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Overview

ID MAG02382
Name MMD3_bin.14
Sample SMP0060
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Terriglobia
Order Terriglobales
Family Gp1-AA117
Genus Angelobacter
Species
Assembly information
Completeness (%) 69.01
Contamination (%) 2.95
GC content (%) 60.0
N50 (bp) 3,308
Genome size (bp) 2,831,334

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2778

Gene name Description KEGG GOs EC E-value Score Sequence
MMD3_k127_1002164_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 327.0
MMD3_k127_1002164_1 PFAM Appr-1-p processing - - - 0.0000000000000000000000000000000000000000000000001865 183.0
MMD3_k127_1006263_0 - - - - 0.000000000000000000000000000000000000000000000000000000003857 211.0
MMD3_k127_1006263_1 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000004265 192.0
MMD3_k127_1006263_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000006826 147.0
MMD3_k127_1008720_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 581.0
MMD3_k127_1008720_1 protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 311.0
MMD3_k127_1011074_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.559e-247 771.0
MMD3_k127_1011074_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
MMD3_k127_1012942_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.158e-207 657.0
MMD3_k127_1012942_1 Domain of unknown function (DUF3488) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 317.0
MMD3_k127_1012942_2 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000002274 182.0
MMD3_k127_1019467_0 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007329 276.0
MMD3_k127_1019467_1 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000004134 237.0
MMD3_k127_1025704_0 gluconolactonase activity K01053,K13735 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009269 431.0
MMD3_k127_1025704_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 356.0
MMD3_k127_1025704_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003991 267.0
MMD3_k127_1025704_3 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000002913 184.0
MMD3_k127_1030209_0 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 491.0
MMD3_k127_1030209_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 330.0
MMD3_k127_1030209_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000007224 119.0
MMD3_k127_1032197_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.664e-250 781.0
MMD3_k127_1032197_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004948 252.0
MMD3_k127_1032197_2 - - - - 0.0000000000000000000000000000000000000000000000000009869 190.0
MMD3_k127_1032197_3 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000002028 169.0
MMD3_k127_1032197_4 Tetratricopeptide repeat - - - 0.000000000000000000222 92.0
MMD3_k127_1034848_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 541.0
MMD3_k127_1034848_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 436.0
MMD3_k127_1034848_2 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 382.0
MMD3_k127_1034848_3 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008758 312.0
MMD3_k127_1034848_4 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000009155 151.0
MMD3_k127_1042344_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0005371 47.0
MMD3_k127_1042344_1 Sigma-70 region 2 - - - 0.0009868 47.0
MMD3_k127_1044319_1 Alpha/beta hydrolase family K18053 - 1.13.12.5 0.00000000000000000000000000000000000000000000002336 175.0
MMD3_k127_1044319_2 MbtH-like protein K05375,K09190 - - 0.000000000000000000000000000000001964 130.0
MMD3_k127_1044319_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000003202 60.0
MMD3_k127_1044319_4 - - - - 0.00000001015 64.0
MMD3_k127_1044926_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 495.0
MMD3_k127_1044926_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000007049 182.0
MMD3_k127_1044926_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000009151 141.0
MMD3_k127_1060946_0 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997 600.0
MMD3_k127_1060946_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 366.0
MMD3_k127_1060946_2 Protein of unknown function (DUF3037) - - - 0.000000000000000000000000000000000000000000000000000000000000000002168 235.0
MMD3_k127_1060946_3 phosphatase - - - 0.0000000000000000000000000000000000000000000000001007 198.0
MMD3_k127_1070463_0 PFAM peptidase M13 K01415 - 3.4.24.71 4.817e-250 789.0
MMD3_k127_1070463_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000003604 219.0
MMD3_k127_10740_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000168 284.0
MMD3_k127_10740_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000007702 218.0
MMD3_k127_10740_2 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000554 163.0
MMD3_k127_1076963_0 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000001689 153.0
MMD3_k127_1089259_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 494.0
MMD3_k127_1089259_1 Coenzyme A transferase K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 382.0
MMD3_k127_1089259_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0009222 42.0
MMD3_k127_1103171_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 560.0
MMD3_k127_1103171_1 - - - - 0.0000000000000000000000000000000002057 134.0
MMD3_k127_1103171_2 - - - - 0.000000000000000000000000002267 111.0
MMD3_k127_1103171_3 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000001255 63.0
MMD3_k127_1115620_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 309.0
MMD3_k127_1115620_1 protein-glutamate methylesterase activity K03412,K03413 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000001885 235.0
MMD3_k127_1115620_2 Chemotaxis phosphatase CheX K03409 - - 0.0000000000000000000000000000000000000000000000000000000000000000006444 231.0
MMD3_k127_1115620_3 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000001783 102.0
MMD3_k127_1122439_0 SMART band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 345.0
MMD3_k127_1122439_1 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009668 241.0
MMD3_k127_1122439_2 Sporulation related domain - - - 0.0000000000000000000000000002131 121.0
MMD3_k127_1122706_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 7.696e-268 830.0
MMD3_k127_1122706_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 8.277e-219 686.0
MMD3_k127_1122706_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 572.0
MMD3_k127_1122706_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000002547 187.0
MMD3_k127_112431_0 PFAM Cytochrome c assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 349.0
MMD3_k127_112431_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008087 267.0
MMD3_k127_112431_2 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000000005265 152.0
MMD3_k127_112431_3 subunit of a heme lyase K02200 - - 0.00000000000000000000000002395 117.0
MMD3_k127_112431_4 - - - - 0.000000000000000003183 87.0
MMD3_k127_1130373_0 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001624 152.0
MMD3_k127_1133660_0 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000001336 147.0
MMD3_k127_1133660_1 - - - - 0.0000000000000000005891 92.0
MMD3_k127_1134999_0 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 515.0
MMD3_k127_1134999_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 465.0
MMD3_k127_1135541_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 461.0
MMD3_k127_1135541_1 Multidrug Resistance protein K12962 - - 0.00000000000001055 76.0
MMD3_k127_1135541_2 Domain of unknown function (DUF3473) - - - 0.000000000005268 69.0
MMD3_k127_1135541_3 membrane K08978,K12962 - - 0.0000000028 63.0
MMD3_k127_1137233_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001161 248.0
MMD3_k127_1137233_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000868 159.0
MMD3_k127_1137233_2 RmlD substrate binding domain K00067 - 1.1.1.133 0.00000000000000000000000000000008316 128.0
MMD3_k127_1137233_3 Domain of unknown function (DUF1972) K12996 - - 0.00000000000000000000000003426 112.0
MMD3_k127_1137233_4 RmlD substrate binding domain K00067 - 1.1.1.133 0.000000000000000000000003576 106.0
MMD3_k127_1147589_0 Protein of unknown function (DUF1343) - - - 1.412e-288 907.0
MMD3_k127_1147589_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 422.0
MMD3_k127_1147589_2 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000258 228.0
MMD3_k127_1160653_0 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000007106 208.0
MMD3_k127_1160653_1 - - - - 0.00000001056 61.0
MMD3_k127_1174087_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 500.0
MMD3_k127_1174087_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 428.0
MMD3_k127_1174087_2 Lysophospholipase L1 and related esterases - - - 0.0000000000000000000000000000000000000000000000000000000002361 211.0
MMD3_k127_1174087_3 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000313 190.0
MMD3_k127_1174087_4 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000001597 174.0
MMD3_k127_1174087_5 - - - - 0.0000000000000000000000000000000000000000005176 170.0
MMD3_k127_1174087_6 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000001622 106.0
MMD3_k127_1174087_7 - - - - 0.0000000005755 66.0
MMD3_k127_1178460_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01584 - 4.1.1.19 6.04e-321 999.0
MMD3_k127_1178460_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000469 265.0
MMD3_k127_1185396_0 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 501.0
MMD3_k127_1185396_1 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 488.0
MMD3_k127_1185396_2 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001676 284.0
MMD3_k127_1185396_3 trehalose biosynthetic process K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000005474 176.0
MMD3_k127_1185396_4 transmembrane transport - - - 0.00000000000000000000000000000003581 134.0
MMD3_k127_1185396_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000002274 107.0
MMD3_k127_1185396_6 cheY-homologous receiver domain - - - 0.00000000000000001407 83.0
MMD3_k127_1185396_7 - - - - 0.00000000000001725 78.0
MMD3_k127_1185396_8 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0004084 48.0
MMD3_k127_1190969_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388,K12527 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6,1.97.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 342.0
MMD3_k127_1190969_1 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000001863 227.0
MMD3_k127_1190969_2 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000003631 123.0
MMD3_k127_1191601_0 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 382.0
MMD3_k127_1191601_1 ZIP Zinc transporter K07238,K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 318.0
MMD3_k127_1191601_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 293.0
MMD3_k127_1194844_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 321.0
MMD3_k127_1194844_1 Sporulation and spore germination - - - 0.00000000000000000000000000000003709 134.0
MMD3_k127_1194844_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000003927 114.0
MMD3_k127_1194844_3 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000698 103.0
MMD3_k127_1198556_0 Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 614.0
MMD3_k127_1199262_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 433.0
MMD3_k127_1199262_1 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000352 160.0
MMD3_k127_1199262_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000002147 84.0
MMD3_k127_1204857_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 319.0
MMD3_k127_1204933_0 PFAM ABC transporter transmembrane K06147 - - 2.132e-255 799.0
MMD3_k127_1204933_1 glutamine synthetase K01915 - 6.3.1.2 3.283e-254 790.0
MMD3_k127_1204933_2 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 310.0
MMD3_k127_1204933_3 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009143 292.0
MMD3_k127_1204933_4 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003246 254.0
MMD3_k127_1204933_5 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000005705 98.0
MMD3_k127_1204933_6 Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000007993 60.0
MMD3_k127_1208507_0 PFAM peptidase M61 - - - 5.316e-212 677.0
MMD3_k127_1208507_1 GlcNAc-PI de-N-acetylase K22135 - - 0.000000000000000003509 87.0
MMD3_k127_1215969_0 PFAM natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 543.0
MMD3_k127_1215969_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 341.0
MMD3_k127_1215969_2 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004789 272.0
MMD3_k127_1215969_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000002378 164.0
MMD3_k127_1215969_4 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000003343 162.0
MMD3_k127_1215969_5 Periplasmic binding protein K02016 - - 0.000000000000000000000000003337 112.0
MMD3_k127_1227348_0 Glycosyltransferase family 87 - - - 0.000000000003826 78.0
MMD3_k127_1228406_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 467.0
MMD3_k127_1228406_1 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003849 282.0
MMD3_k127_1228406_2 transferase activity, transferring glycosyl groups K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000008918 214.0
MMD3_k127_1228406_3 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000000000000000000000000000000104 165.0
MMD3_k127_1229847_0 Glycosyl hydrolase family 47 K01230,K10085 - 3.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 552.0
MMD3_k127_1229847_1 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 395.0
MMD3_k127_1229847_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K19270 - 3.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000166 221.0
MMD3_k127_1229847_3 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000000000000000000000007657 201.0
MMD3_k127_1229847_4 - - - - 0.00000000000000000000000000000004528 132.0
MMD3_k127_1232493_0 Belongs to the beta-ketoacyl-ACP synthases family K14660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 473.0
MMD3_k127_1235624_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K17217 - 2.5.1.48,4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 553.0
MMD3_k127_1235624_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004096 279.0
MMD3_k127_1237664_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 370.0
MMD3_k127_1237664_1 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000002192 168.0
MMD3_k127_1237664_2 ABC transporter, transmembrane K18890 - - 0.00000000000000000000000000000000000000000958 154.0
MMD3_k127_1237664_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000002022 130.0
MMD3_k127_1239190_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K15372 - 2.6.1.19,2.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 393.0
MMD3_k127_1239190_1 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000005325 158.0
MMD3_k127_1239190_2 AhpC/TSA antioxidant enzyme - - - 0.0000000000351 68.0
MMD3_k127_1239190_3 AhpC/TSA antioxidant enzyme - - - 0.0001134 46.0
MMD3_k127_1245786_0 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 295.0
MMD3_k127_1245786_1 PFAM tRNA rRNA methyltransferase, SpoU K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000225 277.0
MMD3_k127_1245786_2 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000001975 217.0
MMD3_k127_1245786_3 ABC 3 transport family K09819,K11606,K11708,K11709 - - 0.0000000000000000000000004215 110.0
MMD3_k127_1245786_4 Animal haem peroxidase - - - 0.00008235 46.0
MMD3_k127_125490_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1139.0
MMD3_k127_125490_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000002909 160.0
MMD3_k127_1256976_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000001162 204.0
MMD3_k127_1256976_1 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000005235 168.0
MMD3_k127_125785_0 NHLM bacteriocin system ABC transporter, peptidase ATP-binding protein - - - 0.00000000000000000000000000000000000000000000374 166.0
MMD3_k127_125785_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000006486 124.0
MMD3_k127_125785_2 HlyD family secretion protein - - - 0.00000000000000321 83.0
MMD3_k127_1260412_0 Protein kinase domain K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000005209 225.0
MMD3_k127_1260412_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000002438 168.0
MMD3_k127_1261795_0 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 410.0
MMD3_k127_1261795_1 - - - - 0.000000000000000000000000000000003224 138.0
MMD3_k127_126201_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K04108 - 1.3.7.9 1.579e-195 633.0
MMD3_k127_1269947_0 Permease family K06901 - - 5.197e-199 628.0
MMD3_k127_1269947_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 434.0
MMD3_k127_1269947_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 296.0
MMD3_k127_1269947_3 aminopeptidase activity - - - 0.0000000000000000000000000000000001484 143.0
MMD3_k127_1274433_0 Peptidase S9, prolyl oligopeptidase active site domain protein K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 537.0
MMD3_k127_1274433_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 504.0
MMD3_k127_1274433_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000000000008123 188.0
MMD3_k127_1276681_0 - - - - 0.00000000000000002917 83.0
MMD3_k127_1276681_1 Peptidase family M48 - - - 0.0004132 43.0
MMD3_k127_1280444_0 Transcriptional regulator, LysR K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 320.0
MMD3_k127_1280444_1 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.00000000000000000000000000000000000000000000000000000000000001119 218.0
MMD3_k127_1280444_3 positive regulation of translation, ncRNA-mediated K03666 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.00000000006735 67.0
MMD3_k127_1286250_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002756 267.0
MMD3_k127_1286250_1 Molybdopterin oxidoreductase K00370,K17050 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000006529 230.0
MMD3_k127_1286250_2 PFAM Cytochrome b b6 domain - - - 0.00000000000000000000000000000000000000000000004142 172.0
MMD3_k127_1288947_0 Polymorphic membrane protein, Chlamydia - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 326.0
MMD3_k127_1288947_1 - - - - 0.0005437 49.0
MMD3_k127_1301581_0 - - - - 0.0000000000000000000004673 107.0
MMD3_k127_1304074_0 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
MMD3_k127_1304074_1 Protein of unknown function with PCYCGC motif - - - 0.000000000000000000000000000003971 127.0
MMD3_k127_130730_0 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 383.0
MMD3_k127_1325962_0 CoA-binding K09181 - - 1.262e-296 928.0
MMD3_k127_1335682_0 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 459.0
MMD3_k127_1335682_1 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 423.0
MMD3_k127_1335682_2 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 330.0
MMD3_k127_1335682_3 - K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002236 274.0
MMD3_k127_1335682_4 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000002113 237.0
MMD3_k127_1335682_5 N-acetyltransferase K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000002734 207.0
MMD3_k127_1335682_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000009556 156.0
MMD3_k127_1335682_7 - - - - 0.00001205 55.0
MMD3_k127_1337072_0 PFAM peptidase M13 K01415 - 3.4.24.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 534.0
MMD3_k127_1337072_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 503.0
MMD3_k127_1337072_2 peptidase K01415,K07386 - 3.4.24.71 0.00000000000000000000000000000000000000000000000000000000000000000000000005014 251.0
MMD3_k127_1341046_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 558.0
MMD3_k127_1342739_0 - - - - 0.000000000000000000000000000000000000000000000000000000000002162 214.0
MMD3_k127_1342739_1 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000002879 153.0
MMD3_k127_1351083_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 419.0
MMD3_k127_1351083_1 alcohol dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 386.0
MMD3_k127_1355515_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.63e-237 741.0
MMD3_k127_1355515_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 512.0
MMD3_k127_1355515_2 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001628 269.0
MMD3_k127_1355515_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.1.1.63 0.000000000000000000000000000000000000000000004946 169.0
MMD3_k127_1356629_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.043e-309 957.0
MMD3_k127_1356629_1 - - - - 0.000000000000000000005054 97.0
MMD3_k127_1361824_0 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000002083 268.0
MMD3_k127_1361824_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000369 46.0
MMD3_k127_1366070_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 2.017e-196 625.0
MMD3_k127_1366070_1 Belongs to the GSP D family K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009343 401.0
MMD3_k127_1366070_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007266 249.0
MMD3_k127_1366070_3 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000006978 218.0
MMD3_k127_1384265_0 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000003335 217.0
MMD3_k127_1384265_1 Rhomboid K19225 - 3.4.21.105 0.000000000000000000000000000000000000000002987 169.0
MMD3_k127_1384853_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 313.0
MMD3_k127_1396790_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 2.05e-214 678.0
MMD3_k127_1396790_1 MacB-like periplasmic core domain - - - 0.0000000003311 63.0
MMD3_k127_1403874_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000008529 172.0
MMD3_k127_1403874_1 Penicillinase repressor - - - 0.00000000000000000000006992 103.0
MMD3_k127_1403874_2 Belongs to the peptidase M48B family - - - 0.000000000000001776 86.0
MMD3_k127_1403945_0 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000005677 231.0
MMD3_k127_1403945_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000003586 161.0
MMD3_k127_1407649_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.593e-206 653.0
MMD3_k127_1407649_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000002634 127.0
MMD3_k127_141243_0 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 296.0
MMD3_k127_141243_1 2'-5' RNA ligase superfamily K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000006192 188.0
MMD3_k127_141243_2 Endonuclease containing a URI domain K07461 - - 0.000000000007473 67.0
MMD3_k127_1427672_0 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 509.0
MMD3_k127_1427672_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009226 300.0
MMD3_k127_1427672_2 - - - - 0.000000000000000000000000000000000000000000000000000000000003176 227.0
MMD3_k127_143103_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 532.0
MMD3_k127_143103_1 Formate dehydrogenase N, transmembrane K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 481.0
MMD3_k127_143103_2 NnrS protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 409.0
MMD3_k127_143103_3 Cytochrome b/b6/petB K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000204 224.0
MMD3_k127_143103_4 protein involved in formate dehydrogenase formation K02380 - - 0.000000000000000000000000000000000000000000000000000000001225 209.0
MMD3_k127_143103_5 synthetase (ADP forming), alpha K09181 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0032459,GO:0032462,GO:0034212,GO:0036211,GO:0043170,GO:0043254,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052858,GO:0061733,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:1901564 - 0.000000000000000000000000000001699 124.0
MMD3_k127_143103_6 Short repeat of unknown function (DUF308) - - - 0.00000000006015 72.0
MMD3_k127_1436950_0 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 505.0
MMD3_k127_1436950_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000002711 218.0
MMD3_k127_1436950_2 - - - - 0.000000000000000000000000000000000000000000001669 175.0
MMD3_k127_1437454_0 phosphorelay signal transduction system K07712,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 584.0
MMD3_k127_1437454_1 protein histidine kinase activity K03407,K07678 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 439.0
MMD3_k127_1437454_2 Response regulator, receiver K11443 - - 0.000000000000000000000000000001351 124.0
MMD3_k127_1437454_3 cyclic nucleotide-binding K10914 - - 0.00000000000001293 77.0
MMD3_k127_1437781_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 489.0
MMD3_k127_1439978_0 PFAM Aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 481.0
MMD3_k127_1439978_1 NAD(P) transhydrogenase beta subunit K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 464.0
MMD3_k127_1439978_2 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 373.0
MMD3_k127_1439978_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000000000001307 130.0
MMD3_k127_1439978_4 - - - - 0.000000000000000000000000001648 119.0
MMD3_k127_144030_0 Carbon starvation protein CstA K06200 - - 0.00000000000000000000000000000000000000000000000000004222 191.0
MMD3_k127_144030_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000102 184.0
MMD3_k127_144030_2 Membrane - - - 0.00000000000000000000000000000000000000056 151.0
MMD3_k127_144030_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000003856 141.0
MMD3_k127_144030_4 Large extracellular alpha-helical protein - - - 0.000000000000000006679 89.0
MMD3_k127_1446456_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 330.0
MMD3_k127_1447842_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 514.0
MMD3_k127_1447842_1 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 375.0
MMD3_k127_1447842_2 NADH flavin K09461 - 1.14.13.40 0.000000000000000000000000000000000000000000001506 169.0
MMD3_k127_1465069_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000257 224.0
MMD3_k127_1465069_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000001625 220.0
MMD3_k127_1465069_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000006109 64.0
MMD3_k127_1473015_0 lipoprotein localization to outer membrane K02004,K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 436.0
MMD3_k127_1473015_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 301.0
MMD3_k127_1473015_2 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001505 257.0
MMD3_k127_1473015_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003307 250.0
MMD3_k127_1473015_4 Vitamin K epoxide reductase - - - 0.00000000000000000000000000000000001788 139.0
MMD3_k127_1474488_0 Thioesterase superfamily - - - 0.00000000000000000000000000000000000125 148.0
MMD3_k127_1474488_1 methyltransferase - - - 0.0000000000000000000000000000000002339 139.0
MMD3_k127_1474488_2 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000004713 88.0
MMD3_k127_1484674_0 Flotillin K07192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 341.0
MMD3_k127_1484674_1 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
MMD3_k127_1484674_2 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000005284 119.0
MMD3_k127_1488359_0 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 439.0
MMD3_k127_1488359_1 formate dehydrogenase K03620 - - 0.000000000007102 69.0
MMD3_k127_1493594_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001624 270.0
MMD3_k127_1493594_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000167 154.0
MMD3_k127_1498792_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 581.0
MMD3_k127_1498792_1 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000003891 151.0
MMD3_k127_1498792_2 MacB-like periplasmic core domain - - - 0.00000000009947 63.0
MMD3_k127_150233_0 YdjC-like protein - - - 0.000000000000000000000000000000000000000000000003189 178.0
MMD3_k127_150233_1 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000005374 127.0
MMD3_k127_1504902_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 417.0
MMD3_k127_1504902_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 310.0
MMD3_k127_1504902_2 DoxX K16937 - 1.8.5.2 0.0000000000000001275 87.0
MMD3_k127_1515727_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.934e-260 808.0
MMD3_k127_1515727_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008158 254.0
MMD3_k127_1515727_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000226 147.0
MMD3_k127_1520872_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 516.0
MMD3_k127_1520872_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000007122 197.0
MMD3_k127_1520872_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000002346 93.0
MMD3_k127_1528562_0 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000003867 203.0
MMD3_k127_1528562_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000009143 80.0
MMD3_k127_1532395_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 415.0
MMD3_k127_1532395_1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 331.0
MMD3_k127_1532395_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000002066 112.0
MMD3_k127_1540543_0 Transcriptional regulatory protein, C terminal K02483,K07657 - - 0.00000000000000000000000000000000000000000000000000000001052 202.0
MMD3_k127_1540543_1 peptidase - - - 0.000000000000000000000000000000000000000000000004138 188.0
MMD3_k127_1547295_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001321 262.0
MMD3_k127_1547295_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004473 265.0
MMD3_k127_1547295_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000004584 111.0
MMD3_k127_1547295_3 - - - - 0.0000000000000002263 92.0
MMD3_k127_1547295_4 MacB-like periplasmic core domain - - - 0.000000000000005759 76.0
MMD3_k127_1547295_6 oxidoreductase activity - - - 0.00001903 49.0
MMD3_k127_1553655_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 619.0
MMD3_k127_1553655_1 Cupin 2, conserved barrel domain protein - - - 0.00003024 47.0
MMD3_k127_1558469_0 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009101 352.0
MMD3_k127_1558469_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 331.0
MMD3_k127_1558469_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 291.0
MMD3_k127_1558469_3 Belongs to the peptidase S8 family - - - 0.0000000000000000000008065 111.0
MMD3_k127_1558469_4 DUF218 domain - - - 0.0001865 51.0
MMD3_k127_1569148_0 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 410.0
MMD3_k127_1569148_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 368.0
MMD3_k127_1569148_2 geranylgeranyl reductase - - - 0.0000000000000000000000000000000531 128.0
MMD3_k127_1573002_0 Amidohydrolase family - - - 2.204e-201 636.0
MMD3_k127_1573170_0 RIO1 family K01090,K12132 - 2.7.11.1,3.1.3.16 0.000000000000000000000000000000002271 139.0
MMD3_k127_1573170_1 - - - - 0.0000000000000005187 82.0
MMD3_k127_1573541_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000001009 270.0
MMD3_k127_1573541_1 CHAD - - - 0.0000000000003696 79.0
MMD3_k127_1573603_0 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005897 281.0
MMD3_k127_1573603_1 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000003207 190.0
MMD3_k127_1586384_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 537.0
MMD3_k127_1586384_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 409.0
MMD3_k127_1586384_2 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000003379 207.0
MMD3_k127_1586384_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000002958 110.0
MMD3_k127_1586623_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 448.0
MMD3_k127_1592785_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 539.0
MMD3_k127_1592785_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 434.0
MMD3_k127_1592785_2 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000002115 128.0
MMD3_k127_159901_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005235 278.0
MMD3_k127_1608716_0 L-lactate permease K03303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 562.0
MMD3_k127_1608716_1 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 411.0
MMD3_k127_1608716_2 Binding-protein-dependent transport system inner membrane component K02025,K05814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 399.0
MMD3_k127_1608716_3 Belongs to the ABC transporter superfamily - - - 0.00000000000000001838 85.0
MMD3_k127_1608716_4 Recombinase zinc beta ribbon domain - - - 0.0002689 46.0
MMD3_k127_1618735_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.169e-212 665.0
MMD3_k127_1618735_1 - - - - 0.000000000000000000000000000000000000000000001924 170.0
MMD3_k127_1621139_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.924e-278 863.0
MMD3_k127_1621139_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000001503 126.0
MMD3_k127_1624835_0 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 613.0
MMD3_k127_1624835_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 458.0
MMD3_k127_1639258_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 347.0
MMD3_k127_1639258_1 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000001046 183.0
MMD3_k127_1639258_2 GlcNAc-PI de-N-acetylase K22135 - - 0.0000000000000000000000000000000000000000000000002601 181.0
MMD3_k127_1640640_0 Signal transducing histidine kinase, homodimeric domain K02487,K03407,K06596 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 494.0
MMD3_k127_1640640_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000003578 158.0
MMD3_k127_1645246_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 284.0
MMD3_k127_1664933_0 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 492.0
MMD3_k127_1664933_1 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 430.0
MMD3_k127_1664933_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000002021 246.0
MMD3_k127_1664933_3 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000003598 218.0
MMD3_k127_1673569_0 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000002477 227.0
MMD3_k127_1673569_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000005886 176.0
MMD3_k127_1673569_2 Membrane protein implicated in regulation of membrane protease activity - - - 0.0002197 47.0
MMD3_k127_1673942_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1215.0
MMD3_k127_1673942_1 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 297.0
MMD3_k127_1673942_2 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000006826 104.0
MMD3_k127_1673942_3 - - - - 0.0000000000002768 75.0
MMD3_k127_1687018_0 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000817 184.0
MMD3_k127_1687018_1 deacetylase - - - 0.00000000172 60.0
MMD3_k127_1687327_0 Elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 537.0
MMD3_k127_1687327_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 443.0
MMD3_k127_1690221_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 498.0
MMD3_k127_1690221_1 Thermolysin metallopeptidase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001561 250.0
MMD3_k127_1690221_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000002273 98.0
MMD3_k127_1698416_0 Response regulator receiver - - - 2.531e-213 670.0
MMD3_k127_1698416_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009762 443.0
MMD3_k127_1698416_2 - - - - 0.00000000000000000000000000000000000000000000000009398 181.0
MMD3_k127_1698416_3 ABC-type antimicrobial peptide transport system, permease component - - - 0.0000000000000000000000000000000000000000000003149 174.0
MMD3_k127_1699703_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 504.0
MMD3_k127_1702639_0 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 533.0
MMD3_k127_1702639_1 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 333.0
MMD3_k127_1706262_0 Thioesterase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 395.0
MMD3_k127_1706262_1 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009596 276.0
MMD3_k127_1706262_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000003675 228.0
MMD3_k127_1707329_0 HD domain - - - 2.85e-236 749.0
MMD3_k127_1707329_1 Nucleic acid binding K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 482.0
MMD3_k127_1715783_0 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 492.0
MMD3_k127_1715783_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003514 273.0
MMD3_k127_1721736_0 FAD linked oxidases, C-terminal domain K06911 - - 8.179e-287 895.0
MMD3_k127_1721736_1 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007004 262.0
MMD3_k127_1726605_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 298.0
MMD3_k127_1726605_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000004069 154.0
MMD3_k127_1728326_0 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006181 234.0
MMD3_k127_1728326_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000005567 130.0
MMD3_k127_1728326_3 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.000000000000001175 83.0
MMD3_k127_1736551_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000781 277.0
MMD3_k127_1736551_1 FMN-dependent dehydrogenase K16422 - 1.1.3.46 0.00000000000000000000000000000000000001122 150.0
MMD3_k127_1738989_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 314.0
MMD3_k127_1738989_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000004924 204.0
MMD3_k127_1738989_2 PFAM peptidase - - - 0.00000000000000011 82.0
MMD3_k127_1741654_0 COG3209 Rhs family protein - - - 1.477e-234 742.0
MMD3_k127_1741654_1 SpoIVB peptidase S55 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 542.0
MMD3_k127_174598_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 493.0
MMD3_k127_174598_1 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001407 240.0
MMD3_k127_1746299_0 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 304.0
MMD3_k127_1746299_1 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000001576 247.0
MMD3_k127_1746299_2 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000000000000005701 143.0
MMD3_k127_1759820_0 Histidine kinase K02482,K03557 - 2.7.13.3 6.255e-299 954.0
MMD3_k127_1759820_1 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 569.0
MMD3_k127_1759820_2 Glucose inhibited division protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008573 270.0
MMD3_k127_1759820_3 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000004979 121.0
MMD3_k127_1762607_0 Selenocysteine synthase N terminal K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 529.0
MMD3_k127_1765958_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 583.0
MMD3_k127_1765958_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 306.0
MMD3_k127_1765958_2 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000000002314 212.0
MMD3_k127_1765958_3 aminopeptidase activity K07004 - - 0.00000000000000000000000000000000000000000000003577 193.0
MMD3_k127_1765958_4 Domain of unknown function (DUF4440) - - - 0.00008575 52.0
MMD3_k127_1769558_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 387.0
MMD3_k127_1769558_1 - - - - 0.00001637 55.0
MMD3_k127_1773548_0 Oligopeptide transporter OPT - - - 7.626e-299 932.0
MMD3_k127_1773548_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000001742 80.0
MMD3_k127_1777336_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 406.0
MMD3_k127_1778592_0 lipopolysaccharide transport K09774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 519.0
MMD3_k127_1778592_1 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 404.0
MMD3_k127_1779962_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 514.0
MMD3_k127_1779962_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000002264 189.0
MMD3_k127_1779962_2 Photosynthetic reaction centre cytochrome C subunit - - - 0.0000000000005588 74.0
MMD3_k127_1783301_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 538.0
MMD3_k127_1793929_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.608e-207 658.0
MMD3_k127_1793929_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 527.0
MMD3_k127_1793929_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 495.0
MMD3_k127_1793929_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 359.0
MMD3_k127_1793929_4 ACT domain K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 363.0
MMD3_k127_1793929_5 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 315.0
MMD3_k127_1793929_6 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000002275 192.0
MMD3_k127_1793929_7 energy transducer activity K03832 - - 0.000000000000000000008876 100.0
MMD3_k127_1795512_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005798 249.0
MMD3_k127_1795528_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 342.0
MMD3_k127_1795528_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000003614 102.0
MMD3_k127_1797810_0 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 474.0
MMD3_k127_1797810_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
MMD3_k127_1797810_2 - - - - 0.00000000000006836 74.0
MMD3_k127_1797810_3 - - - - 0.000000000003006 71.0
MMD3_k127_1812007_0 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 571.0
MMD3_k127_1812007_1 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000004366 197.0
MMD3_k127_1813163_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003925 276.0
MMD3_k127_1813163_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009738 239.0
MMD3_k127_1818640_0 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 392.0
MMD3_k127_1818640_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001211 274.0
MMD3_k127_1818640_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004312 265.0
MMD3_k127_1818640_3 GGDEF domain - - - 0.0000000004205 70.0
MMD3_k127_182559_0 Abhydrolase domain containing 18 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 440.0
MMD3_k127_182559_1 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001753 276.0
MMD3_k127_182559_2 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000006778 167.0
MMD3_k127_182559_3 - - - - 0.0000000000000000000000000002941 121.0
MMD3_k127_1826963_0 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 367.0
MMD3_k127_1826963_1 EthD domain - - - 0.0000000000000000000000000000000000000000006446 160.0
MMD3_k127_1828321_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00615,K00616,K13810 - 2.2.1.1,2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 457.0
MMD3_k127_1828321_1 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.000000000000000000000000000000000008741 141.0
MMD3_k127_1831582_0 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 351.0
MMD3_k127_1831582_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000335 194.0
MMD3_k127_1831582_2 EamA-like transporter family - - - 0.000000000000000000000000000004973 131.0
MMD3_k127_1859243_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 1.094e-214 676.0
MMD3_k127_1859243_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 375.0
MMD3_k127_1859243_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 293.0
MMD3_k127_1859243_3 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000002069 155.0
MMD3_k127_1859243_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00002848 47.0
MMD3_k127_1868320_0 Malate synthase K01638 - 2.3.3.9 1.065e-206 649.0
MMD3_k127_1869108_0 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 336.0
MMD3_k127_1869108_1 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006452 234.0
MMD3_k127_1869108_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000587 218.0
MMD3_k127_1869108_3 PFAM Uncharacterised protein family UPF0126 - - - 0.000000000000000000000000000001886 123.0
MMD3_k127_1869108_4 Endonuclease containing a URI domain K07461 - - 0.00000000000000000000000001023 116.0
MMD3_k127_1869108_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.0000000000000003392 84.0
MMD3_k127_1871166_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 356.0
MMD3_k127_1871166_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000002705 176.0
MMD3_k127_1871166_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000003869 112.0
MMD3_k127_1871166_4 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000001682 103.0
MMD3_k127_1871166_6 Putative adhesin - - - 0.00002264 56.0
MMD3_k127_1874250_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 431.0
MMD3_k127_1874250_1 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000000000000000000000005541 154.0
MMD3_k127_1874250_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000003075 128.0
MMD3_k127_1874646_0 PFAM Cytochrome b b6 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 404.0
MMD3_k127_1874646_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000002153 144.0
MMD3_k127_1874646_2 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000000000593 134.0
MMD3_k127_1874754_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 497.0
MMD3_k127_1874754_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007136 281.0
MMD3_k127_1874754_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000003226 135.0
MMD3_k127_1874808_0 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 402.0
MMD3_k127_1876531_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 1.406e-212 670.0
MMD3_k127_1876531_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 315.0
MMD3_k127_1876531_2 OmpA-like transmembrane domain K16079 - - 0.00000000000000000000000000000000000000000000000000000000003977 215.0
MMD3_k127_1876531_3 OmpA-like transmembrane domain K16079 - - 0.00000000001293 71.0
MMD3_k127_1890915_0 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009203 262.0
MMD3_k127_1890915_1 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000006674 221.0
MMD3_k127_1890915_2 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000742 214.0
MMD3_k127_1890915_3 peroxiredoxin activity K03386 - 1.11.1.15 0.00000000000000000000000000000000000009066 144.0
MMD3_k127_1890915_4 PFAM TonB-dependent Receptor - - - 0.00000000000000000001759 101.0
MMD3_k127_1890915_5 AhpC/TSA family - - - 0.000000001843 59.0
MMD3_k127_1894835_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009982 256.0
MMD3_k127_1894835_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000002464 123.0
MMD3_k127_1895407_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 522.0
MMD3_k127_1895407_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000005839 231.0
MMD3_k127_1895407_2 Polysaccharide lyase family 4, domain II - - - 0.00000000000000000000000000000000000000000000000000000000000005552 222.0
MMD3_k127_1901756_0 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000002441 241.0
MMD3_k127_1904831_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 533.0
MMD3_k127_1904831_1 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000001431 224.0
MMD3_k127_190610_0 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 351.0
MMD3_k127_190610_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000008162 257.0
MMD3_k127_190610_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000007815 221.0
MMD3_k127_190610_3 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000002599 210.0
MMD3_k127_190610_4 NUDIX domain - - - 0.0000000000000000000000000000000000000000002366 165.0
MMD3_k127_1907696_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.981e-234 732.0
MMD3_k127_1907696_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.386e-211 661.0
MMD3_k127_1907696_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 482.0
MMD3_k127_1907696_3 Helix-turn-helix domain K15539 - - 0.00000000000000000000000000002037 128.0
MMD3_k127_1907696_4 Hep Hag repeat protein K07278,K21449 - - 0.00000000000000000000000001806 122.0
MMD3_k127_190804_0 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 326.0
MMD3_k127_190804_1 Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 304.0
MMD3_k127_191084_0 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000004207 130.0
MMD3_k127_191084_1 - - - - 0.0000000000000001682 89.0
MMD3_k127_1914176_0 Vault protein inter-alpha-trypsin domain K07114 - - 1.532e-256 813.0
MMD3_k127_1914176_1 - K19693 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 435.0
MMD3_k127_1914432_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 583.0
MMD3_k127_1914432_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000618 213.0
MMD3_k127_1914831_0 Membrane K06384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007911 265.0
MMD3_k127_1914831_1 RDD family - - - 0.00000000000000000000000000000000000000000000000152 184.0
MMD3_k127_1919063_0 Amino acid permease - - - 1.755e-315 983.0
MMD3_k127_1919063_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 543.0
MMD3_k127_1919063_2 response regulator, receiver K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009318 246.0
MMD3_k127_1919063_3 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000002255 230.0
MMD3_k127_1919063_4 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000000000000000000000002714 105.0
MMD3_k127_1919403_0 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 505.0
MMD3_k127_1919403_1 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 470.0
MMD3_k127_1919403_2 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003543 276.0
MMD3_k127_1919403_3 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000001522 179.0
MMD3_k127_192863_0 Protein of unknown function (DUF1800) - - - 1.462e-222 710.0
MMD3_k127_192863_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 353.0
MMD3_k127_192863_2 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002207 267.0
MMD3_k127_1932951_0 PFAM Ribonuclease II K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 559.0
MMD3_k127_1932951_1 Haem-NO-binding - - - 0.00000000000000000000000000000276 127.0
MMD3_k127_1933061_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.0 1011.0
MMD3_k127_1934601_0 XdhC Rossmann domain - - - 0.000000000000000000000000000000000000000000000000000006733 196.0
MMD3_k127_1934601_1 XdhC Rossmann domain K07402 - - 0.000000000000004827 82.0
MMD3_k127_1937368_0 Carbamoyl-phosphate synthase L chain, ATP binding domain - - - 0.00000000000000000000000000000000000000000000003449 184.0
MMD3_k127_1937368_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000007985 164.0
MMD3_k127_1937368_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000008031 122.0
MMD3_k127_1950509_0 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000005054 160.0
MMD3_k127_1950509_1 - - - - 0.000000000000000000000000000000000000000007811 160.0
MMD3_k127_1953534_0 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 493.0
MMD3_k127_1953534_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000001754 236.0
MMD3_k127_195569_0 Glycosyl hydrolase family 57 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 419.0
MMD3_k127_1969638_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K18916 - 1.20.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 380.0
MMD3_k127_1969638_1 ABC-type phosphate phosphonate transport system, ATPase component K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000001577 191.0
MMD3_k127_1969638_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000001927 193.0
MMD3_k127_1969638_3 organic phosphonate transmembrane transporter activity K02042 - - 0.000000000000000000000000000000000000000000000000003476 199.0
MMD3_k127_1969638_4 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000003865 142.0
MMD3_k127_1993693_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 486.0
MMD3_k127_1993693_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 409.0
MMD3_k127_1993693_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003566 254.0
MMD3_k127_1993693_3 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000004141 179.0
MMD3_k127_1993693_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000003016 170.0
MMD3_k127_1993693_5 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000004804 68.0
MMD3_k127_2001666_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 470.0
MMD3_k127_2001666_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001095 253.0
MMD3_k127_2001666_2 anaphase-promoting complex binding K03497 - - 0.000000000000000000000000000000000000000000000000000000000009684 221.0
MMD3_k127_2009860_0 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000005502 187.0
MMD3_k127_2009860_1 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000001033 168.0
MMD3_k127_2009860_2 Cytochrome D1 heme domain - - - 0.00000000000000000000000001046 115.0
MMD3_k127_2010004_0 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 321.0
MMD3_k127_2010004_1 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 302.0
MMD3_k127_2010004_2 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000005536 202.0
MMD3_k127_2011428_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 301.0
MMD3_k127_2011428_1 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000006093 126.0
MMD3_k127_2015729_0 Tricorn protease PDZ domain K08676 - - 0.0 1168.0
MMD3_k127_2025922_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 323.0
MMD3_k127_2025922_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000002528 177.0
MMD3_k127_2030777_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.477e-200 633.0
MMD3_k127_2030777_1 - - - - 0.00001148 53.0
MMD3_k127_2033888_0 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 461.0
MMD3_k127_2033888_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 371.0
MMD3_k127_2033888_2 SnoaL-like domain K06893 - - 0.000000000000000000000000000000000000000004646 158.0
MMD3_k127_2033888_3 - - - - 0.00000289 57.0
MMD3_k127_2035209_0 Histidine kinase K02482 - 2.7.13.3 9.798e-266 855.0
MMD3_k127_2035209_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000005278 127.0
MMD3_k127_2036075_0 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 388.0
MMD3_k127_2038790_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1066.0
MMD3_k127_2038790_1 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000001935 220.0
MMD3_k127_2038790_3 -acetyltransferase K03823 - 2.3.1.183 0.0000000008269 66.0
MMD3_k127_2040756_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 402.0
MMD3_k127_2040756_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000006186 145.0
MMD3_k127_2041204_0 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 518.0
MMD3_k127_2041204_1 transferase activity, transferring nitrogenous groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 347.0
MMD3_k127_2041204_2 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 307.0
MMD3_k127_2041204_3 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000003366 177.0
MMD3_k127_2041204_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000005777 59.0
MMD3_k127_2041848_0 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 407.0
MMD3_k127_2041848_1 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000001115 170.0
MMD3_k127_2041848_2 WXG100 protein secretion system (Wss), protein YukD - - - 0.00000000000000000000000000000009281 130.0
MMD3_k127_2041848_3 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000304 81.0
MMD3_k127_2041848_4 Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain K04771 GO:0008150,GO:0009266,GO:0009628,GO:0050896 3.4.21.107 0.000000000000008344 86.0
MMD3_k127_2043337_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 332.0
MMD3_k127_2043337_1 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000932 159.0
MMD3_k127_2043337_2 chemotaxis signal transduction protein K03408 - - 0.0000000000000005271 83.0
MMD3_k127_2043337_3 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 0.0001195 52.0
MMD3_k127_2045273_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1316.0
MMD3_k127_2045273_1 Elongation factor G, domain IV K02355 - - 3.239e-262 818.0
MMD3_k127_2045273_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000001181 173.0
MMD3_k127_2045273_3 PFAM natural resistance-associated macrophage protein K03322 - - 0.0000000000000000000000000000000000003679 144.0
MMD3_k127_2071153_0 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 385.0
MMD3_k127_2071153_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 360.0
MMD3_k127_2071153_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000336 193.0
MMD3_k127_2071153_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000001443 149.0
MMD3_k127_2071153_4 PFAM Lipid A - - - 0.0000000000000000000006176 103.0
MMD3_k127_2071250_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 450.0
MMD3_k127_2071250_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000004029 171.0
MMD3_k127_2071250_3 to Saccharomyces cerevisiae CAJ1 (YER048C) - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006457,GO:0006605,GO:0006625,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007031,GO:0008104,GO:0008150,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016558,GO:0017038,GO:0030544,GO:0031072,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043574,GO:0044424,GO:0044464,GO:0044743,GO:0045040,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0090151 - 0.000002584 54.0
MMD3_k127_2079949_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003026 273.0
MMD3_k127_2079949_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002111 239.0
MMD3_k127_2079949_2 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K01342,K08651,K14645,K14743,K20486,K20754 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009405,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0031224,GO:0031226,GO:0032879,GO:0040007,GO:0043170,GO:0044238,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0051046,GO:0051049,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.21.111,3.4.21.62,3.4.21.66 0.0000000000000000000000000000004949 127.0
MMD3_k127_2089920_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 466.0
MMD3_k127_2089920_1 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 374.0
MMD3_k127_2089920_2 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000857 245.0
MMD3_k127_2089920_3 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000000009739 169.0
MMD3_k127_2101806_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 320.0
MMD3_k127_2101806_1 Cupin 2, conserved barrel domain protein - - - 0.00000000000000006673 83.0
MMD3_k127_2106590_0 PFAM peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 7.247e-285 891.0
MMD3_k127_2106590_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009652 272.0
MMD3_k127_2106590_2 tRNA synthetase subunit beta - - - 0.00000000000000000000000000000000000000000000000000000000000006358 220.0
MMD3_k127_2106590_3 TipAS antibiotic-recognition domain - - - 0.000000000000000000000000000000000000000000000000000000008042 207.0
MMD3_k127_2106590_4 - - - - 0.0000000000000000000000000004249 130.0
MMD3_k127_2110645_0 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 319.0
MMD3_k127_2110645_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000002351 190.0
MMD3_k127_2110645_2 Glucose inhibited division protein A - - - 0.0000000000000000000000007509 108.0
MMD3_k127_2117439_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 427.0
MMD3_k127_2127659_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 348.0
MMD3_k127_2127659_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001073 276.0
MMD3_k127_2127659_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000003722 213.0
MMD3_k127_212901_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 3.236e-310 960.0
MMD3_k127_212901_1 Pyridine nucleotide-disulphide oxidoreductase K00266,K00528,K17722 - 1.18.1.2,1.19.1.1,1.3.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 441.0
MMD3_k127_2135598_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 418.0
MMD3_k127_2135598_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 387.0
MMD3_k127_2135598_2 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 329.0
MMD3_k127_2135598_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004242 274.0
MMD3_k127_2135598_4 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000003714 174.0
MMD3_k127_2135598_5 - - - - 0.00000000000000000000004081 107.0
MMD3_k127_2135979_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006712 438.0
MMD3_k127_2135979_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 352.0
MMD3_k127_2135979_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 344.0
MMD3_k127_2143215_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 456.0
MMD3_k127_2143215_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 294.0
MMD3_k127_2145301_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 402.0
MMD3_k127_2145301_1 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 284.0
MMD3_k127_2145301_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000001804 175.0
MMD3_k127_2145301_3 - - - - 0.000000000000000000000000000000000000000000004699 173.0
MMD3_k127_2145301_4 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000006719 154.0
MMD3_k127_2145301_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000003596 140.0
MMD3_k127_2148970_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 6.381e-267 828.0
MMD3_k127_2148970_1 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.0000000000000000000000000000000000003225 144.0
MMD3_k127_2149101_0 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003965 259.0
MMD3_k127_2149101_1 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000009982 157.0
MMD3_k127_2151972_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 367.0
MMD3_k127_2151972_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000001759 173.0
MMD3_k127_2151972_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000001382 175.0
MMD3_k127_2153785_0 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 291.0
MMD3_k127_2153785_1 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000507 257.0
MMD3_k127_2153785_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000001199 151.0
MMD3_k127_2154005_0 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001639 232.0
MMD3_k127_2154005_1 PFAM response regulator receiver K07665 - - 0.000000000000000000000000000000000000000000000000000005213 208.0
MMD3_k127_2154005_2 - - - - 0.000000000000000000000000000000002619 130.0
MMD3_k127_2154005_3 - - - - 0.00004465 50.0
MMD3_k127_2155135_0 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001658 278.0
MMD3_k127_2155135_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000001227 182.0
MMD3_k127_2155135_2 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000004262 166.0
MMD3_k127_2155135_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000002267 111.0
MMD3_k127_2155135_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.00000000000504 70.0
MMD3_k127_2159857_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 587.0
MMD3_k127_2159857_1 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000007372 212.0
MMD3_k127_2159857_2 PFAM thiamine monophosphate synthase K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000001757 184.0
MMD3_k127_2159857_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000004211 96.0
MMD3_k127_2159857_4 PFAM membrane protein of K08972 - - 0.00000000172 60.0
MMD3_k127_2165212_0 PFAM Polyphosphate kinase 2 K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 434.0
MMD3_k127_2165212_1 sulphate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003611 252.0
MMD3_k127_2165212_2 - - - - 0.0000000000000000000000000000000003242 136.0
MMD3_k127_2166708_0 PAS PAC sensor signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001721 263.0
MMD3_k127_2166708_1 Pfam:N_methyl_2 - - - 0.000000000000000000000000059 113.0
MMD3_k127_2166708_2 phosphorelay sensor kinase activity - - - 0.00000001876 67.0
MMD3_k127_2176590_0 - - - - 0.00000000000000000000000000000000000000000000000000000001093 207.0
MMD3_k127_2176590_1 Cysteine-rich CPXCG - - - 0.0000000000000000000001457 100.0
MMD3_k127_2176590_2 Peptidase family M50 - - - 0.0000001587 55.0
MMD3_k127_218030_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000003436 237.0
MMD3_k127_218030_1 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000005055 243.0
MMD3_k127_2180398_0 - - - - 0.00000000000000000000000000002183 137.0
MMD3_k127_2181614_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.124e-195 620.0
MMD3_k127_2185172_0 Histidine kinase K02480 - 2.7.13.3 0.000000000000000000000000000000000000000000007808 171.0
MMD3_k127_2185172_1 response regulator receiver K07696,K11624 - - 0.0000000000000000000007641 102.0
MMD3_k127_2193138_0 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 441.0
MMD3_k127_2193138_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000001318 235.0
MMD3_k127_2194664_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 371.0
MMD3_k127_2195431_0 ABC transporter K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 295.0
MMD3_k127_2195431_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009535 260.0
MMD3_k127_2197603_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000648 240.0
MMD3_k127_2203693_0 PFAM Iron permease FTR1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 327.0
MMD3_k127_2219269_0 negative regulation of transcription, DNA-templated K10947 - - 0.0000000000000000000000000000000000000000001453 162.0
MMD3_k127_2219269_1 Aminotransferase, class I K00817 - 2.6.1.9 0.00000000000000000000000000202 118.0
MMD3_k127_2219269_2 membrane - - - 0.000000000000000000003235 101.0
MMD3_k127_2219269_3 - - - - 0.000000000000000009012 90.0
MMD3_k127_2219269_4 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00002798 48.0
MMD3_k127_2220446_0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 308.0
MMD3_k127_2220446_1 - - - - 0.00000000000000000000000000000000000000000007003 168.0
MMD3_k127_2220574_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 348.0
MMD3_k127_2220574_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000225 266.0
MMD3_k127_2220574_3 - - - - 0.00000000000000000000000000000000000001378 147.0
MMD3_k127_222925_0 CHASE3 domain - - - 1.115e-233 743.0
MMD3_k127_222925_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 342.0
MMD3_k127_222925_2 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007128 265.0
MMD3_k127_222925_3 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000001082 217.0
MMD3_k127_222925_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000000000000000000009395 167.0
MMD3_k127_222925_5 Response regulator, receiver K10819,K20975 - 2.7.13.3 0.00000000000000000000008382 102.0
MMD3_k127_2235843_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 463.0
MMD3_k127_2235843_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000001577 238.0
MMD3_k127_2235843_2 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000221 175.0
MMD3_k127_2235843_3 COGs COG3603 conserved K09707 - - 0.00000000000000000000000002296 113.0
MMD3_k127_2235843_4 PQ loop repeat K15383 - - 0.000000000000000001006 93.0
MMD3_k127_2236216_0 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 316.0
MMD3_k127_2236216_1 Belongs to the serpin family K13963 - - 0.000000000000000000000000000000000000000000002801 174.0
MMD3_k127_2239453_0 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 364.0
MMD3_k127_2239453_1 COG0474 Cation transport ATPase K01531 - 3.6.3.2 0.000000000000000000000000000000000000000001045 158.0
MMD3_k127_2241848_0 efflux protein, MATE family K03327 - - 0.000000000000000000000000000000000000000000000000000000009244 203.0
MMD3_k127_2241848_1 transport - - - 0.000008484 57.0
MMD3_k127_2242043_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 541.0
MMD3_k127_2244052_0 CHASE2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 429.0
MMD3_k127_2244052_1 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000005607 106.0
MMD3_k127_2247536_0 Belongs to the GSP D family K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 348.0
MMD3_k127_2254626_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 418.0
MMD3_k127_2254626_1 - - - - 0.000000000000000000000000000000000000000000000000000005277 194.0
MMD3_k127_2257911_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1303.0
MMD3_k127_2257911_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000877 218.0
MMD3_k127_2257911_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000005939 172.0
MMD3_k127_2265961_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 374.0
MMD3_k127_2271686_0 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 285.0
MMD3_k127_2271686_1 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000003016 170.0
MMD3_k127_2271686_2 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000005874 128.0
MMD3_k127_2271686_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000002368 107.0
MMD3_k127_2273361_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005611 256.0
MMD3_k127_2273361_1 Lipase (class 3) K01046 - 3.1.1.3 0.0000000000000000000001864 104.0
MMD3_k127_2273361_2 - - - - 0.0000000129 64.0
MMD3_k127_2275095_0 Protein involved in outer membrane biogenesis K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 377.0
MMD3_k127_2275095_1 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000563 112.0
MMD3_k127_2275095_2 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.00000008931 60.0
MMD3_k127_2277007_0 protein involved in exopolysaccharide biosynthesis K16554 - - 0.000002179 59.0
MMD3_k127_2277007_1 - K14337,K14339 - - 0.0008646 51.0
MMD3_k127_2282368_0 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 295.0
MMD3_k127_2282368_1 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000006506 216.0
MMD3_k127_2282368_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000005705 95.0
MMD3_k127_2282703_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1224.0
MMD3_k127_2285956_0 Protein kinase domain K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000829 288.0
MMD3_k127_2285956_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006079 265.0
MMD3_k127_2285956_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000004736 180.0
MMD3_k127_2285956_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000002031 172.0
MMD3_k127_2285956_4 - - - - 0.000000000000000000000003504 108.0
MMD3_k127_2292531_0 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 551.0
MMD3_k127_2292531_1 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 471.0
MMD3_k127_2292531_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 364.0
MMD3_k127_2292531_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 337.0
MMD3_k127_2299485_0 SPTR ATPase associated with various cellular activities AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 364.0
MMD3_k127_2299485_1 von Willebrand factor, type A K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 301.0
MMD3_k127_2300683_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 295.0
MMD3_k127_2300683_1 PFAM Formiminotransferase domain K00603,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000007866 164.0
MMD3_k127_2300683_2 Oxidoreductase molybdopterin binding domain - - - 0.00000000000005947 74.0
MMD3_k127_2310492_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 319.0
MMD3_k127_2310492_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000003794 248.0
MMD3_k127_231420_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 411.0
MMD3_k127_231420_1 Ribosomal L32p protein family K02911 - - 0.00000000000000000000000000005127 116.0
MMD3_k127_2315245_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917 595.0
MMD3_k127_2315245_1 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000202 139.0
MMD3_k127_2315245_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000001542 107.0
MMD3_k127_2315245_3 PFAM SNARE associated Golgi protein - - - 0.000001116 53.0
MMD3_k127_2315840_0 NADH ubiquinone oxidoreductase, 20 Kd subunit K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 312.0
MMD3_k127_2315840_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002911 279.0
MMD3_k127_2315840_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002914 255.0
MMD3_k127_2315840_3 molybdenum ion binding K07140 - - 0.00000000000000000000000000000000000000000000000000000000000006484 220.0
MMD3_k127_2315840_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000002743 216.0
MMD3_k127_2315840_5 CGNR zinc finger - - - 0.0000000000000000000000000000307 124.0
MMD3_k127_2315840_6 Domain of unknown function (DU1801) - - - 0.0000000000000000000002344 101.0
MMD3_k127_2315840_7 Ferrochelatase K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000001197 68.0
MMD3_k127_2324915_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 301.0
MMD3_k127_2324915_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 GO:0000287,GO:0003674,GO:0003824,GO:0004422,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006166,GO:0006177,GO:0006188,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032261,GO:0032263,GO:0032264,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043167,GO:0043169,GO:0043173,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.8 0.0000000000000000000000000000000000000000000000001212 183.0
MMD3_k127_2330593_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.49e-215 679.0
MMD3_k127_2330593_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.0000000000000000000000000000387 119.0
MMD3_k127_2340349_0 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 291.0
MMD3_k127_2340349_1 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001786 251.0
MMD3_k127_2340349_2 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000009738 207.0
MMD3_k127_2340349_3 - - - - 0.00000000000000000000000000000000000000003079 152.0
MMD3_k127_2340977_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 327.0
MMD3_k127_2340977_1 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000000000000000000000000000006298 171.0
MMD3_k127_2342143_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ - - - 7.356e-230 717.0
MMD3_k127_2342143_1 EamA-like transporter family - - - 0.000000000000000000000000000000000002444 141.0
MMD3_k127_2342143_2 FAD dependent oxidoreductase K00514 - 1.3.5.6 0.000000000000000000000000000000000008244 138.0
MMD3_k127_2342143_3 membrane - - - 0.000000000000000000000000003827 114.0
MMD3_k127_2344890_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 559.0
MMD3_k127_2344890_1 tRNA processing K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 377.0
MMD3_k127_2344890_2 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 317.0
MMD3_k127_2344890_3 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000475 286.0
MMD3_k127_2344890_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000001722 210.0
MMD3_k127_2344890_5 Biotin-requiring enzyme - - - 0.00000000000000000000000000000000000000008416 159.0
MMD3_k127_2344890_6 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000005598 109.0
MMD3_k127_2347954_0 exodeoxyribonuclease I activity K01469,K01473 - 3.5.2.14,3.5.2.9 0.0000000000000000000000000000000000000000000000003023 178.0
MMD3_k127_2347954_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000002361 166.0
MMD3_k127_2348006_0 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005396 252.0
MMD3_k127_2348006_1 endonuclease III - - - 0.0000000000000000000000000000000000000000000000000000000002627 212.0
MMD3_k127_2348006_2 - - - - 0.000000000000008124 76.0
MMD3_k127_2348006_3 serine-type endopeptidase activity K01404,K08654,K12813 - 3.4.24.36,3.6.4.13 0.0008731 44.0
MMD3_k127_2348418_0 PFAM Conserved region in glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.000000000000000000000000000000000000000000000000007738 193.0
MMD3_k127_2350795_0 CheR methyltransferase, all-alpha domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 433.0
MMD3_k127_2350795_1 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000006496 214.0
MMD3_k127_2353060_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001686 280.0
MMD3_k127_2353060_1 AMP-binding enzyme C-terminal domain K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000003966 234.0
MMD3_k127_2361703_0 PFAM Glycosyl K12994 - 2.4.1.349 0.00000000000000000000000000000000000000000001638 170.0
MMD3_k127_2361703_1 transferase activity, transferring glycosyl groups K03271 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008968,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016853,GO:0016866,GO:0016868,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.3.1.28 0.000000000000000000000000000000594 136.0
MMD3_k127_2362415_0 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 426.0
MMD3_k127_2364905_0 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003962 262.0
MMD3_k127_2364905_1 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000004865 137.0
MMD3_k127_2368197_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 443.0
MMD3_k127_237000_0 - - - - 0.0000000000000000000000007905 109.0
MMD3_k127_237000_1 DNA-templated transcription, initiation - - - 0.00000000000001754 84.0
MMD3_k127_2380665_0 GGDEF domain - - - 1.467e-266 846.0
MMD3_k127_2380665_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000006578 196.0
MMD3_k127_2380665_2 Amino acid permease - - - 0.0000000000000000000000000000000000000000002658 163.0
MMD3_k127_2384834_0 translation initiation factor activity K02004,K10939,K12257,K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002717 270.0
MMD3_k127_2384834_1 - - - - 0.0000000000000000000000000000001615 129.0
MMD3_k127_2387375_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 514.0
MMD3_k127_2387375_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 431.0
MMD3_k127_2387375_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 376.0
MMD3_k127_2397449_0 Sortilin, neurotensin receptor 3, - - - 1.868e-222 701.0
MMD3_k127_2397449_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.214e-220 690.0
MMD3_k127_2397449_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 396.0
MMD3_k127_2397449_3 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000000002564 131.0
MMD3_k127_2399212_0 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000209 182.0
MMD3_k127_2399212_1 - - - - 0.000000000000000003947 87.0
MMD3_k127_2405535_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 586.0
MMD3_k127_2405535_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000004355 169.0
MMD3_k127_2405535_2 - - - - 0.000000000000000000000000000000000000000002858 167.0
MMD3_k127_2405535_3 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000001081 152.0
MMD3_k127_2406767_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 447.0
MMD3_k127_2406767_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 291.0
MMD3_k127_2431612_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000008356 145.0
MMD3_k127_2431612_1 PFAM TonB-dependent Receptor - - - 0.00000000000000000000000000000001672 145.0
MMD3_k127_2433921_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 424.0
MMD3_k127_2437140_0 MacB-like periplasmic core domain - - - 1.534e-222 716.0
MMD3_k127_2437140_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 361.0
MMD3_k127_2437140_2 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 357.0
MMD3_k127_2437140_3 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001744 256.0
MMD3_k127_2437140_4 ABC transporter K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000001784 200.0
MMD3_k127_2437140_5 RNA-binding S4 domain protein K04762 - - 0.000000000000000000000000000000000000000000000000007431 183.0
MMD3_k127_2437140_6 TIGRFAM DNA binding domain protein, excisionase family - - - 0.00000000000000000000000000000000000000000006754 163.0
MMD3_k127_2437140_7 Disulphide isomerase - - - 0.000000000000000000000002197 103.0
MMD3_k127_2443357_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 5e-324 1000.0
MMD3_k127_2443357_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 562.0
MMD3_k127_2443357_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 332.0
MMD3_k127_2443357_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000004622 122.0
MMD3_k127_2443357_4 - - - - 0.0000003636 59.0
MMD3_k127_2450843_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 409.0
MMD3_k127_2451735_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 479.0
MMD3_k127_2451735_1 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 303.0
MMD3_k127_2451735_2 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000000000000000000000008863 171.0
MMD3_k127_2451735_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000004127 48.0
MMD3_k127_2452482_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.211e-237 737.0
MMD3_k127_2455429_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 577.0
MMD3_k127_2455429_1 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000001315 227.0
MMD3_k127_2455429_2 CheR methyltransferase, all-alpha domain K00575 - 2.1.1.80 0.00000000000000009904 81.0
MMD3_k127_2456314_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 400.0
MMD3_k127_2456314_1 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.00000000000000000000000000000000000000000000000000003047 193.0
MMD3_k127_2467399_0 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008088 452.0
MMD3_k127_2467399_1 Zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 435.0
MMD3_k127_2467399_2 Universal stress protein - - - 0.00000000000000000000000000000000545 139.0
MMD3_k127_2467399_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000001363 105.0
MMD3_k127_2467399_4 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000009679 86.0
MMD3_k127_2472081_0 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 445.0
MMD3_k127_2472081_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000001498 173.0
MMD3_k127_2472081_2 response regulator - - - 0.00000000000000000008195 99.0
MMD3_k127_2472081_3 EAL domain - - - 0.000002243 59.0
MMD3_k127_2475835_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000001371 231.0
MMD3_k127_2475835_1 lipopolysaccharide transport K22110 - - 0.00000000000000000000000000000000000000000000000000000000000007161 214.0
MMD3_k127_249148_0 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 2.142e-261 812.0
MMD3_k127_249148_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 515.0
MMD3_k127_249148_2 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 297.0
MMD3_k127_2491690_0 cellular response to heat K09807 - - 0.0000000000000000000000000000000000000000000000000000000293 205.0
MMD3_k127_2491690_1 peroxiredoxin activity K03564 - 1.11.1.15 0.000000000000118 73.0
MMD3_k127_2491690_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000001316 64.0
MMD3_k127_2493015_0 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 326.0
MMD3_k127_2493015_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000001332 237.0
MMD3_k127_2493015_2 ROK family K00845 - 2.7.1.2 0.000000000000000002937 87.0
MMD3_k127_2509113_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 407.0
MMD3_k127_2509113_1 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.0000000000000002842 82.0
MMD3_k127_2525361_0 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000001958 192.0
MMD3_k127_2540249_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 524.0
MMD3_k127_2540249_1 transport system permease K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 371.0
MMD3_k127_2540249_2 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 367.0
MMD3_k127_2540249_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000001755 235.0
MMD3_k127_2544329_0 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 419.0
MMD3_k127_2544329_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005297 269.0
MMD3_k127_2544329_2 - - - - 0.00000000000000000000001146 106.0
MMD3_k127_2545902_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005186 286.0
MMD3_k127_2545902_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000001575 234.0
MMD3_k127_2545902_3 cellulose binding - - - 0.00000000002853 67.0
MMD3_k127_2554775_0 peptidyl-tyrosine sulfation - - - 0.00000000000002999 77.0
MMD3_k127_2554775_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000001405 55.0
MMD3_k127_2561138_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 518.0
MMD3_k127_2563008_0 PFAM Organic solvent tolerance protein K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 528.0
MMD3_k127_2567083_0 MacB-like periplasmic core domain - - - 1.034e-200 653.0
MMD3_k127_2567083_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008218 367.0
MMD3_k127_2567083_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000005247 132.0
MMD3_k127_2567083_3 Probable zinc-ribbon domain - - - 0.0000000000004377 74.0
MMD3_k127_2569405_0 Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001068 275.0
MMD3_k127_2569405_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000001498 192.0
MMD3_k127_2570507_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.604e-283 878.0
MMD3_k127_2570507_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 7.436e-232 722.0
MMD3_k127_2570507_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 341.0
MMD3_k127_2570507_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003914 277.0
MMD3_k127_2571237_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 587.0
MMD3_k127_2571237_1 Carboxypeptidase regulatory-like domain - - - 0.000000000549 65.0
MMD3_k127_257274_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001165 250.0
MMD3_k127_257274_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000002489 240.0
MMD3_k127_257274_2 Protein of unknown function with PCYCGC motif - - - 0.0000000000000000000000000000000000001076 146.0
MMD3_k127_257274_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000004301 139.0
MMD3_k127_257274_4 carboxymuconolactone decarboxylase - - - 0.00000000000000000000002997 102.0
MMD3_k127_257642_0 Peptidase family M13 - - - 1.001e-304 948.0
MMD3_k127_257642_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 397.0
MMD3_k127_257642_2 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000004563 278.0
MMD3_k127_257642_3 Copper homeostasis protein K06201 - - 0.00000000000000000000000000000000000000000000000000000000000000003517 233.0
MMD3_k127_257642_4 - - - - 0.0000000000000000007201 91.0
MMD3_k127_2577042_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 604.0
MMD3_k127_2578197_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 422.0
MMD3_k127_2578197_1 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 306.0
MMD3_k127_2578197_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002079 284.0
MMD3_k127_2578197_3 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000006946 204.0
MMD3_k127_2578197_4 Mur ligase middle domain K02558 - 6.3.2.45 0.000000000000000000000000003795 111.0
MMD3_k127_2582258_0 Ribosomal protein S1 K02945 - - 3.467e-269 835.0
MMD3_k127_2582258_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000004649 103.0
MMD3_k127_2582258_3 - K05826 - - 0.0000000000003501 72.0
MMD3_k127_258608_0 surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 542.0
MMD3_k127_258608_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000629 226.0
MMD3_k127_258608_2 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000000000000000000000000003836 128.0
MMD3_k127_2600434_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 295.0
MMD3_k127_2600434_1 - - - - 0.000000001582 69.0
MMD3_k127_2602746_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000003993 173.0
MMD3_k127_2602746_2 Tetratricopeptide repeat - - - 0.00008702 45.0
MMD3_k127_260447_0 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000000000000000000000000005226 169.0
MMD3_k127_260447_1 - - - - 0.0000000000000000000000174 103.0
MMD3_k127_2604767_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000004368 258.0
MMD3_k127_2604767_1 - - - - 0.00000000000000000000000000000000001905 147.0
MMD3_k127_2604767_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000002253 109.0
MMD3_k127_2609774_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 586.0
MMD3_k127_2609774_1 methyltransferase activity - - - 0.00000000000000000000000000000000000000000001199 172.0
MMD3_k127_2609774_2 DNA polymerase LigD, ligase domain K01971 - 6.5.1.1 0.0000017 50.0
MMD3_k127_2613355_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 405.0
MMD3_k127_2613355_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002394 260.0
MMD3_k127_2613355_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000007645 196.0
MMD3_k127_2613355_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000513 166.0
MMD3_k127_2613355_4 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000001096 117.0
MMD3_k127_2613355_5 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000001647 76.0
MMD3_k127_2613355_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000835 50.0
MMD3_k127_2618498_0 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 478.0
MMD3_k127_2618498_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007511 249.0
MMD3_k127_2619363_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 447.0
MMD3_k127_2619363_1 HD domain K07023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 313.0
MMD3_k127_2619363_2 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000000000000000000000000000000000000001903 163.0
MMD3_k127_2625110_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 449.0
MMD3_k127_2625674_0 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 520.0
MMD3_k127_2625674_1 TIGRFAM hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 - 2.4.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 430.0
MMD3_k127_2625674_2 cellulose binding - - - 0.00000000000000000000000000000000000000000001075 169.0
MMD3_k127_2625674_3 - - - - 0.0000000007833 66.0
MMD3_k127_2633231_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009423 367.0
MMD3_k127_2633231_1 MFP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008475 272.0
MMD3_k127_2638790_0 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 342.0
MMD3_k127_2638790_1 - - - - 0.00000000000000000000000000000000000000002705 163.0
MMD3_k127_2643354_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 318.0
MMD3_k127_2643354_1 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000000000003635 216.0
MMD3_k127_2645682_0 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000002238 171.0
MMD3_k127_2645682_1 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000002291 166.0
MMD3_k127_2645682_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000539 94.0
MMD3_k127_2645682_3 SnoaL-like polyketide cyclase - - - 0.000000000000000004569 89.0
MMD3_k127_2656794_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000009532 233.0
MMD3_k127_2656794_1 methyltransferase - - - 0.000000000000000000000000000000000000000001177 175.0
MMD3_k127_2656794_2 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000005001 124.0
MMD3_k127_2656794_3 MviN-like protein K03980 - - 0.000000000000000000000003391 119.0
MMD3_k127_2656794_4 PFAM Methyltransferase type 11 - - - 0.0000000000000000001645 99.0
MMD3_k127_2656794_5 PFAM Glycosyl transferase, group 1 K12994 - 2.4.1.349 0.000000000000381 76.0
MMD3_k127_2656794_6 O-Antigen ligase - - - 0.00000003592 66.0
MMD3_k127_2658618_0 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 416.0
MMD3_k127_2658618_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000006629 124.0
MMD3_k127_2658618_2 - - - - 0.000000002251 59.0
MMD3_k127_2661602_0 Bacterial Peptidase A24 N-terminal domain K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004409 274.0
MMD3_k127_2661602_1 - - - - 0.0000000000000000000000000000000000000006487 156.0
MMD3_k127_2661602_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000001385 136.0
MMD3_k127_2661602_3 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000001676 110.0
MMD3_k127_2661942_0 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004312 243.0
MMD3_k127_2661942_1 Transcriptional regulator PadR-like family K10947 - - 0.0000000000000000000000000000000000000000000001158 170.0
MMD3_k127_2666048_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.757e-295 924.0
MMD3_k127_267305_0 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 601.0
MMD3_k127_267305_1 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000003005 220.0
MMD3_k127_267305_2 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000005433 173.0
MMD3_k127_267305_3 - - - - 0.000000004807 66.0
MMD3_k127_2695299_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 376.0
MMD3_k127_2695299_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000001409 64.0
MMD3_k127_2695702_0 Lantibiotic biosynthesis dehydratase C-term K20483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566 477.0
MMD3_k127_2695702_1 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 396.0
MMD3_k127_2695702_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 334.0
MMD3_k127_2701110_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 496.0
MMD3_k127_2701110_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000001712 141.0
MMD3_k127_2701110_2 translation release factor activity K03265 - - 0.000007195 53.0
MMD3_k127_270177_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 3.611e-219 689.0
MMD3_k127_270177_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 285.0
MMD3_k127_270177_10 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.0004873 46.0
MMD3_k127_270177_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002471 257.0
MMD3_k127_270177_3 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000002554 218.0
MMD3_k127_270177_4 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000002639 213.0
MMD3_k127_270177_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000001843 201.0
MMD3_k127_270177_6 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000007018 154.0
MMD3_k127_270177_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000001199 141.0
MMD3_k127_270177_8 Ribosomal protein L30 K02907 - - 0.000000000000000000000003667 103.0
MMD3_k127_270177_9 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000002892 75.0
MMD3_k127_2705030_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 543.0
MMD3_k127_2705030_1 Fibronectin type 3 domain - - - 0.000000000000000000003504 104.0
MMD3_k127_2711750_0 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 469.0
MMD3_k127_2711750_1 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 352.0
MMD3_k127_2711750_2 - - - - 0.00000000000000000000000000000000000000000000000000005553 194.0
MMD3_k127_2711750_3 PilZ domain - - - 0.0000000000000003509 81.0
MMD3_k127_2711801_0 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 2.16e-278 865.0
MMD3_k127_2711801_1 Aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009762 417.0
MMD3_k127_2711801_2 PFAM LrgB family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005289 250.0
MMD3_k127_2717505_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 364.0
MMD3_k127_2717505_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000009112 215.0
MMD3_k127_2720037_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 357.0
MMD3_k127_2723501_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 568.0
MMD3_k127_2723501_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 531.0
MMD3_k127_272462_0 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 572.0
MMD3_k127_272462_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000005287 140.0
MMD3_k127_2733001_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 508.0
MMD3_k127_2733001_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000001574 158.0
MMD3_k127_2735511_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 410.0
MMD3_k127_2735761_0 GTP-binding protein TypA K06207 - - 9.763e-217 678.0
MMD3_k127_273725_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 1.155e-208 657.0
MMD3_k127_273725_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000001444 198.0
MMD3_k127_2738147_0 Amino acid permease K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 332.0
MMD3_k127_2738147_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000004019 178.0
MMD3_k127_2738147_2 AMP binding - - - 0.000000000000005295 81.0
MMD3_k127_2738147_3 Insulinase (Peptidase family M16) - - - 0.000000004202 59.0
MMD3_k127_2739695_0 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 298.0
MMD3_k127_2739695_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000005163 205.0
MMD3_k127_2746606_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 7.65e-210 658.0
MMD3_k127_2746606_1 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000001736 230.0
MMD3_k127_2746606_2 synthetase, class II (G H P K01892 - 6.1.1.21 0.00000000000000000000000000000003845 127.0
MMD3_k127_2748198_0 Peptidase M16 inactive domain K07263 - - 4.209e-198 635.0
MMD3_k127_2748198_1 MoeZ MoeB K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 468.0
MMD3_k127_2748198_2 surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001005 293.0
MMD3_k127_2751719_0 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 399.0
MMD3_k127_2751719_1 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000002781 192.0
MMD3_k127_2753459_0 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 430.0
MMD3_k127_2753459_1 Phospholipid methyltransferase - - - 0.000000000000000000000001366 109.0
MMD3_k127_2753459_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000001671 91.0
MMD3_k127_2764911_0 UDP-N-acetylglucosamine 2-epimerase activity K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
MMD3_k127_2764911_1 PFAM transferase hexapeptide repeat containing protein - - - 0.0000000000000000000000000000000000009601 139.0
MMD3_k127_277859_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 539.0
MMD3_k127_277859_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000004016 123.0
MMD3_k127_277859_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000005004 100.0
MMD3_k127_2781699_0 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 522.0
MMD3_k127_2781699_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000926 271.0
MMD3_k127_2781699_2 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000000006624 194.0
MMD3_k127_2784444_0 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000005579 245.0
MMD3_k127_2784444_1 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000005122 222.0
MMD3_k127_2784444_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000001309 105.0
MMD3_k127_2792938_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007352 274.0
MMD3_k127_2792938_1 - - - - 0.00000001629 64.0
MMD3_k127_2805341_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 2.152e-214 671.0
MMD3_k127_2805341_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 556.0
MMD3_k127_2809647_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 527.0
MMD3_k127_2809647_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 423.0
MMD3_k127_2809647_2 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001808 276.0
MMD3_k127_2809647_3 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000176 263.0
MMD3_k127_2809647_4 synthase K01719 - 4.2.1.75 0.00000000000000000001844 94.0
MMD3_k127_2826793_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002816 272.0
MMD3_k127_2826793_1 Type VI secretion system effector, Hcp K06887,K11903 - - 0.000000000000000000000000000000000006464 144.0
MMD3_k127_285439_0 PFAM alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001657 246.0
MMD3_k127_285439_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000005575 122.0
MMD3_k127_2858462_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 361.0
MMD3_k127_2858462_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 320.0
MMD3_k127_2858462_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 291.0
MMD3_k127_2860855_0 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1097.0
MMD3_k127_2860855_1 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000002382 124.0
MMD3_k127_286475_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 334.0
MMD3_k127_2865843_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 346.0
MMD3_k127_2865843_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 335.0
MMD3_k127_2865843_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000004299 164.0
MMD3_k127_2865843_3 Cold shock protein K03704 - - 0.000000000000000000000000000000007608 130.0
MMD3_k127_2865843_4 Amidohydrolase family - - - 0.000003318 52.0
MMD3_k127_2870580_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1172.0
MMD3_k127_2870580_1 Amidase - - - 4.333e-298 924.0
MMD3_k127_2870580_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII - - - 0.0000000000000000000832 97.0
MMD3_k127_2878067_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 570.0
MMD3_k127_2878067_1 Molybdopterin dehydrogenase K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 374.0
MMD3_k127_2882769_0 choline dehydrogenase activity - - - 2.344e-206 653.0
MMD3_k127_2882769_1 lactoylglutathione lyase activity K00446 - 1.13.11.2 0.0000000000005983 72.0
MMD3_k127_2885509_0 class II (D K K01893 - 6.1.1.22 1.573e-210 658.0
MMD3_k127_2889371_0 transmembrane transporter activity K08225 - - 0.000000000000000000000000000000000000000000000002684 185.0
MMD3_k127_2889371_1 transcriptional regulator - - - 0.0000000000000000000000000002289 123.0
MMD3_k127_2889371_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000001953 73.0
MMD3_k127_2895185_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.142e-276 855.0
MMD3_k127_2900475_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 6.433e-195 618.0
MMD3_k127_2904184_0 Histidine kinase - - - 0.0 1222.0
MMD3_k127_2904184_1 response regulator, receiver - - - 2.411e-210 662.0
MMD3_k127_2904184_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009842 374.0
MMD3_k127_2904184_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000005429 209.0
MMD3_k127_2904184_4 integral membrane protein - - - 0.00000000000000000000000001369 118.0
MMD3_k127_2904184_5 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000006356 100.0
MMD3_k127_2906398_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 393.0
MMD3_k127_2906398_1 Histidine kinase K11383 - 2.7.13.3 0.0000000000000000000006462 99.0
MMD3_k127_2932654_0 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000001136 210.0
MMD3_k127_2932654_1 Proteolipid membrane potential modulator - - - 0.0000000000005864 70.0
MMD3_k127_2933553_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 545.0
MMD3_k127_2933553_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0006389 51.0
MMD3_k127_2935900_0 Prokaryotic cytochrome b561 - - - 3.351e-205 652.0
MMD3_k127_2935900_1 Prokaryotic cytochrome b561 - - - 6.517e-196 626.0
MMD3_k127_2937854_0 cellulose binding - - - 0.0 1042.0
MMD3_k127_2937854_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 424.0
MMD3_k127_2937854_2 PFAM Bile acid sodium symporter K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003196 268.0
MMD3_k127_2937924_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001093 278.0
MMD3_k127_2937924_1 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000001354 229.0
MMD3_k127_2937924_2 DoxX-like family - - - 0.00000000000000000000000000000000000002012 148.0
MMD3_k127_2941107_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000001947 188.0
MMD3_k127_2941107_1 - - - - 0.0000000000000135 84.0
MMD3_k127_2955704_0 - - - - 0.0000000000000000000000000000000000000000000001023 183.0
MMD3_k127_2955704_2 Cytochrome c K00406,K08906 - - 0.000000000000002198 79.0
MMD3_k127_2960084_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 447.0
MMD3_k127_2960660_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1651.0
MMD3_k127_2960660_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 434.0
MMD3_k127_2960660_2 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 413.0
MMD3_k127_2960660_3 - - - - 0.00000000000000000000000000000000000000000000000008925 188.0
MMD3_k127_2988918_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 291.0
MMD3_k127_2988918_1 hemolysin III K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001686 250.0
MMD3_k127_2993256_0 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008713 595.0
MMD3_k127_2993256_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 472.0
MMD3_k127_2993256_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 442.0
MMD3_k127_3002863_0 Tetratricopeptide repeat - - - 5.558e-207 658.0
MMD3_k127_3002863_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 345.0
MMD3_k127_3002863_2 glycolate biosynthetic process K01560,K07025 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 297.0
MMD3_k127_3002863_3 ABC-type multidrug transport system ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 293.0
MMD3_k127_3002863_4 [2Fe-2S] binding domain - - - 0.000000000000000000000000003183 112.0
MMD3_k127_3003117_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000001364 221.0
MMD3_k127_3003117_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000004858 201.0
MMD3_k127_3003117_2 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000001193 180.0
MMD3_k127_3003117_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000001265 166.0
MMD3_k127_3003117_5 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.00000000000000000000000003335 116.0
MMD3_k127_30134_0 Damage-inducible protein DinB - - - 0.00000000000000000000000000000000000000000000000000000000000007196 217.0
MMD3_k127_30134_1 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000007782 193.0
MMD3_k127_30134_2 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000000000000000000001886 152.0
MMD3_k127_30134_3 - - - - 0.000000000000000000000000001486 120.0
MMD3_k127_3020639_0 PFAM Amidase - - - 6.146e-259 811.0
MMD3_k127_3020639_1 Sortilin, neurotensin receptor 3, - - - 3.172e-226 722.0
MMD3_k127_3020639_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 487.0
MMD3_k127_302087_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 509.0
MMD3_k127_302087_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000009542 138.0
MMD3_k127_3022592_0 - - - - 0.0000000000000000000000000000000000000000000001659 183.0
MMD3_k127_3022592_1 - - - - 0.000002657 52.0
MMD3_k127_3023831_0 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 401.0
MMD3_k127_3023831_1 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 393.0
MMD3_k127_3023831_2 transcriptional regulator PadR family - - - 0.000000000000000000000000000000000008713 138.0
MMD3_k127_3026006_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000001295 183.0
MMD3_k127_3026006_1 PFAM PEGA domain - - - 0.000000005381 67.0
MMD3_k127_3026853_0 Bacterial protein of unknown function (DUF885) - - - 1.266e-224 711.0
MMD3_k127_3026853_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000006024 190.0
MMD3_k127_3027183_0 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 318.0
MMD3_k127_3027183_1 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000726 252.0
MMD3_k127_3045621_0 Sortilin, neurotensin receptor 3, - - - 3.631e-241 752.0
MMD3_k127_304926_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 322.0
MMD3_k127_304926_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000369 141.0
MMD3_k127_3082460_0 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 288.0
MMD3_k127_3082460_1 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000002496 228.0
MMD3_k127_3082460_2 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000005004 228.0
MMD3_k127_3082460_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000006612 175.0
MMD3_k127_3082460_4 protein-(glutamine-N5) methyltransferase activity K02493,K16868 - 2.1.1.265,2.1.1.297 0.0000000000000000000000000000000000000000002532 168.0
MMD3_k127_3082460_5 - - - - 0.000000000000000000000000000001363 133.0
MMD3_k127_3082460_6 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000002404 94.0
MMD3_k127_3082460_7 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000839 93.0
MMD3_k127_3082938_0 Antioxidant, AhpC TSA family - - - 0.00000000000000425 80.0
MMD3_k127_3085298_0 Permease, YjgP YjgQ - - - 1.013e-265 839.0
MMD3_k127_3085298_1 Glycosyl hydrolase family 57 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009189 307.0
MMD3_k127_3086124_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 373.0
MMD3_k127_3089410_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 601.0
MMD3_k127_3089689_0 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 427.0
MMD3_k127_3089689_1 RNA recognition motif - - - 0.00000000000000000000000000000000007597 137.0
MMD3_k127_3096735_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 515.0
MMD3_k127_3097902_1 PhoQ Sensor - - - 0.0000002535 56.0
MMD3_k127_3115722_0 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006917 271.0
MMD3_k127_3115722_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000008956 236.0
MMD3_k127_3115722_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000003517 51.0
MMD3_k127_3122764_0 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 544.0
MMD3_k127_3123250_0 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 331.0
MMD3_k127_3123250_1 multi-organism process K03195 - - 0.00000000000108 78.0
MMD3_k127_3123677_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 1.101e-287 887.0
MMD3_k127_3123677_1 Belongs to the GSP D family K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 321.0
MMD3_k127_3123677_2 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000000000000003656 195.0
MMD3_k127_3123677_3 Pfam:N_methyl_2 K02456 - - 0.00000000000000000000000000000000000000005864 154.0
MMD3_k127_3128900_0 carbon utilization K02664,K02665,K12280 - - 0.000000000000000000000000000000000000000000003514 172.0
MMD3_k127_3128900_1 PFAM Fimbrial assembly family protein K02663 - - 0.000000000000000000000005348 103.0
MMD3_k127_3129968_0 N-terminal domain of oxidoreductase K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 523.0
MMD3_k127_3129968_1 deoxyhypusine monooxygenase activity K05385 - - 0.00000000000000000000000000004567 118.0
MMD3_k127_3132057_0 - - - - 0.00000000000000000000000000000000000000003111 174.0
MMD3_k127_3133236_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 511.0
MMD3_k127_3133236_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 418.0
MMD3_k127_3133236_2 Protein phosphatase 2C K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 295.0
MMD3_k127_3133236_3 PFAM Major facilitator superfamily K02429 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000257 272.0
MMD3_k127_3133236_4 (FHA) domain - - - 0.000000000000000000004801 102.0
MMD3_k127_3133236_5 - - - - 0.00000000677 62.0
MMD3_k127_31403_0 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 298.0
MMD3_k127_31403_1 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000003414 214.0
MMD3_k127_31403_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000003092 194.0
MMD3_k127_31403_3 - - - - 0.0000003453 60.0
MMD3_k127_315303_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 357.0
MMD3_k127_3162383_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 508.0
MMD3_k127_3162383_1 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000426 263.0
MMD3_k127_3162383_2 - - - - 0.0000000000000000000000000000000000000000000000000000000002654 211.0
MMD3_k127_3162383_3 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000000000005039 187.0
MMD3_k127_3162383_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000002279 169.0
MMD3_k127_3162383_5 DinB family - - - 0.000000000000000000000000008471 122.0
MMD3_k127_3162383_6 integral membrane protein - - - 0.000000000000000000000000512 110.0
MMD3_k127_3162383_7 Protein of unknown function (DUF3106) - - - 0.0000000000000000000134 100.0
MMD3_k127_3162383_8 - - - - 0.00000000000000000003517 97.0
MMD3_k127_3163879_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 331.0
MMD3_k127_3163879_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000117 261.0
MMD3_k127_3164376_0 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 489.0
MMD3_k127_3165629_0 Alanine dehydrogenase/PNT, C-terminal domain K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 377.0
MMD3_k127_3165629_1 Enoyl-CoA hydratase isomerase K07539 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000001306 265.0
MMD3_k127_3166801_0 Uncharacterized protein family (UPF0051) K09014 - - 1.349e-275 852.0
MMD3_k127_3166801_1 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 600.0
MMD3_k127_3166801_10 - - - - 0.000000004266 64.0
MMD3_k127_3166801_11 KR domain - - - 0.0000102 49.0
MMD3_k127_3166801_2 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 405.0
MMD3_k127_3166801_3 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 388.0
MMD3_k127_3166801_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000002229 208.0
MMD3_k127_3166801_5 Pfam:DUF59 - - - 0.000000000000000000000000000000000000000000000000000000108 201.0
MMD3_k127_3166801_6 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000002825 194.0
MMD3_k127_3166801_7 PFAM Ribonuclease II K01147 - 3.1.13.1 0.00000000000000000000000000000000000000000003261 163.0
MMD3_k127_3166801_8 Transcriptional regulator - - - 0.00000000000000000000000000000003328 134.0
MMD3_k127_3166801_9 response regulator K07315 - 3.1.3.3 0.0000000000000000004196 94.0
MMD3_k127_3166877_0 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 529.0
MMD3_k127_3166877_1 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000001295 117.0
MMD3_k127_3166877_2 - - - - 0.00001053 49.0
MMD3_k127_317758_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 587.0
MMD3_k127_317758_1 PFAM DAHP synthetase I K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 385.0
MMD3_k127_317758_2 Multicopper oxidase - - - 0.000000000000000000000000000000000158 132.0
MMD3_k127_3185758_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 7.411e-266 828.0
MMD3_k127_3191070_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 379.0
MMD3_k127_3191070_1 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 357.0
MMD3_k127_3191070_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000002154 218.0
MMD3_k127_3194109_0 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 614.0
MMD3_k127_3194109_1 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000448 258.0
MMD3_k127_3194109_2 - - - - 0.000001425 57.0
MMD3_k127_3195737_0 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000001235 187.0
MMD3_k127_3195737_1 Protein of unknown function (DUF3667) - - - 0.00000000000000000000002884 109.0
MMD3_k127_3195737_2 thiamine biosynthesis protein ThiS K03154 - - 0.000000000000000004003 93.0
MMD3_k127_3199200_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 7.561e-201 637.0
MMD3_k127_3199200_1 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000002719 153.0
MMD3_k127_3199200_2 May be involved in the transport of PQQ or its precursor to the periplasm K00784 - 3.1.26.11 0.00000000000000000000000000000000000001086 145.0
MMD3_k127_3199315_0 PFAM AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000008798 151.0
MMD3_k127_3199315_1 Glycosyltransferase like family 2 - - - 0.00000000000000002656 82.0
MMD3_k127_3207534_0 lipopolysaccharide transport K22110 - - 1.234e-232 727.0
MMD3_k127_3207534_1 Pyridoxal-dependent decarboxylase K13745 - 4.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 580.0
MMD3_k127_3207534_2 SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 321.0
MMD3_k127_3207534_3 Multicopper oxidase K22350 - 1.16.3.3 0.000000000000000000000000000000000000000000001094 165.0
MMD3_k127_3209556_0 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 349.0
MMD3_k127_3209556_1 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.000000000000000000000000000000000000000000003599 167.0
MMD3_k127_3209556_2 KR domain - - - 0.00000000000000000000001278 101.0
MMD3_k127_3216838_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 384.0
MMD3_k127_3216838_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000005565 199.0
MMD3_k127_3216838_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000002154 128.0
MMD3_k127_3219530_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 377.0
MMD3_k127_3219530_1 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000000625 217.0
MMD3_k127_3223980_0 ATPase domain of DNA mismatch repair MUTS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 323.0
MMD3_k127_3223980_1 cell wall organization - - - 0.0002481 49.0
MMD3_k127_3226661_0 - - - - 0.00000000000000000000000000000000006739 143.0
MMD3_k127_3230547_0 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000437 123.0
MMD3_k127_3230547_1 TIGRFAM TonB K03832 - - 0.00000000000000000000000002074 117.0
MMD3_k127_324073_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000005777 141.0
MMD3_k127_324073_1 AsmA family K07289 - - 0.000000000000000000000000000000000226 151.0
MMD3_k127_324073_3 - - - - 0.0000000003141 66.0
MMD3_k127_324073_5 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0002068 51.0
MMD3_k127_3242793_0 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000004765 140.0
MMD3_k127_3242793_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000002989 121.0
MMD3_k127_3245612_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 593.0
MMD3_k127_3245612_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 371.0
MMD3_k127_3245612_2 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000002249 146.0
MMD3_k127_3245612_3 cellulose binding - - - 0.00000000008097 65.0
MMD3_k127_3255392_0 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000277 197.0
MMD3_k127_3255392_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000001231 161.0
MMD3_k127_3255392_2 TIGRFAM TonB K03832 - - 0.00000000000000000000000000000008933 126.0
MMD3_k127_3256113_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.146e-211 662.0
MMD3_k127_3257154_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 364.0
MMD3_k127_3257154_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000005914 166.0
MMD3_k127_3257154_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000001944 157.0
MMD3_k127_3257154_3 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000058 140.0
MMD3_k127_3258474_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000003357 244.0
MMD3_k127_3258474_1 Tetratricopeptide repeat - - - 0.000000000000576 78.0
MMD3_k127_3261197_0 UPF0210 protein K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 344.0
MMD3_k127_3261197_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001968 228.0
MMD3_k127_3277419_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 422.0
MMD3_k127_3277419_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 406.0
MMD3_k127_3277419_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 304.0
MMD3_k127_3277419_3 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000001833 271.0
MMD3_k127_3277419_4 outer membrane autotransporter barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001244 239.0
MMD3_k127_3277419_5 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002797 241.0
MMD3_k127_3277419_6 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000036 157.0
MMD3_k127_3279165_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 572.0
MMD3_k127_3279165_1 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 392.0
MMD3_k127_3279165_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 318.0
MMD3_k127_3279165_3 synthase - - - 0.000000003542 58.0
MMD3_k127_3279165_4 MacB-like periplasmic core domain - - - 0.000006792 48.0
MMD3_k127_3282317_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.292e-229 722.0
MMD3_k127_3282317_1 Enoyl-CoA hydratase/isomerase K01715,K07537 - 4.2.1.100,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 394.0
MMD3_k127_3282317_2 Belongs to the GSP D family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 357.0
MMD3_k127_3282317_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000003146 191.0
MMD3_k127_3282317_4 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000001111 180.0
MMD3_k127_3282317_5 - - - - 0.00000000000000000000000000000004624 132.0
MMD3_k127_3283679_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.25e-252 786.0
MMD3_k127_3286855_0 NmrA-like family - - - 0.00000000000000000000000000001948 123.0
MMD3_k127_3286855_1 BON domain - - - 0.00000000000000000000000000005132 127.0
MMD3_k127_3287681_0 PFAM Phage tail collar - - - 0.00000000000000000000000000000000000000181 150.0
MMD3_k127_3287681_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000002257 135.0
MMD3_k127_3288389_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000001755 153.0
MMD3_k127_3298563_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000001578 147.0
MMD3_k127_3298563_1 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000004227 114.0
MMD3_k127_3298563_2 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000000007393 86.0
MMD3_k127_3312178_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 333.0
MMD3_k127_3312178_1 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000000005076 109.0
MMD3_k127_3312178_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000008118 97.0
MMD3_k127_3312178_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000004027 90.0
MMD3_k127_3313698_0 response to heat K07090 - - 0.0000000000000000000000000000000000001728 147.0
MMD3_k127_3313698_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000917 118.0
MMD3_k127_3313698_2 Belongs to the ATPase B chain family K02109 - - 0.00000000000000000000002323 105.0
MMD3_k127_3320883_0 - - - - 0.000000000000000000000000000000008989 138.0
MMD3_k127_3320883_1 Putative adhesin - - - 0.00000000000000000000004192 102.0
MMD3_k127_3326240_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 529.0
MMD3_k127_3326240_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 377.0
MMD3_k127_3336608_0 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 293.0
MMD3_k127_3336608_1 Bacterial capsule synthesis protein PGA_cap - - - 0.000000000000000000000000000000003315 140.0
MMD3_k127_3336797_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 511.0
MMD3_k127_3338627_0 Glycosyl transferase, family 2 - - - 0.0 1409.0
MMD3_k127_3338627_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 419.0
MMD3_k127_3338627_2 - - - - 0.00000000000000000000000000000000000000000000001124 176.0
MMD3_k127_3343693_0 AIR synthase related protein, C-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 462.0
MMD3_k127_3343693_1 Protein of unknown function (DUF2393) - - - 0.00000000000000000000000000000001205 132.0
MMD3_k127_3343693_2 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000002023 126.0
MMD3_k127_3346551_0 Carboxypeptidase regulatory-like domain - - - 4.308e-234 743.0
MMD3_k127_3346551_1 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000001361 202.0
MMD3_k127_3346551_2 - - - - 0.00000000000000000001118 94.0
MMD3_k127_3348017_0 ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 449.0
MMD3_k127_3354418_0 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 292.0
MMD3_k127_3354418_1 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000001056 226.0
MMD3_k127_3354418_2 PFAM MaoC domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000000000000002838 197.0
MMD3_k127_3354418_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000000000000000002091 164.0
MMD3_k127_3354418_4 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000001377 127.0
MMD3_k127_3354418_5 - - - - 0.00000000000000000004704 102.0
MMD3_k127_3358849_0 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 312.0
MMD3_k127_3358849_1 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000001268 169.0
MMD3_k127_3358849_2 Putative zinc-finger - - - 0.0000000000000000000000000003636 115.0
MMD3_k127_3358849_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000005094 74.0
MMD3_k127_3360338_0 cellulose binding - - - 5.222e-243 791.0
MMD3_k127_3360338_1 TIGRFAM Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 542.0
MMD3_k127_3360338_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 537.0
MMD3_k127_3360338_3 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 297.0
MMD3_k127_3360338_4 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000001056 243.0
MMD3_k127_3360338_5 - - - - 0.00000000000000000000000000000000000000000000000000000004255 207.0
MMD3_k127_3360338_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000001091 145.0
MMD3_k127_3360338_7 Tetratricopeptide repeat - - - 0.0004062 51.0
MMD3_k127_3368034_0 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 368.0
MMD3_k127_3368034_1 - - - - 0.0000000000000001143 79.0
MMD3_k127_3368248_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 522.0
MMD3_k127_3372320_0 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000004918 160.0
MMD3_k127_3372320_1 serine-type peptidase activity - - - 0.00000000000000000000000000001357 128.0
MMD3_k127_3372320_2 Peptidase family M48 - - - 0.00000000000005502 82.0
MMD3_k127_3373797_0 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000002195 253.0
MMD3_k127_3373797_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000004322 234.0
MMD3_k127_3373797_2 Belongs to the ompA family K03640 - - 0.0001551 51.0
MMD3_k127_3375686_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000008699 190.0
MMD3_k127_3375686_1 PFAM glycosyl transferase group 1 - - - 0.000009598 49.0
MMD3_k127_3375686_2 O-Antigen ligase - - - 0.0003189 51.0
MMD3_k127_337715_0 ATP-dependent DNA helicase RecG K03655 - 3.6.4.12 2.915e-321 1000.0
MMD3_k127_3379970_0 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 469.0
MMD3_k127_3379970_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000001746 226.0
MMD3_k127_3379970_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000002033 186.0
MMD3_k127_3379970_3 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000002928 168.0
MMD3_k127_3379970_4 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000001354 141.0
MMD3_k127_3379970_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000294 147.0
MMD3_k127_3379970_6 Membrane - - - 0.00000000000000000000000000000000006703 138.0
MMD3_k127_3379970_7 AntiSigma factor - - - 0.000000000000000000000000000000001519 140.0
MMD3_k127_3379970_8 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000001507 115.0
MMD3_k127_3387388_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 391.0
MMD3_k127_3387388_1 Tetratricopeptide repeat - - - 0.000000000000000000000001654 106.0
MMD3_k127_3387388_2 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000272 54.0
MMD3_k127_3391000_0 Serine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 596.0
MMD3_k127_3391000_1 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 515.0
MMD3_k127_3391000_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000004442 111.0
MMD3_k127_3391000_3 InterPro IPR007367 - - - 0.0000000000000000000432 91.0
MMD3_k127_3391000_4 - - - - 0.00000000000000000009413 91.0
MMD3_k127_339843_0 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.000000000000000000000000006252 122.0
MMD3_k127_339843_1 AAA domain - - - 0.00004461 47.0
MMD3_k127_3405241_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 1.211e-319 980.0
MMD3_k127_3405241_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 2.871e-221 691.0
MMD3_k127_3408398_0 Belongs to the HesB IscA family - - - 0.0000000000000000000000000000000000000000000000000000001068 196.0
MMD3_k127_3408398_1 - - - - 0.000000000000000000000000000000000000000002315 165.0
MMD3_k127_3408398_2 - - - - 0.0000000000000001536 87.0
MMD3_k127_3408398_3 - K02664 - - 0.000000000003803 73.0
MMD3_k127_3409179_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000006184 150.0
MMD3_k127_3409179_1 Tetratricopeptide repeat - - - 0.00000000000000000000000004279 112.0
MMD3_k127_3409179_2 Tetratricopeptide repeat - - - 0.00000000000000000000000891 111.0
MMD3_k127_3409495_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 343.0
MMD3_k127_3409495_1 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 315.0
MMD3_k127_3409495_2 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009644 269.0
MMD3_k127_3409495_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000017 244.0
MMD3_k127_3409495_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000001727 160.0
MMD3_k127_34095_0 Domain of unknown function (DUF1287) K09974 - - 0.000000000000000001751 93.0
MMD3_k127_34095_1 - - - - 0.000000000000000815 78.0
MMD3_k127_34095_2 ABC-2 family transporter protein - - - 0.000000000001533 73.0
MMD3_k127_34095_3 - - - - 0.00000000001153 73.0
MMD3_k127_340973_0 Peptidase M16 - - - 0.0 1136.0
MMD3_k127_3413077_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000004312 59.0
MMD3_k127_3416656_0 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 302.0
MMD3_k127_3416656_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007215 239.0
MMD3_k127_3416656_2 photosynthesis - - - 0.0000000000000000000000000000000000000000000000000000001343 208.0
MMD3_k127_342878_0 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 - 1.2.1.88 4.311e-197 621.0
MMD3_k127_342878_1 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 - 1.2.1.88 0.000009607 47.0
MMD3_k127_34310_0 Ammonium Transporter K03320 - - 2.158e-226 710.0
MMD3_k127_34310_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000001919 223.0
MMD3_k127_34310_2 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000006769 183.0
MMD3_k127_3435935_0 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 353.0
MMD3_k127_3435935_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000001721 135.0
MMD3_k127_3435935_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000003638 92.0
MMD3_k127_3437303_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1232.0
MMD3_k127_3440546_0 acetylesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 395.0
MMD3_k127_3440546_1 ubiquinone menaquinone biosynthesis methyltransferase - - - 0.0000000000000000000000004708 109.0
MMD3_k127_3441865_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 392.0
MMD3_k127_3441865_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000003117 109.0
MMD3_k127_3441865_2 response regulator, receiver - - - 0.0000000000639 71.0
MMD3_k127_3445500_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000002962 188.0
MMD3_k127_3445500_1 Histidine kinase K02478 - 2.7.13.3 0.0000000000000000000000000000000000000000003435 163.0
MMD3_k127_3464571_0 TrkA-C domain K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 376.0
MMD3_k127_3464571_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 292.0
MMD3_k127_3464571_2 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000198 254.0
MMD3_k127_3464974_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.04e-322 996.0
MMD3_k127_3466278_0 Gaf domain - - - 0.00000000000000000000000000000000000000000000000000000000000002699 225.0
MMD3_k127_3466278_1 Belongs to the peptidase M48B family - - - 0.00006152 53.0
MMD3_k127_3469812_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 396.0
MMD3_k127_3469812_1 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000002058 230.0
MMD3_k127_3469812_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000007318 118.0
MMD3_k127_3469812_3 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0000000000000615 75.0
MMD3_k127_3473824_0 Carboxypeptidase regulatory-like domain - - - 0.00009202 51.0
MMD3_k127_3474162_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 469.0
MMD3_k127_3474162_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000002664 124.0
MMD3_k127_3474162_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000007539 64.0
MMD3_k127_348587_0 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 589.0
MMD3_k127_348587_1 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 550.0
MMD3_k127_348587_2 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000004277 164.0
MMD3_k127_348587_3 SMART Transport-associated and nodulation - - - 0.0002417 50.0
MMD3_k127_3490854_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 547.0
MMD3_k127_3490854_1 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 315.0
MMD3_k127_3490854_2 Domain of unknown function (DUF4440) - - - 0.00000000000000000000004338 106.0
MMD3_k127_3490854_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000818 81.0
MMD3_k127_3491260_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 355.0
MMD3_k127_3491260_1 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000001206 154.0
MMD3_k127_3491260_2 Rubrerythrin - - - 0.000000000000000003269 88.0
MMD3_k127_3495130_0 PFAM peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 337.0
MMD3_k127_3495130_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000001609 159.0
MMD3_k127_3495130_2 acetyltransferase - - - 0.0000000000000000000000000000001891 129.0
MMD3_k127_3495130_3 geranyltranstransferase activity - - - 0.0000000000000000000000000002769 118.0
MMD3_k127_3500343_0 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 587.0
MMD3_k127_3500343_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 333.0
MMD3_k127_3500343_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000007452 224.0
MMD3_k127_3500343_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000002581 146.0
MMD3_k127_3512873_0 Arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 496.0
MMD3_k127_3512873_1 class II (D K K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 291.0
MMD3_k127_3512873_2 - - - - 0.00000000000000000000009957 105.0
MMD3_k127_3525781_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 469.0
MMD3_k127_3525781_1 pfkB family carbohydrate kinase - - - 0.0000000000006201 74.0
MMD3_k127_3526826_0 amino acid transport K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 529.0
MMD3_k127_3526826_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 372.0
MMD3_k127_3526826_2 methylamine metabolic process K15977 - - 0.000000000000000000000000003896 113.0
MMD3_k127_3527721_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 328.0
MMD3_k127_3527721_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000005696 70.0
MMD3_k127_35302_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 4.199e-252 785.0
MMD3_k127_3534678_0 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000004752 248.0
MMD3_k127_3534678_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000009555 170.0
MMD3_k127_3534678_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000002089 115.0
MMD3_k127_3539292_0 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 427.0
MMD3_k127_3539292_1 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000002002 104.0
MMD3_k127_3539292_2 Protein of unknown function (DUF3606) - - - 0.0000000000001075 74.0
MMD3_k127_3539292_3 Formamidopyrimidine-DNA glycosylase N-terminal domain K10563 - 3.2.2.23,4.2.99.18 0.0006291 42.0
MMD3_k127_35550_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
MMD3_k127_35550_1 YtxH-like protein - - - 0.000000000000000000000000002969 114.0
MMD3_k127_35550_2 - - - - 0.00000000000008417 78.0
MMD3_k127_3556459_0 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000005885 141.0
MMD3_k127_3556459_1 TM2 domain - - - 0.0000000000001258 79.0
MMD3_k127_3556459_2 Domain of unknown function (DUF4339) - - - 0.0000000000005573 74.0
MMD3_k127_3558451_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.467e-293 910.0
MMD3_k127_3558451_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 543.0
MMD3_k127_3558451_2 Outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000314 280.0
MMD3_k127_3558451_3 WD40-like Beta Propeller K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000002288 236.0
MMD3_k127_3558451_4 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000001143 206.0
MMD3_k127_3558451_6 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000001665 77.0
MMD3_k127_3566953_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 472.0
MMD3_k127_3566953_1 Putative glycosyl hydrolase domain - - - 0.00002795 50.0
MMD3_k127_3567042_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000782 142.0
MMD3_k127_3567042_1 - - - - 0.000000000003674 70.0
MMD3_k127_3567215_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 4.384e-214 675.0
MMD3_k127_3567215_1 plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000017 191.0
MMD3_k127_3567215_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000001955 146.0
MMD3_k127_3574369_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003097 274.0
MMD3_k127_3574369_1 PFAM Smr protein MutS2 - - - 0.000000000000000000006683 96.0
MMD3_k127_357496_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 583.0
MMD3_k127_357496_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 374.0
MMD3_k127_357496_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000004288 164.0
MMD3_k127_3583597_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 310.0
MMD3_k127_3583597_1 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000176 266.0
MMD3_k127_3583597_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000008439 138.0
MMD3_k127_3583597_4 - - - - 0.00002848 47.0
MMD3_k127_3585803_0 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 382.0
MMD3_k127_3585803_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000007279 213.0
MMD3_k127_3585803_2 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00001098 48.0
MMD3_k127_3591815_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001427 281.0
MMD3_k127_3594528_0 - - - - 0.000000000000000000000000000000000000000000000000000000002772 216.0
MMD3_k127_3594528_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000003461 85.0
MMD3_k127_3594528_2 L,D-transpeptidase catalytic domain - - - 0.000000000002695 69.0
MMD3_k127_3602490_0 PFAM Conserved region in glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 348.0
MMD3_k127_3605760_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 505.0
MMD3_k127_3606663_0 Likely ribonuclease with RNase H fold. K07447 - - 0.000000000000000000000000000000000000000000005395 167.0
MMD3_k127_3606663_1 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000004496 141.0
MMD3_k127_3606758_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 540.0
MMD3_k127_3606758_1 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005782 284.0
MMD3_k127_3606758_2 AAA ATPase domain - - - 0.0000004257 52.0
MMD3_k127_3615736_0 Type II/IV secretion system protein K02669 - - 8.851e-217 677.0
MMD3_k127_3615736_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000002573 241.0
MMD3_k127_3615736_2 RecX family K03565 - - 0.000000000000000000000000000000000000000001382 162.0
MMD3_k127_3615736_3 Cysteine-rich secretory protein family - - - 0.000000000000000000000000006104 121.0
MMD3_k127_3615736_4 Cysteine-rich secretory protein family - - - 0.00000000000002255 79.0
MMD3_k127_3622934_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008421 510.0
MMD3_k127_3627488_0 Major facilitator Superfamily K08152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 420.0
MMD3_k127_3627488_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000115 242.0
MMD3_k127_3627488_2 Cephalosporin hydroxylase - - - 0.0000000000000000000000000000000000000000000747 175.0
MMD3_k127_3627488_3 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000002552 151.0
MMD3_k127_3628307_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 591.0
MMD3_k127_3634387_0 PFAM Cytochrome c assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 498.0
MMD3_k127_3634387_1 PFAM response regulator receiver - - - 0.00000000000000004335 82.0
MMD3_k127_3648277_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 340.0
MMD3_k127_3648277_1 Participates in transcription elongation, termination and antitermination - - - 0.0000000000000000000000000000000000000000000000000000003202 201.0
MMD3_k127_3653389_0 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 313.0
MMD3_k127_3653389_1 TIGRFAM polysaccharide chain length determinant protein, PEP-CTERM locus subfamily - - - 0.000000000001548 70.0
MMD3_k127_3661608_0 - - - - 0.0000000000003462 72.0
MMD3_k127_3661608_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.00002691 55.0
MMD3_k127_3662901_0 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 568.0
MMD3_k127_3662901_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 307.0
MMD3_k127_3662901_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001559 276.0
MMD3_k127_3662901_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000001915 205.0
MMD3_k127_3662901_4 CHAT domain - - - 0.00000000000000000000000000000000000000000000000356 182.0
MMD3_k127_3668418_0 Pro-kumamolisin, activation domain K08677 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 297.0
MMD3_k127_3668418_1 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000000000003717 146.0
MMD3_k127_3668418_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000002356 113.0
MMD3_k127_3668418_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000002999 63.0
MMD3_k127_366943_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007501 256.0
MMD3_k127_366943_1 RDD family - - - 0.00000000000000000000000000000002607 135.0
MMD3_k127_3673508_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 408.0
MMD3_k127_3673508_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000004379 88.0
MMD3_k127_3679524_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.63e-283 887.0
MMD3_k127_3679524_1 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000000000000000000000001235 193.0
MMD3_k127_3679524_2 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000005285 92.0
MMD3_k127_3679754_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.793e-291 907.0
MMD3_k127_3679754_1 PFAM peptidase U62 modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 528.0
MMD3_k127_3679754_2 PFAM peptidase U62 modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 429.0
MMD3_k127_3679754_3 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000008174 194.0
MMD3_k127_3679754_4 Domain of unknown function (DUF4279) - - - 0.0000000000003898 74.0
MMD3_k127_3679754_5 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000004158 66.0
MMD3_k127_3679754_7 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.0005491 44.0
MMD3_k127_3684019_0 Bacterial regulatory protein, Fis family - - - 3.768e-209 661.0
MMD3_k127_3685805_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000002018 223.0
MMD3_k127_3685805_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000007365 56.0
MMD3_k127_3689958_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 2.457e-209 655.0
MMD3_k127_3689958_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 336.0
MMD3_k127_3689958_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004988 287.0
MMD3_k127_3694450_0 KAP family P-loop domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009029 276.0
MMD3_k127_3694450_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000003822 86.0
MMD3_k127_3695808_0 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001754 290.0
MMD3_k127_3695808_1 Hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000005992 141.0
MMD3_k127_3702228_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 537.0
MMD3_k127_3702228_1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase - - - 0.000000000000000000000198 100.0
MMD3_k127_3716861_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.95e-283 876.0
MMD3_k127_3716861_1 - - - - 0.00000000001253 75.0
MMD3_k127_3718678_0 Aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000006425 209.0
MMD3_k127_3718678_1 Sortilin, neurotensin receptor 3, - - - 0.000000000000000005534 86.0
MMD3_k127_3727572_0 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 472.0
MMD3_k127_3727572_1 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000007568 187.0
MMD3_k127_3727572_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000002562 97.0
MMD3_k127_373020_0 Acetamidase/Formamidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 471.0
MMD3_k127_373020_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003028 270.0
MMD3_k127_373020_2 - - - - 0.000000000000000000000000000000005067 136.0
MMD3_k127_3734635_0 Peptidase dimerisation domain - - - 8.98e-224 704.0
MMD3_k127_3734635_1 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000001044 89.0
MMD3_k127_3741434_0 oxidoreductase activity - - - 0.0000000000000000000000000000000001127 143.0
MMD3_k127_3741434_1 - - - - 0.0000000000000000000000000001711 119.0
MMD3_k127_3742310_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000006527 222.0
MMD3_k127_3742310_1 - - - - 0.0000000000000000000000000000000000000000003027 167.0
MMD3_k127_3742310_2 SCO1 SenC K07152 - - 0.0000000000000000000002996 99.0
MMD3_k127_3742532_0 PFAM Polysaccharide export protein - - - 3.897e-240 771.0
MMD3_k127_3742532_1 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 468.0
MMD3_k127_3742532_2 all-trans-retinol 13,14-reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 341.0
MMD3_k127_3742532_3 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004123 275.0
MMD3_k127_3742532_4 SIS domain K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000606 160.0
MMD3_k127_3742532_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000002527 78.0
MMD3_k127_3751280_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000004499 225.0
MMD3_k127_3751280_1 - - - - 0.00000000000000000000000000000000000000000000000000000000006465 215.0
MMD3_k127_3751280_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000001068 183.0
MMD3_k127_3751280_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000007516 163.0
MMD3_k127_3751280_4 Putative zinc-finger K03088 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000001988 164.0
MMD3_k127_3752979_0 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 489.0
MMD3_k127_3752979_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000004825 115.0
MMD3_k127_3755369_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000473 277.0
MMD3_k127_3755369_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000001696 152.0
MMD3_k127_3757955_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 363.0
MMD3_k127_3758304_0 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 465.0
MMD3_k127_3758304_1 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 458.0
MMD3_k127_3758304_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 323.0
MMD3_k127_3758304_3 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000000167 149.0
MMD3_k127_3760438_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 408.0
MMD3_k127_3760438_1 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001238 223.0
MMD3_k127_3760438_2 chaperone-mediated protein folding - - - 0.00000000000001689 74.0
MMD3_k127_3760438_3 - - - - 0.0000000000003201 75.0
MMD3_k127_3761932_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 4.572e-198 622.0
MMD3_k127_3761932_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 389.0
MMD3_k127_3761932_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000557 276.0
MMD3_k127_3761932_3 Helix-hairpin-helix motif - - - 0.0000000000000000000008324 100.0
MMD3_k127_3761932_4 Tetratricopeptide repeat - - - 0.00000000004445 66.0
MMD3_k127_3772792_0 Heat shock 70 kDa protein K04043 - - 1.971e-230 717.0
MMD3_k127_3772792_1 His Kinase A (phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 553.0
MMD3_k127_3772792_3 Part of the ABC transporter complex PstSACB involved in phosphate import - - - 0.0000000000000000000000000000002084 131.0
MMD3_k127_3772792_4 diguanylate cyclase - - - 0.000000000000000000000001378 109.0
MMD3_k127_3773309_0 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001946 273.0
MMD3_k127_3773309_1 Thiol disulfide interchange protein K04084,K08344 - 1.8.1.8 0.00000000000000000000000000000000000000000001231 173.0
MMD3_k127_3773309_2 Mitochondrial small ribosomal subunit Rsm22 - - - 0.000000000000000000000000000000001836 135.0
MMD3_k127_3787418_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000207 149.0
MMD3_k127_3787418_1 - - - - 0.000000000000000000000009133 111.0
MMD3_k127_3787418_2 alpha beta alpha domain I - - - 0.00000000000000483 76.0
MMD3_k127_3804104_0 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 295.0
MMD3_k127_3804104_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001734 278.0
MMD3_k127_3810212_0 MacB-like periplasmic core domain - - - 1.71e-224 722.0
MMD3_k127_3817698_0 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 403.0
MMD3_k127_3817698_1 Transglycosylase associated protein - - - 0.0000002829 57.0
MMD3_k127_381910_0 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 428.0
MMD3_k127_381910_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 294.0
MMD3_k127_3819649_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.09e-304 944.0
MMD3_k127_3819649_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000003148 147.0
MMD3_k127_382245_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 541.0
MMD3_k127_382245_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000001254 117.0
MMD3_k127_3832448_0 Peptidase family M13 K01415,K07386 - 3.4.24.71 1.538e-314 977.0
MMD3_k127_3832448_1 Peptidase family M49 - - - 2.288e-229 728.0
MMD3_k127_3832448_2 - - - - 0.000000000000000000000000002513 116.0
MMD3_k127_3834648_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000002198 209.0
MMD3_k127_3834648_1 PFAM response regulator receiver K07665 - - 0.00000000000000000000000001563 109.0
MMD3_k127_3835535_0 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 516.0
MMD3_k127_3835535_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 476.0
MMD3_k127_3835535_2 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 283.0
MMD3_k127_3839851_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 573.0
MMD3_k127_3839851_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 297.0
MMD3_k127_3839851_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000001142 194.0
MMD3_k127_3839851_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000001066 53.0
MMD3_k127_3842511_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 458.0
MMD3_k127_3842511_1 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000001522 179.0
MMD3_k127_3847994_0 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 341.0
MMD3_k127_3847994_1 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 293.0
MMD3_k127_3847994_2 Redoxin - - - 0.000000000000000000000000000000000000005895 151.0
MMD3_k127_3847994_3 PA domain - - - 0.0000000000000000001012 93.0
MMD3_k127_3847994_4 Type II transport protein GspH K08084 - - 0.0000003848 59.0
MMD3_k127_3847994_5 Pilus assembly protein PilX K02673 - - 0.000808 52.0
MMD3_k127_3849602_0 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 387.0
MMD3_k127_3849602_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 315.0
MMD3_k127_3849602_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003451 256.0
MMD3_k127_3849602_3 MobA-Related Protein K07141,K19190 - 1.1.1.328,2.7.7.76 0.000000000000000000000000000000000000000000000000000000000000000000005111 241.0
MMD3_k127_3849602_4 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000000000000000000000000000000000000000006038 222.0
MMD3_k127_3861268_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 578.0
MMD3_k127_3861268_1 CHAT domain - - - 0.000000000000000006146 85.0
MMD3_k127_3864156_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 460.0
MMD3_k127_3864156_1 PFAM von Willebrand factor type A - - - 0.000000000000000000000000002159 113.0
MMD3_k127_3864156_2 helix_turn_helix ASNC type - - - 0.000000000000000000000000144 109.0
MMD3_k127_3868987_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 525.0
MMD3_k127_3868987_1 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 529.0
MMD3_k127_3868987_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 445.0
MMD3_k127_3868987_3 ribonuclease, Rne Rng family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 334.0
MMD3_k127_3868987_4 DNA-binding transcription factor activity K15973 - - 0.00000000000000000000000000000000000001406 149.0
MMD3_k127_3881098_0 Membrane dipeptidase (Peptidase family M19) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 414.0
MMD3_k127_3881098_1 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 326.0
MMD3_k127_3881098_2 Cupin - - - 0.00000000000000000000000000000000000000000013 165.0
MMD3_k127_3881098_3 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.00000000000000001957 84.0
MMD3_k127_3886426_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07789 - - 0.0 1268.0
MMD3_k127_3886426_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 6.21e-217 685.0
MMD3_k127_3886426_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000009271 69.0
MMD3_k127_3892362_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 332.0
MMD3_k127_3892362_1 - - - - 0.000001276 57.0
MMD3_k127_3892774_0 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.0 1031.0
MMD3_k127_3892774_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 500.0
MMD3_k127_3892774_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 403.0
MMD3_k127_3892774_3 Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000009551 126.0
MMD3_k127_3892774_4 - - - - 0.0000000000000000000000000000001173 129.0
MMD3_k127_3892774_5 TIGRFAM Addiction module antidote protein, HigA K21498 - - 0.0000000000000000000000000000006979 124.0
MMD3_k127_3894836_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 602.0
MMD3_k127_3894836_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001153 298.0
MMD3_k127_3894836_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000001911 206.0
MMD3_k127_3894836_3 domain protein K20276 - - 0.000000000000000000002733 109.0
MMD3_k127_3916804_0 5'-3' exonuclease, N-terminal resolvase-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 473.0
MMD3_k127_3916804_1 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 432.0
MMD3_k127_3916804_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 351.0
MMD3_k127_3916804_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000008714 149.0
MMD3_k127_3928176_0 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009996 272.0
MMD3_k127_3928176_1 - - - - 0.0000000000000000000000000000000000000000000004304 176.0
MMD3_k127_3928176_2 PBS lyase HEAT-like repeat - - - 0.0000000000000000000000000000154 129.0
MMD3_k127_3928176_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000006792 84.0
MMD3_k127_3930412_0 Putative adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007086 304.0
MMD3_k127_3930412_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000006398 248.0
MMD3_k127_3930412_2 - - - - 0.00000000000000000000000000000000001043 143.0
MMD3_k127_3930412_3 Winged helix DNA-binding domain - - - 0.000000000000000000000000000002059 123.0
MMD3_k127_3935852_0 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 293.0
MMD3_k127_3935852_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000001484 155.0
MMD3_k127_3937485_0 peptidase K07386 - - 1.118e-284 891.0
MMD3_k127_3937485_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000002241 126.0
MMD3_k127_3937485_2 Membrane - - - 0.000000000000000000000006925 113.0
MMD3_k127_3937485_3 - - - - 0.000001098 57.0
MMD3_k127_3937485_4 - - - - 0.000001366 59.0
MMD3_k127_3937485_5 - - - - 0.0001269 48.0
MMD3_k127_39429_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.638e-199 634.0
MMD3_k127_39429_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000006284 122.0
MMD3_k127_3949264_0 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 483.0
MMD3_k127_3950674_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 360.0
MMD3_k127_3950674_1 Protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.00000000000000000000000000000000000002712 146.0
MMD3_k127_395945_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 594.0
MMD3_k127_395945_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 537.0
MMD3_k127_395945_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 460.0
MMD3_k127_395945_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 319.0
MMD3_k127_395945_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 305.0
MMD3_k127_395945_5 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000103 131.0
MMD3_k127_3960145_0 PFAM Mannosyl oligosaccharide glucosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 571.0
MMD3_k127_3960145_1 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 353.0
MMD3_k127_3963277_0 Proposed role in polysaccahride synthesis K07077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 462.0
MMD3_k127_3963277_1 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000000000004056 196.0
MMD3_k127_3963277_2 Domain of unknown function (DUF4337) - - - 0.0000000000000000000000009538 111.0
MMD3_k127_3963986_0 56kDa selenium binding protein (SBP56) K17285 - - 1.065e-235 736.0
MMD3_k127_3963986_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 487.0
MMD3_k127_3963986_2 - - - - 0.000000000000000000000000000000000000000000009277 166.0
MMD3_k127_3963986_3 - - - - 0.0000001454 56.0
MMD3_k127_396608_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 460.0
MMD3_k127_396608_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000001151 150.0
MMD3_k127_3966833_0 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 583.0
MMD3_k127_3966833_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 421.0
MMD3_k127_3970978_0 - - - - 0.0000000000000000000000000000000000000000006993 171.0
MMD3_k127_3970978_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000002352 128.0
MMD3_k127_3970978_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000002959 88.0
MMD3_k127_3970978_3 - - - - 0.000000000000000004886 94.0
MMD3_k127_3974224_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.915e-271 846.0
MMD3_k127_3975625_0 PhoQ Sensor K07640 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000148 284.0
MMD3_k127_3976684_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 304.0
MMD3_k127_3976684_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000004408 141.0
MMD3_k127_3976684_2 VanZ like family - - - 0.000000000000000000000000005975 116.0
MMD3_k127_397749_0 E1-E2 ATPase - - - 3.556e-218 688.0
MMD3_k127_397749_1 Multidrug transporter MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000001555 219.0
MMD3_k127_3980181_0 nucleotide metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 303.0
MMD3_k127_3980181_1 - - - - 0.0000000000000000000000000001119 122.0
MMD3_k127_3980181_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000007302 116.0
MMD3_k127_3994473_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 411.0
MMD3_k127_3994473_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.0000000000000000000000002173 108.0
MMD3_k127_3996804_0 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 406.0
MMD3_k127_3996804_1 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000001593 59.0
MMD3_k127_399736_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 560.0
MMD3_k127_399736_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000001245 70.0
MMD3_k127_4001069_0 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000004126 244.0
MMD3_k127_4001069_1 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000005783 146.0
MMD3_k127_4001069_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000528 103.0
MMD3_k127_4001069_3 Glyoxalase-like domain K04750 - - 0.0000000000000001933 79.0
MMD3_k127_4001069_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0002646 46.0
MMD3_k127_4005401_0 Peptidase, M20 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 315.0
MMD3_k127_4006857_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 464.0
MMD3_k127_4008504_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 4.892e-267 833.0
MMD3_k127_4008504_1 cytochrome - - - 0.00000000000000000000000000000000000000000007272 175.0
MMD3_k127_4008504_2 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000007069 141.0
MMD3_k127_4008504_3 MerR, DNA binding - - - 0.000000000000000000000000003559 118.0
MMD3_k127_4014412_0 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 416.0
MMD3_k127_401897_0 PFAM Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000001594 250.0
MMD3_k127_401897_1 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000009363 175.0
MMD3_k127_4031129_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 340.0
MMD3_k127_4031129_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001383 278.0
MMD3_k127_4031129_2 AntiSigma factor - - - 0.0000000000000000000000000000000000000000000000004836 182.0
MMD3_k127_4031136_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 450.0
MMD3_k127_4031136_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002929 241.0
MMD3_k127_4037642_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 550.0
MMD3_k127_4037642_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 520.0
MMD3_k127_4037642_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 476.0
MMD3_k127_4037642_3 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 296.0
MMD3_k127_4037642_4 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000001177 209.0
MMD3_k127_4043633_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 597.0
MMD3_k127_4043633_1 PFAM 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 584.0
MMD3_k127_4043633_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000005229 259.0
MMD3_k127_4043633_3 PFAM regulatory protein, MarR - - - 0.0000000000000000000000002253 116.0
MMD3_k127_4069325_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 421.0
MMD3_k127_4069325_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000001198 181.0
MMD3_k127_4069325_2 chaperone-mediated protein folding - - - 0.00000000000000000000000000005262 123.0
MMD3_k127_4069405_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1047.0
MMD3_k127_4069405_1 Tetratricopeptide repeat - - - 0.00000004849 63.0
MMD3_k127_4070402_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001107 258.0
MMD3_k127_4070402_1 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000005507 139.0
MMD3_k127_4071736_0 4-alpha-D-((1- 4)-alpha-D-glucano)trehalose trehalohydrolase K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000167 263.0
MMD3_k127_4074863_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 362.0
MMD3_k127_4074863_1 Alpha amylase - - - 0.000000000000000000000000002472 115.0
MMD3_k127_4076636_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000001859 252.0
MMD3_k127_4076636_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000004157 244.0
MMD3_k127_407880_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 398.0
MMD3_k127_407880_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 350.0
MMD3_k127_407880_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000001381 62.0
MMD3_k127_407880_3 Capsule assembly protein Wzi - - - 0.000004284 53.0
MMD3_k127_4085560_0 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 313.0
MMD3_k127_4085560_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005776 270.0
MMD3_k127_4085560_2 SPFH domain / Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009815 259.0
MMD3_k127_4085560_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000007288 254.0
MMD3_k127_4089664_0 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 348.0
MMD3_k127_4090669_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 610.0
MMD3_k127_4090669_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 298.0
MMD3_k127_4090669_2 - - - - 0.0000000000000000000000000000000000000000002276 162.0
MMD3_k127_4090669_3 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000000551 102.0
MMD3_k127_4090669_4 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000008915 94.0
MMD3_k127_4090669_5 - - - - 0.0000000000000001093 83.0
MMD3_k127_4090669_6 FR47-like protein - - - 0.0001278 45.0
MMD3_k127_4091832_0 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001976 250.0
MMD3_k127_4091832_1 Peptidase dimerisation domain - - - 0.00000000000001209 81.0
MMD3_k127_40971_0 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 407.0
MMD3_k127_40971_1 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009774 263.0
MMD3_k127_40971_2 nitrous-oxide reductase activity - - - 0.000001276 57.0
MMD3_k127_4099874_0 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 291.0
MMD3_k127_4099874_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000008104 238.0
MMD3_k127_4099874_2 Beta-lactamase K01286 - 3.4.16.4 0.0000000000000000000000000000000003091 137.0
MMD3_k127_4105034_0 Domain of unknown function (DUF4349) - - - 0.0000000000000000000007454 107.0
MMD3_k127_4117595_0 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 313.0
MMD3_k127_4117595_1 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 290.0
MMD3_k127_4117595_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000000000000000000000001316 191.0
MMD3_k127_4117595_3 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000399 185.0
MMD3_k127_4118720_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.565e-292 912.0
MMD3_k127_4118720_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 380.0
MMD3_k127_4120986_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 344.0
MMD3_k127_4120986_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000002232 145.0
MMD3_k127_412101_0 NHLM bacteriocin system ABC transporter, peptidase ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 430.0
MMD3_k127_4124037_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 457.0
MMD3_k127_4124037_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 414.0
MMD3_k127_4124037_2 DinB family - - - 0.0000000000000000000000000000000000000005115 151.0
MMD3_k127_4127000_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1305.0
MMD3_k127_4127000_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000009085 84.0
MMD3_k127_4127000_2 7TM receptor with intracellular HD hydrolase - - - 0.000000000002032 78.0
MMD3_k127_4127000_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0004391 44.0
MMD3_k127_4135034_0 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 548.0
MMD3_k127_4135034_1 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 443.0
MMD3_k127_4135034_2 Belongs to the carbamoyltransferase HypF family K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 401.0
MMD3_k127_4135719_0 PFAM Uncharacterised conserved protein UCP033563 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 464.0
MMD3_k127_4135719_1 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 401.0
MMD3_k127_4135719_2 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000001002 76.0
MMD3_k127_4151701_0 pilus assembly protein PilW K02672 - - 0.00000000000002539 83.0
MMD3_k127_4151701_1 Pilus assembly protein PilX - - - 0.00000002794 61.0
MMD3_k127_4157497_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003139 284.0
MMD3_k127_4157497_1 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000002467 70.0
MMD3_k127_4159515_0 Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively K00140 GO:0003674,GO:0003824,GO:0004491,GO:0006082,GO:0006520,GO:0006573,GO:0006574,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 369.0
MMD3_k127_4159515_1 Putative cyclase - GO:0003674,GO:0003824,GO:0005488,GO:0016787,GO:0016810,GO:0016812,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 365.0
MMD3_k127_4161489_0 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001343 258.0
MMD3_k127_4161489_1 Universal stress protein - - - 0.00000000000000000000000000000007512 134.0
MMD3_k127_4168173_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 495.0
MMD3_k127_4168173_1 hydroperoxide reductase activity - - - 0.00000000002853 66.0
MMD3_k127_4170471_0 PFAM Di-haem cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 524.0
MMD3_k127_4170471_1 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000006982 76.0
MMD3_k127_4172879_0 lipopolysaccharide transport K22110 - - 1.254e-283 882.0
MMD3_k127_4172879_1 lipopolysaccharide transport K22110 - - 0.0000000000000000003745 87.0
MMD3_k127_4172879_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000002637 75.0
MMD3_k127_4180823_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 1.247e-210 666.0
MMD3_k127_4180823_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 487.0
MMD3_k127_4180823_2 ABC transporter K02003 - - 0.00000000000000001983 82.0
MMD3_k127_4182553_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 352.0
MMD3_k127_4182553_1 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 285.0
MMD3_k127_4182553_2 - - - - 0.0000000000000000000000000000000005634 141.0
MMD3_k127_4182553_3 PIN domain - - - 0.000000000000000000000000000000008954 132.0
MMD3_k127_4182553_4 positive regulation of growth - - - 0.000000000000000008043 84.0
MMD3_k127_4189032_0 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000000008149 140.0
MMD3_k127_4189032_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000232 88.0
MMD3_k127_4189032_2 - - - - 0.0000002029 61.0
MMD3_k127_4189032_3 - - - - 0.0000764 51.0
MMD3_k127_4190817_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 1.197e-199 627.0
MMD3_k127_4190817_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 508.0
MMD3_k127_4190817_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000001364 109.0
MMD3_k127_4194959_0 MacB-like periplasmic core domain - - - 0.0 1083.0
MMD3_k127_4194959_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000001146 250.0
MMD3_k127_4194959_2 Mur ligase middle domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000002039 218.0
MMD3_k127_4194959_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000000009948 190.0
MMD3_k127_4200197_0 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 590.0
MMD3_k127_4200197_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 501.0
MMD3_k127_4200197_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000003161 54.0
MMD3_k127_4220790_0 enterobactin catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 561.0
MMD3_k127_4220790_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 421.0
MMD3_k127_4220790_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 303.0
MMD3_k127_4220790_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000001023 67.0
MMD3_k127_4223305_0 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 342.0
MMD3_k127_4223305_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000008689 189.0
MMD3_k127_4223571_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 317.0
MMD3_k127_4223571_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000006602 187.0
MMD3_k127_4232717_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 431.0
MMD3_k127_4232717_1 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000005769 79.0
MMD3_k127_4243210_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 458.0
MMD3_k127_4243210_1 Bacterial transcriptional repressor C-terminal - - - 0.00000000000000000000008225 102.0
MMD3_k127_4243210_2 Glycosyl transferase family 21 K00694 - 2.4.1.12 0.00000000000000000002054 96.0
MMD3_k127_4243210_3 - - - - 0.0002117 51.0
MMD3_k127_4245877_0 PFAM FecR protein - - - 0.0000000000000000000000000000000000000000000000507 191.0
MMD3_k127_4245877_1 - - - - 0.00000000000000000001367 97.0
MMD3_k127_4245955_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 383.0
MMD3_k127_4245955_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789 - - 0.0000000000000000000000000000000000000000000000000000000002002 207.0
MMD3_k127_4247699_0 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 537.0
MMD3_k127_4247699_1 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000000003873 157.0
MMD3_k127_4247699_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000003958 95.0
MMD3_k127_4247699_3 Aminotransferase class-III K00823 - 2.6.1.19 0.0000000000000000477 81.0
MMD3_k127_4254050_0 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000007188 246.0
MMD3_k127_4254050_1 Histidine kinase K02478 - 2.7.13.3 0.00000000000000000000000000000000000000000002462 166.0
MMD3_k127_4264702_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 530.0
MMD3_k127_4264702_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 424.0
MMD3_k127_4264852_0 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000002908 192.0
MMD3_k127_4264852_1 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000002438 97.0
MMD3_k127_4264852_2 Enoyl-CoA hydratase/isomerase K07539 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.000000000000000000001802 95.0
MMD3_k127_4268068_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 539.0
MMD3_k127_4268141_0 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000001406 190.0
MMD3_k127_4271008_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 314.0
MMD3_k127_4271008_1 cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000008062 213.0
MMD3_k127_4271008_2 R3H domain K06346 - - 0.000000000000000000000000000000000000000000000000001264 188.0
MMD3_k127_4274207_0 MviN-like protein K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 570.0
MMD3_k127_4274207_1 metallopeptidase activity K06212,K06402 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031224,GO:0031226,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 367.0
MMD3_k127_4280944_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 331.0
MMD3_k127_4280944_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
MMD3_k127_429052_0 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 451.0
MMD3_k127_429052_1 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002404 281.0
MMD3_k127_4298901_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 370.0
MMD3_k127_4298901_1 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000009523 91.0
MMD3_k127_4298901_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.0000000000001462 78.0
MMD3_k127_4312360_0 Belongs to the thiolase family K08764 - 2.3.1.176 0.0000000000000000000000000000000005899 146.0
MMD3_k127_4312360_1 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000004003 56.0
MMD3_k127_4321889_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 1.362e-248 771.0
MMD3_k127_4321889_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000001578 200.0
MMD3_k127_4321988_0 Semialdehyde dehydrogenase K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 389.0
MMD3_k127_4321988_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 334.0
MMD3_k127_4321988_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000005466 261.0
MMD3_k127_4321988_3 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000000000000000901 183.0
MMD3_k127_4321988_4 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000004056 168.0
MMD3_k127_4325822_0 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002853 266.0
MMD3_k127_4325822_1 - - - - 0.00000000000000000000002532 107.0
MMD3_k127_4326138_0 NHLM bacteriocin system ABC transporter, ATP-binding protein K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 370.0
MMD3_k127_4326138_1 - - - - 0.00000000000000000000000000000000002056 138.0
MMD3_k127_4326138_2 Sigma-70 region 2 K03088 - - 0.0000000000000000000005322 103.0
MMD3_k127_4326138_3 Tetratricopeptide repeat - - - 0.000000000000000000002275 106.0
MMD3_k127_4327712_0 palmitoyl-(protein) hydrolase activity K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 363.0
MMD3_k127_4327712_1 Urocanase Rossmann-like domain K01712 - 4.2.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001148 269.0
MMD3_k127_4327712_2 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000002676 256.0
MMD3_k127_4332313_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 601.0
MMD3_k127_4332313_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 332.0
MMD3_k127_4332313_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000009531 167.0
MMD3_k127_4332313_3 Regulatory protein, FmdB - - - 0.0000000006944 63.0
MMD3_k127_4332313_5 TonB-dependent receptor - - - 0.0003668 48.0
MMD3_k127_433341_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 335.0
MMD3_k127_433341_1 - - - - 0.0000000000000000000000000000000000000000000000000086 186.0
MMD3_k127_4338071_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 7.172e-262 818.0
MMD3_k127_4338071_1 DinB superfamily - - - 0.00000000000000000000000000000000000000000427 160.0
MMD3_k127_4339215_0 Phosphomannose isomerase type I K01809 - 5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 372.0
MMD3_k127_4339215_1 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.000000000000202 70.0
MMD3_k127_4348319_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 443.0
MMD3_k127_4348319_1 peroxiredoxin activity K00020,K01055,K01259,K01607,K14727 - 1.1.1.31,3.1.1.24,3.4.11.5,4.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 424.0
MMD3_k127_4349970_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 381.0
MMD3_k127_4353351_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 356.0
MMD3_k127_4353351_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000005512 72.0
MMD3_k127_4353900_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006625 274.0
MMD3_k127_4353900_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000005555 159.0
MMD3_k127_4353900_2 metallopeptidase activity K20276 - - 0.000000003395 68.0
MMD3_k127_4355952_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 588.0
MMD3_k127_4357553_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 1.579e-258 812.0
MMD3_k127_4357553_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000004825 106.0
MMD3_k127_4357553_2 - - - - 0.0000000000009208 79.0
MMD3_k127_4359000_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 369.0
MMD3_k127_4359000_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 325.0
MMD3_k127_4359000_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000578 54.0
MMD3_k127_4369036_0 amine dehydrogenase activity - - - 1.159e-295 950.0
MMD3_k127_4369036_1 PFAM S1 P1 nuclease - - - 0.000000000000000000000000000000000000000000000000000000001664 230.0
MMD3_k127_4369036_2 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000012 162.0
MMD3_k127_4372957_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 538.0
MMD3_k127_4372957_1 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004655 267.0
MMD3_k127_4372957_2 - - - - 0.000000000000000000000000000000000000000000000000366 191.0
MMD3_k127_4372957_4 Hep Hag repeat protein - - - 0.00005582 55.0
MMD3_k127_4373574_0 efflux protein, MATE family K03327 - - 0.000000000000000000000000000000000000000000000000000000000000311 219.0
MMD3_k127_4373574_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000001753 64.0
MMD3_k127_4375149_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 1.252e-241 758.0
MMD3_k127_4375149_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 338.0
MMD3_k127_4375149_2 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000005839 82.0
MMD3_k127_4386087_0 Belongs to the ClpA ClpB family K03696 - - 3.337e-238 740.0
MMD3_k127_4386087_1 Peptidyl-prolyl cis-trans isomerase K01802,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000005633 255.0
MMD3_k127_4386087_2 DinB superfamily - - - 0.000000000000000000000000000000000000004168 153.0
MMD3_k127_4386087_3 diguanylate cyclase - - - 0.0000000000000000000002693 97.0
MMD3_k127_4387404_0 phosphorelay sensor kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001365 274.0
MMD3_k127_4389058_0 Required for chromosome condensation and partitioning K03529 - - 7.675e-206 657.0
MMD3_k127_4389501_0 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 329.0
MMD3_k127_4389501_1 PFAM CHAD domain - - - 0.000002922 59.0
MMD3_k127_4390724_0 Amidohydrolase family K06015 - 3.5.1.81 1.429e-204 643.0
MMD3_k127_4390724_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 551.0
MMD3_k127_4393926_0 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000069 224.0
MMD3_k127_4393926_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000001263 228.0
MMD3_k127_4397595_0 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000132 198.0
MMD3_k127_4397595_1 HD domain K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000005039 195.0
MMD3_k127_4397595_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000002483 152.0
MMD3_k127_4409124_0 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 506.0
MMD3_k127_4409124_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 440.0
MMD3_k127_4409223_0 DEAD DEAH box helicase K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 356.0
MMD3_k127_4409223_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003305 266.0
MMD3_k127_4409223_2 RNA recognition motif - - - 0.0000000000000000000000000000000001306 135.0
MMD3_k127_4409223_3 - - - - 0.00000000000000000000000000001285 122.0
MMD3_k127_4424780_0 PFAM Ubiquitin-conjugating - - - 0.00000000000000000000000000000000000000007305 164.0
MMD3_k127_4424780_1 Domain of unknown function (DUF4339) - - - 0.000000000000000000001014 100.0
MMD3_k127_4424780_2 Protein of unknown function (DUF2752) - - - 0.0000000000000003375 84.0
MMD3_k127_4426029_0 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 600.0
MMD3_k127_4426029_1 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 404.0
MMD3_k127_4426029_2 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001893 255.0
MMD3_k127_4426029_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000005074 127.0
MMD3_k127_4436041_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 337.0
MMD3_k127_4436041_1 DNA ligase D, 3'-phosphoesterase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 333.0
MMD3_k127_4436418_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 577.0
MMD3_k127_4452436_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 375.0
MMD3_k127_4452436_1 Efflux transporter, RND family, MFP subunit K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 326.0
MMD3_k127_4452436_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000001099 151.0
MMD3_k127_4461735_0 CarboxypepD_reg-like domain - - - 1.261e-254 805.0
MMD3_k127_4461735_1 PFAM Fasciclin domain - - - 0.000000000000000000000000000000000000000000000001373 180.0
MMD3_k127_4467828_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 306.0
MMD3_k127_4467828_1 efflux transmembrane transporter activity - - - 0.000000000000000000001394 96.0
MMD3_k127_4469618_0 Aromatic amino acid lyase K01745 - 4.3.1.3 2.766e-219 693.0
MMD3_k127_4469618_1 Carboxyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 407.0
MMD3_k127_4469618_2 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 401.0
MMD3_k127_4469618_3 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 327.0
MMD3_k127_4469618_4 Tautomerase enzyme - - - 0.000000000000000000000000000000000000000000000004964 177.0
MMD3_k127_4469618_5 Tautomerase enzyme - - - 0.0000000000000000000000000000000000000000000001462 171.0
MMD3_k127_4469618_6 PFAM thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000000000001214 170.0
MMD3_k127_4475575_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 575.0
MMD3_k127_4475575_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 477.0
MMD3_k127_4475575_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000001043 170.0
MMD3_k127_4475575_3 PFAM O-methyltransferase - - - 0.0000000000000000000000000000000000000000000004038 171.0
MMD3_k127_4479110_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 535.0
MMD3_k127_4479110_1 alpha-ribazole phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000001831 196.0
MMD3_k127_4479110_2 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000001713 184.0
MMD3_k127_4479110_3 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000001772 177.0
MMD3_k127_4479271_0 pfam abc K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 383.0
MMD3_k127_4479271_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000001445 164.0
MMD3_k127_4479271_3 epimerase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000002253 109.0
MMD3_k127_4479271_4 - - - - 0.000000713 53.0
MMD3_k127_4494633_0 High-affinity nickel-transport protein K07241 - - 0.000000000000000000000000000000000000000000000000000000008 204.0
MMD3_k127_4494633_1 PFAM multicopper oxidase type 2 K06324 - 1.16.3.3 0.00000000000000000000000000001948 123.0
MMD3_k127_4495384_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 542.0
MMD3_k127_4495384_1 excinuclease ABC activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 374.0
MMD3_k127_4495384_2 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005767 312.0
MMD3_k127_4495384_3 Malate synthase K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001209 280.0
MMD3_k127_4497105_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 2.996e-196 617.0
MMD3_k127_4499423_0 3-isopropylmalate dehydratase activity K01681,K01703,K01704,K17749 - 4.2.1.3,4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 582.0
MMD3_k127_4499423_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 352.0
MMD3_k127_4499423_2 4Fe-4S dicluster domain K05524 - - 0.000000000000000000000000000000000000000000004786 165.0
MMD3_k127_4499685_0 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 2.51e-276 863.0
MMD3_k127_4499685_1 PASTA domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000001004 207.0
MMD3_k127_4499685_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000157 129.0
MMD3_k127_4508835_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 575.0
MMD3_k127_4508835_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 378.0
MMD3_k127_4508835_2 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000007015 124.0
MMD3_k127_4512339_0 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 489.0
MMD3_k127_4517774_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 346.0
MMD3_k127_4517774_1 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000324 278.0
MMD3_k127_4517774_2 Ferredoxin thioredoxin reductase catalytic beta chain K17892 - 1.8.7.2 0.000000000000000000000000000000000000000000000000000000000000000000001716 237.0
MMD3_k127_4517774_3 oxidoreductase activity - - - 0.0000000000000000000000000000001029 135.0
MMD3_k127_4519935_0 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 279.0
MMD3_k127_4519935_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000514 162.0
MMD3_k127_4520142_0 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000556 224.0
MMD3_k127_4520142_1 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000001036 109.0
MMD3_k127_4522660_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 538.0
MMD3_k127_4522660_1 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000000002756 219.0
MMD3_k127_4522660_2 - - - - 0.0000000000000000000000000000000000000004382 149.0
MMD3_k127_4526246_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 403.0
MMD3_k127_4526246_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 286.0
MMD3_k127_4530678_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0 1061.0
MMD3_k127_4530678_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004583 268.0
MMD3_k127_4530678_2 Bacterial extracellular solute-binding protein K02020 - - 0.000000005303 58.0
MMD3_k127_4536542_0 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 415.0
MMD3_k127_4539379_0 conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001796 285.0
MMD3_k127_4539379_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000002813 150.0
MMD3_k127_4539379_2 - - - - 0.000000000000000000000000000000006242 143.0
MMD3_k127_454236_0 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 486.0
MMD3_k127_454236_1 Peptidase M16 inactive domain - - - 0.0000000000002517 74.0
MMD3_k127_4542390_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000001291 103.0
MMD3_k127_4542390_1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.00005173 54.0
MMD3_k127_4542390_2 COG0457 FOG TPR repeat - - - 0.0002032 54.0
MMD3_k127_4544318_0 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 437.0
MMD3_k127_4544318_1 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 421.0
MMD3_k127_4544318_2 PFAM Amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 299.0
MMD3_k127_4544318_3 Redoxin - - - 0.000000000000000000000000000000000000000000000000000005344 197.0
MMD3_k127_4544318_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000000003485 177.0
MMD3_k127_4544318_5 DinB superfamily - - - 0.00000000000000000000000000000001742 134.0
MMD3_k127_4550919_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.094e-292 902.0
MMD3_k127_4550919_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 442.0
MMD3_k127_4550919_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 375.0
MMD3_k127_4551784_0 BlaR1 peptidase M56 - - - 0.000000000000007237 87.0
MMD3_k127_4551784_1 Penicillinase repressor - - - 0.000000000000009918 79.0
MMD3_k127_4551784_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000002369 57.0
MMD3_k127_4554455_0 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 431.0
MMD3_k127_4554455_1 PFAM Amidohydrolase 2 K03392,K07045 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000001628 188.0
MMD3_k127_455831_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 531.0
MMD3_k127_455831_1 CoA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 339.0
MMD3_k127_455831_2 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007169 292.0
MMD3_k127_455831_3 polysaccharide biosynthetic process - - - 0.00000000009389 66.0
MMD3_k127_4567434_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 336.0
MMD3_k127_4567434_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000004826 213.0
MMD3_k127_4567434_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000254 196.0
MMD3_k127_4568305_0 acyl-CoA dehydrogenase K09456 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003995,GO:0005488,GO:0005515,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008470,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016491,GO:0016627,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0033554,GO:0042802,GO:0043565,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055114,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 574.0
MMD3_k127_4568305_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 314.0
MMD3_k127_4568305_2 alginic acid biosynthetic process - - - 0.000000006356 57.0
MMD3_k127_457271_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 551.0
MMD3_k127_457271_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 441.0
MMD3_k127_457271_2 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000006571 188.0
MMD3_k127_457271_3 Tryptophan 2,3-dioxygenase K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000004442 175.0
MMD3_k127_457271_4 PFAM regulatory protein, MarR - - - 0.000000000000000000000000000000000000000009226 157.0
MMD3_k127_457271_5 thioesterase K01075 - 3.1.2.23 0.00000000000000000000000000000005361 130.0
MMD3_k127_457271_6 Sigma-70 region 2 K03088 - - 0.000000000000000000000002197 103.0
MMD3_k127_4575454_0 alpha/beta hydrolase fold K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003885 277.0
MMD3_k127_4575454_1 Cold shock protein K03704 - - 0.000000000000000000000000001144 112.0
MMD3_k127_4575653_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 589.0
MMD3_k127_4575653_1 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000002034 155.0
MMD3_k127_4577397_0 signal transduction histidine kinase - - - 9.635e-246 781.0
MMD3_k127_4577397_1 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 1.926e-231 722.0
MMD3_k127_4577397_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 375.0
MMD3_k127_4577397_3 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000002424 186.0
MMD3_k127_4577397_4 Effector of murein hydrolase LrgA K05338,K06518 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009253,GO:0015031,GO:0015833,GO:0016020,GO:0030203,GO:0033036,GO:0042886,GO:0043170,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000004561 87.0
MMD3_k127_4582115_0 Alpha amylase - - - 0.0 1245.0
MMD3_k127_4585748_0 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 456.0
MMD3_k127_4585748_1 Integral membrane protein DUF92 - - - 0.00000000000000000000000001667 121.0
MMD3_k127_4600389_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1403.0
MMD3_k127_4600389_1 Regulator of ribonuclease activity B - - - 0.00000000000000000000000000000000000004583 148.0
MMD3_k127_4605608_0 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 332.0
MMD3_k127_4605608_1 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 336.0
MMD3_k127_4605608_2 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002164 247.0
MMD3_k127_4605608_3 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000002748 174.0
MMD3_k127_4605608_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000003044 169.0
MMD3_k127_4605608_5 - - - - 0.000000000000000000000000000000000004171 143.0
MMD3_k127_4605608_6 PFAM response regulator receiver - - - 0.000000000000003979 75.0
MMD3_k127_4612565_0 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000002067 227.0
MMD3_k127_4612565_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001382 244.0
MMD3_k127_4612565_2 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000009447 206.0
MMD3_k127_4612565_3 - - - - 0.0000000000000000000000000006289 120.0
MMD3_k127_4612565_4 PFAM Peptidase S53, propeptide - - - 0.00000000008584 76.0
MMD3_k127_4612882_0 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 358.0
MMD3_k127_4612882_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 342.0
MMD3_k127_4612882_2 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 307.0
MMD3_k127_4612882_3 PFAM von Willebrand factor type A - - - 0.000007112 48.0
MMD3_k127_461346_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 572.0
MMD3_k127_461346_1 von Willebrand factor, type A - - - 0.000000000000000000000000000000004184 138.0
MMD3_k127_4613969_0 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 469.0
MMD3_k127_4613969_1 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001394 281.0
MMD3_k127_4615097_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 9.368e-227 708.0
MMD3_k127_4618122_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 562.0
MMD3_k127_4618122_1 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 459.0
MMD3_k127_461890_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 482.0
MMD3_k127_461890_1 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 451.0
MMD3_k127_461890_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000002951 143.0
MMD3_k127_4644283_0 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 354.0
MMD3_k127_4648979_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 434.0
MMD3_k127_4648979_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 315.0
MMD3_k127_4650284_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 332.0
MMD3_k127_4650284_1 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000183 181.0
MMD3_k127_4650284_2 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000003682 153.0
MMD3_k127_4661653_0 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000005268 251.0
MMD3_k127_4661653_1 - - - - 0.000000000000000000000000000000000000000000000000000000000004883 213.0
MMD3_k127_4661653_2 Adenylate cyclase - - - 0.0000000000000000000000005868 111.0
MMD3_k127_4666298_0 ABC transporter K11085 - - 2.317e-244 769.0
MMD3_k127_4666298_1 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 425.0
MMD3_k127_4666298_2 Domain of unknown function (DUF1732) - - - 0.00000000000000000003281 92.0
MMD3_k127_4666298_3 Peptidase M50 - - - 0.000007169 55.0
MMD3_k127_4672095_0 heat shock protein binding - - - 0.0 1037.0
MMD3_k127_4672095_1 heat shock protein binding - - - 1.04e-241 763.0
MMD3_k127_46732_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001283 265.0
MMD3_k127_46732_2 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000001114 224.0
MMD3_k127_46732_3 Anti-sigma-K factor rskA - - - 0.0000000000000000000000000000001434 129.0
MMD3_k127_4677981_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 289.0
MMD3_k127_4677981_1 Tyrosine-protein kinase, subgroup, catalytic domain K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000004746 238.0
MMD3_k127_4677981_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000000003646 164.0
MMD3_k127_4677981_3 Haem-degrading - - - 0.00000000000000000000000000000000000009448 146.0
MMD3_k127_4683380_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 612.0
MMD3_k127_4683380_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 484.0
MMD3_k127_4683380_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000000005895 205.0
MMD3_k127_4696780_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 292.0
MMD3_k127_4696780_1 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000000000001238 183.0
MMD3_k127_4696780_2 Bacterial DNA-binding protein K03530 - - 0.000000000000000000000000000000000000000001017 158.0
MMD3_k127_4696780_3 Reverse transcriptase-like K03469 - 3.1.26.4 0.000000000000000000000000000000000000000005834 158.0
MMD3_k127_4696780_4 Conserved hypothetical protein 95 - - - 0.000000000000000000000001486 104.0
MMD3_k127_4696780_5 Belongs to the ABC transporter superfamily K02031 - - 0.0000000001717 63.0
MMD3_k127_470044_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 537.0
MMD3_k127_470044_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 519.0
MMD3_k127_470044_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000002568 144.0
MMD3_k127_470044_3 Protein of unknown function (DUF2905) - - - 0.00000000000000000007727 91.0
MMD3_k127_470044_4 - - - - 0.000000002405 64.0
MMD3_k127_4709209_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 399.0
MMD3_k127_4709209_1 Thioesterase superfamily - - - 0.000000000000001772 83.0
MMD3_k127_4714812_0 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000001034 188.0
MMD3_k127_4716549_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 464.0
MMD3_k127_4716549_1 peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 424.0
MMD3_k127_4716549_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000004834 205.0
MMD3_k127_472809_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 457.0
MMD3_k127_472809_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000002986 162.0
MMD3_k127_472809_2 GIY-YIG catalytic domain - - - 0.0000000000000000000000004049 106.0
MMD3_k127_472809_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000005996 56.0
MMD3_k127_4729189_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001369 270.0
MMD3_k127_4729189_1 COG2513 PEP phosphonomutase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000003014 232.0
MMD3_k127_4730542_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 595.0
MMD3_k127_4730542_2 - - - - 0.0007567 47.0
MMD3_k127_4735710_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 496.0
MMD3_k127_4735710_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000009513 228.0
MMD3_k127_4748017_0 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 462.0
MMD3_k127_4748017_1 of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 293.0
MMD3_k127_4748017_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000271 66.0
MMD3_k127_4755500_0 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 547.0
MMD3_k127_4755500_1 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000009447 248.0
MMD3_k127_4755500_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000002319 97.0
MMD3_k127_4756800_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 7.3e-212 666.0
MMD3_k127_4756800_1 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000017 118.0
MMD3_k127_4756800_2 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.00000000000000077 77.0
MMD3_k127_4756800_3 Septum formation initiator K05589 - - 0.000000000000005491 79.0
MMD3_k127_4757373_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 550.0
MMD3_k127_4757373_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 330.0
MMD3_k127_4758678_0 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000525 217.0
MMD3_k127_4758678_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000002337 205.0
MMD3_k127_4762921_0 Bacterial protein of unknown function (DUF885) K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 440.0
MMD3_k127_4762921_1 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 335.0
MMD3_k127_4762921_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000001052 202.0
MMD3_k127_4762921_3 Ceramidase - - - 0.00000000000000000000000000000000000000000000000002425 188.0
MMD3_k127_4769909_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 362.0
MMD3_k127_4769909_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000006264 192.0
MMD3_k127_4769909_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000006832 181.0
MMD3_k127_4769909_3 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000001891 127.0
MMD3_k127_4769909_4 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000739 103.0
MMD3_k127_4769909_5 Conserved hypothetical protein (DUF2461) - - - 0.0006314 45.0
MMD3_k127_4770760_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 302.0
MMD3_k127_4770760_1 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002936 254.0
MMD3_k127_4770760_2 benzoyl-CoA reductase K04112 - 1.3.7.8 0.000000000000000000000000000000000000000006695 161.0
MMD3_k127_4770772_0 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 539.0
MMD3_k127_4770772_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 375.0
MMD3_k127_477387_0 Protein involved in outer membrane biogenesis K07289,K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 377.0
MMD3_k127_477387_1 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000001291 220.0
MMD3_k127_477387_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000002914 155.0
MMD3_k127_4781321_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002607 281.0
MMD3_k127_4781321_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000001178 215.0
MMD3_k127_4781321_2 PilZ domain - - - 0.0000000000000000000000000405 112.0
MMD3_k127_4782224_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 2.388e-259 804.0
MMD3_k127_4782857_0 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002072 250.0
MMD3_k127_4782857_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000001731 234.0
MMD3_k127_4782857_2 - - - - 0.000000000000000000000000000000000000000000000000000000000189 217.0
MMD3_k127_4782857_3 PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000002212 194.0
MMD3_k127_4782857_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000569 92.0
MMD3_k127_4787137_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 5.686e-203 636.0
MMD3_k127_4793023_0 Nicotinate phosphoribosyltransferase (NAPRTase) family K03462 - 2.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000004293 263.0
MMD3_k127_4793023_1 - - - - 0.0000000000000001012 80.0
MMD3_k127_4793023_2 - - - - 0.00000001981 60.0
MMD3_k127_4799568_0 Insulinase (Peptidase family M16) K07263 - - 6.357e-197 624.0
MMD3_k127_4799568_1 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 465.0
MMD3_k127_4799568_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007694 280.0
MMD3_k127_4799568_3 DUF167 K09131 - - 0.0000005564 55.0
MMD3_k127_4802560_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 1.23e-292 916.0
MMD3_k127_4802560_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 522.0
MMD3_k127_4802560_2 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 368.0
MMD3_k127_4806279_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 357.0
MMD3_k127_4807624_0 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006251 271.0
MMD3_k127_4807624_1 ABC transporter - - - 0.0000000000000000000000001151 108.0
MMD3_k127_4807624_2 PFAM Cytochrome c assembly protein K02195 - - 0.000001013 52.0
MMD3_k127_4808039_0 peptidoglycan turnover K06958,K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 601.0
MMD3_k127_4808039_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 301.0
MMD3_k127_4808239_0 Tetrapyrrole (Corrin/Porphyrin) Methylases - - - 0.0000000001344 72.0
MMD3_k127_4808239_1 The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity - - - 0.0002412 49.0
MMD3_k127_4811209_0 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000005162 233.0
MMD3_k127_4811209_1 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000004233 123.0
MMD3_k127_4811209_2 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000000001964 89.0
MMD3_k127_4814092_0 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 548.0
MMD3_k127_4814092_1 PFAM Alcohol dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 524.0
MMD3_k127_4814092_2 TIGRFAM hopanoid-associated sugar epimerase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 480.0
MMD3_k127_4814092_3 Phosphorylase superfamily K01243 - 3.2.2.9 0.00000000000000000000000000000000000000000552 165.0
MMD3_k127_4819610_0 MacB-like periplasmic core domain - - - 0.0000000000000000002923 90.0
MMD3_k127_4819610_1 von Willebrand factor, type A - - - 0.0000000000001149 82.0
MMD3_k127_4819610_2 - - - - 0.00002839 55.0
MMD3_k127_4827276_0 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 442.0
MMD3_k127_4827276_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000001401 218.0
MMD3_k127_4827276_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000004968 191.0
MMD3_k127_4827276_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000121 153.0
MMD3_k127_4827276_4 Wzy family polymerase, exosortase system type 1 associated - - - 0.00000000000000000000000000000009402 141.0
MMD3_k127_4851750_0 metalloendopeptidase activity K01283 - 3.4.15.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 355.0
MMD3_k127_4851750_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000001065 166.0
MMD3_k127_4855826_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 434.0
MMD3_k127_4855826_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 383.0
MMD3_k127_4855826_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 303.0
MMD3_k127_4855826_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005561 250.0
MMD3_k127_4855826_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000003464 239.0
MMD3_k127_4855826_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000005913 190.0
MMD3_k127_4855826_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000001093 89.0
MMD3_k127_485863_0 HAD-superfamily hydrolase, subfamily IIB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 304.0
MMD3_k127_485863_1 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000001654 197.0
MMD3_k127_485863_2 TIGRFAM cytochrome C family protein - - - 0.0000000002403 67.0
MMD3_k127_4858802_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 527.0
MMD3_k127_4858802_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 516.0
MMD3_k127_4858802_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 287.0
MMD3_k127_4858802_3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767 - 5.2.1.8 0.000001504 53.0
MMD3_k127_4867920_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000001641 201.0
MMD3_k127_4867920_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000003304 197.0
MMD3_k127_4867920_2 DinB family - - - 0.0000000000000000000000000000000000000000000000002255 181.0
MMD3_k127_4872310_0 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 495.0
MMD3_k127_4872310_1 Yip1 domain - - - 0.0000000000000000000000000000001735 134.0
MMD3_k127_4891325_0 PAS domain - - - 5.763e-207 661.0
MMD3_k127_4891325_1 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 545.0
MMD3_k127_4891325_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 299.0
MMD3_k127_4891325_3 - - - - 0.00000000001124 75.0
MMD3_k127_4891325_4 - - - - 0.0000000005313 69.0
MMD3_k127_4895498_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 606.0
MMD3_k127_4895498_1 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 308.0
MMD3_k127_4895498_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 299.0
MMD3_k127_4895498_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000001671 231.0
MMD3_k127_4895498_4 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000000000000001474 220.0
MMD3_k127_4895498_5 - - - - 0.000005413 55.0
MMD3_k127_489848_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000001496 256.0
MMD3_k127_489848_1 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
MMD3_k127_489848_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000004841 177.0
MMD3_k127_489848_3 Ribonuclease T2 family K01166 - 3.1.27.1 0.0000000000000000000000000000000000000000000000005666 183.0
MMD3_k127_489848_4 gluconokinase activity - - - 0.00000000004771 70.0
MMD3_k127_4900747_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000001423 237.0
MMD3_k127_4900747_1 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000004384 217.0
MMD3_k127_4900747_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000001163 77.0
MMD3_k127_4903587_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 407.0
MMD3_k127_4903587_1 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 319.0
MMD3_k127_4903587_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000002394 207.0
MMD3_k127_4903587_3 WD40-like Beta Propeller - - - 0.00000000000000000000000000000000008341 136.0
MMD3_k127_4903592_0 Transport and Golgi organisation 2 K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 346.0
MMD3_k127_4903592_1 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003802 237.0
MMD3_k127_4903592_2 Transport and Golgi organisation 2 - - - 0.000000000000000000000000007672 120.0
MMD3_k127_4903592_3 - - - - 0.0000000000009939 70.0
MMD3_k127_491066_0 Aminotransferase class-III K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 592.0
MMD3_k127_491066_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009198 277.0
MMD3_k127_491066_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000002057 203.0
MMD3_k127_4917328_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 382.0
MMD3_k127_4917328_2 CHAD domain containing protein - - - 0.0000000000000000008045 100.0
MMD3_k127_4917328_3 NUDIX domain - - - 0.000000000004644 73.0
MMD3_k127_4917328_4 Recombinase zinc beta ribbon domain - - - 0.00002182 49.0
MMD3_k127_492990_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 1.464e-237 743.0
MMD3_k127_492990_1 ATP-dependent protease La (LON) substrate-binding domain - - - 0.00000000000001465 78.0
MMD3_k127_4931395_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 363.0
MMD3_k127_4932701_0 Prolyl oligopeptidase K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000003307 167.0
MMD3_k127_4932701_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000002763 153.0
MMD3_k127_4939315_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 555.0
MMD3_k127_4939315_1 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000563 261.0
MMD3_k127_4939315_3 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000858 208.0
MMD3_k127_4939315_4 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000008285 130.0
MMD3_k127_4939315_5 RecB family exonuclease K07465 - - 0.0000000000000000002457 97.0
MMD3_k127_4939977_0 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 314.0
MMD3_k127_4944335_0 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.0000000000000000000000000000000000000000000000000000000000001881 220.0
MMD3_k127_4944335_1 Nickel-dependent hydrogenase K15830 - - 0.0000000000000000000000000000000000000000000000000009869 190.0
MMD3_k127_4944335_2 Predicted membrane protein (DUF2339) - - - 0.0000000000000004381 83.0
MMD3_k127_4946829_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000001249 198.0
MMD3_k127_4946829_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000001727 83.0
MMD3_k127_4946978_0 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 361.0
MMD3_k127_4946978_1 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000008738 266.0
MMD3_k127_4946978_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000001964 151.0
MMD3_k127_4947043_0 synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 287.0
MMD3_k127_4947043_1 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001237 270.0
MMD3_k127_495334_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 610.0
MMD3_k127_495387_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 385.0
MMD3_k127_496071_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 341.0
MMD3_k127_496071_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 316.0
MMD3_k127_496071_2 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007816 304.0
MMD3_k127_496071_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007835 273.0
MMD3_k127_496071_4 outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000000000000000000000000001835 224.0
MMD3_k127_496071_5 Pfam:N_methyl_2 - - - 0.00000000000000000000000000002423 124.0
MMD3_k127_496071_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000001184 102.0
MMD3_k127_4964476_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 363.0
MMD3_k127_4964476_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000001568 219.0
MMD3_k127_4964476_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000001351 226.0
MMD3_k127_4964476_3 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000009841 112.0
MMD3_k127_4969804_0 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000000000000000005145 100.0
MMD3_k127_497082_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 565.0
MMD3_k127_497082_1 PFAM Appr-1-p processing - - - 0.0000000000000000000000001814 108.0
MMD3_k127_4970904_0 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003989 228.0
MMD3_k127_4970904_1 acetyltransferase - - - 0.00000000000001803 78.0
MMD3_k127_4978574_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007587 577.0
MMD3_k127_4982056_0 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006672 279.0
MMD3_k127_4982056_1 methyltransferase activity K00587 - 2.1.1.100 0.0000000000000000000000000000000000001464 150.0
MMD3_k127_4982056_2 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000003217 71.0
MMD3_k127_4983974_0 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 526.0
MMD3_k127_4983974_1 arylsulfatase activity K01083,K01126 - 3.1.3.8,3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 479.0
MMD3_k127_4988039_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 1.836e-212 675.0
MMD3_k127_4988330_0 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000003922 210.0
MMD3_k127_4988330_1 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000004161 192.0
MMD3_k127_4988526_0 TIGRFAM MazG family protein K02428,K04765 - 3.6.1.66,3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 337.0
MMD3_k127_4988526_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000007491 219.0
MMD3_k127_4988526_2 GGDEF domain' - - - 0.000000002912 68.0
MMD3_k127_499245_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 597.0
MMD3_k127_499245_1 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 419.0
MMD3_k127_49968_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 425.0
MMD3_k127_49968_1 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000000000000000000000000000000000009934 225.0
MMD3_k127_49968_2 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955,K05844 - 6.3.5.5 0.000000000000000000000000000000000000000000000004335 184.0
MMD3_k127_49968_3 - - - - 0.000000000000000000000001011 104.0
MMD3_k127_49968_4 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955,K05844 - 6.3.5.5 0.0000000000003611 76.0
MMD3_k127_5000328_0 - - - - 0.00000000000000000000000000001205 127.0
MMD3_k127_5010721_0 response regulator, receiver K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 590.0
MMD3_k127_5010721_1 - - - - 0.000000000000000000000000000000000007985 137.0
MMD3_k127_5010721_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000001464 76.0
MMD3_k127_5012151_0 ErfK YbiS YcfS YnhG family protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 470.0
MMD3_k127_5012151_1 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004144 245.0
MMD3_k127_5012151_2 cyclic nucleotide-binding K01420,K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000001409 234.0
MMD3_k127_5012151_3 universal stress protein - - - 0.0000000005443 70.0
MMD3_k127_5012151_4 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.0005437 49.0
MMD3_k127_5020814_0 Rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 303.0
MMD3_k127_502579_0 - - - - 0.000000000000000005447 92.0
MMD3_k127_5037702_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000005686 128.0
MMD3_k127_5037702_1 Preprotein translocase SecG subunit K03075 - - 0.00000000001826 65.0
MMD3_k127_5052026_0 PFAM peptidase - - - 2.408e-206 653.0
MMD3_k127_5052026_1 - - - - 0.0001226 49.0
MMD3_k127_5073396_0 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000006063 184.0
MMD3_k127_5073396_1 Polysaccharide biosynthesis protein - - - 0.000000000008718 71.0
MMD3_k127_5074810_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 551.0
MMD3_k127_5075197_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.776e-286 890.0
MMD3_k127_5076561_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 359.0
MMD3_k127_5087407_0 - - - - 0.0000000000000000000000000000000000006363 155.0
MMD3_k127_5087407_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000859 74.0
MMD3_k127_5092093_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 3.262e-194 618.0
MMD3_k127_5092093_1 Aminotransferase, class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 534.0
MMD3_k127_5092093_2 Cytochrome C biogenesis protein K06196,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 307.0
MMD3_k127_5092093_3 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002715 216.0
MMD3_k127_5092093_4 Glutathione peroxidase K02199 - - 0.000000000000000000000000000000000000005058 152.0
MMD3_k127_5092093_5 Disulphide bond corrector protein DsbC - - - 0.000000000000000000000000000000000008467 143.0
MMD3_k127_5092093_7 lyase activity - - - 0.00000000000000002066 82.0
MMD3_k127_5099063_0 NUDIX domain K03574 - 3.6.1.55 0.0000000000000001983 93.0
MMD3_k127_5101292_0 Dienelactone hydrolase family - - - 1.102e-203 644.0
MMD3_k127_5101292_1 Nucleoside-diphosphate-sugar epimerases - - - 0.0002177 44.0
MMD3_k127_5102191_0 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 373.0
MMD3_k127_5102191_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005599 247.0
MMD3_k127_5102191_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000006431 174.0
MMD3_k127_5102191_3 Putative zincin peptidase - - - 0.000000000000000000000000000000000003863 143.0
MMD3_k127_5102191_6 DNA-templated transcription, initiation K03088 - - 0.0000000003495 62.0
MMD3_k127_5102661_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.00000000000000000000000003674 113.0
MMD3_k127_5102661_1 MacB-like periplasmic core domain - - - 0.000000001551 61.0
MMD3_k127_5105469_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1037.0
MMD3_k127_5105469_1 Sugar (and other) transporter - - - 9.445e-209 660.0
MMD3_k127_5105469_2 Extracellular solute-binding protein K02027 - - 1.592e-194 615.0
MMD3_k127_5105469_3 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 337.0
MMD3_k127_5105469_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000888 81.0
MMD3_k127_5110442_0 Amino acid permease - - - 3.08e-321 1001.0
MMD3_k127_5110442_1 AAA ATPase K07478 - - 5.43e-209 658.0
MMD3_k127_5110442_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 528.0
MMD3_k127_5110442_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 516.0
MMD3_k127_5110442_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 317.0
MMD3_k127_5110442_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000256 243.0
MMD3_k127_5110442_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006843 238.0
MMD3_k127_5110442_7 - - - - 0.000000000000000000000000000000000000000000000000000006651 193.0
MMD3_k127_5110442_8 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000001351 180.0
MMD3_k127_5110442_9 - - - - 0.00000000000000000000000000034 115.0
MMD3_k127_5113071_0 Zn peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000151 280.0
MMD3_k127_5113071_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000003038 177.0
MMD3_k127_5113109_0 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 331.0
MMD3_k127_5113109_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000005394 174.0
MMD3_k127_5113253_0 Putative modulator of DNA gyrase K03568 - - 2.009e-244 765.0
MMD3_k127_5113253_1 - - - - 0.000000000000000000000000000003544 123.0
MMD3_k127_5113253_2 Putative modulator of DNA gyrase K03592 - - 0.000000001987 64.0
MMD3_k127_5113253_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000173 47.0
MMD3_k127_512009_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 521.0
MMD3_k127_512009_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172,K19072 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.00000000000000000000000000212 119.0
MMD3_k127_512009_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170,K19071 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.00000007044 56.0
MMD3_k127_5120787_0 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 459.0
MMD3_k127_5120787_1 chaperone-mediated protein folding - - - 0.000000000000000027 89.0
MMD3_k127_5130713_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 1.078e-226 712.0
MMD3_k127_5130713_1 Biotin-lipoyl like K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 406.0
MMD3_k127_5130713_2 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000001183 210.0
MMD3_k127_5133860_0 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000009238 210.0
MMD3_k127_5133860_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000007439 127.0
MMD3_k127_5133860_2 - - - - 0.00000000000008347 80.0
MMD3_k127_5135659_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 557.0
MMD3_k127_516660_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 8.634e-275 852.0
MMD3_k127_516660_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 330.0
MMD3_k127_517190_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 399.0
MMD3_k127_522209_0 - - - - 0.0000000000000000000000000000012 125.0
MMD3_k127_522219_0 Carboxypeptidase regulatory-like domain - - - 2.505e-208 665.0
MMD3_k127_524447_0 proline dipeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 409.0
MMD3_k127_524447_1 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001125 279.0
MMD3_k127_52510_0 Animal haem peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 396.0
MMD3_k127_526377_0 Secretin and TonB N terminus short domain K02666 - - 4.294e-216 697.0
MMD3_k127_526377_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 526.0
MMD3_k127_526377_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 382.0
MMD3_k127_526377_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000004956 208.0
MMD3_k127_526933_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 444.0
MMD3_k127_535922_0 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 407.0
MMD3_k127_535922_1 - - - - 0.0000000000000000000000000000004101 133.0
MMD3_k127_535922_3 glyoxalase III activity K00799,K04750 - 2.5.1.18 0.0000000000000000000000767 101.0
MMD3_k127_53852_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 383.0
MMD3_k127_53852_1 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000004537 236.0
MMD3_k127_53852_2 SPFH domain / Band 7 family - - - 0.00000000000000000000000000000000006663 136.0
MMD3_k127_53852_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000001484 131.0
MMD3_k127_544261_0 AcrB/AcrD/AcrF family - - - 1.48e-211 668.0
MMD3_k127_544261_1 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000003695 192.0
MMD3_k127_54685_0 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000004701 232.0
MMD3_k127_54685_1 PD-(D/E)XK nuclease superfamily - - - 0.000000005257 60.0
MMD3_k127_556489_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.664e-244 767.0
MMD3_k127_556489_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006648 325.0
MMD3_k127_556489_2 acetyltransferase - - - 0.0000000000000000000000000000000000004175 152.0
MMD3_k127_556489_3 Domain of unknown function (DUF4870) - - - 0.000000000000000000000001805 108.0
MMD3_k127_564760_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 482.0
MMD3_k127_564760_1 respiratory electron transport chain K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.00000000000000000000000000000000000000000000000000000000000000000007677 239.0
MMD3_k127_564760_2 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000001621 140.0
MMD3_k127_567364_0 PFAM Type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 561.0
MMD3_k127_567364_1 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000004129 227.0
MMD3_k127_567364_2 Pilus assembly protein K02662 - - 0.0000000002106 68.0
MMD3_k127_574240_0 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 456.0
MMD3_k127_577007_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000002093 206.0
MMD3_k127_577007_1 PFAM response regulator receiver K07665 - - 0.0000000000000000000000000000000000000000000000005617 184.0
MMD3_k127_577007_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000771 141.0
MMD3_k127_5826_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 452.0
MMD3_k127_5826_1 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 314.0
MMD3_k127_5826_2 Bacterial regulatory proteins, tetR family - - - 0.00001326 55.0
MMD3_k127_583162_0 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000129 136.0
MMD3_k127_583162_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000006882 102.0
MMD3_k127_583162_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000005704 72.0
MMD3_k127_588117_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001592 194.0
MMD3_k127_588117_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000002741 96.0
MMD3_k127_588117_2 - - - - 0.000000000000000007538 86.0
MMD3_k127_59196_0 Organic Anion Transporter Polypeptide (OATP) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 413.0
MMD3_k127_59196_1 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 341.0
MMD3_k127_59196_2 - K01992 - - 0.000000000000000000000000000000001002 148.0
MMD3_k127_59196_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000005759 123.0
MMD3_k127_603279_0 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 525.0
MMD3_k127_603279_1 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.00000000003265 66.0
MMD3_k127_603828_0 Required for chromosome condensation and partitioning K03529 - - 5.369e-240 760.0
MMD3_k127_606189_0 Phospholipid methyltransferase K21310 - 2.1.1.334 0.00000000000000000000000000000000000000001317 157.0
MMD3_k127_606189_1 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.00000000001274 72.0
MMD3_k127_608550_1 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000002249 146.0
MMD3_k127_614619_0 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 347.0
MMD3_k127_614619_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 334.0
MMD3_k127_619009_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 515.0
MMD3_k127_619009_1 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000001646 149.0
MMD3_k127_619009_2 - - - - 0.000000000000000000000000000000000002409 148.0
MMD3_k127_619009_3 Recombinase - - - 0.000000618 51.0
MMD3_k127_621639_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 381.0
MMD3_k127_621639_1 Peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000637 263.0
MMD3_k127_632585_0 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 448.0
MMD3_k127_632585_1 Binds the 23S rRNA K02909 - - 0.000000000000000000000000007783 109.0
MMD3_k127_632585_2 Trm112p-like protein K09791 - - 0.000000001132 60.0
MMD3_k127_639762_0 peptidase dimerisation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 411.0
MMD3_k127_639762_1 Sigma-54 interaction domain K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 302.0
MMD3_k127_639762_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001337 280.0
MMD3_k127_639762_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000003106 187.0
MMD3_k127_639762_4 - - - - 0.000000000008799 69.0
MMD3_k127_643115_0 Arginosuccinate synthase K01940 - 6.3.4.5 1.355e-213 668.0
MMD3_k127_643115_1 argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 443.0
MMD3_k127_643115_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000006466 117.0
MMD3_k127_650900_0 6-phosphogluconolactonase K00851,K01057 - 2.7.1.12,3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000002786 272.0
MMD3_k127_650900_1 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000000000002667 123.0
MMD3_k127_650900_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000715 55.0
MMD3_k127_650984_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 341.0
MMD3_k127_650984_1 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000004605 236.0
MMD3_k127_653423_0 Alpha/beta hydrolase family - - - 3.762e-293 915.0
MMD3_k127_653423_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 313.0
MMD3_k127_653423_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001246 253.0
MMD3_k127_653423_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002178 234.0
MMD3_k127_653423_4 - - - - 0.000000000000000000000000000000000000000000000000000000000002872 218.0
MMD3_k127_653423_6 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.000000000000000000001048 100.0
MMD3_k127_658364_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 524.0
MMD3_k127_658364_1 Fumarase C C-terminus K01679,K01744 - 4.2.1.2,4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 465.0
MMD3_k127_658364_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 389.0
MMD3_k127_658364_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 387.0
MMD3_k127_658364_4 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 316.0
MMD3_k127_658364_5 Domain of unknown function (DUF3488) - - - 0.0000000000000000000000000000000000000000000000000000000000003712 226.0
MMD3_k127_658364_6 - - - - 0.00000000000000004951 84.0
MMD3_k127_658802_0 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 346.0
MMD3_k127_667093_0 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 7.393e-243 768.0
MMD3_k127_667093_1 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000005599 113.0
MMD3_k127_667571_0 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000001249 189.0
MMD3_k127_667571_1 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000009373 106.0
MMD3_k127_667571_3 - - - - 0.000006884 49.0
MMD3_k127_667752_0 Aldehyde dehydrogenase family - - - 4.805e-200 633.0
MMD3_k127_667752_1 4Fe-4S dicluster domain K00184 - - 2.266e-198 640.0
MMD3_k127_667752_2 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 341.0
MMD3_k127_667752_3 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000001743 96.0
MMD3_k127_674417_0 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 412.0
MMD3_k127_674417_1 TIGRFAM TonB K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002931 275.0
MMD3_k127_674417_2 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000000000000000000000000000000000001241 186.0
MMD3_k127_674417_3 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000000000000000000000007865 181.0
MMD3_k127_674417_4 Tetratricopeptide repeat - - - 0.00000000000002618 74.0
MMD3_k127_677229_0 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000844 279.0
MMD3_k127_677229_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000003564 152.0
MMD3_k127_678452_0 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 332.0
MMD3_k127_678452_1 COGs COG2148 Sugar transferase involved in lipopolysaccharide synthesis - - - 0.000000000000000000000000000000000001002 141.0
MMD3_k127_678452_2 PFAM Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000003496 72.0
MMD3_k127_684366_0 WD40-like Beta Propeller K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 327.0
MMD3_k127_684366_1 TonB C terminal K03832 - - 0.00000000000000000000000000000000000000000000000000001835 198.0
MMD3_k127_684366_2 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000000000000000000000008989 181.0
MMD3_k127_6883_0 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 539.0
MMD3_k127_688802_0 - - - - 0.000000000000000000000000000000000000000000000000000535 198.0
MMD3_k127_688802_1 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000001912 95.0
MMD3_k127_688802_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000004537 72.0
MMD3_k127_690749_0 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 8.31e-292 908.0
MMD3_k127_690749_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.546e-247 775.0
MMD3_k127_690749_2 Type II/IV secretion system protein K02669 - - 1.217e-196 619.0
MMD3_k127_690749_3 PFAM Type II secretion system F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 591.0
MMD3_k127_690749_4 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000001022 237.0
MMD3_k127_690749_5 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000002971 184.0
MMD3_k127_690749_6 - - - - 0.0000000000004363 73.0
MMD3_k127_690922_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 354.0
MMD3_k127_690922_1 Bacterial capsule synthesis protein PGA_cap - - - 0.000000000000000000000000000000000000000000000002101 179.0
MMD3_k127_698259_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009535 407.0
MMD3_k127_698259_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 383.0
MMD3_k127_698259_2 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000000000000000000000000000001044 213.0
MMD3_k127_706946_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 6.389e-197 625.0
MMD3_k127_706946_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 392.0
MMD3_k127_706946_2 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 375.0
MMD3_k127_706946_3 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000005756 186.0
MMD3_k127_706946_4 Psort location Extracellular, score - - - 0.00000000000000000000000000000000000000000000000705 183.0
MMD3_k127_711920_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001925 259.0
MMD3_k127_711920_1 Domain of unknown function (DUF4149) - - - 0.00000000000000000000000000000000000000002225 157.0
MMD3_k127_712785_0 thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 2.772e-209 666.0
MMD3_k127_712785_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 476.0
MMD3_k127_712785_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000602 234.0
MMD3_k127_712785_3 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000003734 149.0
MMD3_k127_712785_4 conserved protein, contains double-stranded beta-helix domain - - - 0.000000007994 61.0
MMD3_k127_713542_0 ABC transporter K15738 - - 4.56e-204 646.0
MMD3_k127_713542_1 DoxX - - - 0.000000000000000000000000000000000002938 141.0
MMD3_k127_716711_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 451.0
MMD3_k127_716711_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 398.0
MMD3_k127_732868_0 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 435.0
MMD3_k127_732868_1 PFAM FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 367.0
MMD3_k127_73763_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 387.0
MMD3_k127_740512_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 503.0
MMD3_k127_740512_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004259 277.0
MMD3_k127_740512_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000006383 118.0
MMD3_k127_740710_0 MacB-like periplasmic core domain - - - 1.135e-205 664.0
MMD3_k127_741536_0 PFAM peptidase M13 K01415 - 3.4.24.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 434.0
MMD3_k127_741536_1 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 428.0
MMD3_k127_741536_2 PBS lyase HEAT-like repeat - - - 0.00007136 56.0
MMD3_k127_743136_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 503.0
MMD3_k127_743136_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 388.0
MMD3_k127_743136_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000003375 84.0
MMD3_k127_752808_0 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
MMD3_k127_752808_1 - - - - 0.000000000005079 68.0
MMD3_k127_752808_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000004502 62.0
MMD3_k127_758258_0 TonB-dependent Receptor Plug Domain - - - 4.639e-257 815.0
MMD3_k127_758258_1 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009157 488.0
MMD3_k127_758258_2 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000005382 101.0
MMD3_k127_759580_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 6.431e-217 681.0
MMD3_k127_759580_1 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 424.0
MMD3_k127_759580_2 Zn-dependent protease - - - 0.0000000000000000000000000000000000000000000000003963 188.0
MMD3_k127_759580_3 Aminotransferase class-III - - - 0.000000000000000000000000000000000000006574 149.0
MMD3_k127_759580_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000002907 82.0
MMD3_k127_760163_0 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 488.0
MMD3_k127_760163_1 - - - - 0.00000000000000000000000000000000000000000000000000186 193.0
MMD3_k127_760163_2 - - - - 0.0000000000000000005672 93.0
MMD3_k127_760163_3 - - - - 0.000000008116 62.0
MMD3_k127_760918_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 415.0
MMD3_k127_760918_1 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000008205 171.0
MMD3_k127_760918_2 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000005204 138.0
MMD3_k127_760918_3 RimK-like ATP-grasp domain K05844 - - 0.0000000000000000000000000000001847 135.0
MMD3_k127_760918_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000003104 121.0
MMD3_k127_769554_0 gluconolactonase activity K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 496.0
MMD3_k127_769554_1 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 338.0
MMD3_k127_769554_2 Putative zinc-finger - - - 0.0007563 48.0
MMD3_k127_787153_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 584.0
MMD3_k127_787153_1 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 456.0
MMD3_k127_787153_2 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 374.0
MMD3_k127_787153_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 362.0
MMD3_k127_787153_4 Mov34 MPN PAD-1 - - - 0.000000000000000000000000000000000000003569 153.0
MMD3_k127_804529_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 548.0
MMD3_k127_804529_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 403.0
MMD3_k127_804529_2 - - - - 0.00000000000000000000000000000000000000000000000001929 194.0
MMD3_k127_815836_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 347.0
MMD3_k127_815836_1 - - - - 0.0000000000000000000000000000000007155 137.0
MMD3_k127_815836_2 Fe-S oxidoreductases K22227 - - 0.000000000000000000000000000000001521 138.0
MMD3_k127_815836_3 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000001551 117.0
MMD3_k127_821390_0 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 340.0
MMD3_k127_821390_1 - - - - 0.00000000007369 67.0
MMD3_k127_837143_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000002632 159.0
MMD3_k127_837143_1 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000001095 157.0
MMD3_k127_843378_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 547.0
MMD3_k127_843378_1 Universal stress protein - - - 0.00000001333 61.0
MMD3_k127_846592_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 528.0
MMD3_k127_846592_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170,K19071 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 473.0
MMD3_k127_846592_2 Major Facilitator Superfamily K08177 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 421.0
MMD3_k127_846592_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172,K19072 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 343.0
MMD3_k127_846592_4 Regulatory protein GntR HTH K05799 - - 0.000000000000000000000000000000000000004176 154.0
MMD3_k127_861074_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 596.0
MMD3_k127_861074_1 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 465.0
MMD3_k127_861074_2 AAA domain - - - 0.00000000000000000000000000000002472 133.0
MMD3_k127_861074_3 NAD dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000004657 60.0
MMD3_k127_868149_0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000006082 249.0
MMD3_k127_868149_1 Proton-conducting membrane transporter K12141 - - 0.00000000008687 68.0
MMD3_k127_869378_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 592.0
MMD3_k127_875955_0 AcrB/AcrD/AcrF family - - - 4.215e-198 626.0
MMD3_k127_875955_1 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000006383 113.0
MMD3_k127_875955_2 - - - - 0.00000000000000003846 90.0
MMD3_k127_880984_0 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 308.0
MMD3_k127_880984_1 polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000008368 244.0
MMD3_k127_880984_2 Carboxypeptidase regulatory-like domain - - - 0.000006925 54.0
MMD3_k127_882096_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 443.0
MMD3_k127_882096_1 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000004391 90.0
MMD3_k127_882614_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 318.0
MMD3_k127_882614_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000007735 269.0
MMD3_k127_882614_2 pfkB family carbohydrate kinase K21344 - 2.7.1.167 0.0000000000000000696 82.0
MMD3_k127_883541_0 ABC transporter, transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 481.0
MMD3_k127_885278_0 - - - - 0.00000000000000000000000000000000000000000000000000006091 193.0
MMD3_k127_885278_1 - - - - 0.00000000000000000000000000000000000000000002961 165.0
MMD3_k127_893852_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 301.0
MMD3_k127_893852_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000001828 155.0
MMD3_k127_893852_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000157 153.0
MMD3_k127_895519_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 542.0
MMD3_k127_895519_1 ABC-type sugar transport system periplasmic component K02058,K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000008104 238.0
MMD3_k127_895519_2 Periplasmic or secreted lipoprotein - - - 0.0000000002041 70.0
MMD3_k127_89774_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001592 275.0
MMD3_k127_89774_1 Protein of unknown function (DUF4230) - - - 0.0000000000000000000000000000000000000000000000000001609 196.0
MMD3_k127_89774_2 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000004106 180.0
MMD3_k127_89774_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000006697 148.0
MMD3_k127_899738_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.129e-222 693.0
MMD3_k127_899738_1 Enoyl-CoA hydratase/isomerase K01715,K07537 - 4.2.1.100,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 362.0
MMD3_k127_899738_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 354.0
MMD3_k127_899738_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000006841 198.0
MMD3_k127_899738_4 Ribose/Galactose Isomerase K01808,K01819,K21911 GO:0003674,GO:0003824,GO:0004751,GO:0005975,GO:0008150,GO:0008152,GO:0009056,GO:0009743,GO:0009758,GO:0009987,GO:0010033,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0042221,GO:0044238,GO:0050896,GO:0051716,GO:0070887,GO:0071310,GO:0071322,GO:0071704,GO:1901575,GO:1901700,GO:1901701 5.3.1.26,5.3.1.34,5.3.1.6 0.000000000000000000000000000000000000000000000003682 177.0
MMD3_k127_901412_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 314.0
MMD3_k127_901412_1 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000000000006262 223.0
MMD3_k127_901412_2 Domain of unknown function (DUF4870) K09940 - - 0.00000000000000000000000000000000001254 142.0
MMD3_k127_907774_0 galactose-1-phosphate K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006313 287.0
MMD3_k127_907774_1 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000002026 180.0
MMD3_k127_909256_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009516 473.0
MMD3_k127_909256_1 Molybdopterin oxidoreductase K00123 - 1.17.1.9 0.00000000000000000000000007647 109.0
MMD3_k127_933684_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 426.0
MMD3_k127_933784_0 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000113 211.0
MMD3_k127_933784_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000001728 146.0
MMD3_k127_933784_2 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000003129 145.0
MMD3_k127_933784_3 Ion channel - - - 0.0000000000008244 69.0
MMD3_k127_933784_4 SNARE associated Golgi protein - - - 0.0000000001235 63.0
MMD3_k127_935473_0 NADH flavin K09461 - 1.14.13.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 608.0
MMD3_k127_943138_0 Heavy metal translocating P-type atpase - - - 1.124e-206 660.0
MMD3_k127_943138_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 293.0
MMD3_k127_943138_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001894 278.0
MMD3_k127_953868_0 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 304.0
MMD3_k127_953868_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.00000000000004569 72.0
MMD3_k127_95610_0 cyclic nucleotide-binding K01420,K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001649 264.0
MMD3_k127_95610_1 Universal stress protein - - - 0.000000000000000000000000000000000001432 149.0
MMD3_k127_95610_2 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000002138 126.0
MMD3_k127_959823_0 (Rhomboid) family - - - 0.000000000000000000000000000000000000000000000000000000000000000006265 235.0
MMD3_k127_959823_1 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000007547 206.0
MMD3_k127_959823_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000486 124.0
MMD3_k127_965126_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.565e-199 626.0
MMD3_k127_965126_1 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 420.0
MMD3_k127_965126_2 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000001119 179.0
MMD3_k127_974141_0 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000000000000007297 186.0
MMD3_k127_974141_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000001696 135.0
MMD3_k127_980968_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000005017 156.0
MMD3_k127_980968_1 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.0000000000000000000000001216 118.0
MMD3_k127_983863_0 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 507.0
MMD3_k127_983863_1 PFAM Major facilitator superfamily K02429 - - 0.00000000000000000000000000000000000000000000000005218 181.0
MMD3_k127_997110_0 PFAM Aminotransferase, class I K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 495.0
MMD3_k127_997110_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 464.0
MMD3_k127_997264_0 DNA recombination K09760 - - 0.00000000000000000000000000000000000000000000000000132 194.0
MMD3_k127_997264_1 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000005898 157.0
MMD3_k127_997264_2 3-carboxymuconate cyclase quinoprotein amine dehydrogenase, beta chain-like - - - 0.00000000000000000000000005045 120.0
MMD3_k127_999866_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 378.0
MMD3_k127_999866_1 Thermolysin metallopeptidase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000009148 241.0