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Overview

ID MAG02383
Name MMD3_bin.15
Sample SMP0060
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class SM23-61
Order SM23-61
Family SM23-61
Genus SM23-61
Species
Assembly information
Completeness (%) 75.34
Contamination (%) 2.84
GC content (%) 58.0
N50 (bp) 4,591
Genome size (bp) 2,891,737

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2798

Gene name Description KEGG GOs EC E-value Score Sequence
MMD3_k127_1004889_0 PFAM AMP-dependent synthetase and ligase K00666,K01897,K12508 - 6.2.1.3,6.2.1.34 2.485e-208 658.0
MMD3_k127_1004889_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 401.0
MMD3_k127_1004889_2 phosphatase activity K05967 - - 0.00000000000000000000000000000000000000000000000405 182.0
MMD3_k127_1004889_3 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates - - - 0.0000000000000000001468 91.0
MMD3_k127_1004889_4 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000002144 75.0
MMD3_k127_1010693_0 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 314.0
MMD3_k127_1010693_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 303.0
MMD3_k127_1010693_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000002016 177.0
MMD3_k127_1015229_0 PFAM NADH flavin oxidoreductase NADH oxidase, N-terminal - - - 8.739e-201 646.0
MMD3_k127_1015229_1 amidase activity K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001475 278.0
MMD3_k127_1015229_2 NIPSNAP - - - 0.000000000000000000000000000000000000000000000000009095 187.0
MMD3_k127_1015229_3 Trap transporter solute receptor - - - 0.0000005318 54.0
MMD3_k127_1015229_4 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K02433 - 6.3.5.6,6.3.5.7 0.0009222 42.0
MMD3_k127_103_0 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 325.0
MMD3_k127_103_1 Mandelate racemase muconate lactonizing enzyme K01683 - 4.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 316.0
MMD3_k127_103_2 with different specificities (related to short-chain alcohol - - - 0.000000000000000000000000000000000000000000000000000000000000000003158 234.0
MMD3_k127_103_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000611 186.0
MMD3_k127_103_4 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000002478 152.0
MMD3_k127_103_5 Belongs to the UPF0107 family K09128 - - 0.00000000000000000000000000000000002106 146.0
MMD3_k127_1030153_0 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000001824 226.0
MMD3_k127_1030153_1 Type II secretion system (T2SS), protein M K02462 - - 0.0000000003601 67.0
MMD3_k127_1030153_2 Fimbrial assembly family protein K02461 - - 0.000000001776 65.0
MMD3_k127_103826_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 405.0
MMD3_k127_103826_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 374.0
MMD3_k127_1040368_0 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 6.258e-284 891.0
MMD3_k127_1040368_1 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 468.0
MMD3_k127_1040368_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 400.0
MMD3_k127_1040368_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 367.0
MMD3_k127_1040368_4 PFAM Prokaryotic protein of K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 361.0
MMD3_k127_1040368_5 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 339.0
MMD3_k127_1040368_6 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008366 270.0
MMD3_k127_1040368_7 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008379 260.0
MMD3_k127_1040368_8 PFAM Glycoside hydrolase family 65, central catalytic - - - 0.00000000000000000000000000000000000000000000001468 180.0
MMD3_k127_1040368_9 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000003474 145.0
MMD3_k127_1049567_0 PFAM Carboxyl transferase domain - - - 3.162e-247 772.0
MMD3_k127_1049567_1 hydrolase activity, acting on ester bonds - GO:0003674,GO:0003824,GO:0004301,GO:0005488,GO:0005515,GO:0016787,GO:0016801,GO:0016803,GO:0018742,GO:0042802,GO:0042803,GO:0046983 - 0.000000000000000000000000000004125 120.0
MMD3_k127_1050558_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 587.0
MMD3_k127_1050558_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000001308 96.0
MMD3_k127_1050558_2 - - - - 0.00000000000000000003109 94.0
MMD3_k127_1050558_3 Putative regulatory protein - - - 0.00000002866 59.0
MMD3_k127_1050558_4 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00008238 49.0
MMD3_k127_107353_0 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 511.0
MMD3_k127_107353_1 Molybdate transporter of MFS superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 497.0
MMD3_k127_107353_10 bacterial (prokaryotic) histone like domain K05788 - - 0.000000000000000000000000008038 112.0
MMD3_k127_107353_11 Protein of unknown function DUF134 - - - 0.00000000000000000000000006093 110.0
MMD3_k127_107353_12 Bacterial regulatory helix-turn-helix protein, lysR family K02019,K05772 - - 0.00000000000000000000001237 104.0
MMD3_k127_107353_13 Putative zinc-finger - - - 0.0000000000000000000008502 97.0
MMD3_k127_107353_14 Putative bacterial lipoprotein (DUF799) - - - 0.00000000000002137 82.0
MMD3_k127_107353_15 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000003942 55.0
MMD3_k127_107353_2 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 372.0
MMD3_k127_107353_3 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004121 272.0
MMD3_k127_107353_4 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000207 267.0
MMD3_k127_107353_5 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003805 274.0
MMD3_k127_107353_6 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000005038 228.0
MMD3_k127_107353_7 phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000002528 196.0
MMD3_k127_107353_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000002438 168.0
MMD3_k127_107353_9 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000006027 149.0
MMD3_k127_1074167_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.572e-204 654.0
MMD3_k127_1074167_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 602.0
MMD3_k127_1074167_2 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000003386 74.0
MMD3_k127_1084128_0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000001033 229.0
MMD3_k127_1084128_1 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000003604 173.0
MMD3_k127_1084128_2 - K02600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000005796 86.0
MMD3_k127_1101538_0 PFAM Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003784 247.0
MMD3_k127_1101538_1 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000006687 147.0
MMD3_k127_1101538_2 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000294 104.0
MMD3_k127_1127713_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 503.0
MMD3_k127_1127713_1 PFAM flavin reductase domain protein FMN-binding - - - 0.000000000000000000000000000000000001191 142.0
MMD3_k127_1127713_2 Bacterial regulatory protein, Fis family K07715 - - 0.00000000000000000000000000004356 118.0
MMD3_k127_1127713_3 cell envelope organization K05807,K08309 - - 0.00000007595 62.0
MMD3_k127_1134768_0 ferredoxin oxidoreductase alpha subunit K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 348.0
MMD3_k127_1134768_1 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000002106 246.0
MMD3_k127_1134768_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000003376 193.0
MMD3_k127_1134768_3 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.000000000000000000000000000000000000000002033 160.0
MMD3_k127_1177754_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K12954,K12956,K17686,K21887 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009405,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0042221,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0046688,GO:0050896,GO:0051704,GO:0071944 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 441.0
MMD3_k127_1177754_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000002781 209.0
MMD3_k127_1177754_2 Protein of unknown function (DUF3106) - - - 0.00000000000000000000000000000003819 130.0
MMD3_k127_1177754_3 - - - - 0.00000000003892 69.0
MMD3_k127_1187695_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 537.0
MMD3_k127_1187695_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 467.0
MMD3_k127_1187695_2 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 381.0
MMD3_k127_1187695_3 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 356.0
MMD3_k127_1187695_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 324.0
MMD3_k127_1187695_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000323 130.0
MMD3_k127_1187695_6 PFAM AMP-dependent synthetase and ligase K01895,K08295 - 6.2.1.1,6.2.1.32 0.0000000000000001194 80.0
MMD3_k127_1191433_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000003153 136.0
MMD3_k127_1191433_1 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000002044 116.0
MMD3_k127_1191433_2 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0001228 47.0
MMD3_k127_1219212_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 8.372e-259 815.0
MMD3_k127_1219212_1 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 308.0
MMD3_k127_1219212_2 Cation transport protein K03498 - - 0.00000000000000792 74.0
MMD3_k127_1240820_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 327.0
MMD3_k127_1240820_1 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 323.0
MMD3_k127_1240820_2 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.00000000000000000000000001827 116.0
MMD3_k127_124163_0 Large extracellular alpha-helical protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 362.0
MMD3_k127_126218_0 ABC-type Fe3 transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 535.0
MMD3_k127_126218_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 452.0
MMD3_k127_126218_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 361.0
MMD3_k127_126218_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 354.0
MMD3_k127_1277327_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009674 351.0
MMD3_k127_1277327_1 FCD - - - 0.000000000000000000000000000000000003794 147.0
MMD3_k127_1277327_2 Amidohydrolase family - - - 0.000000007668 58.0
MMD3_k127_1277327_3 TIGRFAM MoaD family protein K03636 - - 0.0002938 48.0
MMD3_k127_1286334_0 Hydrogenase expression formation protein hypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 437.0
MMD3_k127_1286334_1 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 432.0
MMD3_k127_1286334_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0000000000000000000000000000000000000000006064 162.0
MMD3_k127_1287319_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001246 271.0
MMD3_k127_1287319_1 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000003896 73.0
MMD3_k127_1289193_0 GXGXG motif - - - 0.0 1096.0
MMD3_k127_1289193_1 Glutamate synthase - - - 2.815e-235 736.0
MMD3_k127_1289193_2 Belongs to the glutamate synthase family K00284 - 1.4.7.1 1.009e-231 726.0
MMD3_k127_1289193_3 L-glutamate biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 474.0
MMD3_k127_1289193_4 Nitrite and sulphite reductase 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 463.0
MMD3_k127_1289193_5 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000006912 59.0
MMD3_k127_1289193_6 4Fe-4S dicluster domain K00196 - - 0.0003415 46.0
MMD3_k127_1289381_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 355.0
MMD3_k127_1289381_1 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000001904 235.0
MMD3_k127_1289381_2 Psort location CytoplasmicMembrane, score K07793 - - 0.000000000000000000000000000000000000000000000006742 174.0
MMD3_k127_1289381_3 Tripartite tricarboxylate transporter TctB family - - - 0.00001567 53.0
MMD3_k127_1292647_0 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000003197 164.0
MMD3_k127_1292647_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000267 133.0
MMD3_k127_1292647_2 carbon dioxide binding K04653 - - 0.0000000000000000001025 91.0
MMD3_k127_1292647_3 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503,K19710,K21220 - 2.5.1.3,2.7.7.53 0.000000000000000001137 93.0
MMD3_k127_1292647_4 Transcription factor TFIID complex subunit 8 C-term K14649 - - 0.00003947 48.0
MMD3_k127_1302218_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 418.0
MMD3_k127_1302218_1 Bacterial transferase hexapeptide (six repeats) K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006648 274.0
MMD3_k127_1302751_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 383.0
MMD3_k127_1302751_1 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000002809 246.0
MMD3_k127_1302751_2 Flagellar protein D K02385 - - 0.00000000001179 68.0
MMD3_k127_1302751_3 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0000144 53.0
MMD3_k127_1304182_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 407.0
MMD3_k127_1304182_1 PFAM Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001761 228.0
MMD3_k127_1304182_2 nitrate reductase activity - - - 0.0000000000000000000000000000000000000000000003108 176.0
MMD3_k127_1304182_3 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000002076 126.0
MMD3_k127_1304182_4 PFAM response regulator receiver - - - 0.00000000000003165 86.0
MMD3_k127_1313901_0 unfolded protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 505.0
MMD3_k127_1313901_1 TIGRFAM geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007712 283.0
MMD3_k127_1318548_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 445.0
MMD3_k127_1318548_1 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 434.0
MMD3_k127_1318548_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000004554 188.0
MMD3_k127_1320839_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 599.0
MMD3_k127_1320839_1 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 413.0
MMD3_k127_1320839_2 Type II secretion system (T2SS), protein F K02455,K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 379.0
MMD3_k127_1320839_3 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 378.0
MMD3_k127_1320839_4 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000004131 74.0
MMD3_k127_1326762_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 384.0
MMD3_k127_1326762_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 383.0
MMD3_k127_1326762_2 Acyl-homoserine-lactone synthase - - - 0.00000000000000000000000000000000000000000000000000005663 195.0
MMD3_k127_1326762_3 FCD - - - 0.0000000000000002153 81.0
MMD3_k127_1330982_0 Thiamine pyrophosphate enzyme, central domain K06890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 555.0
MMD3_k127_1330982_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 445.0
MMD3_k127_1330982_2 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000001052 242.0
MMD3_k127_1330982_3 Putative glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000009554 199.0
MMD3_k127_1330982_4 Dodecin K09165 - - 0.0000000000000000000000005744 106.0
MMD3_k127_1330982_5 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000009754 76.0
MMD3_k127_1331492_0 Aromatic ring hydroxylase K14534 - 4.2.1.120,5.3.3.3 6.062e-209 661.0
MMD3_k127_1331492_1 GlcNAc-PI de-N-acetylase K16515 - 4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 358.0
MMD3_k127_1354851_0 AAA domain, putative AbiEii toxin, Type IV TA system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 316.0
MMD3_k127_1354851_1 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 306.0
MMD3_k127_1354851_2 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 289.0
MMD3_k127_1354851_4 cobalt ion transport K02007 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001189 280.0
MMD3_k127_1354851_5 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000004375 228.0
MMD3_k127_1354851_6 Cobalt transport protein K02008 - - 0.0000000000000000000000000000000000000000000000000000000000034 220.0
MMD3_k127_1354851_7 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000004023 192.0
MMD3_k127_1354851_8 cobalt ion transport K02009 - - 0.000000000000000000000000008582 122.0
MMD3_k127_1354851_9 Dodecin K09165 - - 0.0001944 45.0
MMD3_k127_1355899_0 TIGRFAM Acetoacetyl-CoA synthase K01907 - 6.2.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 591.0
MMD3_k127_1355899_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000002447 132.0
MMD3_k127_135760_0 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 519.0
MMD3_k127_135760_1 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 327.0
MMD3_k127_135760_2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002738 280.0
MMD3_k127_135760_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000002157 139.0
MMD3_k127_135760_4 - - - - 0.000000000000000000000000000005871 126.0
MMD3_k127_135760_5 - - - - 0.0000000000000000000000000196 114.0
MMD3_k127_1359223_0 carbohydrate kinase FGGY K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 499.0
MMD3_k127_1359223_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 319.0
MMD3_k127_1359223_2 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000519 257.0
MMD3_k127_1359223_3 S23 ribosomal protein - - - 0.0000000000000000000000000000000000000000204 157.0
MMD3_k127_1359223_4 Pfam Response regulator receiver - - - 0.00000000000000000000000000000003153 130.0
MMD3_k127_1359223_5 ATP-binding region ATPase domain protein - - - 0.000000000000000007041 97.0
MMD3_k127_1359223_6 PFAM ThiJ PfpI K05520 - 3.5.1.124 0.00000002354 55.0
MMD3_k127_1360056_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000001988 157.0
MMD3_k127_1360056_1 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0006046 44.0
MMD3_k127_1362939_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.044e-290 906.0
MMD3_k127_1362939_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000007424 211.0
MMD3_k127_1362939_2 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000004241 94.0
MMD3_k127_1362939_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000001989 65.0
MMD3_k127_1363543_0 Homeodomain-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 436.0
MMD3_k127_1363543_1 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 304.0
MMD3_k127_1363543_2 polymerase with PALM domain, HD hydrolase domain and Zn ribbon K09749 - - 0.0000000000000000001415 91.0
MMD3_k127_1375328_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 606.0
MMD3_k127_1375328_1 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 351.0
MMD3_k127_1375328_2 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 319.0
MMD3_k127_1375328_3 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000002617 172.0
MMD3_k127_1375329_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 390.0
MMD3_k127_1375329_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000003129 186.0
MMD3_k127_1379712_0 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 544.0
MMD3_k127_1379712_2 Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000000001488 109.0
MMD3_k127_139900_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 550.0
MMD3_k127_139900_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 519.0
MMD3_k127_139900_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000001324 230.0
MMD3_k127_1399963_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 353.0
MMD3_k127_1399963_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000003601 251.0
MMD3_k127_1399963_2 TM2 domain - - - 0.00000000000000000000000000002969 122.0
MMD3_k127_1399963_4 Aldo/keto reductase family - - - 0.000000001409 60.0
MMD3_k127_1405415_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000004621 271.0
MMD3_k127_1405415_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000003162 71.0
MMD3_k127_1415243_0 PFAM Protein kinase domain K05385,K12132,K13590 - 2.7.11.1,2.7.7.65 2.662e-267 874.0
MMD3_k127_1415243_1 Cupin - - - 0.00000000000000000001465 96.0
MMD3_k127_1415243_2 Belongs to the HesB IscA family K13628 - - 0.000307 45.0
MMD3_k127_1419020_0 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002159 259.0
MMD3_k127_1419020_1 Glycosyl transferase family 21 K00694 - 2.4.1.12 0.000003599 53.0
MMD3_k127_1439394_0 PFAM 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 323.0
MMD3_k127_1439394_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004111 249.0
MMD3_k127_1439394_2 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000004976 89.0
MMD3_k127_1445127_0 - - - - 0.0000000000000000000000000000000000000000000000000009058 198.0
MMD3_k127_1445127_1 Transglutaminase-like superfamily - - - 0.000000000000000000000009257 115.0
MMD3_k127_1445127_2 Thiamine biosynthesis protein - - - 0.0000001673 55.0
MMD3_k127_1449973_0 Domain of unknown function (DUF1846) - - - 5.906e-264 818.0
MMD3_k127_1449973_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 547.0
MMD3_k127_1449973_2 Cytochrome C assembly protein - - - 0.000000009545 59.0
MMD3_k127_1451928_0 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 345.0
MMD3_k127_1451928_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001203 257.0
MMD3_k127_1451928_2 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000001677 216.0
MMD3_k127_1451928_3 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000000000000001747 192.0
MMD3_k127_1451928_4 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000001503 126.0
MMD3_k127_1451928_5 type II secretion system K02454 - - 0.000000007106 60.0
MMD3_k127_1453574_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008884 491.0
MMD3_k127_1453574_1 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 319.0
MMD3_k127_1453574_2 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000002983 257.0
MMD3_k127_1453574_3 tigr00255 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002122 257.0
MMD3_k127_1453574_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000006561 217.0
MMD3_k127_1453574_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000006858 211.0
MMD3_k127_1453574_6 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000004202 174.0
MMD3_k127_1453574_7 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000000000000000000000000399 170.0
MMD3_k127_1453574_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000009559 82.0
MMD3_k127_1453743_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000007461 203.0
MMD3_k127_1453743_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000001406 199.0
MMD3_k127_1453743_2 Haemolytic - - - 0.000000000000000000000006655 110.0
MMD3_k127_1453743_3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000002621 89.0
MMD3_k127_1454156_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 446.0
MMD3_k127_1454156_1 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 385.0
MMD3_k127_1454156_10 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000006677 68.0
MMD3_k127_1454156_2 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 342.0
MMD3_k127_1454156_3 allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003126 273.0
MMD3_k127_1454156_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 273.0
MMD3_k127_1454156_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000036 239.0
MMD3_k127_1454156_6 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000017 218.0
MMD3_k127_1454156_7 Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000000000000002779 204.0
MMD3_k127_1454156_8 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000277 197.0
MMD3_k127_1454156_9 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000006685 148.0
MMD3_k127_1461258_0 ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 376.0
MMD3_k127_1461258_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000003892 150.0
MMD3_k127_1463690_0 Pterin binding enzyme K15023 - 2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 374.0
MMD3_k127_1463690_1 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 316.0
MMD3_k127_1463690_2 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000000000917 144.0
MMD3_k127_1463690_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000004235 93.0
MMD3_k127_1463767_0 6-phosphogluconate dehydrogenase, NAD-binding K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000003633 233.0
MMD3_k127_1463767_1 Acetyl-CoA hydrolase/transferase C-terminal domain K18122 - - 0.00000000000000000000000000000000000000000000000000000000000001949 218.0
MMD3_k127_1463767_2 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000001138 208.0
MMD3_k127_146728_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 7.378e-254 807.0
MMD3_k127_146728_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03851,K15372 - 2.6.1.55,2.6.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 549.0
MMD3_k127_146728_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 336.0
MMD3_k127_146728_3 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000002665 193.0
MMD3_k127_1467702_0 elongation factor Tu domain 2 protein K06207 - - 4.784e-292 907.0
MMD3_k127_1467702_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 518.0
MMD3_k127_1467702_10 RNA-binding - - - 0.00000000000000000000000000000004195 129.0
MMD3_k127_1467702_11 Belongs to the ABC transporter superfamily K02032,K10823 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000008499 100.0
MMD3_k127_1467702_12 cheY-homologous receiver domain - - - 0.000000000000009593 75.0
MMD3_k127_1467702_13 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.0000000000003938 81.0
MMD3_k127_1467702_2 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 452.0
MMD3_k127_1467702_3 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 398.0
MMD3_k127_1467702_4 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 317.0
MMD3_k127_1467702_5 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 308.0
MMD3_k127_1467702_6 Protein of unknown function (DUF933) K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 310.0
MMD3_k127_1467702_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 317.0
MMD3_k127_1467702_8 decarboxylase K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000000104 211.0
MMD3_k127_1467702_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000003666 152.0
MMD3_k127_1481418_0 Ammonium Transporter Family K03320 - - 6.095e-195 617.0
MMD3_k127_1481418_1 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 581.0
MMD3_k127_1481418_10 Histidine kinase - - - 0.000392 44.0
MMD3_k127_1481418_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 579.0
MMD3_k127_1481418_3 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001003 289.0
MMD3_k127_1481418_4 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000286 278.0
MMD3_k127_1481418_5 - - - - 0.0000000000000000000000000000000000000000000000000101 194.0
MMD3_k127_1481418_6 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000001367 178.0
MMD3_k127_1481418_7 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000321 177.0
MMD3_k127_1481418_8 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000001886 152.0
MMD3_k127_1481418_9 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.000000000002954 72.0
MMD3_k127_1488086_0 Creatinase/Prolidase N-terminal domain K01271,K15783 - 3.4.13.9,3.5.4.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000005453 270.0
MMD3_k127_1488086_1 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000000003479 156.0
MMD3_k127_1488863_0 transport system, fused permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 572.0
MMD3_k127_1488863_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 392.0
MMD3_k127_14923_0 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 497.0
MMD3_k127_14923_1 Cys/Met metabolism PLP-dependent enzyme K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 413.0
MMD3_k127_14923_2 D-galactarate dehydratase / Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 385.0
MMD3_k127_14923_3 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685 - 4.2.1.7 0.0000000000000000004803 89.0
MMD3_k127_1494638_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 327.0
MMD3_k127_1494638_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001273 197.0
MMD3_k127_1494649_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 326.0
MMD3_k127_1494649_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000004388 204.0
MMD3_k127_1494849_0 TRAP-type C4-dicarboxylate transport system periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 263.0
MMD3_k127_1494849_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000001782 218.0
MMD3_k127_1496584_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 488.0
MMD3_k127_1496584_1 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.00000000000000000000000006265 108.0
MMD3_k127_1496584_2 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000002748 109.0
MMD3_k127_1503847_0 PDZ domain (Also known as DHR or GLGF) K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 488.0
MMD3_k127_1503847_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 294.0
MMD3_k127_1503847_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 295.0
MMD3_k127_1505354_0 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000004946 143.0
MMD3_k127_1505354_1 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000004652 93.0
MMD3_k127_150548_0 Type II/IV secretion system protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 481.0
MMD3_k127_150548_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000986 464.0
MMD3_k127_150548_2 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002584 278.0
MMD3_k127_150548_3 HDOD domain - - - 0.00000000000000000000000000000000000184 150.0
MMD3_k127_150548_4 twitching motility protein K02669 - - 0.0000000000000000000000000009402 114.0
MMD3_k127_1517451_0 PFAM Glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 325.0
MMD3_k127_1517451_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 327.0
MMD3_k127_1522042_0 histidine kinase, HAMP K13598 - 2.7.13.3 5.235e-224 717.0
MMD3_k127_1522042_1 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 569.0
MMD3_k127_1522042_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 327.0
MMD3_k127_1522042_3 MaoC like domain - - - 0.000000000000000000000000000000000000000000009127 164.0
MMD3_k127_1522042_4 Helix-turn-helix domain - - - 0.0000000006281 69.0
MMD3_k127_1533800_0 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 337.0
MMD3_k127_1533800_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 263.0
MMD3_k127_1533800_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000005951 175.0
MMD3_k127_1533800_3 peptidyl-tyrosine sulfation - - - 0.00005438 54.0
MMD3_k127_1547541_0 hydrogenase large subunit K06281 - 1.12.99.6 9.649e-208 662.0
MMD3_k127_1547541_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 389.0
MMD3_k127_1547541_2 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 322.0
MMD3_k127_1547541_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000001341 234.0
MMD3_k127_1547541_4 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000005694 200.0
MMD3_k127_1547541_5 Histidine kinase HAMP K02482 - 2.7.13.3 0.000000000000000000000136 104.0
MMD3_k127_1553058_0 PFAM ATP-binding region, ATPase domain protein K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 318.0
MMD3_k127_1553058_1 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 287.0
MMD3_k127_1553058_2 DRTGG domain - - - 0.0000000000000000000000000001492 118.0
MMD3_k127_1558857_0 Elongator protein 3, MiaB family, Radical SAM - - - 1.036e-195 623.0
MMD3_k127_1558857_1 Protein of unknown function (DUF1847) - - - 0.00000000000000000000000000000000000000000000000000000000143 209.0
MMD3_k127_1558857_2 - - - - 0.000000000000008522 78.0
MMD3_k127_1558857_3 PFAM Type II secretion system protein E K02652 - - 0.000000000001713 74.0
MMD3_k127_1562433_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 363.0
MMD3_k127_1562433_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000007128 213.0
MMD3_k127_1566118_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 464.0
MMD3_k127_1566118_1 TIGRFAM glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 329.0
MMD3_k127_1566118_2 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 302.0
MMD3_k127_1566118_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000002631 222.0
MMD3_k127_1566118_4 phosphate transport regulator (Distant homolog of PhoU) K07220 - - 0.000000000000000000000000000000000000000000000000006544 187.0
MMD3_k127_1566118_5 Calcineurin-like phosphoesterase K01120,K03651 - 3.1.4.17,3.1.4.53 0.000000000000000000000000000000000000000000000003308 182.0
MMD3_k127_1566118_6 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000004152 176.0
MMD3_k127_1566118_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00001303 50.0
MMD3_k127_1573063_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000003853 232.0
MMD3_k127_1573063_1 heme binding - - - 0.0000000000000000000000000000000000000000007436 167.0
MMD3_k127_1573063_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000007755 71.0
MMD3_k127_1573063_3 Ankyrin repeats (many copies) - - - 0.0000002007 58.0
MMD3_k127_1579278_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 490.0
MMD3_k127_1579278_1 ABC-type sugar transport system periplasmic component K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 361.0
MMD3_k127_1579278_2 Carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 325.0
MMD3_k127_1579278_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 291.0
MMD3_k127_1579278_4 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000001806 177.0
MMD3_k127_1579278_5 Protein of unknown function (DUF3343) K13819 - - 0.0000000000008401 73.0
MMD3_k127_1579278_6 membrane K07794 - - 0.00002069 51.0
MMD3_k127_15842_0 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 500.0
MMD3_k127_15842_1 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 437.0
MMD3_k127_15842_2 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 361.0
MMD3_k127_15842_3 lactate racemase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004683 273.0
MMD3_k127_15842_4 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001481 253.0
MMD3_k127_15842_5 4Fe-4S binding domain - - - 0.00000000000000000000000000000004893 134.0
MMD3_k127_15842_6 PFAM Extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000007426 117.0
MMD3_k127_15842_7 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.0000000000001843 78.0
MMD3_k127_15842_8 Mo-molybdopterin cofactor metabolic process K03636 - - 0.0004135 46.0
MMD3_k127_1594509_0 Cytochrome c554 and c-prime - - - 8.458e-255 799.0
MMD3_k127_1594509_1 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 466.0
MMD3_k127_1594509_2 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 389.0
MMD3_k127_1594509_3 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 306.0
MMD3_k127_1594554_0 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 543.0
MMD3_k127_1594554_1 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.000000000000000000000000000000000000000000000000000000000000001545 231.0
MMD3_k127_1594554_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000001308 78.0
MMD3_k127_1594554_3 membrane K07794 - - 0.000000001093 60.0
MMD3_k127_1603775_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 303.0
MMD3_k127_1603775_1 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000002885 219.0
MMD3_k127_1614798_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 1.177e-236 738.0
MMD3_k127_1614798_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000995 194.0
MMD3_k127_163373_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 543.0
MMD3_k127_163373_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001614 283.0
MMD3_k127_163373_2 exodeoxyribonuclease I activity - - - 0.0000000000000000006893 89.0
MMD3_k127_1672622_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 3.789e-236 737.0
MMD3_k127_1672622_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 526.0
MMD3_k127_1672622_2 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 339.0
MMD3_k127_1672622_3 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002801 252.0
MMD3_k127_1672622_4 Thiamine biosynthesis protein (ThiI) - - - 0.00000000000000000000000000000000000000000000000000007261 190.0
MMD3_k127_1672622_5 sequence-specific DNA binding K18830 - - 0.00000000000000000000000000000000000000000000002498 174.0
MMD3_k127_1672622_6 Sulfurtransferase TusA K04085 - - 0.000000000000000000002336 97.0
MMD3_k127_1673808_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 386.0
MMD3_k127_1673808_1 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002014 230.0
MMD3_k127_1673808_2 TPM domain K08988 - - 0.000000000000000000000000000000000000000103 156.0
MMD3_k127_1674057_0 SCP-2 sterol transfer family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 308.0
MMD3_k127_1674057_1 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000003237 151.0
MMD3_k127_1674057_2 SCP-2 sterol transfer family - - - 0.000000000003663 67.0
MMD3_k127_1674057_3 Putative regulatory protein - - - 0.000000004605 60.0
MMD3_k127_1679021_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 522.0
MMD3_k127_1679021_1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000001013 152.0
MMD3_k127_1679021_2 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000009115 130.0
MMD3_k127_1682002_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.699e-258 810.0
MMD3_k127_1682002_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 453.0
MMD3_k127_1682002_2 isoprenoid biosynthetic process K00795,K02523,K13789 GO:0003674,GO:0003824,GO:0004161,GO:0004311,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033383,GO:0033384,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 331.0
MMD3_k127_1682002_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000006856 91.0
MMD3_k127_1682002_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000287 76.0
MMD3_k127_1682002_5 lipid kinase activity - - - 0.000000005963 58.0
MMD3_k127_1683_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 389.0
MMD3_k127_1683_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 374.0
MMD3_k127_1683_2 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000002097 88.0
MMD3_k127_1683648_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1089.0
MMD3_k127_1683648_1 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000002626 243.0
MMD3_k127_1697018_0 WG containing repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 306.0
MMD3_k127_1697018_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000001257 239.0
MMD3_k127_1697018_2 sequence-specific DNA binding K18830 - - 0.000000000000000000000000000000000000000003541 159.0
MMD3_k127_1697018_3 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000009012 149.0
MMD3_k127_1697018_4 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000000000000000000000000000000001554 149.0
MMD3_k127_1697018_5 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000005056 85.0
MMD3_k127_1748049_0 thiamine transport K02011 - - 1.285e-261 815.0
MMD3_k127_1748049_1 iron ion homeostasis K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 398.0
MMD3_k127_1760229_0 cell redox homeostasis - - - 3.276e-210 662.0
MMD3_k127_1760229_1 TIGRFAM methyltransferase MtaA CmuA family K01599 - 4.1.1.37 0.00000000000000000000000000000000000002005 154.0
MMD3_k127_1789384_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 461.0
MMD3_k127_1789384_1 flagellar motor switch protein FliM K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 338.0
MMD3_k127_1789384_2 FlhB HrpN YscU SpaS Family K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 325.0
MMD3_k127_1789384_3 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 298.0
MMD3_k127_1789384_4 flagellar biosynthetic protein FliR K02421 - - 0.000000000000000000000000000000000000000000001703 177.0
MMD3_k127_1789384_5 PFAM surface presentation of antigens (SPOA) protein K02417 - - 0.0000000000000000000000000000000000005091 142.0
MMD3_k127_1789384_6 Flagellar hook protein FlgE K02390 - - 0.0000000000000000000000000000004045 124.0
MMD3_k127_1789384_7 Role in flagellar biosynthesis K02420,K03227 - - 0.00000000000000000000001747 102.0
MMD3_k127_1789384_8 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000001549 101.0
MMD3_k127_1789384_9 flagellar K02418 - - 0.000000004782 63.0
MMD3_k127_1791629_0 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004719 242.0
MMD3_k127_1791629_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000006241 173.0
MMD3_k127_1803100_0 iron-sulfur cluster assembly K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 578.0
MMD3_k127_1803100_1 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 546.0
MMD3_k127_1803100_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007083 431.0
MMD3_k127_1803100_3 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002671 275.0
MMD3_k127_1803100_4 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000008436 186.0
MMD3_k127_1803100_5 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000002366 143.0
MMD3_k127_1803100_6 Iron-only hydrogenase system regulator - - - 0.000000000000000000000000000003674 121.0
MMD3_k127_1803100_7 DRTGG domain - - - 0.0000000000000000000000000007632 116.0
MMD3_k127_1803100_8 cheY-homologous receiver domain - - - 0.00000000000000000000000008645 113.0
MMD3_k127_180884_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000000000000000000000000000006552 240.0
MMD3_k127_180884_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000002372 149.0
MMD3_k127_180884_2 PFAM flagellar protein FliS K02422 - - 0.00000000000000000000000000001872 123.0
MMD3_k127_181240_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 602.0
MMD3_k127_181240_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000004686 150.0
MMD3_k127_181240_2 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.000000000000000000000000009338 111.0
MMD3_k127_181240_3 Tripartite tricarboxylate transporter TctB family - - - 0.000000005087 64.0
MMD3_k127_181240_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000001793 58.0
MMD3_k127_183131_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 1.837e-259 824.0
MMD3_k127_183131_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 3.408e-207 656.0
MMD3_k127_183131_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000007999 110.0
MMD3_k127_1835726_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 432.0
MMD3_k127_1835726_1 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000001452 194.0
MMD3_k127_1835726_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000000000000000000000000008646 134.0
MMD3_k127_1851166_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 377.0
MMD3_k127_1851166_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000003192 104.0
MMD3_k127_1876620_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 1.243e-254 798.0
MMD3_k127_1876620_1 ferredoxin oxidoreductase beta subunit K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 430.0
MMD3_k127_1876620_2 ferredoxin oxidoreductase alpha subunit K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000002312 177.0
MMD3_k127_1876620_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000756 177.0
MMD3_k127_189392_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 486.0
MMD3_k127_189392_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 300.0
MMD3_k127_189392_2 TIGRFAM Protein of - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000001104 109.0
MMD3_k127_189392_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000008905 78.0
MMD3_k127_189392_4 serine-type endopeptidase activity - - - 0.00000000000000648 86.0
MMD3_k127_1899654_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009473 577.0
MMD3_k127_1899654_1 TGS domain K06944 - - 0.00000000003117 63.0
MMD3_k127_1931681_0 Required for chromosome condensation and partitioning K03529 - - 1.303e-238 779.0
MMD3_k127_1931681_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 401.0
MMD3_k127_1931681_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0000000000000000000000000000000000000000001989 171.0
MMD3_k127_1931681_3 Late embryogenesis abundant protein - - - 0.00000003199 62.0
MMD3_k127_1931681_4 Metallo-beta-lactamase superfamily - - - 0.0004742 44.0
MMD3_k127_1932926_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 472.0
MMD3_k127_1932926_1 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000006321 227.0
MMD3_k127_1932926_2 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000002634 202.0
MMD3_k127_1932926_3 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000002089 184.0
MMD3_k127_1933385_0 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 374.0
MMD3_k127_1933385_1 BioY family K03523 - - 0.0000000000000000000000000000000000000000000000000002852 190.0
MMD3_k127_1933385_2 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000003884 108.0
MMD3_k127_1946371_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 597.0
MMD3_k127_1946371_1 HEAT repeats K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000004467 217.0
MMD3_k127_1946371_2 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000095 169.0
MMD3_k127_1946371_3 Enoyl-CoA hydratase/isomerase - - - 0.0003987 44.0
MMD3_k127_1947151_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 2.993e-201 633.0
MMD3_k127_1947151_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 523.0
MMD3_k127_1947151_10 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000003875 109.0
MMD3_k127_1947151_2 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 316.0
MMD3_k127_1947151_3 acetyl coenzyme A synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 312.0
MMD3_k127_1947151_4 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000002141 254.0
MMD3_k127_1947151_5 cobalamin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000017 254.0
MMD3_k127_1947151_6 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000441 244.0
MMD3_k127_1947151_7 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000705 241.0
MMD3_k127_1947151_8 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000001755 148.0
MMD3_k127_1947151_9 Rhodanese domain protein - - - 0.000000000000000000000000005781 115.0
MMD3_k127_1955678_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 4.892e-225 702.0
MMD3_k127_1955678_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 331.0
MMD3_k127_1955678_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000001826 184.0
MMD3_k127_1955678_3 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000005641 170.0
MMD3_k127_1955678_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000002324 128.0
MMD3_k127_1955678_5 PFAM ribosomal protein L30 K02907 - - 0.0000000000002022 72.0
MMD3_k127_195614_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 459.0
MMD3_k127_195614_1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 314.0
MMD3_k127_195614_2 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000425 215.0
MMD3_k127_195614_3 Periplasmic binding protein domain - - - 0.00000000000000000000000000000000000000000000000000000008915 209.0
MMD3_k127_1956329_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1016.0
MMD3_k127_1956329_1 Tetratricopeptide repeat K05807 - - 0.0000000000000000000000000000002564 128.0
MMD3_k127_1957131_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 470.0
MMD3_k127_1957131_1 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 341.0
MMD3_k127_1957131_2 CS domain K13993 - - 0.000000000000000000002958 99.0
MMD3_k127_1961715_0 ferrous iron transmembrane transporter activity K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 625.0
MMD3_k127_1961715_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 421.0
MMD3_k127_1961715_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 307.0
MMD3_k127_1961715_3 Amidohydrolase family - - - 0.000000000000000000000000000000000003298 143.0
MMD3_k127_1963332_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 342.0
MMD3_k127_1963332_1 Amidohydrolase family - - - 0.00000000000000000000000000000000008577 139.0
MMD3_k127_1963332_2 TIGRFAM MoaD family protein K03636 - - 0.0001415 48.0
MMD3_k127_1963698_0 Flavodoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 589.0
MMD3_k127_1963698_1 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006961 507.0
MMD3_k127_1963698_2 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 410.0
MMD3_k127_1963698_3 SMART AAA ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008141 286.0
MMD3_k127_1963698_4 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000006109 196.0
MMD3_k127_1963698_5 UPF0056 inner membrane protein K05595 - - 0.0000000000000000000000000000000000000000001675 166.0
MMD3_k127_1963698_6 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000004127 116.0
MMD3_k127_1967083_0 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 379.0
MMD3_k127_1967083_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000002504 194.0
MMD3_k127_1967083_2 Anion-transporting ATPase K07321 - - 0.00000000000000000000000000000000000000000697 166.0
MMD3_k127_1968300_0 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000456 195.0
MMD3_k127_1968300_1 pilus assembly protein PilW K02459 - - 0.000000000000000002574 94.0
MMD3_k127_1968300_2 Type II secretion system (T2SS), protein K K02460 - - 0.00000001832 56.0
MMD3_k127_1968300_3 Pfam:N_methyl_3 K02458 - - 0.000002593 55.0
MMD3_k127_1968300_4 general secretion pathway protein K02457 - - 0.00001802 53.0
MMD3_k127_1969101_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 485.0
MMD3_k127_1969101_1 PFAM iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003595 272.0
MMD3_k127_1974703_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004341 267.0
MMD3_k127_1974703_1 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000009975 109.0
MMD3_k127_1976212_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 1.543e-219 693.0
MMD3_k127_1976212_1 TIGRFAM lipopolysaccharide heptosyltransferase II K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001763 282.0
MMD3_k127_1976212_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000001911 273.0
MMD3_k127_1976212_3 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000003464 251.0
MMD3_k127_1977543_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 487.0
MMD3_k127_1977543_1 transporter, DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 313.0
MMD3_k127_1977543_2 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000006361 193.0
MMD3_k127_1977543_3 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519,K13479 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000104 171.0
MMD3_k127_1977543_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000001079 75.0
MMD3_k127_1977543_5 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.00000000003123 74.0
MMD3_k127_1981885_0 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 310.0
MMD3_k127_1981885_1 PFAM Prenyltransferase squalene oxidase - - - 0.0000000000000000000000000000000000000000000000000001074 190.0
MMD3_k127_1983573_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000003572 192.0
MMD3_k127_1983573_1 related to short-chain alcohol - - - 0.0000000000000000001623 91.0
MMD3_k127_198624_0 PFAM nitrite and sulphite reductase 4Fe-4S K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 582.0
MMD3_k127_198624_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 567.0
MMD3_k127_198624_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 335.0
MMD3_k127_198624_3 PFAM Dissimilatory sulfite reductase D - - - 0.0000004685 54.0
MMD3_k127_1987303_0 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 408.0
MMD3_k127_1987303_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.1,2.1.2.10,2.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 399.0
MMD3_k127_1987303_2 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000007818 99.0
MMD3_k127_1987303_3 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000000000001618 98.0
MMD3_k127_1987303_4 YqjK-like protein - - - 0.0000000000004942 73.0
MMD3_k127_1987303_5 LETM1-like protein - - - 0.00005235 51.0
MMD3_k127_1989076_0 basal body rod protein K02390 - - 0.0000000000000000000000000000000000000000000000000000000000002391 224.0
MMD3_k127_1989076_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.0000000000000000000000000000001829 134.0
MMD3_k127_1989076_2 bacterial-type flagellum assembly K02414 - - 0.000001221 61.0
MMD3_k127_1989076_3 Flagellar FliJ protein K02413 - - 0.000002067 55.0
MMD3_k127_2000666_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 413.0
MMD3_k127_2000666_1 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 310.0
MMD3_k127_2000666_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000003884 238.0
MMD3_k127_2000666_3 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.00000000000000000000000000000000000000003597 162.0
MMD3_k127_2000666_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0002177 44.0
MMD3_k127_200090_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 453.0
MMD3_k127_200090_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000003039 270.0
MMD3_k127_200090_2 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000002219 50.0
MMD3_k127_2002445_0 Domain of unknown function (DUF3390) K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 531.0
MMD3_k127_2002445_1 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 326.0
MMD3_k127_2002445_2 Pfam:DUF162 K00782 - - 0.00000000000000000000000000000000000000000000000000002898 195.0
MMD3_k127_2002445_3 Cysteine-rich domain K18928 - - 0.000000000000000000007456 93.0
MMD3_k127_2010214_0 AcrB/AcrD/AcrF family - - - 9.599e-274 872.0
MMD3_k127_2010214_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000001173 62.0
MMD3_k127_2024157_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 2.041e-195 619.0
MMD3_k127_2024157_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 582.0
MMD3_k127_2024157_10 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000003951 170.0
MMD3_k127_2024157_11 transcription regulator activity K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000008447 169.0
MMD3_k127_2024157_12 Cell division protein FtsL - - - 0.0000000000003194 74.0
MMD3_k127_2024157_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 507.0
MMD3_k127_2024157_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 491.0
MMD3_k127_2024157_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 460.0
MMD3_k127_2024157_5 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 375.0
MMD3_k127_2024157_6 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 362.0
MMD3_k127_2024157_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 351.0
MMD3_k127_2024157_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 292.0
MMD3_k127_2024157_9 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000001851 252.0
MMD3_k127_2029897_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 3.933e-283 883.0
MMD3_k127_2029897_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 437.0
MMD3_k127_2029897_2 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 288.0
MMD3_k127_2029897_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000002632 209.0
MMD3_k127_2029897_4 FecR protein - - - 0.000000000000000000000000000000000001781 146.0
MMD3_k127_2029897_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000002702 137.0
MMD3_k127_2029897_6 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000001678 130.0
MMD3_k127_2029897_7 Ribosomal protein L35 K02916 - - 0.000000000000000002955 85.0
MMD3_k127_2033892_0 Oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 598.0
MMD3_k127_2033892_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 450.0
MMD3_k127_2033892_10 - - - - 0.00000001552 59.0
MMD3_k127_2033892_2 PFAM short chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 321.0
MMD3_k127_2033892_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000007177 245.0
MMD3_k127_2033892_4 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000003246 226.0
MMD3_k127_2033892_5 Molybdopterin guanine dinucleotide synthesis protein B K03753,K13818 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000008633 226.0
MMD3_k127_2033892_6 PFAM Nitrate reductase delta subunit - - - 0.000000000000000000000000000006686 127.0
MMD3_k127_2033892_7 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000002204 121.0
MMD3_k127_2033892_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000003294 98.0
MMD3_k127_2033892_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000006261 70.0
MMD3_k127_2033920_0 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 318.0
MMD3_k127_2033920_1 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009769 274.0
MMD3_k127_2033920_2 Tripartite tricarboxylate transporter TctB family - - - 0.000000002439 61.0
MMD3_k127_2033920_3 protein conserved in bacteria - - - 0.00000004666 56.0
MMD3_k127_2035635_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 7.393e-205 650.0
MMD3_k127_2035635_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 350.0
MMD3_k127_2035635_2 Permease MlaE K02066 - - 0.00005047 47.0
MMD3_k127_2036826_0 Pyridoxal-dependent decarboxylase conserved domain K01634 - 4.1.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 482.0
MMD3_k127_2036826_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003819 272.0
MMD3_k127_2036826_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000007517 181.0
MMD3_k127_2045236_0 TIGRFAM flagellar hook-associated protein FlgK K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 308.0
MMD3_k127_2045236_1 Belongs to the bacterial flagellin family K02397 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000001279 153.0
MMD3_k127_2045236_2 FliW protein K13626 - - 0.0000000000000000000000000000000001832 136.0
MMD3_k127_2045236_3 Global regulator protein family K03563 - - 0.00000000000000008374 82.0
MMD3_k127_2045366_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 573.0
MMD3_k127_2045366_1 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003175 252.0
MMD3_k127_2045366_2 Histidine kinase - - - 0.00000000000000000000005529 105.0
MMD3_k127_2045656_0 Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring K01466 - 3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 438.0
MMD3_k127_2045656_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 311.0
MMD3_k127_2045656_2 Amidase, hydantoinase carbamoylase family K02083 - 3.5.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002027 289.0
MMD3_k127_2045656_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000008928 190.0
MMD3_k127_2048222_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 608.0
MMD3_k127_2048222_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 308.0
MMD3_k127_205534_0 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001528 264.0
MMD3_k127_205534_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001071 263.0
MMD3_k127_205534_2 Na -dependent transporter K03453 - - 0.00000000000000000000000001779 120.0
MMD3_k127_205534_3 ZIP Zinc transporter K07238 - - 0.000000000006262 66.0
MMD3_k127_205534_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000008957 74.0
MMD3_k127_205758_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 396.0
MMD3_k127_205758_1 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 355.0
MMD3_k127_205758_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005864 267.0
MMD3_k127_205758_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002589 269.0
MMD3_k127_205758_4 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000001032 212.0
MMD3_k127_205758_5 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000000000000000000000114 196.0
MMD3_k127_205758_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000001854 57.0
MMD3_k127_2057957_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 436.0
MMD3_k127_2057957_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 442.0
MMD3_k127_2057957_2 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 368.0
MMD3_k127_2057957_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 309.0
MMD3_k127_2057957_4 ammonia monooxygenase K07120 - - 0.00000001981 60.0
MMD3_k127_2065247_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000002357 197.0
MMD3_k127_2065247_1 polysaccharide deacetylase K01452 - 3.5.1.41 0.0000000000000000000000000000000000000000003313 166.0
MMD3_k127_2065247_2 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000002192 162.0
MMD3_k127_2065247_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634,K14166 - - 0.00000001167 66.0
MMD3_k127_2066795_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 477.0
MMD3_k127_2066795_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000005861 226.0
MMD3_k127_2066795_2 GGDEF domain K21009 - - 0.00000000000000000000000000000000000000001543 173.0
MMD3_k127_2066795_3 TIGRFAM general secretion pathway protein H K08084 - - 0.00000745 54.0
MMD3_k127_2072204_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 385.0
MMD3_k127_2072204_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000003129 244.0
MMD3_k127_2072204_2 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000001758 209.0
MMD3_k127_2072204_3 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000000000322 131.0
MMD3_k127_2072204_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000007852 57.0
MMD3_k127_2074779_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0030312,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 373.0
MMD3_k127_2074779_1 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000006313 195.0
MMD3_k127_2074779_2 pilus assembly protein PilW K02672 - - 0.00003945 54.0
MMD3_k127_2079160_0 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 596.0
MMD3_k127_2079160_1 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 367.0
MMD3_k127_2079160_2 ABC-type Fe3 transport system permease component - - - 0.000001783 52.0
MMD3_k127_2088252_0 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008785 264.0
MMD3_k127_2088252_1 branched-chain amino acid transmembrane transporter activity K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002796 253.0
MMD3_k127_2088252_2 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000001847 239.0
MMD3_k127_2088252_3 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000002994 242.0
MMD3_k127_2088252_4 with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000003131 233.0
MMD3_k127_2088252_5 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000006353 224.0
MMD3_k127_2088252_6 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.00000000000000000000000000000000000000000000000000000002058 205.0
MMD3_k127_2088252_7 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000002336 185.0
MMD3_k127_2088252_8 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000003386 156.0
MMD3_k127_2088611_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 526.0
MMD3_k127_2088611_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 382.0
MMD3_k127_2088611_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 376.0
MMD3_k127_2088611_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 286.0
MMD3_k127_2090482_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 8.076e-200 637.0
MMD3_k127_2090482_1 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000001377 233.0
MMD3_k127_2090482_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000003733 229.0
MMD3_k127_2090482_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000008481 217.0
MMD3_k127_2091315_0 TIGRFAM glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 - 1.1.5.3 7.433e-224 724.0
MMD3_k127_2093269_0 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 465.0
MMD3_k127_2093269_1 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.000000000000007432 77.0
MMD3_k127_2093269_2 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000001717 63.0
MMD3_k127_2093716_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 540.0
MMD3_k127_2093716_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 485.0
MMD3_k127_2093716_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 461.0
MMD3_k127_2093716_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 350.0
MMD3_k127_2093716_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000004105 138.0
MMD3_k127_2093716_5 Cytidylate kinase-like family K00760 - 2.4.2.8 0.0000000000000001839 84.0
MMD3_k127_2097117_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 450.0
MMD3_k127_2097117_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000003451 214.0
MMD3_k127_2097117_2 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000007207 108.0
MMD3_k127_2097117_3 Metallo-beta-lactamase superfamily - - - 0.000001086 54.0
MMD3_k127_2102729_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000371 287.0
MMD3_k127_2102729_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000006212 237.0
MMD3_k127_2102729_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001743 229.0
MMD3_k127_2102729_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000003071 131.0
MMD3_k127_2102729_4 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000006451 93.0
MMD3_k127_2102729_5 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000007788 74.0
MMD3_k127_2102729_6 SCP-2 sterol transfer family - - - 0.0000001593 63.0
MMD3_k127_2102729_7 Phosphatidylethanolamine-binding protein K06910 - - 0.000000237 53.0
MMD3_k127_2105565_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 540.0
MMD3_k127_2105565_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 424.0
MMD3_k127_2105565_2 Enoyl-CoA hydratase/isomerase K15016 - 1.1.1.35,4.2.1.17 0.00000000000000000000000000008526 120.0
MMD3_k127_2111207_0 Thermophilic metalloprotease (M29) - - - 0.00000000000000000000000000000000000000000000000000000000000003023 228.0
MMD3_k127_2111207_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000168 94.0
MMD3_k127_2114351_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K14534 - 4.2.1.120,5.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 608.0
MMD3_k127_2131388_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 561.0
MMD3_k127_2131388_1 conserved protein (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 418.0
MMD3_k127_2131388_2 Dehydrogenase K00005 - 1.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000001784 243.0
MMD3_k127_2131388_3 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000001001 237.0
MMD3_k127_2131388_4 oxidoreductase gamma subunit K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000008239 203.0
MMD3_k127_2131388_5 PFAM Pyruvate K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000002252 176.0
MMD3_k127_2131388_6 4Fe-4S binding domain K00176 - 1.2.7.3 0.0000000000000000000007701 96.0
MMD3_k127_2131388_7 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000001424 73.0
MMD3_k127_2131388_8 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.00000000005278 66.0
MMD3_k127_2138942_0 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 350.0
MMD3_k127_2138942_1 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 319.0
MMD3_k127_2138942_2 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000001267 188.0
MMD3_k127_2138956_0 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000009273 253.0
MMD3_k127_2138956_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000002781 153.0
MMD3_k127_2138956_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000002009 126.0
MMD3_k127_2138956_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000008664 69.0
MMD3_k127_2143859_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 2.616e-217 688.0
MMD3_k127_2143859_1 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000005868 277.0
MMD3_k127_2143859_2 Protein of unknown function (DUF1847) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001224 242.0
MMD3_k127_2143859_3 Hydrolyase tartrate alpha subunit fumarate domain protein Fe-S type K01676,K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000002372 232.0
MMD3_k127_2143859_4 )-tartrate dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000001871 216.0
MMD3_k127_2143859_5 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000000000001275 194.0
MMD3_k127_2152811_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1360.0
MMD3_k127_2152811_1 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 381.0
MMD3_k127_2152811_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000003756 161.0
MMD3_k127_2152811_3 - - - - 0.0000000002988 66.0
MMD3_k127_215529_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 381.0
MMD3_k127_215529_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 382.0
MMD3_k127_215529_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000002871 194.0
MMD3_k127_2156763_0 DEAD DEAH box helicase K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 538.0
MMD3_k127_2156763_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.000000000000000000000000000008293 123.0
MMD3_k127_2156763_2 protein N-acetylglucosaminyltransferase activity K12600 - - 0.00000005062 64.0
MMD3_k127_2159324_0 Neisseria PilC beta-propeller domain K02674 - - 0.000000000000000000000000000000000000000000000000000008385 218.0
MMD3_k127_2159837_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003662 283.0
MMD3_k127_2159837_1 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000002097 168.0
MMD3_k127_2159837_2 Sh3 type 3 domain protein - - - 0.000000000000000000000000003342 117.0
MMD3_k127_2162203_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000004062 210.0
MMD3_k127_2162203_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000016 215.0
MMD3_k127_2162203_2 Fumarase C-terminus K01678 - 4.2.1.2 0.00000000000000000000000000000000000000007986 159.0
MMD3_k127_2162203_3 Fe-S type, tartrate fumarate subfamily, alpha K01677 - 4.2.1.2 0.00000000000006646 73.0
MMD3_k127_2162203_4 YGGT family K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000001173 66.0
MMD3_k127_2162454_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 328.0
MMD3_k127_2162454_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000002829 137.0
MMD3_k127_2162454_2 myo-inosose-2 dehydratase activity K21909 - 5.1.3.38 0.0000000000000001071 84.0
MMD3_k127_2162836_0 4Fe-4S dicluster domain - - - 1.206e-304 939.0
MMD3_k127_2162836_1 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 441.0
MMD3_k127_2162836_2 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 371.0
MMD3_k127_2162836_3 - - - - 0.00000000000000000000000000000000000000000002276 165.0
MMD3_k127_2162836_4 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0001269 48.0
MMD3_k127_2162856_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 504.0
MMD3_k127_2162856_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000002407 180.0
MMD3_k127_2164392_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 387.0
MMD3_k127_2164392_1 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000000000000000000000000000002288 211.0
MMD3_k127_2164392_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000009969 179.0
MMD3_k127_2164392_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000001153 81.0
MMD3_k127_2168733_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 629.0
MMD3_k127_2168733_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 421.0
MMD3_k127_2168733_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 334.0
MMD3_k127_2168733_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000007834 217.0
MMD3_k127_2168733_4 Polypeptide deformylase K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000114 196.0
MMD3_k127_2174128_0 Permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 305.0
MMD3_k127_2174128_1 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000005641 153.0
MMD3_k127_2174128_2 Tetratricopeptide repeat - - - 0.00007346 55.0
MMD3_k127_2182290_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.106e-319 985.0
MMD3_k127_2182290_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 422.0
MMD3_k127_2182290_2 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 300.0
MMD3_k127_2182290_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001834 252.0
MMD3_k127_2182290_4 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000001164 53.0
MMD3_k127_2201470_0 cystathionine gamma-synthase activity K01739,K01740,K01760,K01761,K10764 - 2.5.1.48,2.5.1.49,4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000003566 263.0
MMD3_k127_2201470_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000004076 175.0
MMD3_k127_2201470_2 4Fe-4S double cluster binding domain - - - 0.00000000000000000003627 96.0
MMD3_k127_2220363_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 352.0
MMD3_k127_2220363_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 316.0
MMD3_k127_2220363_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000002824 83.0
MMD3_k127_2229394_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 353.0
MMD3_k127_2229394_1 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000001048 145.0
MMD3_k127_2229394_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000003466 149.0
MMD3_k127_2229394_3 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000004687 126.0
MMD3_k127_2229394_4 TonB C terminal K03832 - - 0.000000000000002181 89.0
MMD3_k127_2230566_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 596.0
MMD3_k127_2230566_1 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 561.0
MMD3_k127_2230566_2 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 348.0
MMD3_k127_2230566_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 290.0
MMD3_k127_2230566_4 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001126 242.0
MMD3_k127_2230566_5 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000155 196.0
MMD3_k127_2230566_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000008394 104.0
MMD3_k127_2235676_0 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 601.0
MMD3_k127_2235676_1 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000009368 264.0
MMD3_k127_2235676_2 Pyridoxal-phosphate dependent enzyme K05396,K17950 - 4.4.1.15,4.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000004068 270.0
MMD3_k127_2235676_3 Ornithine cyclodeaminase/mu-crystallin family - - - 0.000000000000000000000000000000000000000000000000000272 193.0
MMD3_k127_224645_0 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 361.0
MMD3_k127_224645_1 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 308.0
MMD3_k127_2249084_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 409.0
MMD3_k127_2249084_1 Zn-dependent protease - - - 0.00000000004942 73.0
MMD3_k127_2249733_0 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 7.637e-210 659.0
MMD3_k127_2249733_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.118e-206 653.0
MMD3_k127_2249733_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.47e-201 636.0
MMD3_k127_2249733_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006177 259.0
MMD3_k127_2249733_4 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000003257 250.0
MMD3_k127_2249733_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000001064 177.0
MMD3_k127_2249733_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000006648 109.0
MMD3_k127_2254468_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 559.0
MMD3_k127_2254468_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000022 96.0
MMD3_k127_2259910_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 406.0
MMD3_k127_2259910_1 peptidase M42 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 339.0
MMD3_k127_2259910_2 Divergent AAA domain protein K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000007022 210.0
MMD3_k127_2259910_3 PFAM TatD-related deoxyribonuclease K03424 - - 0.0000000000000000000000000000000000001519 151.0
MMD3_k127_2259910_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.00000000000000000000000000000001123 128.0
MMD3_k127_2260276_0 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 378.0
MMD3_k127_2260276_1 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 320.0
MMD3_k127_2260276_2 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000001611 239.0
MMD3_k127_2260276_3 Oxidoreductase NAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000003113 214.0
MMD3_k127_2260276_4 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000001329 162.0
MMD3_k127_2260276_5 PTS system fructose IIA component K02793 - 2.7.1.191 0.000000000000000000000000000000000000000003263 158.0
MMD3_k127_2260276_6 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000000001768 141.0
MMD3_k127_2261767_0 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 289.0
MMD3_k127_2261767_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000354 143.0
MMD3_k127_2264011_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 2.464e-194 618.0
MMD3_k127_2281545_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 4.269e-214 690.0
MMD3_k127_2281545_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001735 237.0
MMD3_k127_2292867_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 476.0
MMD3_k127_2292867_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.00000000000000000000000000000000000000000000000000001075 201.0
MMD3_k127_2292867_2 PFAM oxidoreductase domain protein - - - 0.00009641 49.0
MMD3_k127_2311146_0 TIGRFAM Small GTP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 563.0
MMD3_k127_2311146_1 Utp--glucose-1-phosphate uridylyltransferase K00972,K11442 - 2.7.7.23,2.7.7.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 499.0
MMD3_k127_2311146_2 class II (D K and N) K04568 - - 0.000000001043 59.0
MMD3_k127_2318821_0 Aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 494.0
MMD3_k127_2318821_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 460.0
MMD3_k127_2318821_2 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 332.0
MMD3_k127_2318821_3 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000000000000000000000000000007908 163.0
MMD3_k127_2318821_4 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000001439 147.0
MMD3_k127_2318821_5 DNA binding domain, excisionase family - - - 0.0000000000003333 74.0
MMD3_k127_2318821_6 Helix-turn-helix domain - - - 0.00000000002273 66.0
MMD3_k127_232458_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 423.0
MMD3_k127_232458_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 322.0
MMD3_k127_232458_10 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000236 138.0
MMD3_k127_232458_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000004425 134.0
MMD3_k127_232458_12 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000009162 115.0
MMD3_k127_232458_13 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000001419 119.0
MMD3_k127_232458_14 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000009902 70.0
MMD3_k127_232458_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001202 280.0
MMD3_k127_232458_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000001243 244.0
MMD3_k127_232458_4 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000001503 234.0
MMD3_k127_232458_5 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000855 221.0
MMD3_k127_232458_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001118 211.0
MMD3_k127_232458_7 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000043 180.0
MMD3_k127_232458_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000008034 171.0
MMD3_k127_232458_9 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000005019 156.0
MMD3_k127_2335118_0 protocatechuate 3,4-dioxygenase activity K03333 - 1.1.3.6 0.0000000000000000000000000000000000000000000000000000000000001297 229.0
MMD3_k127_2335118_1 Dehydratase family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000003503 159.0
MMD3_k127_2344029_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 351.0
MMD3_k127_2344029_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 335.0
MMD3_k127_2344029_2 ABC transporter permease K02034 - - 0.0000000000000000000000000000000000000009486 152.0
MMD3_k127_2344029_3 NMT1-like family K02051 - - 0.000000000000000000000001449 106.0
MMD3_k127_2356356_0 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 3.712e-212 679.0
MMD3_k127_2356356_1 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 347.0
MMD3_k127_2356356_2 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000008243 188.0
MMD3_k127_2357422_0 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 336.0
MMD3_k127_2357422_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 337.0
MMD3_k127_2357422_2 Putative Fe-S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005785 249.0
MMD3_k127_2357422_3 Sigma-70, region 4 - - - 0.00000000000000000000000000003076 123.0
MMD3_k127_2357422_4 toxin-antitoxin pair type II binding - - - 0.00000000000000000000000000009454 117.0
MMD3_k127_2357422_5 peroxiredoxin activity K01607 - 4.1.1.44 0.000000184 56.0
MMD3_k127_2357942_0 Fumarase C C-terminus K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 574.0
MMD3_k127_2357942_1 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000176 69.0
MMD3_k127_238697_0 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 428.0
MMD3_k127_238697_1 pyridine nucleotide-disulphide oxidoreductase dimerisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 368.0
MMD3_k127_238697_2 PFAM response regulator receiver - - - 0.0000000000000000000000000002815 120.0
MMD3_k127_238697_3 cheY-homologous receiver domain - - - 0.0002035 46.0
MMD3_k127_2389724_0 Belongs to the ClpX chaperone family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 589.0
MMD3_k127_2389724_1 heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 318.0
MMD3_k127_2389724_2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA - - - 0.00000000000001899 75.0
MMD3_k127_2390605_0 MmgE PrpD family protein K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 386.0
MMD3_k127_2390605_1 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001233 271.0
MMD3_k127_2390605_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000003279 168.0
MMD3_k127_2390605_3 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.000000000000000000000000000000000004082 146.0
MMD3_k127_2390605_4 COG2346, Truncated hemoglobins - - - 0.0000000000005755 71.0
MMD3_k127_2390605_5 Belongs to the LDH MDH superfamily. LDH family K00016,K00024 - 1.1.1.27,1.1.1.37 0.000000000208 63.0
MMD3_k127_2394945_0 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 342.0
MMD3_k127_2394945_1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 287.0
MMD3_k127_2394945_2 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.00000000000000000000000000000000000000000000000000004941 193.0
MMD3_k127_242065_0 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 343.0
MMD3_k127_242065_1 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 349.0
MMD3_k127_242065_2 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002219 271.0
MMD3_k127_242065_3 Xylose isomerase-like TIM barrel K22233 - - 0.000000000000003105 77.0
MMD3_k127_2425498_0 lactate/malate dehydrogenase, alpha/beta C-terminal domain K00016,K00024 - 1.1.1.27,1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 355.0
MMD3_k127_2425498_1 hmm pf01266 K00244 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000003788 245.0
MMD3_k127_2425498_2 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000000003113 146.0
MMD3_k127_2438706_0 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 358.0
MMD3_k127_2438706_1 Putative regulatory protein - - - 0.000000000000000000000000000000001709 133.0
MMD3_k127_2438706_2 - - - - 0.000000000000001741 78.0
MMD3_k127_2438706_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000001425 70.0
MMD3_k127_2439175_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 396.0
MMD3_k127_2439175_1 acetyl coenzyme A synthetase - - - 0.00000000000000000000000000000000000000000000000000000000002559 212.0
MMD3_k127_2439175_2 Cysteine dioxygenase type I - - - 0.000000000000000000000001483 108.0
MMD3_k127_2442530_0 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002661 252.0
MMD3_k127_2442530_1 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000005714 224.0
MMD3_k127_2452306_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 369.0
MMD3_k127_2452306_1 COG0857 BioD-like N-terminal domain of phosphotransacetylase K06873 - - 0.0000000000000000000000000002492 127.0
MMD3_k127_2452306_2 denitrification pathway - - - 0.00000000000004508 80.0
MMD3_k127_2452306_3 - - - - 0.00000000953 60.0
MMD3_k127_2493442_0 Thiamine-phosphate synthase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 420.0
MMD3_k127_2494427_0 electron transfer flavoprotein K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000006566 272.0
MMD3_k127_2494427_1 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000000000000000004625 172.0
MMD3_k127_2494427_2 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000002815 78.0
MMD3_k127_2494427_3 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.000000006336 59.0
MMD3_k127_2498806_0 PFAM CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 413.0
MMD3_k127_2513_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 507.0
MMD3_k127_2513_1 TIGRFAM geranylgeranyl reductase family K21401 - 1.3.99.38 0.0000000000000000000000000000000000000000000000001485 191.0
MMD3_k127_2513_2 ACT domain K00003,K00928,K12524 - 1.1.1.3,2.7.2.4 0.00000000000000000000000000000000000001622 148.0
MMD3_k127_25306_0 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 358.0
MMD3_k127_25306_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000017 172.0
MMD3_k127_2544100_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.245e-220 698.0
MMD3_k127_2544100_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 501.0
MMD3_k127_2566981_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 368.0
MMD3_k127_2566981_1 Pyruvate kinase, alpha/beta domain K09126 - - 0.0000000000002171 76.0
MMD3_k127_2574751_0 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 396.0
MMD3_k127_2574751_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 377.0
MMD3_k127_2574751_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000004903 123.0
MMD3_k127_2574751_3 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.00000000000000000000000005459 118.0
MMD3_k127_2574751_4 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000008686 96.0
MMD3_k127_2574801_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.43e-242 763.0
MMD3_k127_2576753_0 Coenzyme A transferase K01026 - 2.8.3.1 5.76e-281 879.0
MMD3_k127_2576753_1 Universal stress protein family - - - 0.0000000000000000000000000000000000004769 145.0
MMD3_k127_2576753_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000004851 66.0
MMD3_k127_2578089_0 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 555.0
MMD3_k127_2578089_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 453.0
MMD3_k127_2578089_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 413.0
MMD3_k127_2578089_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000001317 104.0
MMD3_k127_2578089_4 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.0000000000000000000004136 98.0
MMD3_k127_2578089_5 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000002826 81.0
MMD3_k127_2578089_6 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000009827 78.0
MMD3_k127_2582716_0 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004288 281.0
MMD3_k127_2582716_1 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000437 220.0
MMD3_k127_2582716_2 Fimbrial assembly protein (PilN) K02461 - - 0.0000000000000000000000000000000000000000000001155 186.0
MMD3_k127_2582716_3 Type II secretion system (T2SS), protein M subtype b K02462 - - 0.0000001153 62.0
MMD3_k127_2586881_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 1.659e-255 806.0
MMD3_k127_2586881_1 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 388.0
MMD3_k127_2586881_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 313.0
MMD3_k127_2586881_3 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002356 287.0
MMD3_k127_2586881_4 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000002229 218.0
MMD3_k127_2586881_5 - - - - 0.0000009381 53.0
MMD3_k127_2587808_0 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 469.0
MMD3_k127_2587808_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 385.0
MMD3_k127_2587808_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000003788 198.0
MMD3_k127_2587808_3 protein conserved in bacteria K07793 - - 0.0000000000000000000007112 97.0
MMD3_k127_2589653_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 409.0
MMD3_k127_2589653_1 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000004636 257.0
MMD3_k127_259096_0 tungstate binding K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 344.0
MMD3_k127_259096_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 303.0
MMD3_k127_259096_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000006047 270.0
MMD3_k127_259096_3 molybdate abc transporter K02018,K15496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001739 252.0
MMD3_k127_259096_4 PFAM ABC transporter K02010,K02017,K15497 - 3.6.3.29,3.6.3.30,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000002989 229.0
MMD3_k127_259096_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000008539 175.0
MMD3_k127_259096_6 Bacterial regulatory helix-turn-helix protein, lysR family K02019,K05772 - - 0.0000000000000000000000003879 109.0
MMD3_k127_259096_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.00004165 46.0
MMD3_k127_2591378_0 Histidine kinase HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 462.0
MMD3_k127_2591378_1 ThiS family - - - 0.000000001074 62.0
MMD3_k127_2603503_0 Peptidase family M41 K03798 - - 5.683e-296 919.0
MMD3_k127_2603503_1 acr, cog1565 - - - 0.000000000008076 73.0
MMD3_k127_2603503_2 SMART Elongator protein 3 MiaB NifB - - - 0.0005817 44.0
MMD3_k127_2612802_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 384.0
MMD3_k127_2612802_1 Radical SAM superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 302.0
MMD3_k127_2613533_0 Ftsk_gamma K03466 - - 1.509e-222 712.0
MMD3_k127_2613533_1 Peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000003871 134.0
MMD3_k127_2613533_2 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000816 135.0
MMD3_k127_2614807_0 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 301.0
MMD3_k127_2614807_1 PFAM ABC transporter related K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 287.0
MMD3_k127_2614807_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002157 263.0
MMD3_k127_2614807_3 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002145 259.0
MMD3_k127_2614807_4 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004123 249.0
MMD3_k127_2614807_5 myo-inosose-2 dehydratase activity K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000004073 233.0
MMD3_k127_2614807_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000009002 219.0
MMD3_k127_2614807_7 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000006991 213.0
MMD3_k127_2614807_8 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.00000000000000000000000000000000000000000000000000001472 207.0
MMD3_k127_2614807_9 Periplasmic binding protein domain K01999 - - 0.000001289 53.0
MMD3_k127_2615350_0 PFAM AMP-dependent synthetase and ligase K01895,K08295 - 6.2.1.1,6.2.1.32 3.339e-266 828.0
MMD3_k127_2615350_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000001044 241.0
MMD3_k127_2617882_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 566.0
MMD3_k127_2617882_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000002739 198.0
MMD3_k127_2618076_0 Belongs to the RtcB family K14415 - 6.5.1.3 3.755e-216 681.0
MMD3_k127_2618076_1 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 7.091e-197 635.0
MMD3_k127_2618076_2 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000001205 152.0
MMD3_k127_2618076_3 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 - - 0.00000000000004767 82.0
MMD3_k127_2624552_0 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 557.0
MMD3_k127_2624552_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009987,GO:0009991,GO:0016036,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0034654,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005147 286.0
MMD3_k127_2624552_2 Male sterility protein - - - 0.000000000000009918 79.0
MMD3_k127_2624552_3 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.000000002313 58.0
MMD3_k127_2626478_0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 371.0
MMD3_k127_2626478_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 332.0
MMD3_k127_2626478_2 Ndr family K00433,K01055 - 1.11.1.10,3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000002367 232.0
MMD3_k127_2626478_3 cysteine-tRNA ligase activity - - - 0.000000000006347 68.0
MMD3_k127_2626478_4 PFAM type II secretion system protein E K02652 - - 0.0003402 51.0
MMD3_k127_2629924_0 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 529.0
MMD3_k127_2629924_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 456.0
MMD3_k127_2629924_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 388.0
MMD3_k127_2629924_3 PFAM sodium sulphate symporter K03319 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 308.0
MMD3_k127_2629924_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000007952 177.0
MMD3_k127_2629924_5 PFAM Cyclic nucleotide-binding domain - - - 0.00000007114 62.0
MMD3_k127_2633677_0 Coenzyme A transferase K01026 - 2.8.3.1 2.023e-198 631.0
MMD3_k127_2633677_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 561.0
MMD3_k127_2633677_2 amp-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 435.0
MMD3_k127_2633677_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 398.0
MMD3_k127_2633677_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000001052 145.0
MMD3_k127_2633677_5 MaoC like domain K17865 - 4.2.1.55 0.000000000000000000000000000000000001231 143.0
MMD3_k127_2633677_6 amidohydrolase 2 - - - 0.00000000000000000000000000000000003169 136.0
MMD3_k127_2633718_0 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 543.0
MMD3_k127_2633718_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 464.0
MMD3_k127_2633718_2 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008389 239.0
MMD3_k127_2633718_3 amidohydrolase 2 - - - 0.0000000000000000000000000000000001032 134.0
MMD3_k127_2633930_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 450.0
MMD3_k127_2633930_1 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 406.0
MMD3_k127_2633930_2 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 363.0
MMD3_k127_2633930_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001577 254.0
MMD3_k127_2636178_0 PFAM Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004516 289.0
MMD3_k127_2636178_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00189 - 1.2.7.1,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000008353 229.0
MMD3_k127_2636178_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000003045 188.0
MMD3_k127_2636178_3 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000008003 142.0
MMD3_k127_2637516_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 462.0
MMD3_k127_2637516_1 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 338.0
MMD3_k127_2637516_2 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002742 253.0
MMD3_k127_2641200_0 acetamidase formamidase K01455 - 3.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 314.0
MMD3_k127_2641200_1 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000002203 218.0
MMD3_k127_2641200_2 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.00000000000000000000000004621 115.0
MMD3_k127_2645462_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 354.0
MMD3_k127_2645462_1 SNARE-like domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000109 246.0
MMD3_k127_2645462_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000009535 201.0
MMD3_k127_2645462_3 phosphosulfolactate synthase activity K08097 - 4.4.1.19 0.00000000000000000000000000000000000000000000000000004678 198.0
MMD3_k127_2645462_4 Protein conserved in bacteria K07793 - - 0.0000000000000000000000000000000000000000003202 162.0
MMD3_k127_2645462_5 Rhodanese Homology Domain K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.00000000000000000000000009439 108.0
MMD3_k127_2649997_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 8.227e-236 745.0
MMD3_k127_2649997_1 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 406.0
MMD3_k127_2649997_2 helix_turn _helix lactose operon repressor K02529,K03435 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 312.0
MMD3_k127_26541_0 transporter, permease K02050,K15552 - - 0.000000000000000000000000000000000000000000000000000000000000000000002674 244.0
MMD3_k127_26541_1 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000314 253.0
MMD3_k127_26541_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003652 243.0
MMD3_k127_26541_3 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.00000000000000000000000000000000002642 141.0
MMD3_k127_26541_4 ABC transporter substrate-binding protein K02051,K15551 - - 0.0000000000000000000000000006525 128.0
MMD3_k127_265435_0 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006202 479.0
MMD3_k127_265435_1 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000008789 203.0
MMD3_k127_265435_2 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000000000000000000000000000000002573 197.0
MMD3_k127_265435_3 PFAM Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000006925 150.0
MMD3_k127_265435_4 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000002462 150.0
MMD3_k127_265435_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000003871 128.0
MMD3_k127_265435_6 Rubrerythrin - - - 0.0003847 46.0
MMD3_k127_2655619_0 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 520.0
MMD3_k127_2655619_1 COG0444 ABC-type dipeptide oligopeptide nickel transport system, ATPase component K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 449.0
MMD3_k127_2655619_2 COG4608 ABC-type oligopeptide transport system, ATPase component K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 443.0
MMD3_k127_2655619_3 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 428.0
MMD3_k127_2655619_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 414.0
MMD3_k127_2660863_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 385.0
MMD3_k127_2660863_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 379.0
MMD3_k127_2660863_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 330.0
MMD3_k127_2660863_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002387 270.0
MMD3_k127_2660863_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000004202 147.0
MMD3_k127_2660863_5 PFAM Histone deacetylase - - - 0.000000000000000000004283 96.0
MMD3_k127_2660863_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.00000000000000047 85.0
MMD3_k127_2679146_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 4.645e-290 913.0
MMD3_k127_2679146_1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 461.0
MMD3_k127_2679146_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003222 280.0
MMD3_k127_2679146_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000679 273.0
MMD3_k127_2685583_0 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000009914 186.0
MMD3_k127_2685583_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000003657 171.0
MMD3_k127_2687046_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001001 288.0
MMD3_k127_2687046_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000004914 202.0
MMD3_k127_2688613_0 L-phenylalanine transmembrane transporter activity K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 364.0
MMD3_k127_2688613_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 317.0
MMD3_k127_2688613_2 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003517 253.0
MMD3_k127_2688613_3 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000004942 141.0
MMD3_k127_2694899_0 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 453.0
MMD3_k127_2694899_1 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009498 270.0
MMD3_k127_2694899_2 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000002361 194.0
MMD3_k127_2694899_3 Protein of unknown function (DUF4013) - - - 0.000000001165 68.0
MMD3_k127_2698638_0 PFAM Dynamin family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004075 275.0
MMD3_k127_2698638_1 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000025 165.0
MMD3_k127_2698638_2 Permeases of the major facilitator superfamily K08153 - - 0.00000000001209 76.0
MMD3_k127_2700046_0 IMP dehydrogenase activity K03406,K15371 - 1.4.1.2 1.943e-219 698.0
MMD3_k127_2700046_1 Psort location CytoplasmicMembrane, score K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 323.0
MMD3_k127_2700046_2 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 308.0
MMD3_k127_2702145_0 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 510.0
MMD3_k127_2702778_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 303.0
MMD3_k127_2702778_1 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001023 259.0
MMD3_k127_2702778_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000004998 64.0
MMD3_k127_2703213_0 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 591.0
MMD3_k127_2703213_1 Dihydroorotate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 338.0
MMD3_k127_2703213_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000001299 160.0
MMD3_k127_2703213_3 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000000000000000000005824 133.0
MMD3_k127_2703213_4 ATP-independent chaperone mediated protein folding K06006 - - 0.000001139 57.0
MMD3_k127_2703213_5 - - - - 0.0002285 50.0
MMD3_k127_2703213_6 metallopeptidase activity - - - 0.000391 51.0
MMD3_k127_2708733_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.096e-204 646.0
MMD3_k127_2708733_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 449.0
MMD3_k127_2708733_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 456.0
MMD3_k127_2708733_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 338.0
MMD3_k127_2708733_4 Cytidylate kinase K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000001107 227.0
MMD3_k127_2708733_5 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002503 226.0
MMD3_k127_2711626_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 447.0
MMD3_k127_2711626_1 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000002463 209.0
MMD3_k127_2711626_2 GlcNAc-PI de-N-acetylase K22408 - - 0.00000000000007416 81.0
MMD3_k127_2711626_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000005068 69.0
MMD3_k127_2711874_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 2.212e-207 660.0
MMD3_k127_2711874_1 Phosphoenolpyruvate hydrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 299.0
MMD3_k127_2711874_2 Amino acid ABC transporter ATPase K01996 - - 0.00000000000000000000000000000000000000000000001024 175.0
MMD3_k127_2741723_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 4.88e-199 647.0
MMD3_k127_2741723_1 ATPase domain of DNA mismatch repair MUTS family K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006599 501.0
MMD3_k127_2741723_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 477.0
MMD3_k127_2741723_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 453.0
MMD3_k127_2741723_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 377.0
MMD3_k127_2741723_5 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 358.0
MMD3_k127_2741723_6 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000003551 268.0
MMD3_k127_2741723_7 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000001118 149.0
MMD3_k127_2741723_8 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000002819 105.0
MMD3_k127_275355_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.587e-205 650.0
MMD3_k127_275355_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 426.0
MMD3_k127_275355_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000001096 231.0
MMD3_k127_275355_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000268 197.0
MMD3_k127_275355_4 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0000000000009113 76.0
MMD3_k127_2758783_0 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000003424 217.0
MMD3_k127_2758783_1 EamA-like transporter family K03298 - - 0.000000000000005877 83.0
MMD3_k127_2764532_0 Pro-kumamolisin, activation domain - - - 2.201e-198 631.0
MMD3_k127_2764532_1 choline dehydrogenase activity K03333 - 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 377.0
MMD3_k127_2769338_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 611.0
MMD3_k127_2769338_1 Beta-Casp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 299.0
MMD3_k127_2769338_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000002241 126.0
MMD3_k127_2769338_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000003025 113.0
MMD3_k127_2769338_4 cold-shock protein K03704 - - 0.00000000000000000000002291 102.0
MMD3_k127_2774496_0 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 391.0
MMD3_k127_2774496_1 Domain of unknown function (DUF4178) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002207 246.0
MMD3_k127_2774496_2 - - - - 0.000000001106 62.0
MMD3_k127_2774496_3 Domain of Unknown Function (DUF350) - - - 0.000000001211 60.0
MMD3_k127_2791853_0 family UPF0027 K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 315.0
MMD3_k127_2791853_1 RNA-binding protein homologous to eukaryotic snRNP - - - 0.00000009937 65.0
MMD3_k127_2794391_0 oxidoreductase K00010,K16043 - 1.1.1.18,1.1.1.369,1.1.1.370 0.0000000000000000000000000000000000000000000000000000002068 207.0
MMD3_k127_2794391_1 Creatinase/Prolidase N-terminal domain K01271,K15783 - 3.4.13.9,3.5.4.44 0.000000000000000000000000000000000001148 150.0
MMD3_k127_2795364_0 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 2.553e-197 635.0
MMD3_k127_2795364_1 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 367.0
MMD3_k127_2795364_2 Tripartite tricarboxylate transporter TctB family - - - 0.0000000007154 66.0
MMD3_k127_2811694_0 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.00000000000000000000000000000000000000001139 159.0
MMD3_k127_2811694_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000001159 122.0
MMD3_k127_2811694_2 PHP family - - - 0.00000000003217 71.0
MMD3_k127_2836435_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 389.0
MMD3_k127_2836435_1 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002749 274.0
MMD3_k127_2836435_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000001674 191.0
MMD3_k127_2836435_3 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000004123 170.0
MMD3_k127_2836435_4 GDYXXLXY protein - - - 0.00000000000000008584 90.0
MMD3_k127_2847488_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.41e-216 692.0
MMD3_k127_2847488_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 449.0
MMD3_k127_2847488_2 AIR synthase related protein, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 335.0
MMD3_k127_2847488_3 - - - - 0.00000001863 59.0
MMD3_k127_2847725_0 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003263 255.0
MMD3_k127_2847725_1 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000005118 169.0
MMD3_k127_2847725_2 YhhN family - - - 0.000000000000004719 79.0
MMD3_k127_2847725_3 - - - - 0.00000001204 63.0
MMD3_k127_2850340_0 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 539.0
MMD3_k127_2850340_1 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 361.0
MMD3_k127_2850340_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000001059 213.0
MMD3_k127_2850340_3 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000004329 144.0
MMD3_k127_285087_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520,K18020 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0043546,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363 1.2.5.3,1.2.99.8 5.844e-201 651.0
MMD3_k127_285087_1 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519,K18021 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.5.3,1.2.99.8 0.000000000000000000000000000000000000000000000000000000000000000003923 235.0
MMD3_k127_285087_2 [2Fe-2S] binding domain - - - 0.0000000000000000000000000000000000000000000000002186 181.0
MMD3_k127_285087_3 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K20448 - 1.17.1.5 0.0000000000000000000000000000000000001581 146.0
MMD3_k127_285087_4 Probable molybdopterin binding domain - - - 0.000001727 54.0
MMD3_k127_2851652_0 Uncharacterised protein family (UPF0261) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 330.0
MMD3_k127_2851652_1 Alcohol dehydrogenase GroES-like domain K00008,K08322 - 1.1.1.14,1.1.1.380 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 310.0
MMD3_k127_2851652_2 mevalonate kinase activity K00869,K15633 GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016126,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653 2.7.1.36,5.4.2.12 0.0000000000000000000000000000000000000000000000000001388 197.0
MMD3_k127_2851652_3 Cupin domain - - - 0.00000001996 60.0
MMD3_k127_2853362_0 glycyl-tRNA aminoacylation K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 531.0
MMD3_k127_2861889_0 ATPase associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 429.0
MMD3_k127_2861889_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001772 298.0
MMD3_k127_2861889_2 nuclear chromosome segregation - - - 0.0000004229 57.0
MMD3_k127_2865815_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005734 274.0
MMD3_k127_2865815_1 Thioredoxin-like K02199 - - 0.0000000000000000000000000000006545 128.0
MMD3_k127_2865815_2 Nitrogen-fixing NifU domain protein - - - 0.00000000000000000000000005109 110.0
MMD3_k127_2865815_3 4Fe-4S binding domain - - - 0.00000000000000000000009086 98.0
MMD3_k127_2865815_4 Domain of unknown function (DUF1858) - - - 0.000000000000003598 78.0
MMD3_k127_2869902_0 Psort location CytoplasmicMembrane, score - - - 2.741e-223 719.0
MMD3_k127_2869902_1 Dihydroorotate dehydrogenase K00226,K17723 - 1.3.1.1,1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 450.0
MMD3_k127_2869902_2 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000383 218.0
MMD3_k127_2869902_3 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.000000000000000000000000000000000000000000000000001704 186.0
MMD3_k127_2869902_4 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000008541 173.0
MMD3_k127_2876598_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 413.0
MMD3_k127_2876598_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 350.0
MMD3_k127_2876598_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000002831 166.0
MMD3_k127_2876598_3 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000001085 139.0
MMD3_k127_2882317_0 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 295.0
MMD3_k127_2882317_1 ABC transporter substrate-binding protein - - - 0.00000000000000000000000000000000000000066 160.0
MMD3_k127_2882317_2 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00000000003025 72.0
MMD3_k127_2897475_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.336e-252 799.0
MMD3_k127_2897475_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000005323 134.0
MMD3_k127_2897475_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000001101 116.0
MMD3_k127_2901175_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 574.0
MMD3_k127_2901175_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000256 274.0
MMD3_k127_2901175_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000003332 252.0
MMD3_k127_2901175_3 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000881 193.0
MMD3_k127_2905757_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 441.0
MMD3_k127_2905757_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 399.0
MMD3_k127_2905757_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006401 261.0
MMD3_k127_2905757_3 PFAM Pyruvate ketoisovalerate oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000001632 192.0
MMD3_k127_2905757_4 4Fe-4S binding domain K00176 - 1.2.7.3 0.000000000000000000008409 93.0
MMD3_k127_2927717_0 Bacterial extracellular solute-binding protein K02012 - - 2.437e-198 623.0
MMD3_k127_2927717_1 BFD domain protein 2Fe-2S -binding domain protein K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 471.0
MMD3_k127_2927717_2 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 310.0
MMD3_k127_2927717_3 TOBE domain K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000003305 264.0
MMD3_k127_2927717_4 TIGRFAM Glycerol-3-phosphate dehydrogenase, anaerobic B subunit K00112 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001257 267.0
MMD3_k127_2927717_5 Glycerol-3-phosphate dehydrogenase K00113,K18930 - 1.1.5.3 0.0000000000000002992 79.0
MMD3_k127_2930582_0 family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 403.0
MMD3_k127_2930582_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000008166 61.0
MMD3_k127_2963701_0 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 8.86e-280 885.0
MMD3_k127_2963701_1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 439.0
MMD3_k127_2963701_2 integrase domain protein SAM domain protein K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007939 308.0
MMD3_k127_2963701_3 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.00000000000000000000000009198 109.0
MMD3_k127_2976823_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01615 - 4.1.1.70 1.096e-303 938.0
MMD3_k127_2976823_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000011 164.0
MMD3_k127_2976823_2 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000004659 154.0
MMD3_k127_2976823_3 Receptor family ligand binding region - - - 0.000000005398 60.0
MMD3_k127_2995918_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 515.0
MMD3_k127_2995918_1 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 512.0
MMD3_k127_2995918_2 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 487.0
MMD3_k127_2995918_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002971 252.0
MMD3_k127_2995918_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000115 147.0
MMD3_k127_3009796_0 PFAM Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 304.0
MMD3_k127_3009796_1 Protein conserved in bacteria K09986 - - 0.00000000000000000000000006387 112.0
MMD3_k127_3009796_2 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000000004855 87.0
MMD3_k127_30686_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 565.0
MMD3_k127_30686_1 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 524.0
MMD3_k127_30686_2 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 325.0
MMD3_k127_30686_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000001148 201.0
MMD3_k127_30686_4 membrane K07794 - - 0.000000000000000003311 91.0
MMD3_k127_30686_6 CoA binding domain K09181 - - 0.0001157 50.0
MMD3_k127_3069585_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006473 286.0
MMD3_k127_3069585_1 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000008452 199.0
MMD3_k127_3069585_2 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000376 160.0
MMD3_k127_3073603_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 313.0
MMD3_k127_3073603_1 Pfam Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000005861 271.0
MMD3_k127_3073603_2 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000001846 244.0
MMD3_k127_3073603_3 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000004543 126.0
MMD3_k127_3080649_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 484.0
MMD3_k127_3080649_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 355.0
MMD3_k127_3080649_2 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004712 265.0
MMD3_k127_3080649_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000002867 168.0
MMD3_k127_3080649_4 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00007796 47.0
MMD3_k127_3113246_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1132.0
MMD3_k127_3113246_1 Tim44 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002166 256.0
MMD3_k127_3113246_2 Major Facilitator Superfamily - - - 0.000000000000000000001099 108.0
MMD3_k127_3113246_3 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000001003 77.0
MMD3_k127_3129758_0 Large extracellular alpha-helical protein K06894 - - 0.0 1668.0
MMD3_k127_318640_0 metal ion transmembrane transporter activity K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 509.0
MMD3_k127_318640_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 454.0
MMD3_k127_318640_2 reductase II K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000007354 190.0
MMD3_k127_318640_3 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000003405 173.0
MMD3_k127_3196155_0 glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 476.0
MMD3_k127_3196155_1 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 479.0
MMD3_k127_3211649_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 455.0
MMD3_k127_3211649_1 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000000000000000000000007094 198.0
MMD3_k127_3216760_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006571 257.0
MMD3_k127_3216760_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000005727 264.0
MMD3_k127_3216760_2 PFAM Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000002656 249.0
MMD3_k127_3216760_3 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000004963 171.0
MMD3_k127_3217671_0 Extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 465.0
MMD3_k127_3217671_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 347.0
MMD3_k127_3217671_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000007457 211.0
MMD3_k127_3218843_0 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K01683 - 4.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000003865 248.0
MMD3_k127_3218843_1 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000000004759 181.0
MMD3_k127_3218843_2 AAA domain K02450 - - 0.000000000000000000000000008776 117.0
MMD3_k127_3223908_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 478.0
MMD3_k127_3223908_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001111 262.0
MMD3_k127_3223908_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000001875 143.0
MMD3_k127_3223908_3 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000004984 117.0
MMD3_k127_3223908_4 4Fe-4S dicluster domain K00196,K05796 - - 0.000000000000000000000007615 108.0
MMD3_k127_3223908_5 Prismane/CO dehydrogenase family K00198 - 1.2.7.4 0.000000000000009209 86.0
MMD3_k127_3225526_0 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 314.0
MMD3_k127_3225526_1 transferase activity, transferring glycosyl groups K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 297.0
MMD3_k127_3225526_2 PFAM glycosyl transferase, family 9 K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 292.0
MMD3_k127_3225526_3 family 9 - - - 0.0000000000000000000000000000000000000000003304 172.0
MMD3_k127_3225526_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000009719 117.0
MMD3_k127_3225526_5 Glycosyl transferase family 2 K12984 - - 0.000000005667 58.0
MMD3_k127_3225629_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 553.0
MMD3_k127_3225629_1 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 360.0
MMD3_k127_3225629_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 357.0
MMD3_k127_3225629_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000001721 164.0
MMD3_k127_3225629_4 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000008502 97.0
MMD3_k127_3225629_5 PFAM ThiamineS - - - 0.0000000001581 64.0
MMD3_k127_3225629_6 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000007383 63.0
MMD3_k127_3225629_7 6-phosphogluconate dehydrogenase K00042 - 1.1.1.60 0.0000004005 51.0
MMD3_k127_3226061_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.613e-244 765.0
MMD3_k127_3226061_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 555.0
MMD3_k127_3226061_2 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000004458 233.0
MMD3_k127_3228343_0 Tripartite tricarboxylate transporter TctA family K07793 - - 5.539e-208 657.0
MMD3_k127_3228343_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 621.0
MMD3_k127_3228343_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 349.0
MMD3_k127_3228343_3 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 316.0
MMD3_k127_3228343_4 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000001554 137.0
MMD3_k127_3228343_5 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000005527 115.0
MMD3_k127_3228343_6 Tripartite tricarboxylate transporter TctB family - - - 0.00000001892 62.0
MMD3_k127_3228990_0 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 497.0
MMD3_k127_3228990_1 GAF domain - - - 0.0000000000000000002832 89.0
MMD3_k127_3231717_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000003183 93.0
MMD3_k127_3231717_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000005718 66.0
MMD3_k127_3234877_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1558.0
MMD3_k127_3234877_1 lytic transglycosylase activity - - - 0.0000000000000000000000000000004217 134.0
MMD3_k127_3234877_2 - - - - 0.000000000000001653 84.0
MMD3_k127_3241408_0 von Willebrand factor, type A K07114 - - 4.887e-231 723.0
MMD3_k127_3248349_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 361.0
MMD3_k127_3248349_1 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.00000000000000000000000000000000000000000000001883 175.0
MMD3_k127_3248349_2 PFAM ABC transporter related K06020 - 3.6.3.25 0.0000000000000005603 78.0
MMD3_k127_3248349_3 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000003255 77.0
MMD3_k127_32512_0 Iron-containing alcohol dehydrogenase K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 433.0
MMD3_k127_32512_1 hydrolase, TatD family' K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000001622 242.0
MMD3_k127_32512_2 DinB family - - - 0.0000001656 58.0
MMD3_k127_3253422_0 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 512.0
MMD3_k127_3253422_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 466.0
MMD3_k127_3253422_2 hmm pf00545 - GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000003059 190.0
MMD3_k127_3253422_3 Barstar (barnase inhibitor) K03623 - - 0.000000000000000003667 87.0
MMD3_k127_3253422_4 PFAM NUDIX hydrolase - - - 0.000000000000000008923 83.0
MMD3_k127_3267699_0 choline dehydrogenase activity K03333 - 1.1.3.6 1.537e-307 964.0
MMD3_k127_3267699_1 D-arabinono-1,4-lactone oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 408.0
MMD3_k127_3270454_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 406.0
MMD3_k127_3270454_1 Domain of unknown function (DUF1846) - - - 0.000000000000000000891 87.0
MMD3_k127_3273410_0 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003773 286.0
MMD3_k127_3273410_1 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000008047 164.0
MMD3_k127_3273410_2 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.0000000000000000000000003325 110.0
MMD3_k127_328201_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 488.0
MMD3_k127_328201_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 315.0
MMD3_k127_328201_2 Peptidoglycan-binding LysM - - - 0.0000000000000373 82.0
MMD3_k127_328201_3 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 0.0000000000001542 72.0
MMD3_k127_3286323_0 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 447.0
MMD3_k127_3286323_1 Formiminotransferase-cyclodeaminase - - - 0.0000000000000000000000000000000000227 145.0
MMD3_k127_3286323_2 glycerophosphodiester transmembrane transport K02026 - - 0.000000000000000000000007657 102.0
MMD3_k127_3286323_3 protein conserved in bacteria K07793 - - 0.00000000000000000000002479 111.0
MMD3_k127_3291751_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1336.0
MMD3_k127_3291751_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 4.019e-221 694.0
MMD3_k127_3291751_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 383.0
MMD3_k127_3291751_3 PFAM ApbE family K09740 - - 0.0000000000000000000000000000000000000000000000000000000000000000008455 236.0
MMD3_k127_3291751_4 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000001245 199.0
MMD3_k127_3291751_5 diguanylate cyclase activity K02000,K04767,K05847,K07168,K09137 - 3.6.3.32 0.000000000000000000000000000000000000000004835 162.0
MMD3_k127_3291751_6 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000003655 146.0
MMD3_k127_3292743_0 hydrogenase large subunit K05922,K06281 - 1.12.5.1,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 505.0
MMD3_k127_3292743_1 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000006372 256.0
MMD3_k127_3292743_2 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000000000000000001183 111.0
MMD3_k127_3292743_3 4Fe-4S binding domain - - - 0.0000000000000000000162 95.0
MMD3_k127_3297215_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 449.0
MMD3_k127_3297215_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 418.0
MMD3_k127_3297215_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000005289 143.0
MMD3_k127_3297215_3 COGs COG0589 Universal stress protein UspA and related nucleotide-binding protein - - - 0.0000000000001837 73.0
MMD3_k127_3299582_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 513.0
MMD3_k127_3299582_1 RNB K01147,K12573 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004083 439.0
MMD3_k127_3299582_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 405.0
MMD3_k127_3299582_3 Adenosine specific kinase K09129 - - 0.0000000001102 61.0
MMD3_k127_3301787_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 570.0
MMD3_k127_3301787_1 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 336.0
MMD3_k127_3301787_2 POTRA domain, FtsQ-type K03589 - - 0.0000000000000000000000000000000000000000000000001296 187.0
MMD3_k127_3306914_0 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 381.0
MMD3_k127_3306914_1 Aldo/keto reductase family K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 340.0
MMD3_k127_3306914_2 Glyoxalase bleomycin resistance protein dioxygenase superfamily protein 24 - - - 0.0000000000000000000000000000000000000002289 156.0
MMD3_k127_3306914_3 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000001225 94.0
MMD3_k127_3306914_4 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 0.00000000002503 63.0
MMD3_k127_3313832_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K07713 GO:0000156,GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0023052,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 450.0
MMD3_k127_3313832_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000423 291.0
MMD3_k127_3313832_2 phosphorelay signal transduction system K07713 - - 0.00000000000000000000000000000000003341 140.0
MMD3_k127_3316135_0 TIGRFAM Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 491.0
MMD3_k127_3316135_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03591 - - 0.0000008332 60.0
MMD3_k127_3317816_0 ABC transporter K09812 GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0032506,GO:0042173,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:1902531 - 0.00000000000000000000000000000000000000000000000000000000000000000000001784 248.0
MMD3_k127_3317816_1 Peptidase family M23 K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000000001781 252.0
MMD3_k127_3317816_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000002599 216.0
MMD3_k127_3318389_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 420.0
MMD3_k127_3318389_1 PFAM DivIVA family protein K04074 - - 0.0000000000000000000000009235 109.0
MMD3_k127_3318389_2 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000005335 99.0
MMD3_k127_3318389_3 Belongs to the UPF0235 family K09131 - - 0.0000000000000001079 83.0
MMD3_k127_3318389_4 - - - - 0.0000000000005864 70.0
MMD3_k127_3318389_6 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.000002486 59.0
MMD3_k127_3319616_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.217e-233 737.0
MMD3_k127_3319616_1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 486.0
MMD3_k127_3319616_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000005278 112.0
MMD3_k127_3319616_3 Mo-molybdopterin cofactor metabolic process K03154 - - 0.000001289 53.0
MMD3_k127_3319616_4 Molybdopterin converting factor, small subunit K03636 - - 0.000003529 51.0
MMD3_k127_3320269_0 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 592.0
MMD3_k127_3320269_1 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 540.0
MMD3_k127_3320269_2 Cytochrome C biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007298 252.0
MMD3_k127_3320269_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.00000000000000000000000000000001254 129.0
MMD3_k127_3320269_4 PFAM Thioredoxin K03671 - - 0.00000000000000000000000007076 113.0
MMD3_k127_3320269_5 regulatory protein, arsR K03892 - - 0.0000000000000000000000003258 108.0
MMD3_k127_3320269_6 Thioredoxin domain - - - 0.000000000000000000000002068 109.0
MMD3_k127_3320269_7 Thioredoxin domain - - - 0.000000000002093 68.0
MMD3_k127_3322038_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 487.0
MMD3_k127_3322038_1 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 359.0
MMD3_k127_3322038_2 Predicted nucleotide-binding protein containing TIR-like domain - - - 0.0000000000000000000000000002256 126.0
MMD3_k127_3325688_0 ABC transporter permease K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 313.0
MMD3_k127_3325688_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009424 294.0
MMD3_k127_3332008_0 C4-dicarboxylate ABC transporter permease - - - 0.000000000000000000000000000000000000000000000000000000000000007403 224.0
MMD3_k127_3332008_1 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.000000000000000000000000000000000000000002519 168.0
MMD3_k127_3332008_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000005748 78.0
MMD3_k127_3332008_3 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000008507 51.0
MMD3_k127_3333317_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 473.0
MMD3_k127_3333317_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 417.0
MMD3_k127_3333317_2 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000003203 111.0
MMD3_k127_3343172_0 DegT/DnrJ/EryC1/StrS aminotransferase family K19715 - 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 378.0
MMD3_k127_3343172_1 PFAM Iron-containing alcohol dehydrogenase K00001,K19954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 375.0
MMD3_k127_3343172_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000278 245.0
MMD3_k127_3343172_3 L-glutamate biosynthetic process - - - 0.00000000000000000000000001315 111.0
MMD3_k127_3343172_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000002368 98.0
MMD3_k127_3343172_5 PilZ domain K07001,K07003,K10914 - - 0.000002561 60.0
MMD3_k127_3344580_0 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 396.0
MMD3_k127_3344580_1 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000908 379.0
MMD3_k127_3344580_2 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 379.0
MMD3_k127_3348361_0 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000003154 226.0
MMD3_k127_3350972_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 607.0
MMD3_k127_3350972_1 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 379.0
MMD3_k127_3350972_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000003844 55.0
MMD3_k127_3357573_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 428.0
MMD3_k127_3357573_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001396 269.0
MMD3_k127_3357573_2 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000007623 193.0
MMD3_k127_3357573_3 Phospholipid methyltransferase - - - 0.00000000000000000007646 100.0
MMD3_k127_3357573_4 silverDB - - - 0.000003526 60.0
MMD3_k127_3363382_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 574.0
MMD3_k127_3363382_1 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 340.0
MMD3_k127_3366489_0 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007311 283.0
MMD3_k127_3366489_1 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000257 195.0
MMD3_k127_3368547_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 393.0
MMD3_k127_3368547_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002519 259.0
MMD3_k127_3368547_3 Tripartite tricarboxylate transporter TctB family - - - 0.0009685 48.0
MMD3_k127_3369052_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 419.0
MMD3_k127_3369052_1 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 351.0
MMD3_k127_3369052_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000001913 219.0
MMD3_k127_3369052_3 PFAM Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000006176 188.0
MMD3_k127_3369052_4 Single-strand binding protein family K03111 - - 0.00000000000000000000000000000000000000000000005425 173.0
MMD3_k127_3369167_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 364.0
MMD3_k127_3369167_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000001035 129.0
MMD3_k127_3369900_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 563.0
MMD3_k127_3369900_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 414.0
MMD3_k127_3369900_2 Cell cycle protein K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 377.0
MMD3_k127_3369900_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001227 258.0
MMD3_k127_3369900_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000001829 221.0
MMD3_k127_3369900_5 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.000000000000000000000000000000000112 141.0
MMD3_k127_3369900_6 - - - - 0.0000000000000000000000000478 112.0
MMD3_k127_3369900_7 rod shape-determining protein MreD K03571 - - 0.0009972 48.0
MMD3_k127_3371730_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006426 382.0
MMD3_k127_3371730_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000005553 209.0
MMD3_k127_3371730_2 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000006598 175.0
MMD3_k127_3371730_3 - K07018 - - 0.000001989 50.0
MMD3_k127_3373477_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003628 275.0
MMD3_k127_3373477_1 EamA-like transporter family - GO:0003333,GO:0003674,GO:0005215,GO:0005302,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015179,GO:0015192,GO:0015196,GO:0015238,GO:0015318,GO:0015711,GO:0015801,GO:0015807,GO:0015823,GO:0015827,GO:0015828,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000009309 228.0
MMD3_k127_3373477_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000002447 207.0
MMD3_k127_3373717_0 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 312.0
MMD3_k127_3373717_1 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 296.0
MMD3_k127_3373717_2 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000004174 235.0
MMD3_k127_3373717_3 Tfp pilus assembly protein FimV - - - 0.000000002186 63.0
MMD3_k127_3376570_0 Histidine kinase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 379.0
MMD3_k127_3376570_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009463 331.0
MMD3_k127_3376570_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000006312 57.0
MMD3_k127_3380146_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 338.0
MMD3_k127_3380146_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000008633 263.0
MMD3_k127_3380146_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000004308 258.0
MMD3_k127_3389897_0 Aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 298.0
MMD3_k127_3389897_1 Branched-chain amino acid transport system, permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001236 263.0
MMD3_k127_3389897_2 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000004824 238.0
MMD3_k127_3389897_3 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000008484 214.0
MMD3_k127_3389897_4 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997,K11956 - - 0.0000000000000000000000000000000000000000000005166 177.0
MMD3_k127_339551_0 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 293.0
MMD3_k127_339551_1 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000006069 233.0
MMD3_k127_339551_2 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000003292 229.0
MMD3_k127_339551_3 branched-chain amino acid transmembrane transporter activity K01996 - - 0.000000000000000000000000000000000000000000000000000000000001542 213.0
MMD3_k127_339551_4 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000002411 214.0
MMD3_k127_339551_5 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000000000000000000000000000000009656 211.0
MMD3_k127_3402966_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 466.0
MMD3_k127_3402966_1 sarcosine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 369.0
MMD3_k127_3404007_0 sister chromatid segregation - - - 0.0000000000000000000000000000000000000000002013 165.0
MMD3_k127_3404007_1 - - - - 0.0000000000000000000000006148 112.0
MMD3_k127_3405378_0 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 481.0
MMD3_k127_3405378_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 383.0
MMD3_k127_3405378_2 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 385.0
MMD3_k127_3405378_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008121 289.0
MMD3_k127_3405378_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.0000000000000000000000000000000000000000000003448 169.0
MMD3_k127_3405378_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000001354 119.0
MMD3_k127_3405378_6 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.00000445 56.0
MMD3_k127_3414607_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000934 394.0
MMD3_k127_3414607_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 311.0
MMD3_k127_3414607_2 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001663 254.0
MMD3_k127_3414607_3 PFAM ABC transporter K01995 - - 0.0000000000001162 72.0
MMD3_k127_3431611_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002061 247.0
MMD3_k127_3431611_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000001493 120.0
MMD3_k127_3431611_2 - - - - 0.0000000000000000000000001035 117.0
MMD3_k127_3431611_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000001378 89.0
MMD3_k127_3433581_0 L-malate dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000004816 203.0
MMD3_k127_3438579_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 6.311e-280 877.0
MMD3_k127_3438579_1 Aminotransferase K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003093 250.0
MMD3_k127_3438579_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000001304 139.0
MMD3_k127_3439617_0 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000000004388 162.0
MMD3_k127_3439617_1 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000001092 159.0
MMD3_k127_3439617_2 Nitroreductase family - - - 0.0000000000000000000000000000000000002777 147.0
MMD3_k127_3439617_3 major facilitator superfamily MFS_1 - - - 0.00000000000000001038 96.0
MMD3_k127_3442414_0 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K16846,K16850 - 4.2.1.7,4.4.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 452.0
MMD3_k127_3442414_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 343.0
MMD3_k127_3442414_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 336.0
MMD3_k127_3442414_3 Mandelate racemase muconate lactonizing enzyme K01683 - 4.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009306 328.0
MMD3_k127_3442414_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002362 259.0
MMD3_k127_3442414_5 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002042 254.0
MMD3_k127_3442414_6 PFAM ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005691 254.0
MMD3_k127_3442414_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002795 260.0
MMD3_k127_3442414_8 PFAM SAF domain K16845,K16849 - 4.2.1.7,4.4.1.24 0.000000000000000496 78.0
MMD3_k127_3442543_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 488.0
MMD3_k127_3442543_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 364.0
MMD3_k127_3442543_2 PFAM regulatory protein, MarR - - - 0.00000000000000006648 85.0
MMD3_k127_3442543_3 Glutathione peroxidase - - - 0.00000000000227 70.0
MMD3_k127_3442543_4 Thioredoxin-like K02199 - - 0.000000005918 61.0
MMD3_k127_3442543_5 Tetratricopeptide repeat - - - 0.000001108 58.0
MMD3_k127_3444378_0 TIGRFAM oxaloacetate decarboxylase alpha subunit K01960 - 6.4.1.1 6.676e-194 614.0
MMD3_k127_3444378_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000003208 193.0
MMD3_k127_3444378_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000002829 125.0
MMD3_k127_3452110_0 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.0000000000000000000000000000000000000000000000005013 184.0
MMD3_k127_3452110_1 TIGRFAM competence damage-inducible protein CinA K03742,K03743 - 3.5.1.42 0.0000000000000000000000003485 112.0
MMD3_k127_3452110_2 Protein of unknown function (DUF3568) - - - 0.00000000009101 70.0
MMD3_k127_3463727_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000002971 76.0
MMD3_k127_3472631_0 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000001817 166.0
MMD3_k127_3472631_1 Protein of unknown function (DUF456) - - - 0.00000000000000000000000000000001588 134.0
MMD3_k127_3472631_2 Cupin domain - - - 0.0000000000000000000000006131 107.0
MMD3_k127_3472631_3 Uracil-DNA glycosylase - - - 0.00000000000000004241 83.0
MMD3_k127_3472631_4 cheY-homologous receiver domain - - - 0.0000000000001722 70.0
MMD3_k127_3474336_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 424.0
MMD3_k127_3474336_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000005552 143.0
MMD3_k127_3474336_2 Flavin reductase like domain - - - 0.0000000000000000000000000000000005435 137.0
MMD3_k127_3474336_3 PFAM NADPH-dependent FMN reductase - - - 0.0004688 46.0
MMD3_k127_3478183_0 synthase K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 334.0
MMD3_k127_3478183_1 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000006042 167.0
MMD3_k127_3478183_2 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000003101 146.0
MMD3_k127_3485198_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 375.0
MMD3_k127_3485198_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 353.0
MMD3_k127_3485198_2 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 302.0
MMD3_k127_3493078_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 585.0
MMD3_k127_3493078_1 Universal stress protein family - - - 0.000000000000000000000000000005988 125.0
MMD3_k127_3520689_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 473.0
MMD3_k127_3520689_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 467.0
MMD3_k127_3520689_2 Prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000001388 232.0
MMD3_k127_3520689_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000005307 51.0
MMD3_k127_3526831_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001092 244.0
MMD3_k127_3526831_1 TraB family K00657,K09973 - 2.3.1.57 0.0000000000000000000000000000000000000000000000000000000000005334 222.0
MMD3_k127_3526831_2 - - - - 0.000000000000000000000000000000000000000000000000000000000007572 224.0
MMD3_k127_3526831_3 PFAM Radical SAM domain protein - - - 0.00000001917 61.0
MMD3_k127_3527862_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 339.0
MMD3_k127_3527862_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005118 256.0
MMD3_k127_3527862_2 YbaB/EbfC DNA-binding family K09747 - - 0.000000000000000000000000000000000001086 141.0
MMD3_k127_3527862_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000001228 112.0
MMD3_k127_3537083_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 369.0
MMD3_k127_3537083_1 ABC transporter substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000002847 222.0
MMD3_k127_3537083_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000273 164.0
MMD3_k127_357374_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.318e-218 693.0
MMD3_k127_3589998_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000005822 197.0
MMD3_k127_359944_0 Tripartite tricarboxylate transporter TctA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 568.0
MMD3_k127_359944_1 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000008217 232.0
MMD3_k127_3605075_0 RecF/RecN/SMC N terminal domain K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 448.0
MMD3_k127_3605075_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 372.0
MMD3_k127_3605075_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 314.0
MMD3_k127_3605075_3 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000002497 203.0
MMD3_k127_3605075_4 PFAM peptidase - - - 0.0000000000000000000000000000000000000008464 160.0
MMD3_k127_3605075_5 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.00000004045 55.0
MMD3_k127_3606678_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 586.0
MMD3_k127_3606678_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007877 277.0
MMD3_k127_3606678_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006659 252.0
MMD3_k127_3606678_3 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000008712 161.0
MMD3_k127_3606678_4 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000006123 94.0
MMD3_k127_3622549_0 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 373.0
MMD3_k127_3622549_1 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004525 281.0
MMD3_k127_3622549_2 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 277.0
MMD3_k127_3622549_3 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009635 282.0
MMD3_k127_3622549_4 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000003814 165.0
MMD3_k127_3638626_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 536.0
MMD3_k127_3638626_1 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 364.0
MMD3_k127_3638626_10 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000001305 70.0
MMD3_k127_3638626_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002432 276.0
MMD3_k127_3638626_3 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000002884 230.0
MMD3_k127_3638626_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000001157 191.0
MMD3_k127_3638626_5 transcriptional regulator, AsnC family - - - 0.0000000000000000000000000000000000000000000002622 172.0
MMD3_k127_3638626_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000133 169.0
MMD3_k127_3638626_7 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.00000000000000000000000000000000000000000001325 171.0
MMD3_k127_3638626_8 DRTGG domain - - - 0.0000000000000000000000000000000005088 134.0
MMD3_k127_3638626_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000006834 89.0
MMD3_k127_3656024_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.056e-303 942.0
MMD3_k127_3656024_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000002153 81.0
MMD3_k127_371796_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004505 280.0
MMD3_k127_371796_1 EamA-like transporter family K08978 - - 0.00000000000000000000000006032 111.0
MMD3_k127_3735638_0 PFAM AMP-dependent synthetase K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 367.0
MMD3_k127_3735638_1 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003822 264.0
MMD3_k127_3735638_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000003654 171.0
MMD3_k127_3748908_0 - - - - 0.00000000000000000000000000000000000000000000000000000000004242 210.0
MMD3_k127_3748908_1 5'-nucleotidase - - - 0.0000000000000000000000000000000000000000007308 172.0
MMD3_k127_3748908_2 Thioredoxin - - - 0.00000000000000000000000000000000000000568 158.0
MMD3_k127_3802393_0 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 484.0
MMD3_k127_3802393_1 Cache sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000003277 192.0
MMD3_k127_3802393_2 Conserved region in glutamate synthase - - - 0.0000000000000000000000000004659 116.0
MMD3_k127_3802393_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000001356 75.0
MMD3_k127_3806641_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 370.0
MMD3_k127_3806641_1 FMN-dependent dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 345.0
MMD3_k127_3831087_0 DEAD DEAH box K03724 - - 7.565e-203 655.0
MMD3_k127_3831087_1 protein tyrosine phosphatase activity K01104,K19302 - 3.1.3.48,3.6.1.27 0.000000000000000000004196 99.0
MMD3_k127_3831087_2 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000002497 86.0
MMD3_k127_3836790_0 GAD domain K01876 - 6.1.1.12 2.635e-212 672.0
MMD3_k127_3836790_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 351.0
MMD3_k127_3836790_3 Domain of unknown function (DUF362) - - - 0.0000000000000002735 87.0
MMD3_k127_3861692_0 PFAM ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 342.0
MMD3_k127_3861692_1 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 333.0
MMD3_k127_3861692_2 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 323.0
MMD3_k127_3861692_3 PFAM amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000006245 239.0
MMD3_k127_3861692_4 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000211 139.0
MMD3_k127_3863756_0 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 489.0
MMD3_k127_3863756_1 PFAM peptidase M16 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 411.0
MMD3_k127_3863756_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000001694 56.0
MMD3_k127_3863756_3 Sporulation related domain - - - 0.0002039 47.0
MMD3_k127_3868236_0 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006998 537.0
MMD3_k127_3868236_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000008499 87.0
MMD3_k127_3871141_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000006448 265.0
MMD3_k127_3871141_1 PFAM CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006201 260.0
MMD3_k127_3871141_2 CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000002256 222.0
MMD3_k127_3878057_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 521.0
MMD3_k127_3878057_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003498 267.0
MMD3_k127_3878057_2 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000004448 170.0
MMD3_k127_3878057_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000009206 75.0
MMD3_k127_3878514_0 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 297.0
MMD3_k127_3878514_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000043 153.0
MMD3_k127_3878514_2 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000005275 104.0
MMD3_k127_3878514_3 Pyridine nucleotide-disulphide oxidoreductase K17870,K18367 - 1.6.3.3,1.8.1.18 0.00000000000000000006699 96.0
MMD3_k127_3885185_0 General secretory system II, protein E domain protein K02652 - - 1.964e-240 754.0
MMD3_k127_3885185_1 Type II secretion system (T2SS), protein F K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 490.0
MMD3_k127_3885185_2 Belongs to the CinA family - - - 0.00000000000000000000000000000000000000000002251 172.0
MMD3_k127_3885185_3 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000002213 151.0
MMD3_k127_3897791_0 Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 431.0
MMD3_k127_3897791_1 Bacterial dnaA protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001505 243.0
MMD3_k127_3897791_2 PFAM Glycosyl transferase family 2 - - - 0.000000000001243 70.0
MMD3_k127_3900271_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 2.614e-235 733.0
MMD3_k127_3900271_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 305.0
MMD3_k127_3900271_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00972 - 2.7.7.23,2.7.7.83 0.000000000000000000000000000000000000001505 154.0
MMD3_k127_3900271_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000719 129.0
MMD3_k127_3907860_0 Insulinase (Peptidase family M16) K07263 - - 2.809e-317 992.0
MMD3_k127_3907860_1 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 347.0
MMD3_k127_3907860_2 Phosphate transport regulator K07220 - - 0.00000000000000000000000000000001836 134.0
MMD3_k127_3907860_3 ATP-independent chaperone mediated protein folding K07803 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0008270,GO:0016151,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050897 - 0.00000000000000002101 88.0
MMD3_k127_3908265_0 PFAM PP-loop domain protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 320.0
MMD3_k127_3908265_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005104 246.0
MMD3_k127_3908265_2 TIGRFAM thiW protein - - - 0.0000000000000000000000000000000000000000000000002221 181.0
MMD3_k127_3908265_3 polynucleotide 5'-hydroxyl-kinase activity K06947 - - 0.000000000000000000000000000967 119.0
MMD3_k127_3908265_4 PFAM helix-turn-helix domain protein - - - 0.0000000000000000006343 87.0
MMD3_k127_3908265_5 cell cycle K05589,K12065,K13052 - - 0.00001125 51.0
MMD3_k127_3908265_6 flavin reductase domain protein FMN-binding - - - 0.00001884 48.0
MMD3_k127_3908790_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 1.659e-240 764.0
MMD3_k127_3908790_1 Conserved region in glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 349.0
MMD3_k127_3908790_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006995 234.0
MMD3_k127_3908790_3 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000005211 206.0
MMD3_k127_3908790_4 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03388 - 1.6.5.3,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000002367 175.0
MMD3_k127_3910839_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002911 274.0
MMD3_k127_3910839_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004506 239.0
MMD3_k127_3910839_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000006233 185.0
MMD3_k127_3916977_0 Acyl-CoA dehydrogenase type 2 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 522.0
MMD3_k127_3916977_1 4Fe-4S binding domain - - - 0.0000000001699 62.0
MMD3_k127_3921219_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 556.0
MMD3_k127_3921219_1 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000856 271.0
MMD3_k127_3921219_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000008046 244.0
MMD3_k127_3921219_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000000000000001953 212.0
MMD3_k127_3921219_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000001269 148.0
MMD3_k127_3921219_5 Predicted SPOUT methyltransferase K00783 - 2.1.1.177 0.0000000000000000000000000000000000007996 145.0
MMD3_k127_3924700_0 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000006646 213.0
MMD3_k127_3924700_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000002483 152.0
MMD3_k127_3924700_2 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000001799 55.0
MMD3_k127_392846_0 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000007204 239.0
MMD3_k127_392846_1 GlcNAc-PI de-N-acetylase K16515 - 4.2.1.83 0.0000000000000000000000001856 106.0
MMD3_k127_392846_2 cellulase activity - - - 0.0000000000001724 81.0
MMD3_k127_3929047_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 503.0
MMD3_k127_3929047_1 EamA-like transporter family - - - 0.0000001342 63.0
MMD3_k127_3929047_2 membrane K07794 - - 0.00007729 48.0
MMD3_k127_3929523_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 561.0
MMD3_k127_3929523_1 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000002925 190.0
MMD3_k127_3931893_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 526.0
MMD3_k127_3931893_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000002782 232.0
MMD3_k127_3931893_2 - - - - 0.0000000000000005807 81.0
MMD3_k127_3932878_0 Bacterial cellulose synthase subunit K20541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 432.0
MMD3_k127_3936832_0 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 2.578e-294 910.0
MMD3_k127_3936832_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.923e-256 802.0
MMD3_k127_3936832_10 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 456.0
MMD3_k127_3936832_11 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 332.0
MMD3_k127_3936832_12 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 335.0
MMD3_k127_3936832_13 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 315.0
MMD3_k127_3936832_14 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 309.0
MMD3_k127_3936832_15 PFAM ParB domain protein nuclease K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001379 278.0
MMD3_k127_3936832_16 Putative RNA methylase family UPF0020 K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008437 276.0
MMD3_k127_3936832_17 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008015 282.0
MMD3_k127_3936832_18 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003531 257.0
MMD3_k127_3936832_19 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000001034 188.0
MMD3_k127_3936832_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.11e-245 764.0
MMD3_k127_3936832_20 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000006735 156.0
MMD3_k127_3936832_21 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000011 144.0
MMD3_k127_3936832_22 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000232 126.0
MMD3_k127_3936832_23 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000001785 121.0
MMD3_k127_3936832_24 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000009753 119.0
MMD3_k127_3936832_25 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000002092 109.0
MMD3_k127_3936832_26 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000002878 94.0
MMD3_k127_3936832_27 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000502 88.0
MMD3_k127_3936832_28 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000003703 63.0
MMD3_k127_3936832_29 Copper amine oxidase N-terminal domain - - - 0.0000003068 63.0
MMD3_k127_3936832_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.278e-244 760.0
MMD3_k127_3936832_4 Bacterial extracellular solute-binding protein K02012 - - 8.173e-204 638.0
MMD3_k127_3936832_5 DNA-templated transcription, termination K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 9.064e-204 640.0
MMD3_k127_3936832_6 DEAD DEAH box helicase K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 611.0
MMD3_k127_3936832_7 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 541.0
MMD3_k127_3936832_8 TOBE domain K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 507.0
MMD3_k127_3936832_9 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 482.0
MMD3_k127_3942535_0 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 340.0
MMD3_k127_3942535_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000002077 249.0
MMD3_k127_3942535_2 exodeoxyribonuclease I activity - - - 0.0000000000000000003659 90.0
MMD3_k127_394500_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 550.0
MMD3_k127_394500_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 412.0
MMD3_k127_394500_2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003725 279.0
MMD3_k127_3945915_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 541.0
MMD3_k127_3945915_1 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 347.0
MMD3_k127_3945915_2 PFAM Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000000000000000000000232 186.0
MMD3_k127_3945915_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000004078 135.0
MMD3_k127_3949269_0 major facilitator superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 390.0
MMD3_k127_3949269_1 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 323.0
MMD3_k127_3949269_2 PFAM secretion protein HlyD family protein K03543 - - 0.00000000000000000000000000000000000000000000000000000003453 213.0
MMD3_k127_3949269_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000006775 197.0
MMD3_k127_3949269_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000797 176.0
MMD3_k127_3949269_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000000000001031 129.0
MMD3_k127_3954912_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 527.0
MMD3_k127_3954912_1 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000003348 236.0
MMD3_k127_3956385_0 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 407.0
MMD3_k127_3956385_1 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 316.0
MMD3_k127_3956385_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 317.0
MMD3_k127_3956385_3 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000001465 255.0
MMD3_k127_3956385_4 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000001487 185.0
MMD3_k127_3956385_5 PFAM short chain dehydrogenase K00046,K00059 - 1.1.1.100,1.1.1.69 0.0000000000000000000006186 96.0
MMD3_k127_3956385_6 PFAM Colicin V production K03558 - - 0.0000000000000003621 87.0
MMD3_k127_3959025_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 1.267e-224 714.0
MMD3_k127_3959025_1 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 317.0
MMD3_k127_3959025_2 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 310.0
MMD3_k127_3959025_3 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000003376 230.0
MMD3_k127_3959025_4 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000006867 197.0
MMD3_k127_3959025_5 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000006342 164.0
MMD3_k127_3959025_6 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000002737 151.0
MMD3_k127_3959025_7 HMGL-like K01649 - 2.3.3.13 0.0000000000000000000000003166 109.0
MMD3_k127_3959194_0 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 1.794e-308 977.0
MMD3_k127_3959194_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 528.0
MMD3_k127_3959194_2 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000001029 200.0
MMD3_k127_3959194_3 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000001178 180.0
MMD3_k127_3959194_4 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.00000000000000000000000000000000000000000000001403 179.0
MMD3_k127_3959194_5 Ferredoxin K00335,K17992 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000005583 141.0
MMD3_k127_3959194_6 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000005456 74.0
MMD3_k127_3959529_0 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1111.0
MMD3_k127_3959529_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 575.0
MMD3_k127_3959857_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 434.0
MMD3_k127_3959857_1 Malate/L-lactate dehydrogenase - - - 0.0000000000000000000000002181 109.0
MMD3_k127_3959857_2 FecR protein - - - 0.00000000000000000001911 104.0
MMD3_k127_3962662_0 Von Willebrand factor type A K02448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 325.0
MMD3_k127_3962662_1 Associated with various cellular activities K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000542 261.0
MMD3_k127_3973734_0 Conserved protein - - - 0.00000000000000000000000000000000000000000000000000000000000009252 222.0
MMD3_k127_3973734_1 Ribosomal protein L11 methyltransferase (PrmA) K15460 - 2.1.1.223 0.000000000000000000000000000000000000000000000000000000000002914 216.0
MMD3_k127_3973734_2 ROK family K00847 - 2.7.1.4 0.00000003307 55.0
MMD3_k127_3978889_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002231 273.0
MMD3_k127_3978889_1 oxidoreductase K19181 - 1.1.1.292 0.0000000000000000000000000000000000000000001284 172.0
MMD3_k127_3980545_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 1.217e-216 682.0
MMD3_k127_3980545_1 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 392.0
MMD3_k127_3980545_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 367.0
MMD3_k127_3980545_4 Alkylmercury lyase - - - 0.00000009362 55.0
MMD3_k127_3983434_0 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 421.0
MMD3_k127_3983434_1 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 295.0
MMD3_k127_3983434_2 Acyl-CoA dehydrogenase, C-terminal domain K00248,K18244 - 1.3.8.1 0.00000000000000006375 80.0
MMD3_k127_3987635_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 4.941e-197 621.0
MMD3_k127_3987635_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 5.411e-197 631.0
MMD3_k127_3987635_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 603.0
MMD3_k127_3987635_3 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000000001447 103.0
MMD3_k127_3988603_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001 240.0
MMD3_k127_3988603_1 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000002725 234.0
MMD3_k127_3988603_2 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000007688 166.0
MMD3_k127_3988603_3 Radical SAM superfamily - - - 0.0000184 48.0
MMD3_k127_3990581_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 507.0
MMD3_k127_3990581_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000008994 240.0
MMD3_k127_3990581_2 peptidase M42 family protein - - - 0.0000000000000000000000007886 105.0
MMD3_k127_3993585_0 Glycosyl hydrolase family 57 - - - 7.899e-198 639.0
MMD3_k127_3993585_1 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 578.0
MMD3_k127_3993585_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 354.0
MMD3_k127_3997626_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00972 - 2.7.7.23,2.7.7.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 456.0
MMD3_k127_3997626_1 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 361.0
MMD3_k127_3997626_2 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 337.0
MMD3_k127_3997626_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00972 - 2.7.7.23,2.7.7.83 0.00000000000001271 74.0
MMD3_k127_3997626_4 Bacterial extracellular solute-binding protein K02027 - - 0.00000002486 56.0
MMD3_k127_4003697_0 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 441.0
MMD3_k127_4003697_1 Phosphoglycerate mutase family K22305 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000002032 212.0
MMD3_k127_4003697_2 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000154 183.0
MMD3_k127_4003697_3 Divergent 4Fe-4S mono-cluster K05337 - - 0.00000000000000000000001303 102.0
MMD3_k127_4003697_4 ribonuclease BN K07058 - - 0.00000000000000000000007139 109.0
MMD3_k127_4003697_5 COGs COG0589 Universal stress protein UspA and related nucleotide-binding protein - - - 0.00000000000000000006532 94.0
MMD3_k127_4003697_6 Major Facilitator Superfamily - - - 0.000000000001469 74.0
MMD3_k127_4013053_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 515.0
MMD3_k127_4013507_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.669e-245 769.0
MMD3_k127_4013507_1 PFAM 2-nitropropane dioxygenase NPD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 460.0
MMD3_k127_4013507_2 Aromatic ring hydroxylase K14534 - 4.2.1.120,5.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 388.0
MMD3_k127_4013507_3 PFAM regulatory protein MerR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009937 262.0
MMD3_k127_4013575_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000007363 206.0
MMD3_k127_4013575_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000001752 186.0
MMD3_k127_4013575_2 PFAM Forkhead-associated protein - - - 0.00000000000000000000000002547 117.0
MMD3_k127_401486_0 response regulator K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 530.0
MMD3_k127_401486_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 316.0
MMD3_k127_401486_2 histidine kinase, HAMP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007983 285.0
MMD3_k127_401486_3 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000001337 171.0
MMD3_k127_401486_4 Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 - - 0.0000000000000000000001585 109.0
MMD3_k127_401486_5 Type II transport protein GspH K08084 - - 0.000002466 57.0
MMD3_k127_401486_6 pilus assembly protein PilW - - - 0.00004651 54.0
MMD3_k127_4024329_0 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 411.0
MMD3_k127_4024329_1 Belongs to the ABC transporter superfamily K02032,K10823 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 395.0
MMD3_k127_4024329_2 PFAM binding-protein-dependent transport systems inner membrane component K02033,K12369,K13890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 312.0
MMD3_k127_4024329_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000007909 254.0
MMD3_k127_4024329_4 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000008011 178.0
MMD3_k127_4028349_0 Amidase - - - 6.577e-208 656.0
MMD3_k127_4028349_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 357.0
MMD3_k127_4028349_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000051 255.0
MMD3_k127_4028349_3 Alpha beta hydrolase K00433,K01055 - 1.11.1.10,3.1.1.24 0.000009166 53.0
MMD3_k127_4033384_0 dihydroorotate dehydrogenase K17723 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000003038 238.0
MMD3_k127_4033384_1 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000001981 150.0
MMD3_k127_4034277_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 427.0
MMD3_k127_4034277_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 413.0
MMD3_k127_4034277_10 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000003301 73.0
MMD3_k127_4034277_11 - - - - 0.000000001333 64.0
MMD3_k127_4034277_12 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.00000005565 62.0
MMD3_k127_4034277_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 358.0
MMD3_k127_4034277_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000008517 166.0
MMD3_k127_4034277_4 MazG nucleotide pyrophosphohydrolase domain - - - 0.000000000000000000000000000000555 124.0
MMD3_k127_4034277_5 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000004227 114.0
MMD3_k127_4034277_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000007797 108.0
MMD3_k127_4034277_7 protein conserved in bacteria - - - 0.000000000000000000005594 104.0
MMD3_k127_4034277_8 Ribosomal L32p protein family K02911 - - 0.00000000000000000005114 90.0
MMD3_k127_4034277_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000006315 94.0
MMD3_k127_4035025_0 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 355.0
MMD3_k127_4035025_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001026 278.0
MMD3_k127_4035025_2 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000003747 77.0
MMD3_k127_4040815_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.059e-240 757.0
MMD3_k127_4040815_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000002566 181.0
MMD3_k127_40462_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 454.0
MMD3_k127_40462_1 Phage integrase, N-terminal SAM-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 312.0
MMD3_k127_40462_2 - - - - 0.000000000000000000000000000001561 123.0
MMD3_k127_40462_3 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000002753 61.0
MMD3_k127_4046555_0 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 326.0
MMD3_k127_4046555_1 Cytochrome C assembly protein - - - 0.0006584 46.0
MMD3_k127_4054758_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 7.561e-195 621.0
MMD3_k127_4054758_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 501.0
MMD3_k127_4054758_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 324.0
MMD3_k127_4054758_3 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000004435 124.0
MMD3_k127_4056418_0 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 297.0
MMD3_k127_4056418_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000003059 193.0
MMD3_k127_4056418_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000001395 185.0
MMD3_k127_4056418_3 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.00000000000000000000000000000000003211 141.0
MMD3_k127_4056418_4 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000012 111.0
MMD3_k127_4056418_5 RNA-binding - - - 0.0000000000000000000001682 101.0
MMD3_k127_4056418_6 - - - - 0.000000006154 58.0
MMD3_k127_4056418_7 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000002968 53.0
MMD3_k127_4056418_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000009842 59.0
MMD3_k127_4056814_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 537.0
MMD3_k127_4056814_1 - - - - 0.00000000000000000000000000000000000004411 147.0
MMD3_k127_4056814_2 Protein of unknown function (DUF401) K09133 - - 0.00000000009656 67.0
MMD3_k127_4058126_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.294e-201 632.0
MMD3_k127_4058126_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 441.0
MMD3_k127_4058126_2 Capsule assembly protein Wzi - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 299.0
MMD3_k127_4058126_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000007048 134.0
MMD3_k127_4066850_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 506.0
MMD3_k127_4066850_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 466.0
MMD3_k127_4066850_2 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 444.0
MMD3_k127_4066850_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 413.0
MMD3_k127_4066850_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 411.0
MMD3_k127_4066850_5 H( )-stimulated, divalent metal cation uptake system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 350.0
MMD3_k127_4066850_6 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 329.0
MMD3_k127_4066850_7 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000004288 190.0
MMD3_k127_4066850_8 - - - - 0.000000000000000000000000000000000000002847 147.0
MMD3_k127_4066850_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000001291 113.0
MMD3_k127_4068586_0 PFAM Acetyl-CoA hydrolase transferase K18122 - - 7.231e-295 917.0
MMD3_k127_4068586_1 CoA binding domain K01905 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 400.0
MMD3_k127_4068586_2 Cupin 2, conserved barrel domain protein - - - 0.00000000001184 66.0
MMD3_k127_4073014_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 293.0
MMD3_k127_4073014_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001434 271.0
MMD3_k127_4073014_2 PFAM Smr protein MutS2 - - - 0.00000000000000000000000000000000000000000000000001455 190.0
MMD3_k127_4073014_3 peptidase inhibitor activity - - - 0.000000000000000000000000000000000000000000000007788 180.0
MMD3_k127_4073014_4 PFAM Patatin K07001 - - 0.00000000000000000000000000000000004891 138.0
MMD3_k127_40732_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 536.0
MMD3_k127_40732_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 462.0
MMD3_k127_40732_2 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 400.0
MMD3_k127_40732_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004752 294.0
MMD3_k127_40732_4 Histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000001285 220.0
MMD3_k127_40732_5 Major Facilitator Superfamily - - - 0.00000000000000003288 85.0
MMD3_k127_4076226_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.462e-214 692.0
MMD3_k127_4076226_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 376.0
MMD3_k127_4076226_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 334.0
MMD3_k127_4076226_3 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001791 268.0
MMD3_k127_4076226_4 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000125 269.0
MMD3_k127_4076226_5 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000004087 131.0
MMD3_k127_4077947_0 DNA polymerase A domain K02335 - 2.7.7.7 3.649e-320 1003.0
MMD3_k127_4077947_1 AsnC-type helix-turn-helix domain - - - 0.000000000000000000000000000000000000002591 149.0
MMD3_k127_4077947_2 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000557 56.0
MMD3_k127_4079859_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 426.0
MMD3_k127_4079859_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000001209 113.0
MMD3_k127_4079859_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000004335 82.0
MMD3_k127_4079859_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000184 60.0
MMD3_k127_4093822_0 mannitol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 454.0
MMD3_k127_4093822_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 316.0
MMD3_k127_4093822_2 carbohydrate transport K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000002008 236.0
MMD3_k127_4093822_3 Trap-type c4-dicarboxylate transport system, small permease component K11689,K21394 - - 0.0000000000009179 76.0
MMD3_k127_4093822_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K19647 - 1.1.1.291 0.00007494 46.0
MMD3_k127_4097933_0 PFAM 2-nitropropane dioxygenase NPD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 516.0
MMD3_k127_4097933_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000002817 86.0
MMD3_k127_4103616_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 452.0
MMD3_k127_4103616_1 fibronectin type III domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002289 249.0
MMD3_k127_4103616_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000004963 223.0
MMD3_k127_4118417_0 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 546.0
MMD3_k127_4118417_1 Creatinase/Prolidase N-terminal domain K01271,K15783 - 3.4.13.9,3.5.4.44 0.000000000000000000000000000000000000000000000000000000006783 214.0
MMD3_k127_4118417_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000001192 122.0
MMD3_k127_4118417_3 Cupin 2, conserved barrel domain protein - - - 0.00000776 55.0
MMD3_k127_4132069_0 acetyl coenzyme A synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 314.0
MMD3_k127_4132069_2 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000003015 91.0
MMD3_k127_4132069_3 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000003342 76.0
MMD3_k127_4146444_0 lactate racemase activity K22373 - 5.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 357.0
MMD3_k127_4146444_1 ATPase BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 349.0
MMD3_k127_4157112_0 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 333.0
MMD3_k127_4157112_1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000753 257.0
MMD3_k127_4177370_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649,K02594 - 2.3.3.13,2.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 436.0
MMD3_k127_4177370_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 390.0
MMD3_k127_4177370_2 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 301.0
MMD3_k127_41847_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 421.0
MMD3_k127_41847_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 397.0
MMD3_k127_4190198_0 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 365.0
MMD3_k127_4190198_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 357.0
MMD3_k127_4190198_2 Peptidase family M20/M25/M40 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 333.0
MMD3_k127_4190198_3 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000005678 143.0
MMD3_k127_4190198_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000009178 84.0
MMD3_k127_4190198_5 PFAM MltA domain protein K08304 - - 0.000000000000002895 76.0
MMD3_k127_4190198_6 2 iron, 2 sulfur cluster binding K03518,K07302 - 1.2.5.3,1.3.99.16 0.00000001857 63.0
MMD3_k127_4194071_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 2.308e-294 924.0
MMD3_k127_4194071_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.731e-280 872.0
MMD3_k127_4194071_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 602.0
MMD3_k127_4194071_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 522.0
MMD3_k127_4194071_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 368.0
MMD3_k127_4194071_5 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000001073 147.0
MMD3_k127_4194071_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000002062 118.0
MMD3_k127_4194071_7 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000001056 106.0
MMD3_k127_4200828_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 4.376e-265 835.0
MMD3_k127_4200828_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006257 240.0
MMD3_k127_4200828_2 Nitrate reductase delta subunit - - - 0.00000000000000000000000005902 115.0
MMD3_k127_4200828_3 PFAM Polysulphide reductase, NrfD K16294 - - 0.00000000000000000000000008728 112.0
MMD3_k127_4200828_4 Rhodanese Homology Domain - - - 0.0000000000001643 72.0
MMD3_k127_4206167_0 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 571.0
MMD3_k127_4206167_1 Belongs to the Nudix hydrolase family. NudC subfamily K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 353.0
MMD3_k127_4206167_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000222 265.0
MMD3_k127_4206167_3 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000000000000000000000003709 197.0
MMD3_k127_4206167_4 Aminoacyl-tRNA editing domain - - - 0.000000000000000000000000000005384 120.0
MMD3_k127_4206167_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000629 93.0
MMD3_k127_4211385_0 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 363.0
MMD3_k127_4211385_1 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 351.0
MMD3_k127_4211385_2 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 331.0
MMD3_k127_4211385_3 Aminotransferase class-III K00833,K03851,K12256,K15372 - 2.6.1.113,2.6.1.55,2.6.1.62,2.6.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 317.0
MMD3_k127_4220664_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 601.0
MMD3_k127_4220664_1 TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 586.0
MMD3_k127_4220664_2 transport system periplasmic component K07080 - - 0.00000000000000000000000000000216 123.0
MMD3_k127_4220664_3 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000001181 53.0
MMD3_k127_42244_0 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008305 287.0
MMD3_k127_42244_1 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000001313 208.0
MMD3_k127_42244_2 - - - - 0.00000000000000000000001618 115.0
MMD3_k127_4226872_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 611.0
MMD3_k127_4226872_1 ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000412 181.0
MMD3_k127_4226872_2 Tripartite tricarboxylate transporter TctB family - - - 0.0000132 49.0
MMD3_k127_4229470_0 Bacterial transferase hexapeptide K02617 - - 0.000000000000000000000000000000000000000000000000000144 193.0
MMD3_k127_4229470_1 Reverse transcriptase-like K03469 - 3.1.26.4 0.00000000000000000000000000000000004762 142.0
MMD3_k127_4229470_2 C4-type zinc ribbon domain K07164 - - 0.000000000000000462 79.0
MMD3_k127_4229470_4 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000004857 57.0
MMD3_k127_4229990_0 Ornithine cyclodeaminase/mu-crystallin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 376.0
MMD3_k127_4229990_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 309.0
MMD3_k127_4229990_2 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000009464 131.0
MMD3_k127_4234479_0 Bacterial regulatory protein, Fis family K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 499.0
MMD3_k127_4234479_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000699 132.0
MMD3_k127_4234479_2 GAF domain - - - 0.00000000000000000000003473 100.0
MMD3_k127_4234479_3 PhoQ Sensor - - - 0.000000000000004038 89.0
MMD3_k127_4237801_0 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 371.0
MMD3_k127_4237801_1 ABC transporter, ATP-binding protein K02074,K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003301 259.0
MMD3_k127_4237801_2 PFAM periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003738 263.0
MMD3_k127_4237801_3 ABC 3 transport family K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002741 251.0
MMD3_k127_425276_0 mannitol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 472.0
MMD3_k127_425276_1 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000001023 232.0
MMD3_k127_425276_2 Tripartite ATP-independent periplasmic transporter, DctQ - - - 0.00002281 51.0
MMD3_k127_4254992_0 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 371.0
MMD3_k127_4254992_1 Acyl-CoA dehydrogenase, N-terminal domain K11731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 346.0
MMD3_k127_4254992_2 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001947 245.0
MMD3_k127_4254992_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000338 174.0
MMD3_k127_4254992_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000238 159.0
MMD3_k127_4262380_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 346.0
MMD3_k127_4262380_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 322.0
MMD3_k127_4262380_2 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000156 156.0
MMD3_k127_4262380_3 - - - - 0.000001901 58.0
MMD3_k127_4262380_4 (GGDEF) domain - - - 0.0002156 53.0
MMD3_k127_4274529_0 Glycosyl transferase family 21 K00752,K11936 - 2.4.1.212 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 338.0
MMD3_k127_4274529_1 glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000004953 250.0
MMD3_k127_4274968_0 CoA-ligase K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 328.0
MMD3_k127_4274968_1 PFAM HhH-GPD superfamily base excision DNA repair protein K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001804 261.0
MMD3_k127_4274968_2 5'-nucleotidase, C-terminal domain K01081,K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000018 137.0
MMD3_k127_4274968_3 biosynthesis protein E K06139 - - 0.0000000000009693 81.0
MMD3_k127_4275341_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.919e-230 742.0
MMD3_k127_4275341_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 486.0
MMD3_k127_4275341_2 Protein of unknown function (DUF1016) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 439.0
MMD3_k127_4275341_3 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000002131 231.0
MMD3_k127_4275341_4 - - - - 0.000000000000000000000000000000000000000000000000000005437 196.0
MMD3_k127_4275341_5 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000004564 165.0
MMD3_k127_4278836_0 Short chain fatty acid transporter K02106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002623 282.0
MMD3_k127_4278836_1 acyl-CoA transferases carnitine dehydratase - - - 0.0000000000000000000000000000000000000002571 153.0
MMD3_k127_4284273_0 Methyltransferase type 11 K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000735 167.0
MMD3_k127_4284273_1 COGs COG0589 Universal stress protein UspA and related nucleotide-binding protein - - - 0.0000000000000000000000003732 112.0
MMD3_k127_4284273_2 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.0000007625 51.0
MMD3_k127_4284355_0 peptidase dimerisation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 333.0
MMD3_k127_4284355_1 - - - - 0.00000000000000000000000000292 117.0
MMD3_k127_4284355_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000006185 97.0
MMD3_k127_4293215_0 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 367.0
MMD3_k127_4293215_1 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000005118 167.0
MMD3_k127_4293215_2 Protein of unknown function (DUF1638) - - - 0.00000000006444 65.0
MMD3_k127_4308153_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 1.643e-212 669.0
MMD3_k127_4308153_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 4.166e-209 658.0
MMD3_k127_4308153_2 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 421.0
MMD3_k127_4308153_3 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 406.0
MMD3_k127_4308153_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 301.0
MMD3_k127_4308153_5 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000006091 220.0
MMD3_k127_4308153_6 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 - - 0.000000000000000000000000000000007362 141.0
MMD3_k127_4308153_7 cyclic nucleotide binding K10914,K16922 - - 0.0000000000000001423 85.0
MMD3_k127_4315842_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 506.0
MMD3_k127_4315842_1 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000001548 186.0
MMD3_k127_4315842_2 FAD binding domain K11472 - - 0.000000000000000000000000000000006928 135.0
MMD3_k127_4315842_3 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000152 66.0
MMD3_k127_4335693_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 392.0
MMD3_k127_4335693_1 MMPL family K07003 - - 0.00000000000000000000000001566 120.0
MMD3_k127_4335693_2 Caenorhabditis protein of unknown function, DUF268 - - - 0.0000000000000000000002448 106.0
MMD3_k127_4337445_0 PDZ domain (Also known as DHR or GLGF) K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 351.0
MMD3_k127_4337445_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 329.0
MMD3_k127_4337445_2 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000003741 199.0
MMD3_k127_4337445_3 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant - - - 0.0000000000000000000000000000000000000000000000000000102 196.0
MMD3_k127_4337445_4 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000002023 164.0
MMD3_k127_4337445_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000389 53.0
MMD3_k127_4337445_6 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000002702 50.0
MMD3_k127_4343485_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 346.0
MMD3_k127_4343485_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 319.0
MMD3_k127_4343485_2 PFAM 4Fe-4S ferredoxin K08358 - - 0.00000000000000000000000000000000000000000000000000000002003 198.0
MMD3_k127_4346264_0 transferase activity, transferring glycosyl groups K13057 - 2.4.1.245 1.17e-204 645.0
MMD3_k127_4346264_1 chloride channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 597.0
MMD3_k127_4346264_2 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 481.0
MMD3_k127_4346264_3 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 341.0
MMD3_k127_4346264_4 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 324.0
MMD3_k127_4346264_5 Thioredoxin-like - - - 0.0000000000000000000000005127 113.0
MMD3_k127_4346264_6 Virulence factor BrkB K07058 - - 0.000000000000000000000005254 113.0
MMD3_k127_4346264_7 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.0000000000000001878 80.0
MMD3_k127_4346264_9 Integral membrane protein TerC family - - - 0.00005258 49.0
MMD3_k127_4389134_0 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 569.0
MMD3_k127_4389134_1 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000001049 118.0
MMD3_k127_4389134_2 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000001321 94.0
MMD3_k127_4389134_3 23S rRNA-intervening sequence protein - - - 0.00000003873 55.0
MMD3_k127_4389134_6 Universal stress protein - - - 0.0000299 48.0
MMD3_k127_44003_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1238.0
MMD3_k127_44003_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1049.0
MMD3_k127_44003_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 328.0
MMD3_k127_44003_3 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002071 246.0
MMD3_k127_44003_4 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000891 211.0
MMD3_k127_44003_5 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000002291 178.0
MMD3_k127_44003_6 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.000000000000000000000000000000000000025 153.0
MMD3_k127_44003_7 MlaD protein K02067 - - 0.0000000000000000000004125 108.0
MMD3_k127_4410497_0 PFAM ABC transporter related K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000969 312.0
MMD3_k127_4410497_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000007281 244.0
MMD3_k127_4410497_2 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000001521 224.0
MMD3_k127_4410497_3 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000002505 230.0
MMD3_k127_4410497_4 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000009345 189.0
MMD3_k127_4410497_5 NMT1-like family K02051 - - 0.0000001772 54.0
MMD3_k127_4412617_0 kinase related to galactokinase and mevalonate kinase K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 528.0
MMD3_k127_4412617_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 503.0
MMD3_k127_4412617_2 Nucleotidyl transferase K15669 - 2.7.7.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005257 277.0
MMD3_k127_4412617_3 PFAM Dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000001651 194.0
MMD3_k127_4412617_4 MerR HTH family regulatory protein - - - 0.000000001121 63.0
MMD3_k127_4424653_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1243.0
MMD3_k127_4424653_1 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.0000000000000000000000000000000000000001825 164.0
MMD3_k127_4424653_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000002467 138.0
MMD3_k127_4424653_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000005111 113.0
MMD3_k127_4424653_4 Conserved hypothetical protein 698 - - - 0.0000000098 58.0
MMD3_k127_4455580_0 TRAP-type mannitol chloroaromatic compound transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000005424 238.0
MMD3_k127_4455580_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000002421 117.0
MMD3_k127_4455580_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000008989 116.0
MMD3_k127_4455580_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) - - - 0.000002332 52.0
MMD3_k127_450271_0 Ribosomal protein S2 K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 359.0
MMD3_k127_450271_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 337.0
MMD3_k127_450271_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 298.0
MMD3_k127_450271_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 290.0
MMD3_k127_450271_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000002203 216.0
MMD3_k127_450271_5 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000004889 187.0
MMD3_k127_4505027_0 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 411.0
MMD3_k127_4505027_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 344.0
MMD3_k127_4505027_2 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000002354 263.0
MMD3_k127_4505065_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 523.0
MMD3_k127_4505065_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 373.0
MMD3_k127_4505065_2 CoA binding domain K09181 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000042 296.0
MMD3_k127_4506003_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 440.0
MMD3_k127_4506003_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.000000000000000000000000000000003992 134.0
MMD3_k127_4506003_2 Domain of unknown function (DUF1850) - - - 0.00000000000003985 79.0
MMD3_k127_4506003_3 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.00001275 47.0
MMD3_k127_4509174_0 Amino acid permease - - - 1.493e-256 807.0
MMD3_k127_4509174_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000001133 220.0
MMD3_k127_4509174_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000002244 79.0
MMD3_k127_4509174_3 AAA ATPase domain - - - 0.00000000000004936 83.0
MMD3_k127_4511241_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 4.275e-234 741.0
MMD3_k127_4511241_1 family UPF0027 K14415 - 6.5.1.3 0.00000000000001421 74.0
MMD3_k127_4514830_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 6.848e-231 735.0
MMD3_k127_4514830_1 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000478 284.0
MMD3_k127_4514830_2 Acylphosphatase K01512 - 3.6.1.7 0.00000000000004475 73.0
MMD3_k127_4515064_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.0 1339.0
MMD3_k127_4515064_1 cell adhesion involved in biofilm formation K07407 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 378.0
MMD3_k127_4515064_2 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 360.0
MMD3_k127_4515064_3 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 331.0
MMD3_k127_4515064_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 309.0
MMD3_k127_4515064_5 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000006728 157.0
MMD3_k127_4515064_6 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.00000000000000000000000002129 110.0
MMD3_k127_4515064_7 PFAM Thioredoxin K03671 - - 0.0000000000000000000005388 106.0
MMD3_k127_4515064_8 Belongs to the 5'-nucleotidase family K01081,K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000007795 98.0
MMD3_k127_4516325_0 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 397.0
MMD3_k127_4516325_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 382.0
MMD3_k127_4516325_2 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000001746 220.0
MMD3_k127_4516325_3 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000002106 76.0
MMD3_k127_4524408_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 304.0
MMD3_k127_4524408_1 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004187 271.0
MMD3_k127_4524408_2 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000003794 166.0
MMD3_k127_4524408_3 - - - - 0.000000000002485 71.0
MMD3_k127_4529459_0 ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003174 268.0
MMD3_k127_4529459_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004702 270.0
MMD3_k127_4529459_2 Abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000979 248.0
MMD3_k127_4529459_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000001405 222.0
MMD3_k127_4529459_4 PFAM 6-phosphogluconate dehydrogenase NAD-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000003411 215.0
MMD3_k127_4529459_5 Receptor family ligand binding region K01999 - - 0.0000001623 53.0
MMD3_k127_4531960_0 Beta-Casp domain K07576 - - 5.377e-226 707.0
MMD3_k127_4531960_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 408.0
MMD3_k127_4533466_0 COG0553 Superfamily II DNA RNA - - - 0.0 1203.0
MMD3_k127_4533466_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 9.34e-322 1005.0
MMD3_k127_4533466_10 - - - - 0.0002535 50.0
MMD3_k127_4533466_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 9.121e-265 825.0
MMD3_k127_4533466_3 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 493.0
MMD3_k127_4533466_4 SWIM zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 342.0
MMD3_k127_4533466_5 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009268 282.0
MMD3_k127_4533466_6 Hsp20/alpha crystallin family - - - 0.000000000000000000000003522 107.0
MMD3_k127_4533466_7 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000001182 91.0
MMD3_k127_4533466_8 AAA-4 family - - - 0.000009475 49.0
MMD3_k127_4533466_9 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00002557 46.0
MMD3_k127_4537453_0 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 397.0
MMD3_k127_4537453_1 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000001549 128.0
MMD3_k127_4538356_0 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000001716 222.0
MMD3_k127_4538356_1 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000001818 140.0
MMD3_k127_4539049_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 527.0
MMD3_k127_4539049_1 Conserved hypothetical protein (Lin0512_fam) - - - 0.00000000000000000000000000000002829 128.0
MMD3_k127_4539049_2 4Fe-4S dicluster domain K00196 - - 0.00000002838 57.0
MMD3_k127_4549036_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 560.0
MMD3_k127_4549036_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 433.0
MMD3_k127_4549036_2 Glycosyl transferase family 2 K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 433.0
MMD3_k127_4549036_3 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 401.0
MMD3_k127_4549036_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 389.0
MMD3_k127_4549036_5 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 357.0
MMD3_k127_4549036_6 Short chain fatty acid transporter K02106 - - 0.000000000000000000000000000000000000000000000000000000000000288 229.0
MMD3_k127_4549036_7 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000002249 100.0
MMD3_k127_4552564_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 371.0
MMD3_k127_4552564_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 299.0
MMD3_k127_4552564_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000114 258.0
MMD3_k127_4552564_3 KR domain K22322 - 1.1.1.413 0.00000000000000000000000000003941 122.0
MMD3_k127_4552564_4 Transcriptional regulator - - - 0.00000000000000003801 94.0
MMD3_k127_4552649_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 491.0
MMD3_k127_4552649_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 448.0
MMD3_k127_4552649_10 Putative regulatory protein - - - 0.00000002097 57.0
MMD3_k127_4552649_12 TrkA-C domain K03499 - - 0.00008771 51.0
MMD3_k127_4552649_13 - - - - 0.0001788 53.0
MMD3_k127_4552649_2 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 346.0
MMD3_k127_4552649_3 MFS_1 like family K08161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 312.0
MMD3_k127_4552649_4 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 298.0
MMD3_k127_4552649_5 PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000003326 224.0
MMD3_k127_4552649_6 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000001513 153.0
MMD3_k127_4552649_7 translation release factor activity K03265 - - 0.000000000000000000000000000000007517 142.0
MMD3_k127_4552649_8 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000001729 138.0
MMD3_k127_4552649_9 - - - - 0.0000000000000001237 85.0
MMD3_k127_4557802_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 352.0
MMD3_k127_4557802_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002885 274.0
MMD3_k127_4557802_2 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000002471 145.0
MMD3_k127_4557802_3 response regulator K07814 - - 0.0000000000000000000000000000000656 132.0
MMD3_k127_4557802_4 Methyltransferase, YaeB family - - - 0.00000000000000000000000000001601 123.0
MMD3_k127_4557802_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000003885 80.0
MMD3_k127_4557802_6 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000957 46.0
MMD3_k127_4557802_7 - - - - 0.000778 46.0
MMD3_k127_4558196_0 PFAM 2-nitropropane dioxygenase NPD K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 367.0
MMD3_k127_4558196_1 Radical SAM - - - 0.000000000000000000000000000000000000000001451 159.0
MMD3_k127_4558196_2 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000002571 136.0
MMD3_k127_4558196_3 Transposase - - - 0.0000008214 53.0
MMD3_k127_4560642_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000005253 255.0
MMD3_k127_4560642_1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.00000000000000000000000000000000000000000005628 163.0
MMD3_k127_4560642_2 - - - - 0.000000000000000000000000000000000000000002172 165.0
MMD3_k127_4560642_3 Alkylmercury lyase - - - 0.0000000000000000000001115 100.0
MMD3_k127_4560642_4 Alkylmercury lyase - - - 0.0000000255 57.0
MMD3_k127_4564292_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 4.741e-244 780.0
MMD3_k127_4564292_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 518.0
MMD3_k127_4564292_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 501.0
MMD3_k127_4564292_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000603 260.0
MMD3_k127_4565850_0 HMGL-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 546.0
MMD3_k127_4565850_1 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000017 229.0
MMD3_k127_4565850_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000003488 112.0
MMD3_k127_4589746_0 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 534.0
MMD3_k127_4589746_1 - - - - 0.0000000000000000000007014 101.0
MMD3_k127_4598347_0 - - - - 6.239e-232 722.0
MMD3_k127_4598347_2 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000001413 145.0
MMD3_k127_4598347_3 DsrE/DsrF-like family - - - 0.000000000000000000000000000000011 138.0
MMD3_k127_4598347_4 COGs COG0589 Universal stress protein UspA and related nucleotide-binding protein - - - 0.00000000000000000000006738 104.0
MMD3_k127_4598347_5 GlcNAc-PI de-N-acetylase - - - 0.0000001547 53.0
MMD3_k127_4599330_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 469.0
MMD3_k127_4599330_1 regulation of RNA biosynthetic process - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 338.0
MMD3_k127_4599330_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000003402 192.0
MMD3_k127_4599330_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000009987 144.0
MMD3_k127_4599330_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties - - - 0.000000000000003585 75.0
MMD3_k127_4599330_5 Protein of unknown function (DUF1523) - - - 0.000000006279 61.0
MMD3_k127_4602700_0 SMART AAA ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 452.0
MMD3_k127_4602700_1 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000364 248.0
MMD3_k127_4602700_2 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000001059 143.0
MMD3_k127_4602700_3 Extracellular solute-binding protein K02027 GO:0003674,GO:0005488,GO:0006810,GO:0008150,GO:0008643,GO:0009743,GO:0009758,GO:0009987,GO:0010033,GO:0030246,GO:0042221,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071310,GO:0071322,GO:0071702,GO:1901700,GO:1901701 - 0.000000000003173 72.0
MMD3_k127_4602700_5 Type II secretion system protein B K02451 - - 0.00001456 57.0
MMD3_k127_4605664_0 Pterin binding enzyme K15023 - 2.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 376.0
MMD3_k127_4605664_1 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000001422 137.0
MMD3_k127_4612841_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 2.315e-239 752.0
MMD3_k127_4612841_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000001163 227.0
MMD3_k127_4612841_2 L-2-amino-thiazoline-4-carboxylic acid hydrolase - - - 0.0000000000000000000000000000000000000000001979 161.0
MMD3_k127_4612841_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000005186 152.0
MMD3_k127_4612841_4 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000003716 135.0
MMD3_k127_4620717_0 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 376.0
MMD3_k127_4620717_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000001045 209.0
MMD3_k127_4621446_0 Cellulose synthase K00694 - 2.4.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007587 566.0
MMD3_k127_4623142_0 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 376.0
MMD3_k127_4623142_1 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000294 248.0
MMD3_k127_4623142_2 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000008372 108.0
MMD3_k127_4630914_0 TIGRFAM leucyl-tRNA synthetase K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1198.0
MMD3_k127_4630914_1 Lipoprotein - - - 5.622e-251 803.0
MMD3_k127_4630914_2 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 325.0
MMD3_k127_4630914_3 - - - - 0.0000000000000000000000000000000000000000000000000007362 196.0
MMD3_k127_4631600_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.11e-208 663.0
MMD3_k127_4631600_1 TIGRFAM type IV-A pilus assembly ATPase PilB K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 558.0
MMD3_k127_4636276_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 544.0
MMD3_k127_4636276_1 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 447.0
MMD3_k127_4636276_2 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001958 271.0
MMD3_k127_4636276_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000001299 70.0
MMD3_k127_4640253_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 611.0
MMD3_k127_4640253_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000972 432.0
MMD3_k127_4640253_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 305.0
MMD3_k127_4640253_3 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000000001799 193.0
MMD3_k127_4640253_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000001412 84.0
MMD3_k127_4643459_0 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 462.0
MMD3_k127_4649270_0 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 308.0
MMD3_k127_4649270_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 297.0
MMD3_k127_4649270_2 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000002897 223.0
MMD3_k127_4650685_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 381.0
MMD3_k127_4650685_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000002613 61.0
MMD3_k127_4650685_2 - - - - 0.00001474 53.0
MMD3_k127_4650844_0 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 310.0
MMD3_k127_4650844_1 Ppx/GppA phosphatase family K01524 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0040007,GO:0044237,GO:0044464,GO:0071944 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000009148 198.0
MMD3_k127_4650844_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000004903 123.0
MMD3_k127_4650844_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000001569 98.0
MMD3_k127_4653812_0 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 610.0
MMD3_k127_4653812_1 MgtE intracellular - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 491.0
MMD3_k127_4653812_2 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 310.0
MMD3_k127_4661405_0 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 421.0
MMD3_k127_4661405_1 glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006349 284.0
MMD3_k127_4661405_2 transporter, DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000007582 218.0
MMD3_k127_4661405_3 extracellular solute-binding protein, family 7 K11688 - - 0.0000000000000000000000000000000000000000000664 173.0
MMD3_k127_4661405_4 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000006889 119.0
MMD3_k127_4661405_5 formate C-acetyltransferase activity K20038 GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006576,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009308,GO:0009310,GO:0009987,GO:0016829,GO:0016840,GO:0019695,GO:0033265,GO:0034641,GO:0042133,GO:0042135,GO:0042165,GO:0042402,GO:0042426,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044106,GO:0044237,GO:0044248,GO:0046983,GO:0065007,GO:0065008,GO:0070405,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901575 4.3.99.4 0.0000000000000000000000000015 115.0
MMD3_k127_466286_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 350.0
MMD3_k127_466286_1 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009989 262.0
MMD3_k127_466286_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000009066 237.0
MMD3_k127_466286_3 COG0411 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000002366 74.0
MMD3_k127_4671096_0 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 556.0
MMD3_k127_4671096_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 511.0
MMD3_k127_4671096_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000003372 100.0
MMD3_k127_4673085_0 sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 511.0
MMD3_k127_4673085_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000002336 175.0
MMD3_k127_4673085_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000003692 97.0
MMD3_k127_4673085_3 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00002294 51.0
MMD3_k127_4674532_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1059.0
MMD3_k127_4679230_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000009493 215.0
MMD3_k127_4679230_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000003263 188.0
MMD3_k127_4689661_0 Protein of unknown function (DUF402) K07586,K09145 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 316.0
MMD3_k127_4689661_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001289 269.0
MMD3_k127_4689742_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 524.0
MMD3_k127_4689742_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 350.0
MMD3_k127_4689742_2 UbiA prenyltransferase family - - - 0.0000000001623 62.0
MMD3_k127_4692217_0 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 492.0
MMD3_k127_4692217_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000007519 212.0
MMD3_k127_4692217_2 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000009697 186.0
MMD3_k127_4692217_3 acetyltransferase K18815 - 2.3.1.82 0.0000000000000000000000000000001888 131.0
MMD3_k127_4694389_0 PFAM Radical SAM K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 330.0
MMD3_k127_4694389_1 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000008726 53.0
MMD3_k127_4704905_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 9.727e-199 634.0
MMD3_k127_4704905_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 525.0
MMD3_k127_4704905_3 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000004119 148.0
MMD3_k127_4704905_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000002315 104.0
MMD3_k127_4704905_5 Domain of Unknown Function (DUF350) - - - 0.00000000000000000195 86.0
MMD3_k127_4710523_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 551.0
MMD3_k127_4710523_1 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 399.0
MMD3_k127_4710523_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000003166 219.0
MMD3_k127_4719104_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 556.0
MMD3_k127_4719104_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K19071 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 468.0
MMD3_k127_4719104_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 402.0
MMD3_k127_4719104_3 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000007506 96.0
MMD3_k127_4719104_4 Methyltransferase domain - - - 0.000000000000769 79.0
MMD3_k127_4723643_0 CoA binding domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 497.0
MMD3_k127_4723643_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 305.0
MMD3_k127_4723643_2 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000001366 222.0
MMD3_k127_4723643_3 - - - - 0.0000000000000000000003014 99.0
MMD3_k127_4723898_0 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001172 261.0
MMD3_k127_4723898_1 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000003274 248.0
MMD3_k127_4723898_2 PFAM peptidase U32 K08303 - - 0.000000000000000003572 91.0
MMD3_k127_4724642_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 408.0
MMD3_k127_4724642_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 369.0
MMD3_k127_4724642_2 - - - - 0.0000000000003948 75.0
MMD3_k127_4727718_0 Protein of unknown function, DUF255 K06888 - - 4.571e-259 812.0
MMD3_k127_4727718_1 Rubredoxin - - - 0.0000000000005186 68.0
MMD3_k127_4730416_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 308.0
MMD3_k127_4730416_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000003037 239.0
MMD3_k127_4730416_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000001499 111.0
MMD3_k127_4730416_3 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00001123 50.0
MMD3_k127_4736148_0 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000002995 243.0
MMD3_k127_4736148_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000007887 207.0
MMD3_k127_4736148_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000000007511 120.0
MMD3_k127_4736148_3 - - - - 0.000000000000000000000004691 104.0
MMD3_k127_4755681_0 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 483.0
MMD3_k127_4755681_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 450.0
MMD3_k127_4755681_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 323.0
MMD3_k127_4755681_3 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000000000000000000000000000000000000001053 234.0
MMD3_k127_4755681_4 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000001929 224.0
MMD3_k127_4755681_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001489 208.0
MMD3_k127_4755681_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000002613 175.0
MMD3_k127_4755681_7 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000007262 158.0
MMD3_k127_4777481_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 488.0
MMD3_k127_4777481_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 372.0
MMD3_k127_4777481_2 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000001531 119.0
MMD3_k127_4777481_3 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000001715 100.0
MMD3_k127_4777481_4 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.00000000000005288 72.0
MMD3_k127_4793691_0 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006221 271.0
MMD3_k127_4793691_1 PFAM Bacterial regulatory proteins, gntR family - - - 0.0000000000000000000000000000000000007437 148.0
MMD3_k127_4793691_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000001724 106.0
MMD3_k127_4793691_3 Lipoate-protein ligase K03800 - 6.3.1.20 0.0000000000001266 82.0
MMD3_k127_4793691_4 Non-ribosomal peptide synthetase modules and related proteins K15654,K15655 - - 0.000004154 53.0
MMD3_k127_4807556_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 347.0
MMD3_k127_4807556_1 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000001271 178.0
MMD3_k127_4815830_0 carbon starvation protein CstA K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 388.0
MMD3_k127_4821531_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 6.356e-212 667.0
MMD3_k127_4821531_1 PFAM PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000002136 221.0
MMD3_k127_4821531_2 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000102 196.0
MMD3_k127_4821531_3 PHP domain protein - - - 0.000000000000000000000000000000000000302 145.0
MMD3_k127_4821531_4 - - - - 0.00000000000000000002215 93.0
MMD3_k127_4838933_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000176 280.0
MMD3_k127_4838933_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005271 263.0
MMD3_k127_4838933_2 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000001615 160.0
MMD3_k127_4838933_3 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000005515 81.0
MMD3_k127_4853326_0 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 323.0
MMD3_k127_4853326_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 294.0
MMD3_k127_4853326_2 Protein of unknown function (DUF917) K09703 - - 0.000000000000000000000000000000000000000000000000000000000000000000002116 244.0
MMD3_k127_4853326_3 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000003631 255.0
MMD3_k127_4853326_4 - - - - 0.000000000000433 75.0
MMD3_k127_4855265_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 490.0
MMD3_k127_4855265_1 Peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 429.0
MMD3_k127_4855265_2 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 353.0
MMD3_k127_4855265_3 Membrane - GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000000000000000000001589 162.0
MMD3_k127_4862598_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 463.0
MMD3_k127_4862598_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 464.0
MMD3_k127_4862598_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 431.0
MMD3_k127_4862598_3 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 372.0
MMD3_k127_4862598_4 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 328.0
MMD3_k127_4865917_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 1.381e-196 624.0
MMD3_k127_4865917_1 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 452.0
MMD3_k127_4865917_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003507 271.0
MMD3_k127_4865917_3 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004664 256.0
MMD3_k127_4865917_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000003233 99.0
MMD3_k127_4904102_0 belongs to the CobB CobQ family K13788 - 2.3.1.8 1.465e-241 767.0
MMD3_k127_4904102_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 492.0
MMD3_k127_4904102_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K14086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001088 280.0
MMD3_k127_4904102_3 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000002039 218.0
MMD3_k127_4904102_4 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000000001184 139.0
MMD3_k127_4910586_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.106e-207 659.0
MMD3_k127_4920143_0 - - - - 0.000000000000000000000000000000000000000000002394 171.0
MMD3_k127_4920143_1 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000000000000306 130.0
MMD3_k127_4920143_2 - - - - 0.00000000000000000000000000001457 123.0
MMD3_k127_4922823_0 PFAM extracellular solute-binding protein family 1 K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 463.0
MMD3_k127_4922823_1 Beta-lactamase superfamily domain K03476 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 402.0
MMD3_k127_4922823_2 transmembrane transport K02025,K15771 - - 0.000000000000000000000000000000000000000000000000000000000000000000002456 243.0
MMD3_k127_4924555_0 PFAM Type II secretion system protein E K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 616.0
MMD3_k127_4924555_1 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 462.0
MMD3_k127_4924555_2 General secretion pathway protein F K02455,K02653 - - 0.00000002521 56.0
MMD3_k127_4925579_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 428.0
MMD3_k127_4925579_1 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.00000000000000000000000000000000000000000000000000000000001103 211.0
MMD3_k127_4925579_2 PIN domain - - - 0.00000000000000000000000000392 117.0
MMD3_k127_4925579_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000005352 53.0
MMD3_k127_4925579_4 plasmid stabilization protein K21495 - - 0.00001617 50.0
MMD3_k127_4936141_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 477.0
MMD3_k127_4936141_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001052 269.0
MMD3_k127_4936141_2 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001994 249.0
MMD3_k127_4936141_3 Putative zinc-finger - - - 0.00000000000000000000000000003093 122.0
MMD3_k127_4936141_4 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000003442 113.0
MMD3_k127_4952157_0 RNA-binding protein homologous to eukaryotic snRNP - - - 0.000000000000000000000000000000000000000000000000000000000000136 230.0
MMD3_k127_4952157_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001483 224.0
MMD3_k127_4952157_2 EamA-like transporter family - - - 0.0000000000000000000000000001784 119.0
MMD3_k127_4952265_0 DEAD/H associated K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 309.0
MMD3_k127_4952265_1 SpoVT / AbrB like domain - - - 0.00000000000000000000000000000000003956 136.0
MMD3_k127_4952265_2 PIN domain - - - 0.00000000000000002816 86.0
MMD3_k127_4959799_0 SMART chemotaxis sensory transducer K03406,K13487 - - 0.00000000000000000000000000000000000000000000000000000000000005771 238.0
MMD3_k127_4959799_1 PAS fold - - - 0.000000000000000000000000000000000483 151.0
MMD3_k127_4980155_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.326e-307 954.0
MMD3_k127_4980155_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 433.0
MMD3_k127_4980155_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 425.0
MMD3_k127_4980155_3 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 403.0
MMD3_k127_4980155_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006633 389.0
MMD3_k127_4980155_5 Periplasmic binding protein K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000006542 230.0
MMD3_k127_4980155_6 Protein of unknown function (DUF1059) - - - 0.000005952 54.0
MMD3_k127_4983199_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 435.0
MMD3_k127_4983199_1 PFAM permease YjgP YjgQ family protein K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003401 287.0
MMD3_k127_4983199_2 Valyl tRNA synthetase tRNA binding arm K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001248 259.0
MMD3_k127_4983199_3 Permease YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000002014 223.0
MMD3_k127_4989574_0 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 343.0
MMD3_k127_4989574_1 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 289.0
MMD3_k127_4989574_2 PFAM Silent information regulator protein Sir2 K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000048 276.0
MMD3_k127_4989574_3 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008532 271.0
MMD3_k127_4989574_4 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000001145 173.0
MMD3_k127_4989574_5 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000521 170.0
MMD3_k127_4989574_6 Helix-hairpin-helix motif K02237 - - 0.0000000000000000003501 96.0
MMD3_k127_4989574_7 sequence-specific DNA binding - - - 0.00000000000000005387 84.0
MMD3_k127_4989574_8 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00928,K12524 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.000000003929 57.0
MMD3_k127_4998076_0 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000002535 130.0
MMD3_k127_5001048_0 elongation factor Tu domain 2 protein K02355 - - 5.623e-259 815.0
MMD3_k127_5001048_1 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 344.0
MMD3_k127_5001048_2 molybdenum cofactor - - - 0.0000000000000000000000000000000000000000000000000000000001825 207.0
MMD3_k127_5001048_3 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000005367 196.0
MMD3_k127_5001048_4 - - - - 0.00000000000000000000000003346 119.0
MMD3_k127_5001277_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 456.0
MMD3_k127_5001277_1 OsmC-like protein K09136 - - 0.000000000000000000000002243 106.0
MMD3_k127_5030000_0 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 299.0
MMD3_k127_5030000_1 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.00000000000000000000000000000000000000002601 156.0
MMD3_k127_5030000_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000006355 132.0
MMD3_k127_5043955_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.203e-264 820.0
MMD3_k127_5043955_1 membrane K07794 - - 0.000000000000000000000000000000000000000000000000001038 186.0
MMD3_k127_5043955_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000005211 111.0
MMD3_k127_5045035_0 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 595.0
MMD3_k127_5045035_1 Belongs to the TPP enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001277 266.0
MMD3_k127_5048047_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 304.0
MMD3_k127_5048047_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 298.0
MMD3_k127_5048047_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000004596 80.0
MMD3_k127_5048047_3 acyl-coa dehydrogenase - - - 0.0000000000005705 70.0
MMD3_k127_5048047_4 DNA polymerase alpha chain like domain - - - 0.0000000001378 69.0
MMD3_k127_5048047_5 Sterol carrier protein - - - 0.000000000627 70.0
MMD3_k127_5048047_6 SCP-2 sterol transfer family - - - 0.00000008112 64.0
MMD3_k127_5095264_0 Histidine kinase K07646 - 2.7.13.3 3.993e-319 999.0
MMD3_k127_5095264_1 Two component transcriptional regulator, winged helix family K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 346.0
MMD3_k127_5095264_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000005158 245.0
MMD3_k127_53450_0 methylmalonyl-CoA mutase N-terminal domain K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 539.0
MMD3_k127_53450_1 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000003284 164.0
MMD3_k127_535671_0 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000377 198.0
MMD3_k127_535671_1 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16783,K16785 - - 0.0000000000000000000000000000000000000000000000002771 183.0
MMD3_k127_535671_2 RNA methyltransferase, RsmD family K08316 - 2.1.1.171 0.00000000000000000000000000000000000000004854 157.0
MMD3_k127_547533_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 5.055e-251 832.0
MMD3_k127_547533_1 POTRA domain TamA domain 1 K07277,K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 520.0
MMD3_k127_547533_2 Rad17 cell cycle checkpoint protein K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000004986 228.0
MMD3_k127_547533_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000001022 227.0
MMD3_k127_547533_4 Universal stress protein family - - - 0.0000007485 55.0
MMD3_k127_558009_0 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 400.0
MMD3_k127_558009_1 Caenorhabditis protein of unknown function, DUF268 - - - 0.000000000000000000001167 102.0
MMD3_k127_558009_2 - - - - 0.00004129 50.0
MMD3_k127_587826_0 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000002271 224.0
MMD3_k127_587826_1 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000004239 117.0
MMD3_k127_619316_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.195e-268 842.0
MMD3_k127_619316_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000115 166.0
MMD3_k127_619316_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.0000000001711 62.0
MMD3_k127_644440_0 COG3839 ABC-type sugar transport systems, ATPase components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 500.0
MMD3_k127_644440_1 FAD dependent oxidoreductase K07137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 504.0
MMD3_k127_644440_2 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 343.0
MMD3_k127_646007_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 514.0
MMD3_k127_646007_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 486.0
MMD3_k127_646007_10 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000005748 78.0
MMD3_k127_646007_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 350.0
MMD3_k127_646007_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 318.0
MMD3_k127_646007_4 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 288.0
MMD3_k127_646007_5 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.00000000000000000000000000000000000000005527 164.0
MMD3_k127_646007_6 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000006632 141.0
MMD3_k127_646007_7 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000008595 134.0
MMD3_k127_646007_8 - - - - 0.000000000000000000001316 102.0
MMD3_k127_646007_9 extracellular solute-binding protein, family 5 K02035,K15584 - - 0.000000000000000203 82.0
MMD3_k127_649335_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 395.0
MMD3_k127_649335_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000005761 162.0
MMD3_k127_649335_2 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.000000000000000000000000000000007169 134.0
MMD3_k127_649335_3 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000001762 76.0
MMD3_k127_654834_0 Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 298.0
MMD3_k127_654834_1 Glycosyl Transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001089 243.0
MMD3_k127_657431_0 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 422.0
MMD3_k127_657431_1 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000001628 252.0
MMD3_k127_657431_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000002579 244.0
MMD3_k127_657431_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000001092 226.0
MMD3_k127_657431_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000009825 215.0
MMD3_k127_657431_5 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000002523 181.0
MMD3_k127_658872_0 - - - - 0.0000000000000000000000000000000000000000000000000000000003235 208.0
MMD3_k127_658872_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000001219 199.0
MMD3_k127_658872_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000001794 181.0
MMD3_k127_658872_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000004405 83.0
MMD3_k127_663532_0 Acyl-CoA dehydrogenase type 2 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 480.0
MMD3_k127_663532_1 phosphatase activity K05967 - - 0.0000000000000000000000001022 110.0
MMD3_k127_664234_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006668 612.0
MMD3_k127_664234_1 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 426.0
MMD3_k127_664234_2 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000003842 237.0
MMD3_k127_664764_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 471.0
MMD3_k127_664764_1 Tripartite tricarboxylate transporter TctB family - - - 0.00000007498 60.0
MMD3_k127_668506_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 586.0
MMD3_k127_668506_1 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004005 269.0
MMD3_k127_668506_2 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000005595 176.0
MMD3_k127_668506_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000002161 111.0
MMD3_k127_668506_4 COG3839 ABC-type sugar transport systems, ATPase components - - - 0.0003314 43.0
MMD3_k127_671267_0 B12 binding domain K04034 - 1.21.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 417.0
MMD3_k127_671267_1 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000008775 192.0
MMD3_k127_671267_2 polyketide synthase K12434 - - 0.000003884 52.0
MMD3_k127_680049_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 501.0
MMD3_k127_680049_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 339.0
MMD3_k127_680049_2 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 299.0
MMD3_k127_682490_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000001218 287.0
MMD3_k127_682490_1 4Fe-4S dicluster domain K08358 - - 0.00000000000000000000000006309 115.0
MMD3_k127_682490_2 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) - - - 0.0001444 49.0
MMD3_k127_68936_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 400.0
MMD3_k127_68936_1 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001978 227.0
MMD3_k127_68936_2 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000001211 188.0
MMD3_k127_68936_3 PIN domain - - - 0.00000000000000000000000000000000000000002839 158.0
MMD3_k127_68936_5 Domain of unknown function (DUF362) K07138 - - 0.000000000000001808 78.0
MMD3_k127_68949_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 453.0
MMD3_k127_68949_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 310.0
MMD3_k127_68949_2 COG COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000006737 104.0
MMD3_k127_68949_3 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.0000000000000000000005214 96.0
MMD3_k127_700845_0 Domain of unknown function (DUF2088) - - - 2.101e-202 637.0
MMD3_k127_700845_1 alcohol dehydrogenase K00043 - 1.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 302.0
MMD3_k127_700845_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000006094 219.0
MMD3_k127_700845_3 cellulase activity K01387 - 3.4.24.3 0.00000000000000004168 86.0
MMD3_k127_700845_4 - - - - 0.00000005186 58.0
MMD3_k127_705179_0 FMN-dependent alpha-hydroxy acid dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 375.0
MMD3_k127_705179_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 370.0
MMD3_k127_705179_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002279 262.0
MMD3_k127_70522_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 467.0
MMD3_k127_70522_1 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.000000000000000000000000005629 126.0
MMD3_k127_70522_2 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000007816 101.0
MMD3_k127_70522_3 RNA recognition motif - - - 0.00000000000000005728 85.0
MMD3_k127_70522_4 Lysin motif - - - 0.0000003267 55.0
MMD3_k127_709337_0 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000003302 198.0
MMD3_k127_709337_1 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000005251 193.0
MMD3_k127_709337_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000002443 98.0
MMD3_k127_71222_0 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01535 - 3.6.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 336.0
MMD3_k127_71222_1 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000003937 194.0
MMD3_k127_71222_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000001659 142.0
MMD3_k127_714624_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 592.0
MMD3_k127_714624_1 DinB family - - - 0.00000002547 60.0
MMD3_k127_714624_2 Molybdopterin converting factor, small subunit K03636 - - 0.0003634 47.0
MMD3_k127_722399_0 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 381.0
MMD3_k127_722399_1 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 378.0
MMD3_k127_722399_2 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001094 252.0
MMD3_k127_722510_0 PFAM sigma-54 factor interaction domain-containing protein K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 451.0
MMD3_k127_722510_1 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 358.0
MMD3_k127_722510_2 flagellar motor switch protein FliG K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 289.0
MMD3_k127_722510_3 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.0000000000000000000000000000000002621 136.0
MMD3_k127_722510_4 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000001372 110.0
MMD3_k127_722510_5 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000004682 61.0
MMD3_k127_7238_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 8.095e-195 619.0
MMD3_k127_7238_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 482.0
MMD3_k127_7238_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 306.0
MMD3_k127_7238_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 295.0
MMD3_k127_7238_4 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001309 281.0
MMD3_k127_7238_5 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000001103 228.0
MMD3_k127_7238_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000001282 202.0
MMD3_k127_728809_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 2.815e-194 621.0
MMD3_k127_728809_1 UPF0210 protein K09157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 568.0
MMD3_k127_728809_2 2Fe-2S -binding domain K13483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001273 265.0
MMD3_k127_730190_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 3.964e-229 723.0
MMD3_k127_730190_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 512.0
MMD3_k127_730190_2 FMN-dependent dehydrogenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000002552 235.0
MMD3_k127_730190_3 - - - - 0.0000000000000000000000000008172 128.0
MMD3_k127_730190_4 - - - - 0.00000000000000000000000003526 113.0
MMD3_k127_730190_5 Tetratricopeptide repeat-like domain - - - 0.00000000000000000323 94.0
MMD3_k127_732649_0 PrkA AAA domain K07180 - - 1.448e-272 846.0
MMD3_k127_732649_1 PFAM SpoVR like protein K06415 - - 2.447e-196 626.0
MMD3_k127_732649_2 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 459.0
MMD3_k127_732649_3 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.000000000000000000000000000004016 123.0
MMD3_k127_732649_4 - - - - 0.0000001228 61.0
MMD3_k127_738037_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 555.0
MMD3_k127_738037_1 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 399.0
MMD3_k127_738037_2 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 320.0
MMD3_k127_738037_3 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 287.0
MMD3_k127_738037_4 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005429 291.0
MMD3_k127_738037_5 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006629 280.0
MMD3_k127_738037_6 Arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009936 277.0
MMD3_k127_738037_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000006243 218.0
MMD3_k127_738037_8 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000001277 149.0
MMD3_k127_738037_9 Methyltransferase type 11 - - - 0.000000535 60.0
MMD3_k127_742821_0 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005532 285.0
MMD3_k127_742821_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000003708 201.0
MMD3_k127_742821_2 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000003826 109.0
MMD3_k127_742821_3 Psort location Cytoplasmic, score - - - 0.0000000000001988 78.0
MMD3_k127_742821_4 Transcriptional regulator - - - 0.000000000001615 76.0
MMD3_k127_746219_0 SMART alpha amylase, catalytic sub domain K01176 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 565.0
MMD3_k127_746219_1 Localisation of periplasmic protein complexes K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000005717 168.0
MMD3_k127_749047_0 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 366.0
MMD3_k127_749047_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000001478 189.0
MMD3_k127_749176_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 4.702e-239 758.0
MMD3_k127_749176_1 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000001516 67.0
MMD3_k127_749212_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 603.0
MMD3_k127_749212_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000009985 229.0
MMD3_k127_749212_2 - - - - 0.0000000000000000000000001525 110.0
MMD3_k127_749212_3 Tripartite tricarboxylate transporter TctB family - - - 0.0000000001762 68.0
MMD3_k127_750278_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 465.0
MMD3_k127_750278_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 313.0
MMD3_k127_75331_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 569.0
MMD3_k127_75331_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000003093 119.0
MMD3_k127_775093_0 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 484.0
MMD3_k127_775093_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 409.0
MMD3_k127_775093_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000007137 128.0
MMD3_k127_775093_3 - - - - 0.00000000003605 67.0
MMD3_k127_776171_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 436.0
MMD3_k127_776171_1 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003916 278.0
MMD3_k127_776171_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000002972 89.0
MMD3_k127_776510_0 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009627 522.0
MMD3_k127_781967_0 - - - - 0.0000000000000000000000000000000000000000000000000000985 192.0
MMD3_k127_786745_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2081.0
MMD3_k127_786745_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1556.0
MMD3_k127_786745_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.024e-314 976.0
MMD3_k127_786745_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 610.0
MMD3_k127_786745_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000183 240.0
MMD3_k127_786745_5 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000006078 220.0
MMD3_k127_786745_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000001019 168.0
MMD3_k127_786745_7 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000006117 137.0
MMD3_k127_790983_0 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001069 284.0
MMD3_k127_790983_1 repeat protein - - - 0.000000000000000000000000003112 113.0
MMD3_k127_790983_2 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.000002998 49.0
MMD3_k127_794483_0 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 359.0
MMD3_k127_794483_1 Belongs to the ompA family - - - 0.0000000000000000001032 91.0
MMD3_k127_794483_2 PFAM Hemerythrin HHE cation binding domain - - - 0.000000008634 58.0
MMD3_k127_794483_3 Helix-turn-helix domain - - - 0.0007529 46.0
MMD3_k127_799914_0 Ferrous iron transport protein B K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 414.0
MMD3_k127_799914_1 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 297.0
MMD3_k127_799914_2 ACT domain - - - 0.0000000000000000000000000000006304 129.0
MMD3_k127_802584_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 320.0
MMD3_k127_802584_1 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.0000000000000000000000000000001232 128.0
MMD3_k127_802584_2 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.00000005622 55.0
MMD3_k127_804347_0 VWA containing CoxE family protein K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 595.0
MMD3_k127_804347_1 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 454.0
MMD3_k127_804347_2 Protein of unknown function (DUF2845) - - - 0.000000000000000000000000000000001476 137.0
MMD3_k127_804347_3 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000001518 102.0
MMD3_k127_804347_4 Aminotransferase K00812,K00841,K10907 - 2.6.1.1 0.000000000001494 70.0
MMD3_k127_810211_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
MMD3_k127_810211_1 PFAM Stage II sporulation K06381 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001035 264.0
MMD3_k127_810211_2 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000001536 252.0
MMD3_k127_810211_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000002368 98.0
MMD3_k127_813222_0 SCP-2 sterol transfer family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 350.0
MMD3_k127_813222_1 reductase - - - 0.0000000000000000001697 89.0
MMD3_k127_813399_0 acetyl-CoA hydrolase K18118 - 2.8.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 328.0
MMD3_k127_813399_1 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 295.0
MMD3_k127_827374_0 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000004281 268.0
MMD3_k127_827374_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000001829 218.0
MMD3_k127_827374_2 fibronectin type III domain protein - - - 0.0000000000000000000000000000000001494 147.0
MMD3_k127_835233_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 587.0
MMD3_k127_835233_1 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 378.0
MMD3_k127_835233_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000005325 180.0
MMD3_k127_835233_3 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000001844 176.0
MMD3_k127_835233_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.00000001038 62.0
MMD3_k127_838854_0 synthase K00705,K06044 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009251,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0030978,GO:0030980,GO:0034637,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0047470,GO:0071704,GO:1901575,GO:1901576 2.4.1.25,5.4.99.15 0.0 1080.0
MMD3_k127_838854_1 Domain of unknown function (DUF3536) - - - 0.0 1068.0
MMD3_k127_838854_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700,K01236 - 2.4.1.18,3.2.1.141 1.97e-251 790.0
MMD3_k127_866681_0 Proposed homoserine kinase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009759 501.0
MMD3_k127_866681_1 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 428.0
MMD3_k127_866681_2 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.00000000000000000000000000000000000000002704 156.0
MMD3_k127_866681_3 GAF domain K02584 - - 0.000000000000000001322 93.0
MMD3_k127_873884_0 hexose biosynthetic process K01810 - 5.3.1.9 1.196e-289 896.0
MMD3_k127_873884_1 Male sterility protein - - - 0.00000002358 58.0
MMD3_k127_878355_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 6.391e-235 734.0
MMD3_k127_878355_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 1.445e-203 644.0
MMD3_k127_878355_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002909 260.0
MMD3_k127_878355_3 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000002801 225.0
MMD3_k127_878355_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000007829 215.0
MMD3_k127_878355_5 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000002689 182.0
MMD3_k127_878355_6 helix_turn_helix, Lux Regulon K02282 - - 0.000000000000000000000000000000000000000005851 159.0
MMD3_k127_878355_7 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000007665 151.0
MMD3_k127_879607_0 ATPase (AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002342 284.0
MMD3_k127_879607_1 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000004885 233.0
MMD3_k127_884873_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 535.0
MMD3_k127_884873_1 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 506.0
MMD3_k127_884873_2 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000001944 153.0
MMD3_k127_886039_0 COG1335 Amidases related to nicotinamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 471.0
MMD3_k127_886039_1 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000003042 136.0
MMD3_k127_886039_2 - - - - 0.0000000002539 66.0
MMD3_k127_888366_0 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 347.0
MMD3_k127_888366_1 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000004233 175.0
MMD3_k127_888366_2 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.00000000000001423 75.0
MMD3_k127_888366_3 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000009333 74.0
MMD3_k127_888366_4 Cupin domain - - - 0.00000000002874 68.0
MMD3_k127_893631_0 Belongs to the CarB family K01955 - 6.3.5.5 1.733e-195 619.0
MMD3_k127_893631_1 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 598.0
MMD3_k127_894238_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001043 274.0
MMD3_k127_894238_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000001798 164.0
MMD3_k127_894238_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000003664 132.0
MMD3_k127_894238_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000001714 104.0
MMD3_k127_894238_4 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000001154 95.0
MMD3_k127_895844_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00244,K00278 - 1.3.5.4,1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 424.0
MMD3_k127_895844_1 Cytochrome b/b6/petB K00412 - - 0.000000000000000000000000000000004625 139.0
MMD3_k127_896557_0 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000001494 243.0
MMD3_k127_896557_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000003613 142.0
MMD3_k127_899811_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 1.272e-227 713.0
MMD3_k127_899811_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 419.0
MMD3_k127_899811_2 oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 306.0
MMD3_k127_899811_3 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00015,K00058,K16843 - 1.1.1.26,1.1.1.310,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000007244 239.0
MMD3_k127_899811_4 Domains LysM, LysM, NLPC_P60 K19223 - - 0.0000000000000000000000000000000000000000000000000008792 197.0
MMD3_k127_899811_5 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000006866 160.0
MMD3_k127_899811_6 dehydratase - - - 0.0000000000000000000000000001485 115.0
MMD3_k127_899811_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000008661 71.0
MMD3_k127_90204_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000002285 119.0
MMD3_k127_90204_2 tetratricopeptide repeat - - - 0.0001 54.0
MMD3_k127_902849_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 4.575e-252 788.0
MMD3_k127_902849_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 526.0
MMD3_k127_902849_2 ABC transporter K02013,K05776 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 413.0
MMD3_k127_902849_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 291.0
MMD3_k127_902849_4 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000001422 219.0
MMD3_k127_902849_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000002247 215.0
MMD3_k127_90748_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 9.542e-240 749.0
MMD3_k127_911628_0 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 366.0
MMD3_k127_911628_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000003764 159.0
MMD3_k127_911628_2 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000009124 82.0
MMD3_k127_912001_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 574.0
MMD3_k127_912001_1 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 308.0
MMD3_k127_912001_10 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000002723 102.0
MMD3_k127_912001_11 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000001231 67.0
MMD3_k127_912001_12 Periplasmic binding protein domain K01999 - - 0.000000002799 69.0
MMD3_k127_912001_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 299.0
MMD3_k127_912001_3 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000003443 250.0
MMD3_k127_912001_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000004377 217.0
MMD3_k127_912001_5 nUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000000004248 198.0
MMD3_k127_912001_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000009197 168.0
MMD3_k127_912001_7 nucleic acid phosphodiester bond hydrolysis K07460 - - 0.0000000000000000000000000000001259 129.0
MMD3_k127_912001_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000004607 129.0
MMD3_k127_912001_9 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000002135 124.0
MMD3_k127_913016_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000001404 235.0
MMD3_k127_913016_1 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000000000005999 219.0
MMD3_k127_913016_2 RES - - - 0.00000000000000000000000000000001506 135.0
MMD3_k127_913016_3 Malonate decarboxylase, alpha subunit, transporter K01026 - 2.8.3.1 0.00000000000000000000001579 103.0
MMD3_k127_913016_4 Protein of unknown function (DUF2384) - - - 0.00000000000000000001867 106.0
MMD3_k127_917607_0 serine-type endopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 411.0
MMD3_k127_917607_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 393.0
MMD3_k127_917607_2 Phenazine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 383.0
MMD3_k127_917607_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 390.0
MMD3_k127_917607_4 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000001821 204.0
MMD3_k127_917607_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000001537 190.0
MMD3_k127_917607_6 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000000001014 132.0
MMD3_k127_917780_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000001013 185.0
MMD3_k127_917780_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000004606 134.0
MMD3_k127_917780_2 curli production assembly transport component CsgG - - - 0.00001623 58.0
MMD3_k127_919331_0 Dolichyl-phosphate-mannose-protein mannosyltransferase K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000007924 271.0
MMD3_k127_919331_1 Family 5 K02035 - - 0.0000000000000000000000000000000000000000000000004859 194.0
MMD3_k127_919331_2 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000001513 174.0
MMD3_k127_919331_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000005457 156.0
MMD3_k127_919331_4 Protein of unknown function (DUF3175) - - - 0.0000000000000000000000000000000002935 134.0
MMD3_k127_919780_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 606.0
MMD3_k127_919780_1 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 396.0
MMD3_k127_919780_2 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 302.0
MMD3_k127_919780_3 PFAM regulatory protein TetR K13770 - - 0.00000000000000000000000000001244 120.0
MMD3_k127_9215_0 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 300.0
MMD3_k127_9215_1 Electron transfer flavoprotein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001786 264.0
MMD3_k127_9215_2 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001444 249.0
MMD3_k127_9215_3 FAD dependent oxidoreductase K00313 - - 0.0000000000000000000000000000000000000000000000006238 179.0
MMD3_k127_9215_4 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K03855 - - 0.000000000000000000000000000000000000004656 148.0
MMD3_k127_929747_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 381.0
MMD3_k127_929747_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000001283 183.0
MMD3_k127_929747_2 Helix-turn-helix domain - - - 0.0000000000000000009066 99.0
MMD3_k127_93041_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 459.0
MMD3_k127_93041_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000002622 136.0
MMD3_k127_93041_2 PFAM response regulator receiver - - - 0.0000000000000000000000000000001009 130.0
MMD3_k127_93041_3 PFAM response regulator receiver - - - 0.000000000000000000000000000002607 127.0
MMD3_k127_933553_0 Uroporphyrinogen decarboxylase (URO-D) K01599,K14080 - 2.1.1.246,4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 399.0
MMD3_k127_933553_1 H( )-stimulated, divalent metal cation uptake system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 388.0
MMD3_k127_933553_2 helix_turn_helix, mercury resistance - - - 0.000000000000007473 80.0
MMD3_k127_933553_3 cobalamin binding K00548 - 2.1.1.13 0.0000002017 53.0
MMD3_k127_937796_0 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005194 254.0
MMD3_k127_953947_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00179 - 1.2.7.8 1.263e-219 696.0
MMD3_k127_953947_1 Flavoprotein family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 364.0
MMD3_k127_953947_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000002397 214.0
MMD3_k127_953947_3 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.00000000000000000000000000000000000000000000008626 176.0
MMD3_k127_997475_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 355.0
MMD3_k127_997475_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01190 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 328.0
MMD3_k127_997475_2 Cupin 2, conserved barrel domain protein K00971,K01809,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000001873 145.0
MMD3_k127_997475_4 - - - - 0.00008055 46.0