.00000000000000000000000000001787 123.0
MMD3_k127_2142799_31 - - - - 0.000000000000000000000009092 108.0
MMD3_k127_2142799_32 Protein of unknown function (DUF1622) - - - 0.000000000000000000008414 95.0
MMD3_k127_2142799_33 Putative zinc-finger - - - 0.000000000000000001348 98.0
MMD3_k127_2142799_34 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000005147 81.0
MMD3_k127_2142799_35 Glutaredoxin K03676 - - 0.0000002207 53.0
MMD3_k127_2142799_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 490.0
MMD3_k127_2142799_40 radical SAM domain protein - - - 0.0001912 48.0
MMD3_k127_2142799_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 470.0
MMD3_k127_2142799_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 447.0
MMD3_k127_2142799_7 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 408.0
MMD3_k127_2142799_8 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 416.0
MMD3_k127_2142799_9 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 404.0
MMD3_k127_2150677_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 532.0
MMD3_k127_2150677_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 426.0
MMD3_k127_2150677_10 Phosphopantetheine attachment site - - - 0.00000000004012 66.0
MMD3_k127_2150677_11 FabA-like domain K02372 - 4.2.1.59 0.0000005419 54.0
MMD3_k127_2150677_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 338.0
MMD3_k127_2150677_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 316.0
MMD3_k127_2150677_4 COG1233 Phytoene dehydrogenase and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000001742 250.0
MMD3_k127_2150677_5 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000599 235.0
MMD3_k127_2150677_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000001206 142.0
MMD3_k127_2150677_7 response regulator K02667 - - 0.0000000000000000000000000001737 122.0
MMD3_k127_2150677_8 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000004914 108.0
MMD3_k127_2150677_9 Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol K00559 GO:0003674,GO:0003824,GO:0003838,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005811,GO:0005886,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008202,GO:0008204,GO:0008610,GO:0008757,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016740,GO:0016741,GO:0019867,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032259,GO:0035690,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0071944,GO:0097384,GO:0098588,GO:0098805,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653 2.1.1.41 0.00000000000000004101 91.0
MMD3_k127_2243706_0 PFAM DNA topoisomerase type IA zn finger domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007143 282.0
MMD3_k127_2243706_2 LysM domain K16291 - - 0.0000000000000000000000009877 108.0
MMD3_k127_227652_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 391.0
MMD3_k127_2287474_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.00000000000000000000000000000000000002777 145.0
MMD3_k127_2287474_1 Nitrate reductase gamma subunit - - - 0.00000002877 64.0
MMD3_k127_2312554_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1075.0
MMD3_k127_2312554_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 1.778e-302 935.0
MMD3_k127_2312554_10 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 549.0
MMD3_k127_2312554_11 Nicotinic acid phosphoribosyltransferase K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 536.0
MMD3_k127_2312554_12 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 521.0
MMD3_k127_2312554_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 490.0
MMD3_k127_2312554_14 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 490.0
MMD3_k127_2312554_15 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 487.0
MMD3_k127_2312554_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 481.0
MMD3_k127_2312554_17 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 376.0
MMD3_k127_2312554_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 333.0
MMD3_k127_2312554_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 307.0
MMD3_k127_2312554_2 GTP-binding protein TypA K06207 - - 1.476e-267 837.0
MMD3_k127_2312554_20 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 309.0
MMD3_k127_2312554_21 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 297.0
MMD3_k127_2312554_22 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 294.0
MMD3_k127_2312554_23 PFAM Glycosyl hydrolase family 3 N terminal domain K01207,K05349 - 3.2.1.21,3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000001074 280.0
MMD3_k127_2312554_24 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002817 248.0
MMD3_k127_2312554_25 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000002163 211.0
MMD3_k127_2312554_26 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000002189 207.0
MMD3_k127_2312554_27 NADH ubiquinone oxidoreductase 24 kD subunit K00334 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0050136,GO:0051536,GO:0051537,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000002063 194.0
MMD3_k127_2312554_28 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000004796 194.0
MMD3_k127_2312554_29 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000399 185.0
MMD3_k127_2312554_3 PFAM Transketolase K00615 - 2.2.1.1 1.133e-256 805.0
MMD3_k127_2312554_30 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000005154 163.0
MMD3_k127_2312554_31 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000007247 162.0
MMD3_k127_2312554_32 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000003489 160.0
MMD3_k127_2312554_33 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000001284 152.0
MMD3_k127_2312554_34 Domain of unknown function (DUF4912) K09942 - - 0.000000000000000000000000000000000000007639 157.0
MMD3_k127_2312554_35 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000001797 148.0
MMD3_k127_2312554_36 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000005439 129.0
MMD3_k127_2312554_37 lipoprotein transporter activity - - - 0.000000000000000000000000001112 116.0
MMD3_k127_2312554_38 bacterial (prokaryotic) histone like domain K04764 - - 0.000000000000000000000000003891 115.0
MMD3_k127_2312554_39 Ferredoxin K05337 - - 0.00000000000000000001541 93.0
MMD3_k127_2312554_4 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 1.149e-256 805.0
MMD3_k127_2312554_5 Domain of unknown function (DUF1957) K16149 - 2.4.1.18 1.601e-244 765.0
MMD3_k127_2312554_6 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 7.229e-209 656.0
MMD3_k127_2312554_7 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 610.0
MMD3_k127_2312554_8 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 556.0
MMD3_k127_2312554_9 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 575.0
MMD3_k127_2322760_0 Protein involved in outer membrane biogenesis - - - 1.553e-248 800.0
MMD3_k127_2322760_1 PFAM MscS Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 336.0
MMD3_k127_2322760_2 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000000009765 117.0
MMD3_k127_2322760_3 Probable transposase - - - 0.0000000000000000001198 92.0
MMD3_k127_2322760_4 Prokaryotic dksA/traR C4-type zinc finger K11261 - 1.2.7.12 0.000000000000000003273 92.0
MMD3_k127_2341355_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1688.0
MMD3_k127_2341355_1 DNA topoisomerase II activity K02469 - 5.99.1.3 1.266e-317 992.0
MMD3_k127_2341355_10 DHHA2 domain K15986 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 554.0
MMD3_k127_2341355_11 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 527.0
MMD3_k127_2341355_12 Ion transport 2 domain protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 500.0
MMD3_k127_2341355_13 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 479.0
MMD3_k127_2341355_14 HD domain K02660,K07315,K07814,K17763 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 482.0
MMD3_k127_2341355_15 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 456.0
MMD3_k127_2341355_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 457.0
MMD3_k127_2341355_17 protein involved in outer membrane biogenesis K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 456.0
MMD3_k127_2341355_18 Sigma-54 interaction domain K02481,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 442.0
MMD3_k127_2341355_19 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 442.0
MMD3_k127_2341355_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 4.196e-303 950.0
MMD3_k127_2341355_20 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 434.0
MMD3_k127_2341355_21 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 425.0
MMD3_k127_2341355_22 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 426.0
MMD3_k127_2341355_23 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 435.0
MMD3_k127_2341355_24 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 413.0
MMD3_k127_2341355_25 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 390.0
MMD3_k127_2341355_26 Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 380.0
MMD3_k127_2341355_27 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377 344.0
MMD3_k127_2341355_28 Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate K15527 - 2.5.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 349.0
MMD3_k127_2341355_29 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 329.0
MMD3_k127_2341355_3 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 2.183e-240 761.0
MMD3_k127_2341355_30 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 323.0
MMD3_k127_2341355_31 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 321.0
MMD3_k127_2341355_32 Methionine synthase, cobalamin (vitamin B12)-binding module, cap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 317.0
MMD3_k127_2341355_33 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 321.0
MMD3_k127_2341355_34 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 319.0
MMD3_k127_2341355_35 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 325.0
MMD3_k127_2341355_36 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 308.0
MMD3_k127_2341355_37 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 311.0
MMD3_k127_2341355_38 HD domain K07023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003679 271.0
MMD3_k127_2341355_39 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001 285.0
MMD3_k127_2341355_4 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 5.119e-214 679.0
MMD3_k127_2341355_40 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000001943 266.0
MMD3_k127_2341355_41 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000226 268.0
MMD3_k127_2341355_42 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005909 268.0
MMD3_k127_2341355_43 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003252 254.0
MMD3_k127_2341355_44 Lytic transglycolase K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000721 252.0
MMD3_k127_2341355_45 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000001232 264.0
MMD3_k127_2341355_46 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000008634 241.0
MMD3_k127_2341355_47 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002707 226.0
MMD3_k127_2341355_48 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000001385 201.0
MMD3_k127_2341355_49 Asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000005162 207.0
MMD3_k127_2341355_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.865e-211 663.0
MMD3_k127_2341355_50 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000008351 206.0
MMD3_k127_2341355_51 ACT domain - - - 0.000000000000000000000000000000000000000000000000000000213 201.0
MMD3_k127_2341355_52 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000006588 184.0
MMD3_k127_2341355_53 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) - - - 0.000000000000000000000000000000000000000000000000007121 185.0
MMD3_k127_2341355_54 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000003569 185.0
MMD3_k127_2341355_55 TIGRFAM iron-sulfur cluster binding protein - - - 0.00000000000000000000000000000000000000000000004061 178.0
MMD3_k127_2341355_56 Adenylate kinase - - - 0.000000000000000000000000000000000000000000001396 173.0
MMD3_k127_2341355_57 PFAM Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000000000000000002246 167.0
MMD3_k127_2341355_58 PFAM thioesterase superfamily K02614 - - 0.00000000000000000000000000000000000000000003594 164.0
MMD3_k127_2341355_59 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000001175 167.0
MMD3_k127_2341355_6 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 615.0
MMD3_k127_2341355_60 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000000382 163.0
MMD3_k127_2341355_61 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000005612 161.0
MMD3_k127_2341355_62 mRNA cleavage and polyadenylation factor CLP1 P-loop K06947 - - 0.000000000000000000000000000000000000000001869 169.0
MMD3_k127_2341355_63 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172 - 1.2.7.1 0.000000000000000000000000000000000000000002173 158.0
MMD3_k127_2341355_64 cobalamin synthesis protein, P47K - - - 0.000000000000000000000000000000000000000003515 166.0
MMD3_k127_2341355_65 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000103 153.0
MMD3_k127_2341355_66 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000007978 130.0
MMD3_k127_2341355_67 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000002362 126.0
MMD3_k127_2341355_68 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000008736 120.0
MMD3_k127_2341355_69 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.000000000000000000000000005886 117.0
MMD3_k127_2341355_7 PFAM Xanthine uracil vitamin C permease K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 604.0
MMD3_k127_2341355_70 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000009379 105.0
MMD3_k127_2341355_71 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000005603 103.0
MMD3_k127_2341355_72 SMART Rhodanese domain protein - - - 0.000000000000000000001003 99.0
MMD3_k127_2341355_73 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000004273 87.0
MMD3_k127_2341355_74 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.000000000000006716 83.0
MMD3_k127_2341355_75 - - - - 0.0000000000001769 76.0
MMD3_k127_2341355_76 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000001834 76.0
MMD3_k127_2341355_77 peptidyl-tyrosine sulfation - - - 0.0000000000002478 79.0
MMD3_k127_2341355_78 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000002055 60.0
MMD3_k127_2341355_79 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000001422 54.0
MMD3_k127_2341355_8 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 574.0
MMD3_k127_2341355_80 - K06039,K07092 - - 0.00002139 53.0
MMD3_k127_2341355_81 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00002354 48.0
MMD3_k127_2341355_83 cheY-homologous receiver domain - - - 0.0006044 48.0
MMD3_k127_2341355_84 Resolvase, N terminal domain - - - 0.0006651 42.0
MMD3_k127_2341355_9 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 568.0
MMD3_k127_237884_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 359.0
MMD3_k127_237884_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 302.0
MMD3_k127_237884_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000006511 254.0
MMD3_k127_237884_3 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009512 252.0
MMD3_k127_237884_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000003622 242.0
MMD3_k127_237884_5 - - - - 0.0000000000000000000000000000000007713 142.0
MMD3_k127_237884_6 heat shock protein binding - - - 0.00000000000000000000004015 105.0
MMD3_k127_237884_7 Domain of unknown function (DUF3786) - - - 0.00000000002251 72.0
MMD3_k127_237884_8 Fic/DOC family - - - 0.0001291 46.0
MMD3_k127_2492237_0 Domain of unknown function (DUF4976) - - - 0.000000000000000000000000000000000000486 143.0
MMD3_k127_2492237_1 - - - - 0.00004587 46.0
MMD3_k127_2615853_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1031.0
MMD3_k127_2615853_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 7.156e-207 676.0
MMD3_k127_2615853_10 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 300.0
MMD3_k127_2615853_11 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 310.0
MMD3_k127_2615853_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 306.0
MMD3_k127_2615853_13 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 289.0
MMD3_k127_2615853_14 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001944 277.0
MMD3_k127_2615853_15 Belongs to the ompA family K12216 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007325 246.0
MMD3_k127_2615853_16 Cytidylate kinase K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000009325 242.0
MMD3_k127_2615853_17 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001619 234.0
MMD3_k127_2615853_18 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000004533 230.0
MMD3_k127_2615853_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000002728 228.0
MMD3_k127_2615853_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 7.704e-194 619.0
MMD3_k127_2615853_20 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000126 217.0
MMD3_k127_2615853_21 Protein of unknown function (DUF3124) - - - 0.0000000000000000000000000000000000000000000000000000000181 201.0
MMD3_k127_2615853_22 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000004251 194.0
MMD3_k127_2615853_23 bacterial (prokaryotic) histone like domain K05788 - - 0.00000000000000000000000000001839 121.0
MMD3_k127_2615853_24 Class III cytochrome C family - - - 0.0000000000000007774 85.0
MMD3_k127_2615853_25 YtxH-like protein - - - 0.0000000000006492 72.0
MMD3_k127_2615853_3 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009363 475.0
MMD3_k127_2615853_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 478.0
MMD3_k127_2615853_5 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 430.0
MMD3_k127_2615853_6 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 419.0
MMD3_k127_2615853_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 406.0
MMD3_k127_2615853_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 366.0
MMD3_k127_2615853_9 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 325.0
MMD3_k127_2663063_0 Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000001108 166.0
MMD3_k127_2663063_1 Protein of unknown function (DUF3617) - - - 0.000000000000000000000002587 106.0
MMD3_k127_2679489_0 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 565.0
MMD3_k127_2679489_1 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 498.0
MMD3_k127_2679489_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000108 184.0
MMD3_k127_2679489_11 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000001559 175.0
MMD3_k127_2679489_12 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15268 - - 0.000000000000000000000000000000000000000000004575 176.0
MMD3_k127_2679489_13 - - - - 0.0000000000000000000000000000000000000000003576 164.0
MMD3_k127_2679489_14 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000001518 159.0
MMD3_k127_2679489_15 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000001708 160.0
MMD3_k127_2679489_16 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000000000000000000000008747 154.0
MMD3_k127_2679489_17 methyltransferase - - - 0.0000000000000000000000000000000000001413 150.0
MMD3_k127_2679489_18 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330,K22340 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000000000000000000000001052 137.0
MMD3_k127_2679489_19 DRTGG domain - - - 0.000000000000000000000000000000027 129.0
MMD3_k127_2679489_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 471.0
MMD3_k127_2679489_20 DRTGG domain protein - - - 0.0000000000000000000000001527 114.0
MMD3_k127_2679489_3 phosphorelay signal transduction system K07712,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 422.0
MMD3_k127_2679489_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 350.0
MMD3_k127_2679489_5 Signal transduction histidine kinase, nitrogen specific, NtrB K07708,K10942 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003478 283.0
MMD3_k127_2679489_6 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000003155 238.0
MMD3_k127_2679489_7 Domain in cystathionine beta-synthase and other proteins. K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000001808 243.0
MMD3_k127_2679489_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
MMD3_k127_2679489_9 PHP-associated K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000006298 200.0
MMD3_k127_269625_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 543.0
MMD3_k127_269625_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002854 267.0
MMD3_k127_269625_3 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000001159 226.0
MMD3_k127_269625_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000002072 215.0
MMD3_k127_269625_5 COGs COG2244 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00000000000000000000000000000000000000000000000000000001666 216.0
MMD3_k127_269625_6 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000274 159.0
MMD3_k127_269625_7 Glycosyl transferase family 21 - - - 0.00000000000000000003594 97.0
MMD3_k127_269625_8 Parallel beta-helix repeats - - - 0.0000000000000002375 92.0
MMD3_k127_269625_9 Right handed beta helix region - - - 0.0000000002452 73.0
MMD3_k127_2762829_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 598.0
MMD3_k127_2762829_1 Clp protease K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 314.0
MMD3_k127_2762829_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 305.0
MMD3_k127_2762829_3 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000003784 230.0
MMD3_k127_2762829_4 Ferrous iron transport protein B K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000001034 206.0
MMD3_k127_27874_0 TIGRFAM cytochrome C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 565.0
MMD3_k127_27874_1 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 417.0
MMD3_k127_27874_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261 - 1.4.1.2,1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 393.0
MMD3_k127_27874_3 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 336.0
MMD3_k127_27874_4 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 316.0
MMD3_k127_27874_5 anaerobic respiration - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000366 252.0
MMD3_k127_27874_6 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000002183 187.0
MMD3_k127_27874_7 Nitroreductase - - - 0.00000000000000000000000000000004528 132.0
MMD3_k127_27874_8 peptidyl-tyrosine sulfation - - - 0.00000000000000000000005725 105.0
MMD3_k127_27874_9 GtrA-like protein - - - 0.000000002355 69.0
MMD3_k127_2799671_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 337.0
MMD3_k127_2799671_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000003197 185.0
MMD3_k127_2799671_2 cytochrome C peroxidase - - - 0.0000000000000000291 85.0
MMD3_k127_2799671_3 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00004519 48.0
MMD3_k127_2915775_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 3.675e-253 805.0
MMD3_k127_2915775_1 Sugar (and other) transporter K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 608.0
MMD3_k127_2915775_10 Exopolysaccharide biosynthesis protein YbjH - - - 0.000000002826 63.0
MMD3_k127_2915775_2 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 424.0
MMD3_k127_2915775_3 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 345.0
MMD3_k127_2915775_4 PFAM MltA K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 326.0
MMD3_k127_2915775_5 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 308.0
MMD3_k127_2915775_6 Domain of unknown function (DUF1848) - - - 0.000000000000000000000000000000000000000000000000000000000000000000008771 245.0
MMD3_k127_2915775_9 Exopolysaccharide biosynthesis protein YbjH - - - 0.0000000000001476 73.0
MMD3_k127_2972945_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 504.0
MMD3_k127_2972945_1 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 499.0
MMD3_k127_2972945_10 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000002969 78.0
MMD3_k127_2972945_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652,K01906 - 2.3.1.29,2.3.1.47,6.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 395.0
MMD3_k127_2972945_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 319.0
MMD3_k127_2972945_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000001379 246.0
MMD3_k127_2972945_5 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000003347 231.0
MMD3_k127_2972945_6 6-carboxyhexanoate--CoA ligase K01906 - 6.2.1.14 0.000000000000000000000000000000000000000000000000000000000000246 221.0
MMD3_k127_2972945_7 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000002956 212.0
MMD3_k127_2972945_8 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000003709 128.0
MMD3_k127_2972945_9 cytochrome C peroxidase - - - 0.0000000000000000004639 92.0
MMD3_k127_2985145_0 Domain of unknown function DUF11 - - - 0.0 3424.0
MMD3_k127_2985145_1 OmpA family - - - 0.0 2134.0
MMD3_k127_2985145_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 505.0
MMD3_k127_2985145_11 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 492.0
MMD3_k127_2985145_12 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 467.0
MMD3_k127_2985145_13 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 444.0
MMD3_k127_2985145_14 PFAM 4Fe-4S K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 432.0
MMD3_k127_2985145_15 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 426.0
MMD3_k127_2985145_16 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 333.0
MMD3_k127_2985145_17 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 313.0
MMD3_k127_2985145_18 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 307.0
MMD3_k127_2985145_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001037 278.0
MMD3_k127_2985145_2 Tetratricopeptide repeat - - - 0.0 1317.0
MMD3_k127_2985145_20 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000504 276.0
MMD3_k127_2985145_21 2Fe-2S -binding domain K13483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002637 256.0
MMD3_k127_2985145_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002208 226.0
MMD3_k127_2985145_23 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000000000008967 214.0
MMD3_k127_2985145_24 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000003895 208.0
MMD3_k127_2985145_25 Protein of unknown function (DUF429) K09147 - - 0.000000000000000000000000000000000000000000000000000000458 199.0
MMD3_k127_2985145_26 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000832 192.0
MMD3_k127_2985145_27 biopolymer transport protein - - - 0.000000000000000000000000000000000000000000000000003863 186.0
MMD3_k127_2985145_28 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000717 192.0
MMD3_k127_2985145_29 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000004084 141.0
MMD3_k127_2985145_3 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.0 1084.0
MMD3_k127_2985145_30 acetyltransferase - - - 0.00000000000000000000000000000001681 131.0
MMD3_k127_2985145_31 Thioesterase superfamily - - - 0.000000000000000000000000000000739 126.0
MMD3_k127_2985145_32 acid phosphatase activity K03651 - 3.1.4.53 0.00000000000000000000000000001589 132.0
MMD3_k127_2985145_33 - - - - 0.00000000000000000000000000461 114.0
MMD3_k127_2985145_34 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000004237 113.0
MMD3_k127_2985145_35 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000008394 104.0
MMD3_k127_2985145_36 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000001018 106.0
MMD3_k127_2985145_37 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.0000000000000000000000128 105.0
MMD3_k127_2985145_39 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000122 100.0
MMD3_k127_2985145_4 Tetratricopeptide repeat - - - 2.006e-290 902.0
MMD3_k127_2985145_40 transcriptional regulator AraC family - - - 0.0000000000000000003901 95.0
MMD3_k127_2985145_41 miRNA mediated inhibition of translation K12035 GO:0000003,GO:0000082,GO:0000278,GO:0000932,GO:0001708,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005912,GO:0005924,GO:0005927,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006464,GO:0006725,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007399,GO:0007517,GO:0007548,GO:0008150,GO:0008152,GO:0008283,GO:0008543,GO:0008544,GO:0009056,GO:0009057,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009913,GO:0009957,GO:0009987,GO:0010033,GO:0010171,GO:0010172,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010586,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010720,GO:0014020,GO:0014070,GO:0016070,GO:0016071,GO:0016203,GO:0016331,GO:0016441,GO:0016458,GO:0016567,GO:0016740,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019787,GO:0019953,GO:0021915,GO:0022402,GO:0022407,GO:0022414,GO:0023052,GO:0030054,GO:0030055,GO:0030154,GO:0030155,GO:0030371,GO:0030674,GO:0030855,GO:0030856,GO:0031047,GO:0031050,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0032268,GO:0032269,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033628,GO:0033632,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0034660,GO:0035148,GO:0035194,GO:0035195,GO:0035196,GO:0035198,GO:0035239,GO:0035278,GO:0035295,GO:0035770,GO:0036211,GO:0036464,GO:0040029,GO:0040033,GO:0040034,GO:0042127,GO:0042221,GO:0043009,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043331,GO:0043412,GO:0043487,GO:0043488,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044706,GO:0044770,GO:0044772,GO:0044843,GO:0045138,GO:0045165,GO:0045182,GO:0045595,GO:0045597,GO:0045604,GO:0045682,GO:0045935,GO:0045974,GO:0046483,GO:0046661,GO:0046700,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048598,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050779,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051716,GO:0051865,GO:0060090,GO:0060147,GO:0060148,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060378,GO:0060429,GO:0060538,GO:0060562,GO:0060606,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0061014,GO:0061061,GO:0061157,GO:0061158,GO:0061630,GO:0061659,GO:0061980,GO:0065007,GO:0065008,GO:0070161,GO:0070647,GO:0070848,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071363,GO:0071407,GO:0071495,GO:0071704,GO:0071774,GO:0072089,GO:0072175,GO:0080090,GO:0090304,GO:0090598,GO:0090727,GO:0097159,GO:0140096,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901698,GO:1901699,GO:1903047,GO:1903311,GO:1903313,GO:1905879,GO:1905881,GO:1990124,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000241,GO:2000243,GO:2000637 2.3.2.27 0.0001315 55.0
MMD3_k127_2985145_5 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.196e-211 678.0
MMD3_k127_2985145_6 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 612.0
MMD3_k127_2985145_7 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 582.0
MMD3_k127_2985145_8 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 569.0
MMD3_k127_2985145_9 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 529.0
MMD3_k127_2989784_0 PFAM Integrase - - - 0.00000000000000000000000000000000000000000000005425 173.0
MMD3_k127_2989784_1 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000001871 115.0
MMD3_k127_2989784_2 PFAM Integrase - - - 0.000000000000000000001626 99.0
MMD3_k127_2989784_3 PFAM Integrase - - - 0.0000000000000000006149 91.0
MMD3_k127_3051199_0 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002631 254.0
MMD3_k127_3051199_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.00000000000000000000000000000000000000000000000000000000000000008342 231.0
MMD3_k127_3070782_0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000005167 252.0
MMD3_k127_3070782_1 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000003303 148.0
MMD3_k127_3085251_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 322.0
MMD3_k127_3085251_1 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000002571 139.0
MMD3_k127_3090113_0 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000001566 145.0
MMD3_k127_3090113_1 CO dehydrogenase K07321 - - 0.000000000000001316 78.0
MMD3_k127_3090113_2 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000002166 73.0
MMD3_k127_3092881_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 285.0
MMD3_k127_3092881_1 Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K13014 GO:0005575,GO:0008150,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0016020,GO:0042221,GO:0050896 - 0.0000000000000000000000000000000000000000000002852 171.0
MMD3_k127_3093674_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 546.0
MMD3_k127_3101393_0 PFAM WD40 domain protein beta Propeller - - - 0.00000000000000000000000000000000000000000000000004874 191.0
MMD3_k127_3125686_0 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003921 235.0
MMD3_k127_3125686_1 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.00000000000000000000000002607 109.0
MMD3_k127_3126059_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.238e-258 807.0
MMD3_k127_3126059_1 Belongs to the RtcB family K14415 - 6.5.1.3 1.215e-213 672.0
MMD3_k127_3126059_10 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 402.0
MMD3_k127_3126059_11 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 389.0
MMD3_k127_3126059_12 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621,K21576,K21577 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.21.4.2,1.21.4.3,1.21.4.4,2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 380.0
MMD3_k127_3126059_13 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 372.0
MMD3_k127_3126059_14 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 342.0
MMD3_k127_3126059_15 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 336.0
MMD3_k127_3126059_16 regulation of RNA biosynthetic process - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 329.0
MMD3_k127_3126059_17 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 330.0
MMD3_k127_3126059_18 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 323.0
MMD3_k127_3126059_19 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 327.0
MMD3_k127_3126059_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 608.0
MMD3_k127_3126059_20 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008919 313.0
MMD3_k127_3126059_21 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 305.0
MMD3_k127_3126059_22 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000001151 238.0
MMD3_k127_3126059_23 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000003484 228.0
MMD3_k127_3126059_24 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000008657 226.0
MMD3_k127_3126059_25 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000001231 231.0
MMD3_k127_3126059_26 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000002081 232.0
MMD3_k127_3126059_27 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000176 225.0
MMD3_k127_3126059_28 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000002075 219.0
MMD3_k127_3126059_29 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000001057 186.0
MMD3_k127_3126059_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 586.0
MMD3_k127_3126059_30 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000004868 178.0
MMD3_k127_3126059_31 GYD domain - - - 0.0000000000000000000000000000000000000007792 149.0
MMD3_k127_3126059_32 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000001366 145.0
MMD3_k127_3126059_33 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000002248 116.0
MMD3_k127_3126059_34 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000002514 117.0
MMD3_k127_3126059_35 Belongs to the UPF0296 family K09777 - - 0.00000000000000000000000007999 110.0
MMD3_k127_3126059_36 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000006394 100.0
MMD3_k127_3126059_37 Thioredoxin domain - - - 0.00000000000000000002476 100.0
MMD3_k127_3126059_38 Protein of unknown function (DUF3187) - - - 0.00000000000000000002721 104.0
MMD3_k127_3126059_39 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000007992 81.0
MMD3_k127_3126059_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 582.0
MMD3_k127_3126059_40 Catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.00000000000002527 78.0
MMD3_k127_3126059_41 12 heme-binding sites - - - 0.000000000002916 71.0
MMD3_k127_3126059_42 Predicted RNA-binding protein - - - 0.000000002744 61.0
MMD3_k127_3126059_43 Stage II sporulation D domain protein K06381 - - 0.00000000657 64.0
MMD3_k127_3126059_44 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000001824 58.0
MMD3_k127_3126059_45 - - - - 0.000002708 60.0
MMD3_k127_3126059_5 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 490.0
MMD3_k127_3126059_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 483.0
MMD3_k127_3126059_7 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 467.0
MMD3_k127_3126059_8 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 455.0
MMD3_k127_3126059_9 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 442.0
MMD3_k127_3171501_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1169.0
MMD3_k127_3171501_1 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 3.602e-232 736.0
MMD3_k127_3171501_2 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 388.0
MMD3_k127_3171501_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 355.0
MMD3_k127_3171501_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000001391 211.0
MMD3_k127_3171501_5 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000002767 187.0
MMD3_k127_3171501_6 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.000000000000000000000000000000000000000000004294 172.0
MMD3_k127_3171501_7 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000001752 131.0
MMD3_k127_3171501_8 - - - - 0.00000002635 61.0
MMD3_k127_3193618_0 Beta-L-arabinofuranosidase, GH127 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 416.0
MMD3_k127_3212361_0 - - - - 0.000000000000000000000000000000000000000000000000003092 195.0
MMD3_k127_3212361_1 domain protein K20276 - - 0.000003026 57.0
MMD3_k127_3225545_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.82e-211 664.0
MMD3_k127_3225545_1 Catalyzes the formation of oxaloacetate from pyruvate K01960 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 364.0
MMD3_k127_328589_0 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 465.0
MMD3_k127_328589_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 449.0
MMD3_k127_328589_10 Transcription termination factor nusG - - - 0.0000000000000000000000000000000000000000002273 165.0
MMD3_k127_328589_11 Bacterial Ig-like domain (group 3) - - - 0.000000000000000000000000000000000000000000752 183.0
MMD3_k127_328589_12 cellulose binding - - - 0.000000000000000000000000005829 130.0
MMD3_k127_328589_13 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000008129 122.0
MMD3_k127_328589_14 - - - - 0.000000000000000000001826 98.0
MMD3_k127_328589_15 Bacterial sugar transferase - - - 0.00001345 52.0
MMD3_k127_328589_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 464.0
MMD3_k127_328589_3 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 352.0
MMD3_k127_328589_4 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 301.0
MMD3_k127_328589_5 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009165 262.0
MMD3_k127_328589_6 AAA domain K08252 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000126 233.0
MMD3_k127_328589_7 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000004296 225.0
MMD3_k127_328589_8 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000003077 171.0
MMD3_k127_328589_9 Putative beta-barrel porin 2 - - - 0.000000000000000000000000000000000000000000005649 179.0
MMD3_k127_3302723_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.00000000000000000000000000007311 119.0
MMD3_k127_3308090_0 PFAM Integrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 388.0
MMD3_k127_3324174_0 Ammonium Transporter K03320 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 366.0
MMD3_k127_3324174_1 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04751,K04752 - - 0.0000000000000000000000000000000000000000000001895 169.0
MMD3_k127_3424895_0 Efflux ABC transporter, permease protein K02004 - - 0.000000000000000000000000000000000000000000000000000000002009 212.0
MMD3_k127_3511303_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 468.0
MMD3_k127_3511303_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 450.0
MMD3_k127_3511303_2 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 364.0
MMD3_k127_3511303_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 324.0
MMD3_k127_3511303_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000113 252.0
MMD3_k127_3511303_5 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000002503 226.0
MMD3_k127_3511303_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000001127 206.0
MMD3_k127_3511303_7 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000001003 192.0
MMD3_k127_3511303_8 O-Antigen ligase K02847 - - 0.00000000000000000007119 103.0
MMD3_k127_3511303_9 GtrA-like protein - - - 0.00000000003266 66.0
MMD3_k127_3515754_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000002791 71.0
MMD3_k127_3515754_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.000000004561 58.0
MMD3_k127_3523109_0 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000004395 229.0
MMD3_k127_3523109_1 - - - - 0.0000000000007559 69.0
MMD3_k127_3523109_2 cell redox homeostasis K02199,K03671 - - 0.00001569 47.0
MMD3_k127_3523109_3 UbiE COQ5 methyltransferase K07755 - 2.1.1.137 0.0002559 44.0
MMD3_k127_3555638_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1038.0
MMD3_k127_3555638_1 Belongs to the peptidase M16 family K07263 - - 0.0 1034.0
MMD3_k127_3555638_10 Sulfatase K01137 - 3.1.6.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 568.0
MMD3_k127_3555638_11 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 562.0
MMD3_k127_3555638_12 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 561.0
MMD3_k127_3555638_13 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 566.0
MMD3_k127_3555638_14 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 545.0
MMD3_k127_3555638_15 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 537.0
MMD3_k127_3555638_16 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 522.0
MMD3_k127_3555638_17 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 468.0
MMD3_k127_3555638_18 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 427.0
MMD3_k127_3555638_19 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 424.0
MMD3_k127_3555638_2 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 3.36e-322 995.0
MMD3_k127_3555638_20 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 427.0
MMD3_k127_3555638_21 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 426.0
MMD3_k127_3555638_22 2Fe-2S iron-sulfur cluster binding domain K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 402.0
MMD3_k127_3555638_23 PFAM ABC transporter related K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 396.0
MMD3_k127_3555638_24 Belongs to the Glu Leu Phe Val dehydrogenases family K00260 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0071704,GO:1901564 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 397.0
MMD3_k127_3555638_25 Diaminopimelate epimerase K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 387.0
MMD3_k127_3555638_26 Nadph-dependent fmn reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 372.0
MMD3_k127_3555638_27 pfam abc K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 362.0
MMD3_k127_3555638_28 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 377.0
MMD3_k127_3555638_29 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 353.0
MMD3_k127_3555638_3 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 6.724e-314 970.0
MMD3_k127_3555638_30 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 324.0
MMD3_k127_3555638_31 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 322.0
MMD3_k127_3555638_32 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 314.0
MMD3_k127_3555638_33 PFAM Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 310.0
MMD3_k127_3555638_34 glyoxalase III activity K13653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 286.0
MMD3_k127_3555638_35 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001036 284.0
MMD3_k127_3555638_36 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001043 289.0
MMD3_k127_3555638_37 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008483 280.0
MMD3_k127_3555638_38 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001289 277.0
MMD3_k127_3555638_39 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002999 269.0
MMD3_k127_3555638_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.26e-243 762.0
MMD3_k127_3555638_40 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001812 288.0
MMD3_k127_3555638_41 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002599 269.0
MMD3_k127_3555638_42 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000445 263.0
MMD3_k127_3555638_43 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001411 256.0
MMD3_k127_3555638_44 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005158 255.0
MMD3_k127_3555638_45 PFAM Cysteine-rich domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004676 258.0
MMD3_k127_3555638_46 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001152 241.0
MMD3_k127_3555638_47 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008076 235.0
MMD3_k127_3555638_48 - - - - 0.000000000000000000000000000000000000000000000000000000000000000009096 231.0
MMD3_k127_3555638_49 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001489 225.0
MMD3_k127_3555638_5 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 3.079e-219 685.0
MMD3_k127_3555638_50 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000002645 216.0
MMD3_k127_3555638_51 THUMP - - - 0.000000000000000000000000000000000000000000000000000000000009254 211.0
MMD3_k127_3555638_52 - - - - 0.000000000000000000000000000000000000000000000000000000001431 217.0
MMD3_k127_3555638_53 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000401 222.0
MMD3_k127_3555638_54 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000266 210.0
MMD3_k127_3555638_55 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000000000007545 196.0
MMD3_k127_3555638_56 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000001309 198.0
MMD3_k127_3555638_57 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000000000000000000000000000000000000000000000000002261 190.0
MMD3_k127_3555638_58 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000000000009338 175.0
MMD3_k127_3555638_59 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000005746 188.0
MMD3_k127_3555638_6 DNA polymerase K02347 - - 1.326e-212 677.0
MMD3_k127_3555638_60 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000004199 170.0
MMD3_k127_3555638_61 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000001383 158.0
MMD3_k127_3555638_62 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000051 174.0
MMD3_k127_3555638_63 PAS fold - - - 0.00000000000000000000000000000000000003692 155.0
MMD3_k127_3555638_64 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000006063 127.0
MMD3_k127_3555638_65 Protein of unknown function, DUF393 - - - 0.00000000000000000000000006286 111.0
MMD3_k127_3555638_66 Methionine biosynthesis protein MetW - - - 0.00000000000000000000007324 106.0
MMD3_k127_3555638_67 Contains one ATP-binding region, ATPase-like domain (IPR003594) - - - 0.00000000000000000000009828 115.0
MMD3_k127_3555638_68 Domain of unknown function (DU1801) - - - 0.0000000000000000000004616 99.0
MMD3_k127_3555638_69 Lamin Tail Domain - - - 0.0000000000000000000021 109.0
MMD3_k127_3555638_7 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 5.257e-207 653.0
MMD3_k127_3555638_70 TIGRFAM regulatory protein, FmdB - - - 0.0000000000000004199 79.0
MMD3_k127_3555638_71 Protein of unknown function (DUF559) - - - 0.000000000000003202 77.0
MMD3_k127_3555638_73 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.000000001226 64.0
MMD3_k127_3555638_74 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000002917 66.0
MMD3_k127_3555638_75 Late embryogenesis abundant protein - - - 0.000000004038 64.0
MMD3_k127_3555638_76 - - - - 0.00000001067 63.0
MMD3_k127_3555638_77 Protein of unknown function (DUF559) - - - 0.0000001186 53.0
MMD3_k127_3555638_78 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000183 58.0
MMD3_k127_3555638_79 TRL-like protein family - - - 0.000003689 56.0
MMD3_k127_3555638_8 - - - - 5.813e-200 629.0
MMD3_k127_3555638_9 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 569.0
MMD3_k127_3576499_0 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 344.0
MMD3_k127_3576499_1 PFAM response regulator receiver - - - 0.000000000000000000006185 97.0
MMD3_k127_3576499_2 response regulator K15012 - - 0.00000005735 55.0
MMD3_k127_358246_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 444.0
MMD3_k127_358246_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005915 268.0
MMD3_k127_358246_3 SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000001725 204.0
MMD3_k127_358246_4 NosL - - - 0.0000000000000000000000000000000003491 135.0
MMD3_k127_358246_5 response to copper ion K07156,K14166 - - 0.000000000000000000000000000000437 127.0
MMD3_k127_358246_6 Copper resistance protein CopC K14166 - - 0.0000000000008391 79.0
MMD3_k127_358246_7 Predicted membrane protein (DUF2318) - - - 0.000000000001819 74.0
MMD3_k127_3586361_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1056.0
MMD3_k127_3586361_1 PFAM ABC transporter related K06020 - 3.6.3.25 8.287e-303 935.0
MMD3_k127_3586361_10 Metal-dependent phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000438 263.0
MMD3_k127_3586361_11 PFAM ATP-grasp domain K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000001619 214.0
MMD3_k127_3586361_12 - - - - 0.0000000000000000000000000000000000000000000000000004279 198.0
MMD3_k127_3586361_13 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000246 166.0
MMD3_k127_3586361_14 4-oxalocrotonate tautomerase - - - 0.00000000000000000000000000000000000000000001214 165.0
MMD3_k127_3586361_15 Cupin domain - - - 0.000000000000000000000000000000000000000009621 156.0
MMD3_k127_3586361_16 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000006748 140.0
MMD3_k127_3586361_17 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000001689 137.0
MMD3_k127_3586361_18 SMART Tetratricopeptide - - - 0.0000000000000000000000000003706 121.0
MMD3_k127_3586361_19 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.0000000000000000000000003699 113.0
MMD3_k127_3586361_2 ABC transporter K06158 - - 8.208e-232 733.0
MMD3_k127_3586361_20 PFAM glycoside hydrolase, family 13 domain protein - - - 0.000000000000000002551 89.0
MMD3_k127_3586361_21 WD40-like Beta Propeller Repeat K03641,K08676 - - 0.00000000000000009175 94.0
MMD3_k127_3586361_22 Pterin binding enzyme K00548 - 2.1.1.13 0.000000000000001552 86.0
MMD3_k127_3586361_23 Conserved hypothetical protein 698 - - - 0.00000008617 57.0
MMD3_k127_3586361_24 - - - - 0.0000003216 61.0
MMD3_k127_3586361_25 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.000004746 60.0
MMD3_k127_3586361_26 PFAM FecR protein - - - 0.0005063 50.0
MMD3_k127_3586361_3 PFAM aminotransferase, class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 598.0
MMD3_k127_3586361_4 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 364.0
MMD3_k127_3586361_5 PFAM CoA-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009734 354.0
MMD3_k127_3586361_6 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 338.0
MMD3_k127_3586361_7 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 317.0
MMD3_k127_3586361_8 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 290.0
MMD3_k127_3586361_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004456 271.0
MMD3_k127_3600506_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000001006 130.0
MMD3_k127_3600506_1 RNA-binding protein homologous to eukaryotic snRNP - - - 0.000000001412 68.0
MMD3_k127_3630253_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 1.897e-234 742.0
MMD3_k127_3630253_1 Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 535.0
MMD3_k127_3630253_10 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000007689 205.0
MMD3_k127_3630253_11 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000006863 197.0
MMD3_k127_3630253_12 chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000000000000000000000000006811 175.0
MMD3_k127_3630253_13 cellulase activity - - - 0.0000000000000000000000000000000000000000000005208 192.0
MMD3_k127_3630253_14 Predicted membrane protein (DUF2318) - - - 0.000000000000000000000000000001031 129.0
MMD3_k127_3630253_15 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.000000000000002111 76.0
MMD3_k127_3630253_16 Putative diguanylate phosphodiesterase - - - 0.00000000000001134 74.0
MMD3_k127_3630253_17 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000002686 87.0
MMD3_k127_3630253_18 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000006984 68.0
MMD3_k127_3630253_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 520.0
MMD3_k127_3630253_20 Belongs to the peptidase S8 family - - - 0.0000006961 61.0
MMD3_k127_3630253_21 hydrolase family 81 - - - 0.000001057 62.0
MMD3_k127_3630253_22 amine dehydrogenase activity - - - 0.000002289 59.0
MMD3_k127_3630253_23 SurA N-terminal domain K03771 - 5.2.1.8 0.000006854 57.0
MMD3_k127_3630253_24 polygalacturonase activity K20276 - - 0.0002041 54.0
MMD3_k127_3630253_3 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 448.0
MMD3_k127_3630253_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 360.0
MMD3_k127_3630253_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 355.0
MMD3_k127_3630253_6 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 334.0
MMD3_k127_3630253_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001894 274.0
MMD3_k127_3630253_8 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002317 259.0
MMD3_k127_3630253_9 Mitochondrial small ribosomal subunit Rsm22 - - - 0.000000000000000000000000000000000000000000000000000000000001084 224.0
MMD3_k127_3636895_0 Hydrophobe amphiphile Efflux-1 (HAE1) family K03296,K18138 - - 0.0 1467.0
MMD3_k127_3636895_1 HlyD membrane-fusion protein of T1SS K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 557.0
MMD3_k127_3636895_2 Dihydroorotate dehydrogenase K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004899 263.0
MMD3_k127_3636895_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000006702 231.0
MMD3_k127_3636895_4 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000008584 230.0
MMD3_k127_3636895_6 Oxidoreductase NAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000001052 180.0
MMD3_k127_3636895_7 cyclic nucleotide binding K10914 - - 0.0000000000000000000000000000000005525 133.0
MMD3_k127_3636895_8 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000006329 117.0
MMD3_k127_3869634_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 9.878e-274 852.0
MMD3_k127_3869634_1 FAD binding domain K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 580.0
MMD3_k127_3869634_2 Transposase, IS605 OrfB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 373.0
MMD3_k127_3869634_3 Resolvase, N terminal domain K07450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001651 255.0
MMD3_k127_3869634_4 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000000000004049 149.0
MMD3_k127_3869634_5 PFAM Glutaredoxin K06191 - - 0.00000000000000000000003578 101.0
MMD3_k127_3869634_6 transcription factor binding - - - 0.0000000000000001495 81.0
MMD3_k127_3869634_7 Transposase, IS605 OrfB family - - - 0.00005518 49.0
MMD3_k127_3872154_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.578e-238 751.0
MMD3_k127_3872154_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 479.0
MMD3_k127_3872154_10 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000769 162.0
MMD3_k127_3872154_11 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000004586 155.0
MMD3_k127_3872154_12 acyl-CoA dehydrogenase activity K06446 - - 0.0000000000000000000000000000000002739 155.0
MMD3_k127_3872154_13 Methyltransferase domain - - - 0.00000000000000000000001011 109.0
MMD3_k127_3872154_14 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.0000000000000000000001421 101.0
MMD3_k127_3872154_15 MMPL family K07003 - - 0.0000000000000000005972 88.0
MMD3_k127_3872154_16 - - - - 0.0000000000000001776 89.0
MMD3_k127_3872154_17 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000007371 91.0
MMD3_k127_3872154_18 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000003949 78.0
MMD3_k127_3872154_19 - - - - 0.000000000001247 70.0
MMD3_k127_3872154_2 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 481.0
MMD3_k127_3872154_20 Rhodanese-like domain - - - 0.0000000000036 72.0
MMD3_k127_3872154_21 PFAM DsrE family protein K07235 - - 0.0000000006684 64.0
MMD3_k127_3872154_22 Sulfur reduction protein DsrE - - - 0.000000001215 65.0
MMD3_k127_3872154_23 signal transduction protein with EFhand domain - - - 0.000001371 51.0
MMD3_k127_3872154_24 sulfur relay protein TusB DsrH K07237 - - 0.0001259 48.0
MMD3_k127_3872154_25 PFAM DsrE K07235 - - 0.0003006 46.0
MMD3_k127_3872154_3 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 452.0
MMD3_k127_3872154_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 340.0
MMD3_k127_3872154_5 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 322.0
MMD3_k127_3872154_6 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000002405 226.0
MMD3_k127_3872154_7 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000006737 199.0
MMD3_k127_3872154_8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000003469 185.0
MMD3_k127_3872154_9 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000001324 160.0
MMD3_k127_3889070_0 NADH-quinone oxidoreductase subunit F K18005 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 424.0
MMD3_k127_3889070_1 NADH ubiquinone oxidoreductase K18006,K18007 - 1.12.1.2 0.000000000000000000000000000000000000000001352 158.0
MMD3_k127_3919987_0 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 507.0
MMD3_k127_3919987_1 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 386.0
MMD3_k127_3919987_2 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 357.0
MMD3_k127_3919987_3 - K09771 - - 0.0000000000000000000000000000000000000000000834 162.0
MMD3_k127_3919987_4 Glycosyltransferase family 87 - - - 0.000000000004207 72.0
MMD3_k127_3938119_0 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 485.0
MMD3_k127_3938119_1 pseudouridine synthase activity K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 337.0
MMD3_k127_3938119_2 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000009484 186.0
MMD3_k127_3938119_3 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000001198 181.0
MMD3_k127_3938119_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000584 119.0
MMD3_k127_3938119_5 DNA-binding protein VF530 - - - 0.00000000000000000000000000133 113.0
MMD3_k127_3938119_7 - - - - 0.000000000008261 77.0
MMD3_k127_3939634_0 DEAD DEAH box K03724 - - 0.0 1602.0
MMD3_k127_3939634_1 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1243.0
MMD3_k127_3939634_10 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 607.0
MMD3_k127_3939634_100 sulfur relay protein TusB DsrH K07237 - - 0.0001686 48.0
MMD3_k127_3939634_101 Domain of unknown function (DUF4124) - - - 0.0001769 53.0
MMD3_k127_3939634_103 DsrE/DsrF-like family - - - 0.0005378 48.0
MMD3_k127_3939634_11 PFAM nitrite and sulphite reductase 4Fe-4S K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 556.0
MMD3_k127_3939634_12 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 561.0
MMD3_k127_3939634_13 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 531.0
MMD3_k127_3939634_14 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 522.0
MMD3_k127_3939634_15 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 522.0
MMD3_k127_3939634_16 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 507.0
MMD3_k127_3939634_17 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008617 496.0
MMD3_k127_3939634_18 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 494.0
MMD3_k127_3939634_19 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 491.0
MMD3_k127_3939634_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1202.0
MMD3_k127_3939634_20 NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 459.0
MMD3_k127_3939634_21 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 438.0
MMD3_k127_3939634_22 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 438.0
MMD3_k127_3939634_23 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 421.0
MMD3_k127_3939634_24 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 417.0
MMD3_k127_3939634_25 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 399.0
MMD3_k127_3939634_26 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 400.0
MMD3_k127_3939634_27 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 388.0
MMD3_k127_3939634_28 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 389.0
MMD3_k127_3939634_29 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 362.0
MMD3_k127_3939634_3 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.038e-299 931.0
MMD3_k127_3939634_30 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 347.0
MMD3_k127_3939634_31 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 347.0
MMD3_k127_3939634_32 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 342.0
MMD3_k127_3939634_33 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 336.0
MMD3_k127_3939634_34 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 336.0
MMD3_k127_3939634_35 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 333.0
MMD3_k127_3939634_36 TIGRFAM Tat (twin-arginine translocation) pathway signal sequence K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 322.0
MMD3_k127_3939634_37 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 323.0
MMD3_k127_3939634_38 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 301.0
MMD3_k127_3939634_39 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 291.0
MMD3_k127_3939634_4 4Fe-4S dicluster domain - - - 2.922e-293 906.0
MMD3_k127_3939634_40 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 291.0
MMD3_k127_3939634_41 FMN binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003217 277.0
MMD3_k127_3939634_42 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001147 267.0
MMD3_k127_3939634_43 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001316 265.0
MMD3_k127_3939634_44 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001882 275.0
MMD3_k127_3939634_45 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000006188 242.0
MMD3_k127_3939634_46 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000001056 243.0
MMD3_k127_3939634_47 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000001182 241.0
MMD3_k127_3939634_48 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000104 248.0
MMD3_k127_3939634_49 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000009365 248.0
MMD3_k127_3939634_5 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 3.399e-272 865.0
MMD3_k127_3939634_50 PFAM flavin reductase domain protein FMN-binding - - - 0.000000000000000000000000000000000000000000000000000000000000012 221.0
MMD3_k127_3939634_51 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000002984 223.0
MMD3_k127_3939634_52 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000001332 207.0
MMD3_k127_3939634_53 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000000000003563 199.0
MMD3_k127_3939634_54 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000004088 199.0
MMD3_k127_3939634_55 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000006264 193.0
MMD3_k127_3939634_56 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000009574 193.0
MMD3_k127_3939634_57 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000008542 175.0
MMD3_k127_3939634_58 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000001442 171.0
MMD3_k127_3939634_59 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.000000000000000000000000000000000000000000004188 169.0
MMD3_k127_3939634_6 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.329e-258 811.0
MMD3_k127_3939634_60 - - - - 0.00000000000000000000000000000000000000000000929 168.0
MMD3_k127_3939634_61 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000000001385 167.0
MMD3_k127_3939634_62 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000004667 161.0
MMD3_k127_3939634_63 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000000000000000000001125 155.0
MMD3_k127_3939634_64 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000000000000005323 158.0
MMD3_k127_3939634_65 Protein of unknown function (DUF2845) - - - 0.00000000000000000000000000000000000000007931 158.0
MMD3_k127_3939634_66 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000005271 151.0
MMD3_k127_3939634_67 diguanylate cyclase - - - 0.00000000000000000000000000000000001066 150.0
MMD3_k127_3939634_69 Fe-S cluster domain protein - - - 0.00000000000000000000000000000001067 138.0
MMD3_k127_3939634_7 PFAM Radical SAM - - - 4.646e-215 677.0
MMD3_k127_3939634_70 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.00000000000000000000000000001092 121.0
MMD3_k127_3939634_71 - - - - 0.0000000000000000000000000001447 119.0
MMD3_k127_3939634_72 - - - - 0.0000000000000000000000000002286 119.0
MMD3_k127_3939634_73 - - - - 0.0000000000000000000000000008651 123.0
MMD3_k127_3939634_74 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000143 122.0
MMD3_k127_3939634_75 protein, YhcH YjgK YiaL family - - - 0.000000000000000000000000007606 115.0
MMD3_k127_3939634_76 PFAM S23 ribosomal protein - - - 0.000000000000000000000000009198 112.0
MMD3_k127_3939634_77 cyclic nucleotide binding K00384,K01420 - 1.8.1.9 0.00000000000000000000000006106 112.0
MMD3_k127_3939634_78 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000004493 104.0
MMD3_k127_3939634_79 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000005928 105.0
MMD3_k127_3939634_8 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 3.912e-204 644.0
MMD3_k127_3939634_80 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.00000000000000000000001288 106.0
MMD3_k127_3939634_81 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000001749 106.0
MMD3_k127_3939634_82 - - - - 0.000000000000000000000145 101.0
MMD3_k127_3939634_83 - - - - 0.00000000000000000002101 93.0
MMD3_k127_3939634_84 PFAM 4Fe-4S ferredoxin - - - 0.0000000000000000002654 89.0
MMD3_k127_3939634_85 PBS lyase HEAT-like repeat - - - 0.0000000000000000007603 102.0
MMD3_k127_3939634_86 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.000000000000000001559 88.0
MMD3_k127_3939634_87 Cytochrome c7 and related cytochrome c - - - 0.000000000000000006918 89.0
MMD3_k127_3939634_88 formate dehydrogenase K00127 - - 0.00000000000000002769 96.0
MMD3_k127_3939634_89 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000721 82.0
MMD3_k127_3939634_9 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 8.12e-200 631.0
MMD3_k127_3939634_90 Tetratricopeptide repeat - - - 0.000000000000002531 84.0
MMD3_k127_3939634_92 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000003384 70.0
MMD3_k127_3939634_93 - - - - 0.00000000001573 67.0
MMD3_k127_3939634_94 Protein of unknown function (DUF402) - - - 0.00000001143 63.0
MMD3_k127_3939634_95 - - - - 0.000000101 59.0
MMD3_k127_3939634_96 lyase activity - - - 0.0000004147 56.0
MMD3_k127_3939634_97 domain protein - - - 0.0000004386 55.0
MMD3_k127_3939634_99 - - - - 0.00003692 49.0
MMD3_k127_3946939_0 Sugar (and other) transporter K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 613.0
MMD3_k127_3946939_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 419.0
MMD3_k127_3946939_2 HlyD membrane-fusion protein of T1SS K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 332.0
MMD3_k127_3949330_0 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000004655 188.0
MMD3_k127_3949330_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000731 153.0
MMD3_k127_3949330_2 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00001206 47.0
MMD3_k127_3950874_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 537.0
MMD3_k127_3950874_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 516.0
MMD3_k127_3950874_10 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000025 266.0
MMD3_k127_3950874_11 Pfam Anion-transporting ATPase K01551,K19171 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000009859 260.0
MMD3_k127_3950874_12 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000003018 209.0
MMD3_k127_3950874_13 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000000000002818 202.0
MMD3_k127_3950874_14 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000001391 199.0
MMD3_k127_3950874_15 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000001728 190.0
MMD3_k127_3950874_16 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000002685 176.0
MMD3_k127_3950874_17 Could be involved in septation K06412 - - 0.00000000000000000000000000000001616 128.0
MMD3_k127_3950874_18 GGDEF domain - - - 0.000000000000000000000217 113.0
MMD3_k127_3950874_19 Regulatory protein, FmdB family - - - 0.000000000000000000232 91.0
MMD3_k127_3950874_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 477.0
MMD3_k127_3950874_20 CbiX K03794 - 4.99.1.4 0.00000000000000004562 88.0
MMD3_k127_3950874_21 diguanylate cyclase - - - 0.00000000003518 73.0
MMD3_k127_3950874_22 - - - - 0.00000000005917 63.0
MMD3_k127_3950874_23 Uncharacterized ACR, COG1430 K09005 - - 0.000001399 61.0
MMD3_k127_3950874_24 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0006451 50.0
MMD3_k127_3950874_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000947 482.0
MMD3_k127_3950874_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 410.0
MMD3_k127_3950874_5 Probable transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 400.0
MMD3_k127_3950874_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 349.0
MMD3_k127_3950874_7 Arsenical pump membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 323.0
MMD3_k127_3950874_8 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 295.0
MMD3_k127_3950874_9 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000002373 272.0
MMD3_k127_3981825_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.509e-214 685.0
MMD3_k127_3981825_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 6.601e-199 632.0
MMD3_k127_3981825_10 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000001218 172.0
MMD3_k127_3981825_11 FecR protein - - - 0.00000000000000000000000000000000000000000001759 171.0
MMD3_k127_3981825_12 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000834 138.0
MMD3_k127_3981825_13 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000669 133.0
MMD3_k127_3981825_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000949 122.0
MMD3_k127_3981825_15 PFAM iron dependent repressor K03709 - - 0.0000000000000000000000000000136 124.0
MMD3_k127_3981825_16 Transglutaminase-like superfamily - - - 0.0000000000000000000009395 109.0
MMD3_k127_3981825_17 Phosphoribosyl transferase domain - - - 0.00000000000003847 73.0
MMD3_k127_3981825_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 532.0
MMD3_k127_3981825_3 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 371.0
MMD3_k127_3981825_4 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 352.0
MMD3_k127_3981825_5 S-layer homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 346.0
MMD3_k127_3981825_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 343.0
MMD3_k127_3981825_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001647 252.0
MMD3_k127_3981825_8 - - - - 0.0000000000000000000000000000000000000000000000000000000001687 217.0
MMD3_k127_3981825_9 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000004615 207.0
MMD3_k127_3996824_0 Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 289.0
MMD3_k127_3996824_1 PFAM Smr protein MutS2 - - - 0.000000000000000000000000000003225 123.0
MMD3_k127_3996824_2 carboxylic ester hydrolase activity - - - 0.000000006705 57.0
MMD3_k127_4017598_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 359.0
MMD3_k127_4055008_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.324e-211 665.0
MMD3_k127_4055008_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 4.51e-211 665.0
MMD3_k127_4055008_10 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 481.0
MMD3_k127_4055008_11 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 474.0
MMD3_k127_4055008_12 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 431.0
MMD3_k127_4055008_13 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 423.0
MMD3_k127_4055008_14 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 406.0
MMD3_k127_4055008_15 Belongs to the heme-copper respiratory oxidase family K04561 - 1.7.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 406.0
MMD3_k127_4055008_16 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 389.0
MMD3_k127_4055008_17 PFAM Class II aldolase K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 387.0
MMD3_k127_4055008_18 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 389.0
MMD3_k127_4055008_19 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 354.0
MMD3_k127_4055008_2 Seven times multi-haem cytochrome CxxCH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 610.0
MMD3_k127_4055008_20 Family 5 K02035,K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 364.0
MMD3_k127_4055008_21 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 342.0
MMD3_k127_4055008_22 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 326.0
MMD3_k127_4055008_23 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 313.0
MMD3_k127_4055008_24 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 310.0
MMD3_k127_4055008_25 COG0210 Superfamily I DNA and RNA helicases K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 326.0
MMD3_k127_4055008_26 Protein of unknown function (DUF401) K09133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 304.0
MMD3_k127_4055008_27 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 287.0
MMD3_k127_4055008_28 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002949 288.0
MMD3_k127_4055008_29 PFAM PP-loop domain protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000977 280.0
MMD3_k127_4055008_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147,K22465 - 4.1.99.17,4.1.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 562.0
MMD3_k127_4055008_30 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004091 270.0
MMD3_k127_4055008_31 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001171 264.0
MMD3_k127_4055008_32 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000005813 257.0
MMD3_k127_4055008_33 regulatory protein IclR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005817 258.0
MMD3_k127_4055008_34 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000272 245.0
MMD3_k127_4055008_35 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004677 243.0
MMD3_k127_4055008_36 PFAM HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000002961 237.0
MMD3_k127_4055008_37 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000003093 237.0
MMD3_k127_4055008_38 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000004542 220.0
MMD3_k127_4055008_39 TIGRFAM phosphomethylpyrimidine kinase K00868,K00941,K14153 - 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000008016 219.0
MMD3_k127_4055008_4 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 557.0
MMD3_k127_4055008_40 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000000000000001309 216.0
MMD3_k127_4055008_41 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000001546 210.0
MMD3_k127_4055008_42 metal ion binding - - - 0.0000000000000000000000000000000000000000000000000000002147 204.0
MMD3_k127_4055008_43 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000003344 200.0
MMD3_k127_4055008_44 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000004646 200.0
MMD3_k127_4055008_45 ribonuclease - GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000001498 192.0
MMD3_k127_4055008_46 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000005842 193.0
MMD3_k127_4055008_47 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000002152 186.0
MMD3_k127_4055008_48 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000001959 185.0
MMD3_k127_4055008_49 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000004896 175.0
MMD3_k127_4055008_5 'glutamate synthase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 555.0
MMD3_k127_4055008_50 Thioredoxin-like domain K03671 - - 0.0000000000000000000000000000000000000000000005755 168.0
MMD3_k127_4055008_51 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000000000007053 177.0
MMD3_k127_4055008_53 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000001578 163.0
MMD3_k127_4055008_54 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000001723 163.0
MMD3_k127_4055008_55 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000006258 182.0
MMD3_k127_4055008_56 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000000000005125 154.0
MMD3_k127_4055008_57 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000004419 157.0
MMD3_k127_4055008_58 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000002699 151.0
MMD3_k127_4055008_59 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000007464 151.0
MMD3_k127_4055008_6 SMART Nucleotide binding protein, PINc K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 551.0
MMD3_k127_4055008_60 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000000000002963 140.0
MMD3_k127_4055008_61 cell redox homeostasis K02199 - - 0.000000000000000000000000000000000003925 142.0
MMD3_k127_4055008_62 4Fe-4S binding domain - - - 0.0000000000000000000000000000000002519 144.0
MMD3_k127_4055008_63 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000000000006627 134.0
MMD3_k127_4055008_64 PFAM CBS domain - - - 0.0000000000000000000000000002004 122.0
MMD3_k127_4055008_65 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000007658 112.0
MMD3_k127_4055008_66 NifU-like domain - - - 0.00000000000000000000000001417 109.0
MMD3_k127_4055008_67 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000006241 112.0
MMD3_k127_4055008_68 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000000001152 112.0
MMD3_k127_4055008_69 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000002835 100.0
MMD3_k127_4055008_7 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 511.0
MMD3_k127_4055008_70 Barstar (barnase inhibitor) K03623 - - 0.000000000000000005189 87.0
MMD3_k127_4055008_71 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.3.1.108 0.0000000000001219 72.0
MMD3_k127_4055008_73 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.00000000005195 67.0
MMD3_k127_4055008_74 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000001114 63.0
MMD3_k127_4055008_75 nuclear chromosome segregation - - - 0.000000001551 70.0
MMD3_k127_4055008_76 - - - - 0.00000003256 57.0
MMD3_k127_4055008_77 small metal-binding protein - - - 0.000001425 55.0
MMD3_k127_4055008_79 Transposase - - - 0.00008235 46.0
MMD3_k127_4055008_8 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 487.0
MMD3_k127_4055008_80 hydrolase K01048 - 3.1.1.5 0.0001651 44.0
MMD3_k127_4055008_81 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K01760 - 4.4.1.8 0.0003718 44.0
MMD3_k127_4055008_9 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 480.0
MMD3_k127_405521_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 362.0
MMD3_k127_406434_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1150.0
MMD3_k127_406434_1 DNA polymerase A domain K02335 - 2.7.7.7 6.112e-313 983.0
MMD3_k127_406434_10 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 550.0
MMD3_k127_406434_11 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 567.0
MMD3_k127_406434_12 phosphorelay signal transduction system K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 523.0
MMD3_k127_406434_13 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 488.0
MMD3_k127_406434_14 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 449.0
MMD3_k127_406434_15 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 436.0
MMD3_k127_406434_16 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 435.0
MMD3_k127_406434_17 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 397.0
MMD3_k127_406434_18 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 384.0
MMD3_k127_406434_19 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 384.0
MMD3_k127_406434_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.143e-292 912.0
MMD3_k127_406434_20 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 379.0
MMD3_k127_406434_21 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 378.0
MMD3_k127_406434_22 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 377.0
MMD3_k127_406434_23 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 346.0
MMD3_k127_406434_24 CBS domain containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 344.0
MMD3_k127_406434_25 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 324.0
MMD3_k127_406434_26 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 316.0
MMD3_k127_406434_27 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 310.0
MMD3_k127_406434_28 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 300.0
MMD3_k127_406434_29 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 295.0
MMD3_k127_406434_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.09e-243 778.0
MMD3_k127_406434_30 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 291.0
MMD3_k127_406434_31 PFAM cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007469 278.0
MMD3_k127_406434_32 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000113 274.0
MMD3_k127_406434_33 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003313 268.0
MMD3_k127_406434_34 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000009409 241.0
MMD3_k127_406434_35 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000001002 196.0
MMD3_k127_406434_36 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000000000000005283 190.0
MMD3_k127_406434_37 Pfam:DUF490 K09800 - - 0.0000000000000000000000000000000000000000000000000002192 213.0
MMD3_k127_406434_38 Domain of unknown function (DUF374) K02527,K09778 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000199 160.0
MMD3_k127_406434_39 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000006868 146.0
MMD3_k127_406434_4 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 3.19e-204 647.0
MMD3_k127_406434_40 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000000007241 143.0
MMD3_k127_406434_41 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000009568 130.0
MMD3_k127_406434_42 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000005176 123.0
MMD3_k127_406434_43 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000006286 111.0
MMD3_k127_406434_44 ribosomal protein L7Ae L30e S12e Gadd45 K07742 - - 0.000000000000000000003798 100.0
MMD3_k127_406434_45 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000009273 92.0
MMD3_k127_406434_46 Belongs to the HesB IscA family K15724 - - 0.000000000000000001358 90.0
MMD3_k127_406434_47 - - - - 0.0000000000001072 77.0
MMD3_k127_406434_48 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06142 - - 0.000000000000679 76.0
MMD3_k127_406434_49 FAD dependent oxidoreductase K09835 - 5.2.1.13 0.00000004236 65.0
MMD3_k127_406434_5 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 6.997e-199 631.0
MMD3_k127_406434_50 MazG family K02428,K02499 - 3.6.1.66 0.000003476 48.0
MMD3_k127_406434_6 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 2.618e-195 621.0
MMD3_k127_406434_7 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 603.0
MMD3_k127_406434_8 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 591.0
MMD3_k127_406434_9 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 604.0
MMD3_k127_4069094_0 Domains REC, sigma54 interaction, HTH8 K02481 - - 7.878e-194 614.0
MMD3_k127_4069094_1 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009587 619.0
MMD3_k127_4069094_10 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000003716 149.0
MMD3_k127_4069094_11 Protein of unknown function DUF134 - - - 0.00000000000000000000000005076 109.0
MMD3_k127_4069094_12 Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system K02049,K15555 - - 0.000000000000009035 78.0
MMD3_k127_4069094_13 DsrE/DsrF-like family - - - 0.0000000003047 66.0
MMD3_k127_4069094_14 PFAM Bacterial regulatory protein, arsR family - - - 0.000000002929 60.0
MMD3_k127_4069094_15 - - - - 0.0001894 49.0
MMD3_k127_4069094_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 605.0
MMD3_k127_4069094_3 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 509.0
MMD3_k127_4069094_4 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 497.0
MMD3_k127_4069094_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 502.0
MMD3_k127_4069094_6 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003715 282.0
MMD3_k127_4069094_7 His Kinase A (phosphoacceptor) domain K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002897 271.0
MMD3_k127_4069094_8 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000002128 173.0
MMD3_k127_4069094_9 Bacterial regulatory proteins, crp family - - - 0.00000000000000000000000000000000000000002284 161.0
MMD3_k127_4071220_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.584e-280 877.0
MMD3_k127_4071220_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.164e-255 797.0
MMD3_k127_4071220_10 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 339.0
MMD3_k127_4071220_11 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 318.0
MMD3_k127_4071220_12 Cytidylyltransferase K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 302.0
MMD3_k127_4071220_13 N-terminal domain of galactosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 303.0
MMD3_k127_4071220_14 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000001975 268.0
MMD3_k127_4071220_15 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000001523 206.0
MMD3_k127_4071220_16 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.000000000000000000000000000000000000000000000000005368 186.0
MMD3_k127_4071220_17 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000005448 174.0
MMD3_k127_4071220_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000005665 169.0
MMD3_k127_4071220_19 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000001654 151.0
MMD3_k127_4071220_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 578.0
MMD3_k127_4071220_20 Domain of unknown function (DUF4468) with TBP-like fold - - - 0.0000000000000000000009899 103.0
MMD3_k127_4071220_21 electron transfer activity K05337,K17247 - - 0.000000000000000000003245 94.0
MMD3_k127_4071220_23 Winged helix-turn helix - - - 0.0002229 48.0
MMD3_k127_4071220_3 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 512.0
MMD3_k127_4071220_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 491.0
MMD3_k127_4071220_5 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 447.0
MMD3_k127_4071220_6 SIS domain K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 398.0
MMD3_k127_4071220_7 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 383.0
MMD3_k127_4071220_8 Glycosyltransferase family 9 (heptosyltransferase) K02843,K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 364.0
MMD3_k127_4071220_9 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 344.0
MMD3_k127_4092344_0 collagen metabolic process K08677 - - 8.937e-202 644.0
MMD3_k127_4092344_1 glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 580.0
MMD3_k127_4092344_10 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 322.0
MMD3_k127_4092344_11 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 304.0
MMD3_k127_4092344_12 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000388 310.0
MMD3_k127_4092344_13 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007577 278.0
MMD3_k127_4092344_14 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 268.0
MMD3_k127_4092344_15 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000001083 233.0
MMD3_k127_4092344_16 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000002273 207.0
MMD3_k127_4092344_17 Protein of unknown function (DUF1810) - - - 0.000000000000000000000000000000000000000000000000000000007047 202.0
MMD3_k127_4092344_18 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.000000000000000000000000000000000000000000000000000001415 199.0
MMD3_k127_4092344_19 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000002543 207.0
MMD3_k127_4092344_2 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 559.0
MMD3_k127_4092344_20 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000000000000002513 178.0
MMD3_k127_4092344_21 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000041 196.0
MMD3_k127_4092344_22 Outer membrane phospholipase A K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000007197 190.0
MMD3_k127_4092344_23 phosphatase activity K05967 - - 0.00000000000000000000000000000000000000000000003456 176.0
MMD3_k127_4092344_25 phosphorelay sensor kinase activity K03406,K07675,K13598 - 2.7.13.3 0.00000000000000000000000000000000000001065 164.0
MMD3_k127_4092344_26 - - - - 0.00000000000000000000000000000000000002546 149.0
MMD3_k127_4092344_27 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000002296 144.0
MMD3_k127_4092344_28 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000000004459 143.0
MMD3_k127_4092344_29 SnoaL-like domain - - - 0.00000000000000000000000000000000191 135.0
MMD3_k127_4092344_3 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 522.0
MMD3_k127_4092344_30 PFAM Antibiotic biosynthesis monooxygenase K09932 - - 0.00000000000000000000000000000324 128.0
MMD3_k127_4092344_31 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000000000000000000000212 119.0
MMD3_k127_4092344_32 Pfam:Pyridox_oxidase - - - 0.000000000000000000000002114 106.0
MMD3_k127_4092344_33 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000001592 101.0
MMD3_k127_4092344_34 Protein of unknown function (DUF3617) - - - 0.0000000000000000000006604 109.0
MMD3_k127_4092344_35 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000000001119 97.0
MMD3_k127_4092344_36 ester cyclase - - - 0.0000000000000000000243 98.0
MMD3_k127_4092344_37 regulator, PATAN and FRGAF domain-containing - - - 0.00000000000000000003018 105.0
MMD3_k127_4092344_38 Protein of unknown function (DUF3617) - - - 0.000000000000000001959 91.0
MMD3_k127_4092344_39 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000007429 87.0
MMD3_k127_4092344_4 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009259 511.0
MMD3_k127_4092344_40 - - - - 0.00000000000000001561 87.0
MMD3_k127_4092344_42 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000000004492 69.0
MMD3_k127_4092344_43 Bacterial dnaA protein helix-turn-helix K07491 - - 0.000002014 51.0
MMD3_k127_4092344_44 Chlorite dismutase - - - 0.00002609 49.0
MMD3_k127_4092344_45 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00006426 53.0
MMD3_k127_4092344_46 Transposase IS200 like K07491 - - 0.0001219 48.0
MMD3_k127_4092344_49 SH3 domain protein - - - 0.0006053 52.0
MMD3_k127_4092344_5 glucose sorbosone K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 440.0
MMD3_k127_4092344_6 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 434.0
MMD3_k127_4092344_7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 357.0
MMD3_k127_4092344_8 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 343.0
MMD3_k127_4092344_9 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 338.0
MMD3_k127_4139003_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 426.0
MMD3_k127_4139003_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 350.0
MMD3_k127_4139003_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.00000000000000000000000000000000000000000000000000000002338 201.0
MMD3_k127_4139003_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000002975 200.0
MMD3_k127_4139003_4 metallopeptidase activity K03630 - - 0.0000000000000000000000000000000000003098 145.0
MMD3_k127_4139003_5 Amidohydrolase family - - - 0.00000000000000000000000000000000008496 143.0
MMD3_k127_4139003_6 - - - - 0.00000000001248 69.0
MMD3_k127_4139003_7 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.000000001411 58.0
MMD3_k127_4139003_8 cellulase activity K12287 - - 0.000959 47.0
MMD3_k127_414767_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 4.164e-274 849.0
MMD3_k127_414767_1 Telomere recombination K04656 - - 1.125e-249 795.0
MMD3_k127_414767_10 TIGRFAM hydrogenase (NiFe) small subunit HydA K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 319.0
MMD3_k127_414767_11 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001197 267.0
MMD3_k127_414767_12 Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000001676 230.0
MMD3_k127_414767_13 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000004313 227.0
MMD3_k127_414767_14 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001999 240.0
MMD3_k127_414767_15 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000004188 218.0
MMD3_k127_414767_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000001194 223.0
MMD3_k127_414767_17 hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000002089 160.0
MMD3_k127_414767_18 Yip1 domain - - - 0.000000000000000000000000000000000001214 148.0
MMD3_k127_414767_19 Pfam Response regulator receiver - - - 0.00000000000000000000000000000002249 129.0
MMD3_k127_414767_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 599.0
MMD3_k127_414767_20 Prokaryotic cytochrome b561 K03620 - - 0.00000000000000000000000000000003014 134.0
MMD3_k127_414767_21 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000006324 123.0
MMD3_k127_414767_22 Cytochrome C oxidase, cbb3-type, subunit III K08906 - - 0.00000000000000000000000000006685 119.0
MMD3_k127_414767_23 nickel cation binding K04651,K19640 - - 0.00000000000000000000000009973 113.0
MMD3_k127_414767_24 PFAM EamA-like transporter family - - - 0.00000000000000000005397 100.0
MMD3_k127_414767_25 cytochrome C oxidoreductase subunit B - - - 0.00000000000000001897 86.0
MMD3_k127_414767_26 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000001089 74.0
MMD3_k127_414767_27 carbon dioxide binding K04653 - - 0.00000000000004164 79.0
MMD3_k127_414767_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K00533,K05922,K06281 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.5.1,1.12.7.2,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 577.0
MMD3_k127_414767_4 Peptidase U62 modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 545.0
MMD3_k127_414767_5 phosphorelay signal transduction system K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 463.0
MMD3_k127_414767_6 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 456.0
MMD3_k127_414767_7 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 420.0
MMD3_k127_414767_8 drug transmembrane transporter activity K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 413.0
MMD3_k127_414767_9 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 364.0
MMD3_k127_4175027_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 342.0
MMD3_k127_4183406_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000002134 185.0
MMD3_k127_4183406_1 Ribonuclease E/G family K08301 - - 0.000000000000000000005015 93.0
MMD3_k127_4190510_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.309e-317 990.0
MMD3_k127_4190510_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 5.245e-303 952.0
MMD3_k127_4190510_10 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 486.0
MMD3_k127_4190510_100 protein transport across the cell outer membrane K08084 - - 0.0000007465 57.0
MMD3_k127_4190510_101 PilX N-terminal - - - 0.000001425 57.0
MMD3_k127_4190510_102 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0004026 45.0
MMD3_k127_4190510_11 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 458.0
MMD3_k127_4190510_12 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 456.0
MMD3_k127_4190510_13 Nucleotidyl transferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 439.0
MMD3_k127_4190510_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 443.0
MMD3_k127_4190510_15 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 419.0
MMD3_k127_4190510_16 Neisseria PilC beta-propeller domain K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 453.0
MMD3_k127_4190510_17 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 422.0
MMD3_k127_4190510_18 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 387.0
MMD3_k127_4190510_19 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 390.0
MMD3_k127_4190510_2 Cytochrome c554 and c-prime - - - 2.56e-230 722.0
MMD3_k127_4190510_20 Putative zinc binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 374.0
MMD3_k127_4190510_21 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 373.0
MMD3_k127_4190510_22 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 349.0
MMD3_k127_4190510_23 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 348.0
MMD3_k127_4190510_24 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 333.0
MMD3_k127_4190510_25 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 323.0
MMD3_k127_4190510_26 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 327.0
MMD3_k127_4190510_27 PFAM ABC transporter related K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 318.0
MMD3_k127_4190510_28 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 313.0
MMD3_k127_4190510_29 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 306.0
MMD3_k127_4190510_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.363e-195 616.0
MMD3_k127_4190510_30 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 294.0
MMD3_k127_4190510_31 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 297.0
MMD3_k127_4190510_32 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 299.0
MMD3_k127_4190510_33 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 290.0
MMD3_k127_4190510_34 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000105 287.0
MMD3_k127_4190510_35 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004027 295.0
MMD3_k127_4190510_36 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002517 286.0
MMD3_k127_4190510_37 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004918 275.0
MMD3_k127_4190510_38 thiamine-phosphate kinase activity K00946,K07123 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000146 278.0
MMD3_k127_4190510_39 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000089 273.0
MMD3_k127_4190510_4 PEP-utilising enzyme, N-terminal K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 587.0
MMD3_k127_4190510_40 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005726 266.0
MMD3_k127_4190510_41 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000007387 267.0
MMD3_k127_4190510_42 glycosyl transferase family 2 K00721,K00786 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000006066 259.0
MMD3_k127_4190510_43 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 254.0
MMD3_k127_4190510_44 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005974 256.0
MMD3_k127_4190510_45 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001562 254.0
MMD3_k127_4190510_46 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004818 252.0
MMD3_k127_4190510_47 Glycosyltransferase, group 2 family protein K12990 - - 0.000000000000000000000000000000000000000000000000000000000000000006223 237.0
MMD3_k127_4190510_48 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000001315 233.0
MMD3_k127_4190510_49 PFAM Stage II sporulation K06381 - - 0.0000000000000000000000000000000000000000000000000000000000000001014 230.0
MMD3_k127_4190510_5 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 552.0
MMD3_k127_4190510_50 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000005124 225.0
MMD3_k127_4190510_51 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000001786 219.0
MMD3_k127_4190510_52 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000005037 212.0
MMD3_k127_4190510_53 RmlD substrate binding domain K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000001016 215.0
MMD3_k127_4190510_54 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000000000002338 201.0
MMD3_k127_4190510_55 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000001514 205.0
MMD3_k127_4190510_56 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000001131 198.0
MMD3_k127_4190510_57 self proteolysis - - - 0.0000000000000000000000000000000000000000000000000001254 198.0
MMD3_k127_4190510_58 - - - - 0.00000000000000000000000000000000000000000009813 171.0
MMD3_k127_4190510_59 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000003023 163.0
MMD3_k127_4190510_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 539.0
MMD3_k127_4190510_60 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000005687 163.0
MMD3_k127_4190510_61 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000001094 160.0
MMD3_k127_4190510_62 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000007367 159.0
MMD3_k127_4190510_63 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000000000000000000000000007588 158.0
MMD3_k127_4190510_64 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.00000000000000000000000000000000000001814 149.0
MMD3_k127_4190510_65 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000000000000000000000001141 150.0
MMD3_k127_4190510_66 PTS system mannose fructose sorbose family IID component K02795,K02796 - - 0.0000000000000000000000000000000000008557 149.0
MMD3_k127_4190510_67 PFAM Uncharacterised protein family UPF0079, ATPase K06925 - - 0.000000000000000000000000000000000001293 147.0
MMD3_k127_4190510_68 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000431 128.0
MMD3_k127_4190510_69 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.00000000000000000000000000003221 122.0
MMD3_k127_4190510_7 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 531.0
MMD3_k127_4190510_70 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000002157 119.0
MMD3_k127_4190510_71 PTS system sorbose subfamily IIB component K02794 - 2.7.1.191 0.0000000000000000000000000003085 121.0
MMD3_k127_4190510_72 Protein involved in outer membrane biogenesis K01176,K21429 - 3.2.1.1 0.0000000000000000000000000008951 127.0
MMD3_k127_4190510_73 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000009099 112.0
MMD3_k127_4190510_74 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000000001506 105.0
MMD3_k127_4190510_76 PFAM Membrane protein of K08972 - - 0.0000000000000000000000128 105.0
MMD3_k127_4190510_77 OstA-like protein K09774 - - 0.00000000000000000000002782 105.0
MMD3_k127_4190510_78 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000004436 109.0
MMD3_k127_4190510_79 anti-sigma regulatory factor K04757 - 2.7.11.1 0.00000000000000000000006442 104.0
MMD3_k127_4190510_8 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 496.0
MMD3_k127_4190510_80 - - - - 0.000000000000000000001198 100.0
MMD3_k127_4190510_82 helix_turn_helix, Lux Regulon - - - 0.0000000000000000005327 95.0
MMD3_k127_4190510_83 Uncharacterized conserved protein (DUF2304) K09153 - - 0.000000000000000001031 90.0
MMD3_k127_4190510_84 glycosyl transferase, family 2 - - - 0.00000000000000007223 92.0
MMD3_k127_4190510_85 PTS system sorbose-specific iic component K02795 - - 0.0000000000000002815 89.0
MMD3_k127_4190510_86 antisigma factor binding K04749 - - 0.000000000000001326 81.0
MMD3_k127_4190510_87 - - - - 0.00000000000000336 77.0
MMD3_k127_4190510_88 Pfam:Pyridox_oxidase - - - 0.000000000000225 79.0
MMD3_k127_4190510_9 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 494.0
MMD3_k127_4190510_90 4Fe-4S dicluster domain - - - 0.000000000001837 77.0
MMD3_k127_4190510_91 Histidine kinase - - - 0.0000000000063 78.0
MMD3_k127_4190510_92 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000002549 68.0
MMD3_k127_4190510_93 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000004658 73.0
MMD3_k127_4190510_94 Protein conserved in bacteria K11719 - - 0.0000000002422 68.0
MMD3_k127_4190510_95 Tetratricopeptide repeat - - - 0.0000000005763 70.0
MMD3_k127_4190510_96 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.000000002867 67.0
MMD3_k127_4190510_97 - - - - 0.000000006681 61.0
MMD3_k127_4190510_98 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.000000007411 68.0
MMD3_k127_4190510_99 SEC-C motif - - - 0.00000002041 57.0
MMD3_k127_4198452_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000006514 208.0
MMD3_k127_4244971_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 297.0
MMD3_k127_4244971_1 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000001055 204.0
MMD3_k127_4244971_2 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000475 185.0
MMD3_k127_4244971_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000466 105.0
MMD3_k127_4244971_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0002065 44.0
MMD3_k127_4308677_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 546.0
MMD3_k127_4308677_1 Prokaryotic N-terminal methylation motif K02650 - - 0.000000000000000000001119 97.0
MMD3_k127_4308677_2 - - - - 0.000000001074 62.0
MMD3_k127_4364493_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 6.093e-306 948.0
MMD3_k127_4364493_1 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 2.424e-270 865.0
MMD3_k127_4364493_10 histidine kinase A domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 426.0
MMD3_k127_4364493_11 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008677,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 368.0
MMD3_k127_4364493_12 COGs COG2220 Zn-dependent hydrolase of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 353.0
MMD3_k127_4364493_13 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008007 338.0
MMD3_k127_4364493_14 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 294.0
MMD3_k127_4364493_15 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 293.0
MMD3_k127_4364493_16 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000153 266.0
MMD3_k127_4364493_17 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001286 242.0
MMD3_k127_4364493_18 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001433 237.0
MMD3_k127_4364493_19 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000005438 226.0
MMD3_k127_4364493_2 Bacterial transcriptional activator domain - - - 6.773e-221 723.0
MMD3_k127_4364493_20 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000005045 224.0
MMD3_k127_4364493_21 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000002377 218.0
MMD3_k127_4364493_22 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000001297 215.0
MMD3_k127_4364493_23 CGGC - - - 0.00000000000000000000000000000000000000000000000000000000005182 208.0
MMD3_k127_4364493_24 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000003516 208.0
MMD3_k127_4364493_25 Belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000007981 198.0
MMD3_k127_4364493_26 domain protein - - - 0.0000000000000000000000000000000000000000000000007596 199.0
MMD3_k127_4364493_27 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000003319 176.0
MMD3_k127_4364493_28 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000414 176.0
MMD3_k127_4364493_29 AMP binding - - - 0.000000000000000000000000000000000000000000002199 182.0
MMD3_k127_4364493_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 9.949e-198 630.0
MMD3_k127_4364493_30 THIoesterase K18700 - 3.1.2.29 0.00000000000000000000000000000000000000000000341 166.0
MMD3_k127_4364493_31 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000004391 167.0
MMD3_k127_4364493_32 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.0000000000000000000000000000000000000000003121 162.0
MMD3_k127_4364493_33 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000007841 151.0
MMD3_k127_4364493_34 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000001884 135.0
MMD3_k127_4364493_36 Protein of unknown function (DUF1189) - - - 0.000000000000000000000008421 113.0
MMD3_k127_4364493_37 - - - - 0.000000000000001089 78.0
MMD3_k127_4364493_38 - - - - 0.000000001067 67.0
MMD3_k127_4364493_39 Ami_2 - - - 0.000000007787 69.0
MMD3_k127_4364493_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007463 486.0
MMD3_k127_4364493_40 Tautomerase enzyme K01821 - 5.3.2.6 0.00000002817 55.0
MMD3_k127_4364493_41 Protein of unknown function DUF72 - - - 0.0000001793 57.0
MMD3_k127_4364493_42 Protein of unknown function (DUF3494) - - - 0.0000007529 52.0
MMD3_k127_4364493_44 Tetratricopeptide repeat - - - 0.0001413 51.0
MMD3_k127_4364493_45 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0005303 44.0
MMD3_k127_4364493_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 506.0
MMD3_k127_4364493_6 membrane organization K20543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 481.0
MMD3_k127_4364493_7 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 468.0
MMD3_k127_4364493_8 Chromate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 446.0
MMD3_k127_4364493_9 Pyridoxal-phosphate dependent enzyme K01738,K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 439.0
MMD3_k127_4504004_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.966e-227 716.0
MMD3_k127_4504004_1 General secretory system II, protein E domain protein K02454 - - 8.109e-217 689.0
MMD3_k127_4504004_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 501.0
MMD3_k127_4504004_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0050897,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 435.0
MMD3_k127_4504004_4 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 352.0
MMD3_k127_4504004_5 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000006509 224.0
MMD3_k127_4504004_6 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000000000000000000000007371 190.0
MMD3_k127_4504004_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000003137 171.0
MMD3_k127_4542902_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1227.0
MMD3_k127_4542902_1 FtsX-like permease family K02004 - - 0.0 1011.0
MMD3_k127_4542902_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001374 280.0
MMD3_k127_4542902_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003144 265.0
MMD3_k127_4542902_12 PFAM aldo keto reductase K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002771 268.0
MMD3_k127_4542902_13 Cellulose biosynthesis protein BcsQ K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001798 256.0
MMD3_k127_4542902_14 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000221 239.0
MMD3_k127_4542902_15 AMP binding - - - 0.00000000000000000000000000000000000000000000000000000000003158 216.0
MMD3_k127_4542902_16 Sigma-70, region 4 K02405 - - 0.000000000000000000000000000000000000000000000000006328 195.0
MMD3_k127_4542902_17 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000001627 166.0
MMD3_k127_4542902_18 Ankyrin repeat - - - 0.0000000000000000000000000000006309 141.0
MMD3_k127_4542902_19 DNA-binding transcription factor activity K03710 - - 0.000000000000000000000000000001113 131.0
MMD3_k127_4542902_2 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 3.98e-241 767.0
MMD3_k127_4542902_20 Bacterial protein of unknown function (DUF922) - - - 0.00000000000000000000000002524 117.0
MMD3_k127_4542902_21 - - - - 0.000000000000000000001204 106.0
MMD3_k127_4542902_22 STAS domain - - - 0.0000000000000000000103 96.0
MMD3_k127_4542902_23 PFAM CheW domain protein K03408 - - 0.0000000006119 60.0
MMD3_k127_4542902_24 Belongs to the universal stress protein A family - - - 0.0000009166 57.0
MMD3_k127_4542902_25 PFAM Anti-sigma-28 factor FlgM family protein K02398 - - 0.0000368 49.0
MMD3_k127_4542902_26 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0003947 51.0
MMD3_k127_4542902_27 formate dehydrogenase K00127 - - 0.0004194 53.0
MMD3_k127_4542902_3 membrane transporter protein K07090 - - 4.568e-208 653.0
MMD3_k127_4542902_4 phosphorelay signal transduction system K02584,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 465.0
MMD3_k127_4542902_5 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 446.0
MMD3_k127_4542902_6 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 439.0
MMD3_k127_4542902_7 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 409.0
MMD3_k127_4542902_8 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 372.0
MMD3_k127_4542902_9 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 316.0
MMD3_k127_4545033_0 beta-glucosidase activity K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 526.0
MMD3_k127_4549295_0 PFAM nickel-dependent hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 609.0
MMD3_k127_4549295_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 580.0
MMD3_k127_4549295_10 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 380.0
MMD3_k127_4549295_11 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502 357.0
MMD3_k127_4549295_12 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 293.0
MMD3_k127_4549295_13 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008339 277.0
MMD3_k127_4549295_14 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006887 252.0
MMD3_k127_4549295_15 Peptidase MA superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001482 220.0
MMD3_k127_4549295_16 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000004574 184.0
MMD3_k127_4549295_17 diguanylate cyclase K21020 - 2.7.7.65 0.00000000000000000000000000000000000000000000000002701 198.0
MMD3_k127_4549295_18 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000002038 140.0
MMD3_k127_4549295_19 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000002056 124.0
MMD3_k127_4549295_2 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 480.0
MMD3_k127_4549295_20 Sh3 type 3 domain protein - - - 0.0000000000000001463 93.0
MMD3_k127_4549295_21 - - - - 0.00000000000007597 76.0
MMD3_k127_4549295_22 Sporulation related domain - - - 0.000000002199 67.0
MMD3_k127_4549295_23 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000001287 57.0
MMD3_k127_4549295_25 PilZ domain - - - 0.00009259 53.0
MMD3_k127_4549295_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 474.0
MMD3_k127_4549295_4 B3/4 domain K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 468.0
MMD3_k127_4549295_5 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 457.0
MMD3_k127_4549295_6 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 454.0
MMD3_k127_4549295_7 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 418.0
MMD3_k127_4549295_8 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 440.0
MMD3_k127_4549295_9 TIGRFAM Na Pi-cotransporter II-related protein K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 407.0
MMD3_k127_4563123_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0 1207.0
MMD3_k127_4563123_1 TPR repeat - - - 7.257e-305 954.0
MMD3_k127_4563123_10 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 355.0
MMD3_k127_4563123_11 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 324.0
MMD3_k127_4563123_12 Histidine kinase K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 350.0
MMD3_k127_4563123_13 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 304.0
MMD3_k127_4563123_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003122 287.0
MMD3_k127_4563123_15 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001531 292.0
MMD3_k127_4563123_16 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000001768 266.0
MMD3_k127_4563123_17 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000001313 244.0
MMD3_k127_4563123_18 Response regulator receiver K02485 - - 0.000000000000000000000000000000000000000000000000000000000000003191 220.0
MMD3_k127_4563123_19 polysaccharide deacetylase K11931,K21478 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016787,GO:0016810,GO:0043170,GO:0043412,GO:0071704,GO:0098732 - 0.0000000000000000000000000000000000000000000000000000000000003365 221.0
MMD3_k127_4563123_2 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 569.0
MMD3_k127_4563123_20 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000002326 210.0
MMD3_k127_4563123_21 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000002053 201.0
MMD3_k127_4563123_22 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000001257 186.0
MMD3_k127_4563123_23 carboxylic ester hydrolase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000005254 167.0
MMD3_k127_4563123_24 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000005297 158.0
MMD3_k127_4563123_25 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.00000000000000000000000000154 112.0
MMD3_k127_4563123_26 PFAM Response regulator receiver domain - - - 0.0000000000000000000002427 104.0
MMD3_k127_4563123_27 Histidine kinase-like ATPases - - - 0.00000000000000000001878 108.0
MMD3_k127_4563123_28 GAF domain K02482 - 2.7.13.3 0.0000000000000000001106 104.0
MMD3_k127_4563123_29 Protein of unknown function (DUF2892) - - - 0.00000000000002403 75.0
MMD3_k127_4563123_3 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 502.0
MMD3_k127_4563123_30 E-Z type HEAT repeats - - - 0.00000000008558 74.0
MMD3_k127_4563123_33 regulatory protein AsnC - - - 0.000000004739 63.0
MMD3_k127_4563123_34 PFAM CBS domain containing protein - - - 0.000000007509 60.0
MMD3_k127_4563123_35 Histidine kinase-like ATPase domain - - - 0.0000000107 65.0
MMD3_k127_4563123_36 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000001737 61.0
MMD3_k127_4563123_37 Tetratricopeptide repeat - - - 0.00003376 53.0
MMD3_k127_4563123_38 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0003865 49.0
MMD3_k127_4563123_4 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 478.0
MMD3_k127_4563123_5 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 431.0
MMD3_k127_4563123_6 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 434.0
MMD3_k127_4563123_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 402.0
MMD3_k127_4563123_8 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 391.0
MMD3_k127_4563123_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 387.0
MMD3_k127_4567425_0 4Fe-4S binding domain - - - 5.697e-217 685.0
MMD3_k127_4567425_1 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 599.0
MMD3_k127_4567425_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 364.0
MMD3_k127_4567425_11 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 288.0
MMD3_k127_4567425_12 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004511 283.0
MMD3_k127_4567425_13 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002143 285.0
MMD3_k127_4567425_14 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000184 235.0
MMD3_k127_4567425_15 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000000000000000000000000000000000004366 221.0
MMD3_k127_4567425_16 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000111 224.0
MMD3_k127_4567425_17 cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000008286 184.0
MMD3_k127_4567425_18 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000006196 180.0
MMD3_k127_4567425_19 Lysin motif - - - 0.0000000000000000000000000000000000002591 157.0
MMD3_k127_4567425_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 623.0
MMD3_k127_4567425_20 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.000000000000000000000000000000000004556 145.0
MMD3_k127_4567425_21 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000000000867 113.0
MMD3_k127_4567425_22 Rhodanese Homology Domain - - - 0.000000000000000000843 90.0
MMD3_k127_4567425_23 Protein of unknown function (DUF2905) - - - 0.000000000000000002026 87.0
MMD3_k127_4567425_24 phosphorelay signal transduction system - - - 0.0000000000003049 78.0
MMD3_k127_4567425_3 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 515.0
MMD3_k127_4567425_4 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 505.0
MMD3_k127_4567425_5 TRAP transporter solute receptor TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 496.0
MMD3_k127_4567425_6 PAS domain K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 502.0
MMD3_k127_4567425_7 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 467.0
MMD3_k127_4567425_8 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007092 432.0
MMD3_k127_4567425_9 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 364.0
MMD3_k127_4584179_0 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 528.0
MMD3_k127_4584179_1 PFAM V-type ATPase 116 kDa K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 452.0
MMD3_k127_4584179_10 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000003489 188.0
MMD3_k127_4584179_11 NTPase - - - 0.00000000000000000000000000000000000000000000002837 175.0
MMD3_k127_4584179_12 AMP binding - - - 0.0000000000000000000000000000000000000000000003165 179.0
MMD3_k127_4584179_13 PFAM PHP domain - - - 0.00000000000000000000000000000000000005533 150.0
MMD3_k127_4584179_14 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000001945 136.0
MMD3_k127_4584179_15 GyrI-like small molecule binding domain - - - 0.000000000000000000000000000002069 128.0
MMD3_k127_4584179_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001839 125.0
MMD3_k127_4584179_17 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000006275 117.0
MMD3_k127_4584179_18 GDP-mannose mannosyl hydrolase activity - - - 0.0000000000000000000000001038 108.0
MMD3_k127_4584179_19 - - - - 0.000000000000000000001692 99.0
MMD3_k127_4584179_2 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 437.0
MMD3_k127_4584179_20 protein histidine kinase activity - - - 0.000000000000000000007435 100.0
MMD3_k127_4584179_22 Uncharacterized protein conserved in bacteria (DUF2169) K15352,K18555 - - 0.000000000001581 76.0
MMD3_k127_4584179_23 cheY-homologous receiver domain - - - 0.000000000002161 77.0
MMD3_k127_4584179_24 Histidine Phosphotransfer domain K11527 - 2.7.13.3 0.00000000001109 75.0
MMD3_k127_4584179_25 Helix-turn-helix domain K15539 - - 0.0000000004737 64.0
MMD3_k127_4584179_26 Calcineurin-like phosphoesterase - - - 0.000000002999 68.0
MMD3_k127_4584179_27 Putative regulatory protein - - - 0.00002119 49.0
MMD3_k127_4584179_3 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 358.0
MMD3_k127_4584179_4 Transcriptional regulator K11921,K19338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 329.0
MMD3_k127_4584179_5 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 302.0
MMD3_k127_4584179_6 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002796 281.0
MMD3_k127_4584179_7 histidine kinase, HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007117 280.0
MMD3_k127_4584179_8 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001038 264.0
MMD3_k127_4584179_9 Peptidase family M54 K06974 - - 0.0000000000000000000000000000000000000000000000000000000000000003526 224.0
MMD3_k127_4612339_0 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000001458 183.0
MMD3_k127_4612339_1 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000001011 165.0
MMD3_k127_4612339_2 Alpha/beta hydrolase family - - - 0.00000002322 58.0
MMD3_k127_4612339_3 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0006648 44.0
MMD3_k127_4629915_0 Outer membrane usher protein K07347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 465.0
MMD3_k127_4629915_1 pilus organization K07346 - - 0.000000000000000000000000000000000000000001629 163.0
MMD3_k127_4636781_0 Parallel beta-helix repeat-containing protein - - - 0.00008556 54.0
MMD3_k127_4659122_0 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000002958 177.0
MMD3_k127_4659122_1 Sigma-70 region 2 K03088 - - 0.000000008282 57.0
MMD3_k127_4719766_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 595.0
MMD3_k127_4719766_1 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 449.0
MMD3_k127_4719766_10 Ribosomal protein L6 K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000004212 224.0
MMD3_k127_4719766_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000001102 208.0
MMD3_k127_4719766_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001917 196.0
MMD3_k127_4719766_13 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000009421 181.0
MMD3_k127_4719766_14 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000006671 192.0
MMD3_k127_4719766_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000003974 175.0
MMD3_k127_4719766_16 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000003148 172.0
MMD3_k127_4719766_17 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000002321 181.0
MMD3_k127_4719766_18 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000003245 146.0
MMD3_k127_4719766_19 PFAM ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000001076 146.0
MMD3_k127_4719766_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 412.0
MMD3_k127_4719766_20 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000001008 139.0
MMD3_k127_4719766_21 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000001247 135.0
MMD3_k127_4719766_23 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000004013 99.0
MMD3_k127_4719766_24 Formiminotransferase-cyclodeaminase - - - 0.00000000000000000000009564 102.0
MMD3_k127_4719766_25 Ribosomal protein L30 K02907 - - 0.0000000000001841 72.0
MMD3_k127_4719766_26 Ribosomal protein L36 K02919 - - 0.000000000001046 68.0
MMD3_k127_4719766_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 385.0
MMD3_k127_4719766_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 331.0
MMD3_k127_4719766_5 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 321.0
MMD3_k127_4719766_6 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 325.0
MMD3_k127_4719766_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 296.0
MMD3_k127_4719766_8 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000268 253.0
MMD3_k127_4719766_9 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000665 236.0
MMD3_k127_4738766_0 BadF BadG BcrA BcrD - - - 0.0 1429.0
MMD3_k127_4738766_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.582e-304 945.0
MMD3_k127_4738766_10 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 381.0
MMD3_k127_4738766_11 Domains HisKA, HATPase_c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 348.0
MMD3_k127_4738766_12 PFAM ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 319.0
MMD3_k127_4738766_13 DJ-1/PfpI family K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000002745 259.0
MMD3_k127_4738766_14 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000468 255.0
MMD3_k127_4738766_15 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000002941 250.0
MMD3_k127_4738766_16 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000666 245.0
MMD3_k127_4738766_17 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000001677 228.0
MMD3_k127_4738766_18 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000002759 223.0
MMD3_k127_4738766_19 protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000004444 194.0
MMD3_k127_4738766_2 Domain in cystathionine beta-synthase and other proteins. K07182 - - 2.405e-260 817.0
MMD3_k127_4738766_20 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000005916 166.0
MMD3_k127_4738766_21 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000002071 162.0
MMD3_k127_4738766_22 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.000000000000000000000000000000000000000001113 161.0
MMD3_k127_4738766_23 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000002318 158.0
MMD3_k127_4738766_24 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000237 161.0
MMD3_k127_4738766_25 Domain of unknown function (DUF4253) - - - 0.0000000000000000000000000000000006382 141.0
MMD3_k127_4738766_26 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000001964 118.0
MMD3_k127_4738766_27 Protein involved in formate dehydrogenase formation K02380 - - 0.000000000000000000000000003502 121.0
MMD3_k127_4738766_28 Protein of unknown function, DUF485 - - - 0.000000000000000000000000003725 113.0
MMD3_k127_4738766_29 - - - - 0.000000000000000000000006332 111.0
MMD3_k127_4738766_3 Tripartite tricarboxylate transporter TctA family K07793 - - 6.746e-245 764.0
MMD3_k127_4738766_30 Ferredoxin - - - 0.000000000000000000001055 100.0
MMD3_k127_4738766_31 heat shock protein binding - - - 0.0000000000000000005488 101.0
MMD3_k127_4738766_32 Copper chaperone K07213 - - 0.000000000007246 67.0
MMD3_k127_4738766_33 response regulator, receiver - - - 0.000002925 57.0
MMD3_k127_4738766_34 DSBA-like thioredoxin domain - - - 0.00001726 51.0
MMD3_k127_4738766_4 glycolate transport K14393 - - 6.694e-232 731.0
MMD3_k127_4738766_5 PFAM SufBD protein K07033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 499.0
MMD3_k127_4738766_6 response regulator K02481,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 495.0
MMD3_k127_4738766_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 466.0
MMD3_k127_4738766_8 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 453.0
MMD3_k127_4738766_9 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 408.0
MMD3_k127_4783663_0 Phosphopantetheine attachment site - - - 0.0 1272.0
MMD3_k127_4783663_1 Glucodextranase, domain N K01178 - 3.2.1.3 0.0 1074.0
MMD3_k127_4783663_10 Secretion ATPase, PEP-CTERM locus subfamily K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 360.0
MMD3_k127_4783663_11 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 361.0
MMD3_k127_4783663_12 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 314.0
MMD3_k127_4783663_13 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 305.0
MMD3_k127_4783663_14 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 332.0
MMD3_k127_4783663_15 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 303.0
MMD3_k127_4783663_16 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 288.0
MMD3_k127_4783663_17 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 303.0
MMD3_k127_4783663_18 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003076 286.0
MMD3_k127_4783663_19 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000154 274.0
MMD3_k127_4783663_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 617.0
MMD3_k127_4783663_20 Ompa motb domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007019 287.0
MMD3_k127_4783663_21 PFAM Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008533 253.0
MMD3_k127_4783663_22 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001247 261.0
MMD3_k127_4783663_23 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.000000000000000000000000000000000000000000000000000000000000000001431 235.0
MMD3_k127_4783663_24 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000002769 231.0
MMD3_k127_4783663_25 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000006553 224.0
MMD3_k127_4783663_26 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000003081 243.0
MMD3_k127_4783663_27 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000001347 202.0
MMD3_k127_4783663_28 peroxiredoxin activity K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000001607 182.0
MMD3_k127_4783663_29 - - - - 0.000000000000000000000000000000000000000000000002721 177.0
MMD3_k127_4783663_3 Histidine kinase HAMP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 565.0
MMD3_k127_4783663_30 Transcription termination factor nusG - - - 0.00000000000000000000000000000000000000000005061 166.0
MMD3_k127_4783663_31 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000000000000000000000008397 177.0
MMD3_k127_4783663_32 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000001982 162.0
MMD3_k127_4783663_33 - - - - 0.0000000000000000000000000000000000000000002994 161.0
MMD3_k127_4783663_34 Secreted repeat of unknown function - - - 0.0000000000000000000000000000000000000002022 154.0
MMD3_k127_4783663_35 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.000000000000000000000000000000000001591 143.0
MMD3_k127_4783663_36 Conserved repeat domain - - - 0.0000000000000000000000000000000002542 150.0
MMD3_k127_4783663_37 - - - - 0.000000000000000000000000000000000264 141.0
MMD3_k127_4783663_39 Domain of unknown function DUF11 - - - 0.0000000000000000000000000001652 135.0
MMD3_k127_4783663_4 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 514.0
MMD3_k127_4783663_40 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000007313 112.0
MMD3_k127_4783663_41 - - - - 0.0000000000000000000001072 102.0
MMD3_k127_4783663_42 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.00000000000000000001156 98.0
MMD3_k127_4783663_43 PFAM Response regulator receiver domain - - - 0.00000000000000000001357 96.0
MMD3_k127_4783663_44 1,4-alpha-glucan branching enzyme activity - - - 0.0000000000000000847 84.0
MMD3_k127_4783663_45 PFAM response regulator receiver - - - 0.00000000000000008766 85.0
MMD3_k127_4783663_47 SEC-C motif - - - 0.00000003725 57.0
MMD3_k127_4783663_48 cheY-homologous receiver domain - - - 0.00007501 53.0
MMD3_k127_4783663_49 Heat shock 70 kDa protein K04043 - - 0.0006604 49.0
MMD3_k127_4783663_5 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 504.0
MMD3_k127_4783663_6 guanyl-nucleotide exchange factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 451.0
MMD3_k127_4783663_7 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 408.0
MMD3_k127_4783663_8 phenylacetate-CoA ligase activity K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 386.0
MMD3_k127_4783663_9 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 381.0
MMD3_k127_4832401_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 337.0
MMD3_k127_4832401_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004699 266.0
MMD3_k127_4832401_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000001778 246.0
MMD3_k127_4884557_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 1.004e-234 761.0
MMD3_k127_4884557_1 Proton-conducting membrane transporter - - - 7.448e-224 716.0
MMD3_k127_4884557_10 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006846 241.0
MMD3_k127_4884557_11 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000003902 238.0
MMD3_k127_4884557_12 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000004565 199.0
MMD3_k127_4884557_13 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K12141 - - 0.00000000000000000000000000000000000000000000000000002761 192.0
MMD3_k127_4884557_14 - - - - 0.000000000000000000000000000000000001764 148.0
MMD3_k127_4884557_2 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 2.588e-222 700.0
MMD3_k127_4884557_3 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 4.937e-199 642.0
MMD3_k127_4884557_4 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 525.0
MMD3_k127_4884557_5 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 442.0
MMD3_k127_4884557_6 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 434.0
MMD3_k127_4884557_7 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 394.0
MMD3_k127_4884557_8 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 321.0
MMD3_k127_4884557_9 Hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003177 253.0
MMD3_k127_489828_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 615.0
MMD3_k127_489828_1 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 559.0
MMD3_k127_489828_10 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000008996 135.0
MMD3_k127_489828_11 YGGT family K02221 - - 0.00000000000000000000000000006053 118.0
MMD3_k127_489828_12 DivIVA protein K04074 - - 0.000000000000000000000004834 109.0
MMD3_k127_489828_13 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000002725 100.0
MMD3_k127_489828_14 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000007109 91.0
MMD3_k127_489828_15 Probable transposase K07496 - - 0.00000000000007844 74.0
MMD3_k127_489828_16 DisA bacterial checkpoint controller nucleotide-binding - - - 0.00000008619 54.0
MMD3_k127_489828_17 Evidence 5 No homology to any previously reported sequences - - - 0.00001211 54.0
MMD3_k127_489828_2 serine-type endopeptidase activity K04772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 515.0
MMD3_k127_489828_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 293.0
MMD3_k127_489828_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003613 261.0
MMD3_k127_489828_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000002572 196.0
MMD3_k127_489828_6 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000000000000000003516 145.0
MMD3_k127_489828_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000003544 143.0
MMD3_k127_489828_8 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000005617 141.0
MMD3_k127_489828_9 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000025 136.0
MMD3_k127_4903523_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 437.0
MMD3_k127_4903523_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 377.0
MMD3_k127_4903523_2 PFAM NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 372.0
MMD3_k127_4903523_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000001646 194.0
MMD3_k127_4903523_4 Ribosomal protein S9/S16 K02996 - - 0.00000000000000000000000000000000000000000000000004377 181.0
MMD3_k127_4903523_5 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000004654 155.0
MMD3_k127_4903523_6 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000003257 85.0
MMD3_k127_5076063_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 440.0
MMD3_k127_5076063_2 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00000000000000001279 96.0
MMD3_k127_5076063_3 to the N-terminal region of K07491 - - 0.00000000000000001902 87.0
MMD3_k127_5076063_4 - - - - 0.00000000002227 70.0
MMD3_k127_5076063_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000003441 64.0
MMD3_k127_544426_0 Cation transporter/ATPase, N-terminus K01531,K12955 - 3.6.3.2 0.0 1163.0
MMD3_k127_544426_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0 1013.0
MMD3_k127_544426_10 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 367.0
MMD3_k127_544426_11 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 304.0
MMD3_k127_544426_12 Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons K01563 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000006589 251.0
MMD3_k127_544426_13 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001837 245.0
MMD3_k127_544426_14 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000001482 220.0
MMD3_k127_544426_15 - - - - 0.000000000000000000000000000000000000000000000000004222 190.0
MMD3_k127_544426_16 pfam nudix - - - 0.000000000000000000000000000000000000000000000000004459 186.0
MMD3_k127_544426_17 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000001693 182.0
MMD3_k127_544426_18 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000001988 167.0
MMD3_k127_544426_2 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 1.245e-298 921.0
MMD3_k127_544426_20 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000003306 151.0
MMD3_k127_544426_21 Uncharacterized ACR, COG1678 - - - 0.0000000000000000000000000000000000002147 150.0
MMD3_k127_544426_22 Histidine kinase K02660,K11525 - - 0.00000000000000000000000000000000009477 150.0
MMD3_k127_544426_23 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.0000000000000000000000000003519 125.0
MMD3_k127_544426_24 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000008162 114.0
MMD3_k127_544426_25 membrane K08978 - - 0.0000000000000000000000001181 111.0
MMD3_k127_544426_27 TonB C terminal K03646,K03832 - - 0.00000000007081 71.0
MMD3_k127_544426_28 Protein of unknown function (DUF1523) - - - 0.000000007162 63.0
MMD3_k127_544426_29 PhoQ Sensor - - - 0.00000002968 66.0
MMD3_k127_544426_3 FMN binding - - - 1.101e-276 857.0
MMD3_k127_544426_30 - - - - 0.0000001584 60.0
MMD3_k127_544426_31 DJ-1/PfpI family K03152 - 3.5.1.124 0.00005972 45.0
MMD3_k127_544426_4 Protein of unknown function, DUF255 K06888 - - 2.268e-228 728.0
MMD3_k127_544426_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 644.0
MMD3_k127_544426_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 517.0
MMD3_k127_544426_7 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 396.0
MMD3_k127_544426_8 Ribonuclease R winged-helix domain K09720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 387.0
MMD3_k127_544426_9 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 387.0
MMD3_k127_54572_0 exo-alpha-(2->6)-sialidase activity - - - 0.000000004366 68.0
MMD3_k127_566320_0 Glycosyl hydrolase family 57 - - - 1.219e-204 659.0
MMD3_k127_566320_1 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 618.0
MMD3_k127_566320_2 Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 587.0
MMD3_k127_566320_3 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 520.0
MMD3_k127_566320_4 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 454.0
MMD3_k127_566320_5 nucleotidyltransferase activity K07075 - - 0.00000000000000000000000000000000000000000000002144 177.0
MMD3_k127_566320_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000773 166.0
MMD3_k127_566320_7 Uncharacterized conserved protein (DUF2249) - - - 0.000000000000000000000009689 103.0
MMD3_k127_566320_8 cell cycle K05589,K12065,K13052 - - 0.0000000001359 67.0
MMD3_k127_566320_9 electron transfer activity K05337,K17247 - - 0.0000000004574 61.0
MMD3_k127_57167_0 PFAM natural resistance-associated macrophage protein - - - 1.311e-209 657.0
MMD3_k127_57167_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 3.497e-196 620.0
MMD3_k127_57167_10 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000009719 199.0
MMD3_k127_57167_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000000000000000000000000000915 180.0
MMD3_k127_57167_12 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000003129 174.0
MMD3_k127_57167_13 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571,K01960 - 4.1.1.3,6.4.1.1 0.0000000000000000000000000000000000000000000112 167.0
MMD3_k127_57167_14 Roadblock/LC7 domain - - - 0.000000000000000000000001941 106.0
MMD3_k127_57167_15 sodium-dependent phosphate transmembrane transporter activity - - - 0.00000000000000002769 90.0
MMD3_k127_57167_16 Tetratricopeptide repeat - - - 0.00000000000004116 86.0
MMD3_k127_57167_2 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 608.0
MMD3_k127_57167_3 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 419.0
MMD3_k127_57167_4 Receptor family ligand binding region K01999 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0070728,GO:0071702,GO:0071705 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 385.0
MMD3_k127_57167_5 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 368.0
MMD3_k127_57167_6 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 323.0
MMD3_k127_57167_7 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 313.0
MMD3_k127_57167_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005453 269.0
MMD3_k127_57167_9 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000001719 198.0
MMD3_k127_690437_0 Nucleotidyltransferase - - - 0.000000000000000000000002909 110.0
MMD3_k127_690437_1 cyclopropane-fatty-acyl-phospholipid synthase K00574,K15256,K15257 - 2.1.1.79 0.0000000000000000000355 91.0
MMD3_k127_690437_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000516 91.0
MMD3_k127_690437_3 PFAM Beta-lactamase - - - 0.0000000005866 63.0
MMD3_k127_695994_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.128e-239 756.0
MMD3_k127_695994_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 7.674e-219 702.0
MMD3_k127_695994_10 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 365.0
MMD3_k127_695994_11 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 372.0
MMD3_k127_695994_12 ABC transporter, permease protein K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 360.0
MMD3_k127_695994_13 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 319.0
MMD3_k127_695994_14 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 317.0
MMD3_k127_695994_15 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 303.0
MMD3_k127_695994_16 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 302.0
MMD3_k127_695994_17 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002565 288.0
MMD3_k127_695994_18 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002156 277.0
MMD3_k127_695994_19 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000008376 252.0
MMD3_k127_695994_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 1.756e-211 666.0
MMD3_k127_695994_20 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006297 244.0
MMD3_k127_695994_21 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001214 233.0
MMD3_k127_695994_22 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000004326 235.0
MMD3_k127_695994_23 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000007168 195.0
MMD3_k127_695994_24 Pfam:DUF479 - - - 0.0000000000000000000000000000000000000000000000000002014 191.0
MMD3_k127_695994_25 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000005268 207.0
MMD3_k127_695994_26 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000006165 174.0
MMD3_k127_695994_27 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000000000000000000000000000000000000000002831 166.0
MMD3_k127_695994_28 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000003256 168.0
MMD3_k127_695994_29 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000008364 172.0
MMD3_k127_695994_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 3.387e-195 619.0
MMD3_k127_695994_30 Pfam:N_methyl_2 K02456 - - 0.0000000000000000000000000000000000003485 144.0
MMD3_k127_695994_31 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000002421 140.0
MMD3_k127_695994_32 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000004276 137.0
MMD3_k127_695994_33 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000006296 138.0
MMD3_k127_695994_34 Nitroreductase family - - - 0.0000000000000000000000000000000152 133.0
MMD3_k127_695994_35 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000001806 122.0
MMD3_k127_695994_36 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000001726 117.0
MMD3_k127_695994_37 Transcriptional regulator - - - 0.0000000000000000000000000005499 121.0
MMD3_k127_695994_38 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000001169 106.0
MMD3_k127_695994_39 Pilus assembly protein K02662 - - 0.0000000000000000001161 100.0
MMD3_k127_695994_4 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 538.0
MMD3_k127_695994_40 - - - - 0.000000000000007313 82.0
MMD3_k127_695994_42 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000002118 67.0
MMD3_k127_695994_43 - - - - 0.0000000009095 68.0
MMD3_k127_695994_44 Copper binding proteins, plastocyanin/azurin family - - - 0.000000001292 65.0
MMD3_k127_695994_45 ATP-independent chaperone mediated protein folding - - - 0.000000008323 63.0
MMD3_k127_695994_46 Pilus assembly protein, PilO K02664 - - 0.00000001143 63.0
MMD3_k127_695994_47 PFAM Fimbrial assembly family protein K02461,K02662,K02663,K12289 - - 0.000001569 58.0
MMD3_k127_695994_5 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 487.0
MMD3_k127_695994_6 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009447 469.0
MMD3_k127_695994_7 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 456.0
MMD3_k127_695994_8 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 394.0
MMD3_k127_695994_9 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 386.0
MMD3_k127_696131_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 526.0
MMD3_k127_696131_1 Alpha/beta hydrolase family K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 416.0
MMD3_k127_696131_11 Alpha/beta hydrolase family - - - 0.0003912 43.0
MMD3_k127_696131_2 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 425.0
MMD3_k127_696131_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 322.0
MMD3_k127_696131_4 Belongs to the sulfate adenylyltransferase family K00958,K13811 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 293.0
MMD3_k127_696131_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000009466 233.0
MMD3_k127_696131_6 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001585 238.0
MMD3_k127_696131_7 - - - - 0.00000000000001446 83.0
MMD3_k127_696131_8 peptidyl-tyrosine sulfation - - - 0.000000000005649 73.0
MMD3_k127_723883_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 9.304e-267 831.0
MMD3_k127_723883_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.202e-227 714.0
MMD3_k127_723883_10 Flavodoxin-like fold K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006148 263.0
MMD3_k127_723883_11 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005534 260.0
MMD3_k127_723883_12 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000001111 233.0
MMD3_k127_723883_13 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000003462 228.0
MMD3_k127_723883_14 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000001696 222.0
MMD3_k127_723883_15 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000008035 216.0
MMD3_k127_723883_16 Cytochrome c mono- and diheme variants - - - 0.000000000000000000000000000000000000000000000000000003561 197.0
MMD3_k127_723883_17 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000001142 186.0
MMD3_k127_723883_18 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000006449 154.0
MMD3_k127_723883_19 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406,K03776 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0016020,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0042802,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0051716,GO:0052128,GO:0052131,GO:0065007,GO:0071944 - 0.000000000000000000000000008755 113.0
MMD3_k127_723883_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.939e-212 671.0
MMD3_k127_723883_20 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00000000000000000000000002006 117.0
MMD3_k127_723883_21 Protein of unknown function (DUF465) K09794 - - 0.0000000002758 63.0
MMD3_k127_723883_22 PFAM NHL repeat containing protein - - - 0.00000008868 62.0
MMD3_k127_723883_23 mercury ion transmembrane transporter activity K07213 - - 0.0000001135 56.0
MMD3_k127_723883_24 Glycosyltransferase family 87 - - - 0.000008079 55.0
MMD3_k127_723883_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.26e-201 635.0
MMD3_k127_723883_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 595.0
MMD3_k127_723883_5 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 552.0
MMD3_k127_723883_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 532.0
MMD3_k127_723883_7 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 528.0
MMD3_k127_723883_8 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 489.0
MMD3_k127_723883_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000005074 260.0
MMD3_k127_729293_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1251.0
MMD3_k127_729293_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.692e-268 842.0
MMD3_k127_729293_10 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 381.0
MMD3_k127_729293_11 Metal-dependent phosphohydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009431 391.0
MMD3_k127_729293_12 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 357.0
MMD3_k127_729293_13 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 359.0
MMD3_k127_729293_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 351.0
MMD3_k127_729293_15 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 333.0
MMD3_k127_729293_16 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 331.0
MMD3_k127_729293_17 proteolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 296.0
MMD3_k127_729293_18 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 289.0
MMD3_k127_729293_19 Belongs to the peptidase M48B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006469 278.0
MMD3_k127_729293_2 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 505.0
MMD3_k127_729293_20 Methyltransferase type 11 K00598 - 2.1.1.144 0.000000000000000000000000000000000000000000000000000000000000000000000002771 252.0
MMD3_k127_729293_21 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000028 250.0
MMD3_k127_729293_22 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001677 231.0
MMD3_k127_729293_23 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000000000000000000001853 233.0
MMD3_k127_729293_24 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000000000000000000000000001916 216.0
MMD3_k127_729293_25 Nitroreductase family K04719 - 1.13.11.79 0.0000000000000000000000000000000000000000000000000000000002615 207.0
MMD3_k127_729293_26 RibD C-terminal domain K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000001597 199.0
MMD3_k127_729293_27 TPM domain - - - 0.00000000000000000000000000000000000000000000000000003631 194.0
MMD3_k127_729293_28 PFAM 3-demethylubiquinone-9 K04750 - - 0.000000000000000000000000000000000000000000000000000975 188.0
MMD3_k127_729293_29 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000001014 186.0
MMD3_k127_729293_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 475.0
MMD3_k127_729293_30 Diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.00000000000000000000000000000000000000000000000009255 186.0
MMD3_k127_729293_31 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000004584 173.0
MMD3_k127_729293_33 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.0000000000000000000000000000000000000002075 153.0
MMD3_k127_729293_34 SnoaL-like domain - - - 0.00000000000000000000000000000000000001373 148.0
MMD3_k127_729293_35 Dihaem cytochrome c - - - 0.000000000000000000000000000000000002749 143.0
MMD3_k127_729293_36 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000035 141.0
MMD3_k127_729293_37 - - - - 0.0000000000000000000000000000000001846 141.0
MMD3_k127_729293_38 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000003085 131.0
MMD3_k127_729293_39 Smr domain - - - 0.0000000000000000000000000000143 120.0
MMD3_k127_729293_4 Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 479.0
MMD3_k127_729293_40 - - - - 0.0000000000000000000000000003263 119.0
MMD3_k127_729293_41 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000003506 120.0
MMD3_k127_729293_42 part of a sulfur-relay system K11179 - - 0.00000000000000000000000004675 110.0
MMD3_k127_729293_43 Histidine kinase K07641,K07642,K07711 - 2.7.13.3 0.00000000000000000000002749 112.0
MMD3_k127_729293_45 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000003219 81.0
MMD3_k127_729293_46 - - - - 0.00000000000004407 78.0
MMD3_k127_729293_48 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000008742 67.0
MMD3_k127_729293_49 Uncharacterized integral membrane protein (DUF2301) - - - 0.00000004502 62.0
MMD3_k127_729293_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 475.0
MMD3_k127_729293_52 cheY-homologous receiver domain K02658 - - 0.00001451 55.0
MMD3_k127_729293_53 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752,K13818 - 2.7.7.77 0.0000543 48.0
MMD3_k127_729293_54 PilZ domain - - - 0.0001112 53.0
MMD3_k127_729293_6 DHH family K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 453.0
MMD3_k127_729293_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 462.0
MMD3_k127_729293_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 418.0
MMD3_k127_729293_9 PhoH-like protein K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 390.0
MMD3_k127_737881_0 AcrB/AcrD/AcrF family - - - 0.0 1718.0
MMD3_k127_737881_1 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000008277 220.0
MMD3_k127_741092_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 456.0
MMD3_k127_741092_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 445.0
MMD3_k127_741092_2 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 372.0
MMD3_k127_741092_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000002486 92.0
MMD3_k127_754941_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 9.777e-224 721.0
MMD3_k127_754941_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 610.0
MMD3_k127_754941_10 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 413.0
MMD3_k127_754941_11 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 405.0
MMD3_k127_754941_12 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 386.0
MMD3_k127_754941_13 Beta-ketoacyl synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 373.0
MMD3_k127_754941_14 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 347.0
MMD3_k127_754941_15 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 346.0
MMD3_k127_754941_16 fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 329.0
MMD3_k127_754941_17 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 325.0
MMD3_k127_754941_18 PFAM ATP adenylyltransferase K00988 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 314.0
MMD3_k127_754941_19 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 308.0
MMD3_k127_754941_2 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 591.0
MMD3_k127_754941_20 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 301.0
MMD3_k127_754941_21 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 293.0
MMD3_k127_754941_22 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000003071 269.0
MMD3_k127_754941_23 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001273 257.0
MMD3_k127_754941_24 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008237 258.0
MMD3_k127_754941_25 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000009051 248.0
MMD3_k127_754941_26 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000009657 238.0
MMD3_k127_754941_27 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000002099 241.0
MMD3_k127_754941_28 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000003522 238.0
MMD3_k127_754941_29 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000005267 237.0
MMD3_k127_754941_3 PFAM aminotransferase, class I and II K10206 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0010285,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0033362,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 579.0
MMD3_k127_754941_30 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000000000000000000000000000000000003732 226.0
MMD3_k127_754941_31 - - - - 0.0000000000000000000000000000000000000000000000000000000006948 209.0
MMD3_k127_754941_32 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000006244 199.0
MMD3_k127_754941_33 - - - - 0.0000000000000000000000000000000000000000000003683 174.0
MMD3_k127_754941_34 - - - - 0.0000000000000000000000000000000000000000000004697 170.0
MMD3_k127_754941_35 Peptidase S24-like K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000001771 170.0
MMD3_k127_754941_36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000001653 169.0
MMD3_k127_754941_37 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000002713 166.0
MMD3_k127_754941_38 denitrification pathway - - - 0.0000000000000000000000000000000000000001488 160.0
MMD3_k127_754941_39 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000006579 152.0
MMD3_k127_754941_4 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 572.0
MMD3_k127_754941_40 YCII-related domain - - - 0.000000000000000000000000000000000005705 141.0
MMD3_k127_754941_41 CAAX protease self-immunity - - - 0.00000000000000000000000000000001456 137.0
MMD3_k127_754941_42 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000393 126.0
MMD3_k127_754941_43 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000009402 128.0
MMD3_k127_754941_44 - - - - 0.000000000000000000000000000003597 127.0
MMD3_k127_754941_45 SMART Cold shock protein K03704 - - 0.0000000000000000000000000002016 114.0
MMD3_k127_754941_46 Putative methyltransferase - - - 0.000000000000000000000000004036 123.0
MMD3_k127_754941_47 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.000000000000000000000000007682 112.0
MMD3_k127_754941_48 SMART Cold shock protein K03704 - - 0.000000000000000000000002748 103.0
MMD3_k127_754941_49 Fibronectin type 3 domain - - - 0.000000000000000000000008553 114.0
MMD3_k127_754941_5 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 550.0
MMD3_k127_754941_50 RDD family - - - 0.000000000000000000001599 100.0
MMD3_k127_754941_52 - - - - 0.000000000000000001778 91.0
MMD3_k127_754941_53 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.000000002723 70.0
MMD3_k127_754941_54 rod shape-determining protein MreD K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.000001551 57.0
MMD3_k127_754941_6 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 503.0
MMD3_k127_754941_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 495.0
MMD3_k127_754941_8 Actin K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 486.0
MMD3_k127_754941_9 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 476.0
MMD3_k127_764962_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000006659 190.0
MMD3_k127_764962_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000009169 92.0
MMD3_k127_764962_2 - - - - 0.0000000000000007053 86.0
MMD3_k127_780695_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.331e-283 888.0
MMD3_k127_780695_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 475.0
MMD3_k127_822971_0 PFAM Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 320.0
MMD3_k127_822971_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000003036 215.0
MMD3_k127_822971_2 Methyltransferase domain - - - 0.0000000000005317 70.0
MMD3_k127_822971_3 SnoaL-like domain - - - 0.0002031 44.0
MMD3_k127_936082_0 PFAM ABC transporter related K06020 - 3.6.3.25 1.868e-307 948.0
MMD3_k127_936082_1 ABC transporter K06158 - - 2.482e-233 737.0
MMD3_k127_936082_10 Tetratricopeptide repeat - - - 0.0001719 55.0
MMD3_k127_936082_2 PFAM aminotransferase, class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 590.0
MMD3_k127_936082_3 Transposase, IS605 OrfB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 426.0
MMD3_k127_936082_4 Metal-dependent phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007023 266.0
MMD3_k127_936082_5 Resolvase, N terminal domain K07450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007065 259.0
MMD3_k127_936082_6 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000002991 166.0
MMD3_k127_936082_7 Cupin domain - - - 0.000000000000000000000000000000000000000004087 157.0
MMD3_k127_936082_8 SMART Tetratricopeptide - - - 0.000000000000000000000000004723 118.0
MMD3_k127_936082_9 WD40-like Beta Propeller Repeat K03641,K08676 - - 0.0000000000000000292 95.0
MMD3_k127_940154_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 - 3.6.3.6 1.91e-298 937.0
MMD3_k127_940154_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000004717 235.0
MMD3_k127_940154_2 Bacterial virulence protein (VirJ) - - - 0.0000000000000000000000000000000000000000000000000003062 188.0
MMD3_k127_954331_0 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000008849 237.0
MMD3_k127_954331_1 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.000000000000003944 76.0
MMD3_k127_976709_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 410.0
MMD3_k127_976709_1 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 397.0
MMD3_k127_976709_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 389.0
MMD3_k127_976709_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000112 248.0
MMD3_k127_997178_0 Peptidase family M28 - - - 0.0 1140.0
MMD3_k127_997178_1 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 3.14e-262 821.0
MMD3_k127_997178_10 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 436.0
MMD3_k127_997178_11 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 426.0
MMD3_k127_997178_12 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 426.0
MMD3_k127_997178_13 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 409.0
MMD3_k127_997178_14 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 411.0
MMD3_k127_997178_15 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 419.0
MMD3_k127_997178_16 Fe-S type, tartrate fumarate subfamily, alpha K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 366.0
MMD3_k127_997178_17 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 331.0
MMD3_k127_997178_18 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005103 276.0
MMD3_k127_997178_19 ABC transporter, ATP-binding protein K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007343 277.0
MMD3_k127_997178_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 623.0
MMD3_k127_997178_20 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001399 280.0
MMD3_k127_997178_21 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002698 289.0
MMD3_k127_997178_22 Fumarase C-terminus K01676 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000504 247.0
MMD3_k127_997178_23 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000005253 251.0
MMD3_k127_997178_24 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004154 220.0
MMD3_k127_997178_25 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000003375 222.0
MMD3_k127_997178_26 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000000000000000001923 191.0
MMD3_k127_997178_27 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000000000000000005196 182.0
MMD3_k127_997178_28 PFAM 4Fe-4S K00196 - - 0.00000000000000000000000000000000000000000000001014 177.0
MMD3_k127_997178_29 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000005813 179.0
MMD3_k127_997178_3 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 609.0
MMD3_k127_997178_30 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000003759 164.0
MMD3_k127_997178_31 light absorption K06893 - - 0.00000000000000000000000000008007 121.0
MMD3_k127_997178_32 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000025 124.0
MMD3_k127_997178_34 CBS domain K03699 - - 0.00000000000000000000008126 100.0
MMD3_k127_997178_35 Protein of unknown function (DUF1648) - - - 0.00000000000000000003897 96.0
MMD3_k127_997178_36 Nodulation protein S (NodS) - - - 0.0000000000000000001033 93.0
MMD3_k127_997178_37 phosphorelay signal transduction system - - - 0.000000000001435 77.0
MMD3_k127_997178_38 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000357 66.0
MMD3_k127_997178_39 AMP binding - - - 0.0000000003799 67.0
MMD3_k127_997178_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 610.0
MMD3_k127_997178_40 PBS lyase HEAT-like repeat K02288,K02631 - 4.4.1.31,4.4.1.32 0.000001581 57.0
MMD3_k127_997178_41 Anaphase-promoting complex subunit Apc8 K03355 GO:0000151,GO:0000152,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0016567,GO:0019538,GO:0019941,GO:0030071,GO:0030163,GO:0030332,GO:0031145,GO:0031331,GO:0031461,GO:0032270,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070647,GO:0071704,GO:0090068,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905818,GO:1905820,GO:1990234,GO:2001252 - 0.0000375 54.0
MMD3_k127_997178_5 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 557.0
MMD3_k127_997178_6 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 533.0
MMD3_k127_997178_7 Beta Propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 519.0
MMD3_k127_997178_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 511.0
MMD3_k127_997178_9 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 444.0