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Overview

ID MAG02391
Name MMD3_bin.30
Sample SMP0060
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class Thermodesulfovibrionia
Order Thermodesulfovibrionales
Family UBA6898
Genus Sulfobium
Species
Assembly information
Completeness (%) 87.65
Contamination (%) 3.41
GC content (%) 54.0
N50 (bp) 10,095
Genome size (bp) 2,561,143

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2445

Gene name Description KEGG GOs EC E-value Score Sequence
MMD3_k127_100003_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 5.859e-201 632.0
MMD3_k127_100003_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 415.0
MMD3_k127_100003_2 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 380.0
MMD3_k127_100003_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000003331 185.0
MMD3_k127_100003_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000002855 136.0
MMD3_k127_100003_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0042803,GO:0043021,GO:0043022,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046983,GO:0070037,GO:0070038,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.177 0.0000000000000000000000000000002377 127.0
MMD3_k127_100003_6 Tetratricopeptide repeat - - - 0.00000000000227 70.0
MMD3_k127_1029165_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.553e-203 640.0
MMD3_k127_1029165_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.393e-200 628.0
MMD3_k127_1029165_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 337.0
MMD3_k127_1029165_3 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000009823 238.0
MMD3_k127_1029165_4 PFAM MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004341 222.0
MMD3_k127_1029165_5 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000002721 200.0
MMD3_k127_1029165_6 AMP binding - - - 0.0000000000000000000000000000000000000000002986 162.0
MMD3_k127_1029165_7 Rubrerythrin - - - 0.0000000000000000000000000000007615 124.0
MMD3_k127_1029165_8 domain protein - - - 0.000000000000000000003583 109.0
MMD3_k127_1029165_9 Four helix bundle sensory module for signal transduction K03407 - 2.7.13.3 0.00000000000000001656 91.0
MMD3_k127_1045287_0 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005674 268.0
MMD3_k127_1045287_1 ATPase-coupled phosphate ion transmembrane transporter activity - - - 0.00000002055 63.0
MMD3_k127_1045287_2 peptidase - - - 0.0000007311 57.0
MMD3_k127_1045287_3 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000003874 53.0
MMD3_k127_1045287_4 Protein conserved in bacteria - - - 0.0004207 45.0
MMD3_k127_1047427_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 8.984e-268 836.0
MMD3_k127_1047427_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299,K22341 - 1.17.1.10,1.17.1.11,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 569.0
MMD3_k127_1047427_10 PHP-associated K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000001305 236.0
MMD3_k127_1047427_11 (Rhomboid) family K07059 - - 0.0000000000000000000000000000000000000000000000000000000000000002559 227.0
MMD3_k127_1047427_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000007689 205.0
MMD3_k127_1047427_13 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000006124 188.0
MMD3_k127_1047427_14 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000004351 181.0
MMD3_k127_1047427_15 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K18330 - 1.12.1.3 0.000000000000000000000000000000000000000000000008003 183.0
MMD3_k127_1047427_16 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000001842 176.0
MMD3_k127_1047427_17 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000004619 164.0
MMD3_k127_1047427_18 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000005288 162.0
MMD3_k127_1047427_19 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000217 150.0
MMD3_k127_1047427_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 568.0
MMD3_k127_1047427_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000002956 149.0
MMD3_k127_1047427_21 Ferredoxin K17992 - 1.12.1.3 0.00000000000000000000000000000000000003079 147.0
MMD3_k127_1047427_22 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000008765 145.0
MMD3_k127_1047427_23 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000003773 136.0
MMD3_k127_1047427_24 DRTGG domain - - - 0.00000000000000000000000000000004511 129.0
MMD3_k127_1047427_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000005035 127.0
MMD3_k127_1047427_26 cheY-homologous receiver domain - - - 0.00000000000000000000000000001861 129.0
MMD3_k127_1047427_27 PFAM DRTGG domain - - - 0.00000000000000000000000001778 112.0
MMD3_k127_1047427_28 cheY-homologous receiver domain - - - 0.00000000000000000000000006998 117.0
MMD3_k127_1047427_29 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000006704 49.0
MMD3_k127_1047427_3 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006955 526.0
MMD3_k127_1047427_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 519.0
MMD3_k127_1047427_5 response regulator K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 490.0
MMD3_k127_1047427_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 430.0
MMD3_k127_1047427_7 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 420.0
MMD3_k127_1047427_8 histidine kinase, HAMP K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 359.0
MMD3_k127_1047427_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000005131 256.0
MMD3_k127_1054959_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 573.0
MMD3_k127_1054959_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 539.0
MMD3_k127_1054959_2 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 483.0
MMD3_k127_1054959_3 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 351.0
MMD3_k127_1054959_4 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000000000000001774 231.0
MMD3_k127_1054959_5 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000003275 166.0
MMD3_k127_1054959_6 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000005453 166.0
MMD3_k127_1054959_8 - - - - 0.000000000000000001071 93.0
MMD3_k127_1054959_9 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000002342 79.0
MMD3_k127_1054993_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 4.823e-230 734.0
MMD3_k127_1054993_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000007822 248.0
MMD3_k127_1054993_2 ATP synthesis coupled proton transport K02109,K18682 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000001805 164.0
MMD3_k127_1054993_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000007411 156.0
MMD3_k127_1054993_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria K02109 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 - 0.0002773 49.0
MMD3_k127_1058872_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 4.981e-199 635.0
MMD3_k127_1058872_1 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 521.0
MMD3_k127_1058872_10 - - - - 0.00000000000000000000000000000001504 129.0
MMD3_k127_1058872_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 357.0
MMD3_k127_1058872_3 CO dehydrogenase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 304.0
MMD3_k127_1058872_4 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 292.0
MMD3_k127_1058872_5 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007406 284.0
MMD3_k127_1058872_6 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000004798 244.0
MMD3_k127_1058872_7 Actin K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000463 223.0
MMD3_k127_1058872_8 Pfam:TPM K08988 - - 0.000000000000000000000000000000000000000000000000000000000000003662 228.0
MMD3_k127_1058872_9 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000000000000000002386 154.0
MMD3_k127_1073633_0 Alpha-glucan water dikinase K08244 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009631,GO:0009941,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0031967,GO:0031975,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050521,GO:0050896,GO:0051704,GO:0051707,GO:0071704,GO:1901575 2.7.9.4 1.451e-240 777.0
MMD3_k127_1073633_1 PAS domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 430.0
MMD3_k127_1073633_2 superoxide reductase activity K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
MMD3_k127_1073633_3 Phosphoglucan, water dikinase K15535 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019200,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046777,GO:0046835,GO:0051752,GO:0071704,GO:1901564,GO:1901575 2.7.9.5 0.00000000000000000000000000000000000000000000000000000000000008636 234.0
MMD3_k127_1073633_4 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.00000000000000000000000000000000007132 143.0
MMD3_k127_1073633_5 iron ion binding - - - 0.00000000000000000000000000000007025 135.0
MMD3_k127_1073633_6 - - - - 0.000000000000000000000000000002982 130.0
MMD3_k127_1073633_7 Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000004134 128.0
MMD3_k127_1073633_8 Xylose isomerase domain protein TIM barrel - - - 0.00000003138 66.0
MMD3_k127_1090187_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.308e-270 848.0
MMD3_k127_1090187_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 2.753e-208 660.0
MMD3_k127_1090187_10 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000005718 211.0
MMD3_k127_1090187_11 Biotin/lipoate A/B protein ligase family K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.0000000000000000000000000000000000000000006929 167.0
MMD3_k127_1090187_12 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000000000001365 143.0
MMD3_k127_1090187_13 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000001376 116.0
MMD3_k127_1090187_14 Protein of unknown function (DUF2845) - - - 0.0000000000006365 74.0
MMD3_k127_1090187_15 Bacterial protein of unknown function (DUF922) - - - 0.0009196 50.0
MMD3_k127_1090187_2 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 431.0
MMD3_k127_1090187_3 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 333.0
MMD3_k127_1090187_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 329.0
MMD3_k127_1090187_5 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 326.0
MMD3_k127_1090187_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 296.0
MMD3_k127_1090187_7 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002046 258.0
MMD3_k127_1090187_8 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000002406 238.0
MMD3_k127_1090187_9 Mo-molybdopterin cofactor metabolic process K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000001865 232.0
MMD3_k127_1091770_0 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 437.0
MMD3_k127_1091770_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 357.0
MMD3_k127_1091770_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000057 74.0
MMD3_k127_1091770_3 integral membrane protein - - - 0.00000000001156 74.0
MMD3_k127_1092502_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 - 3.6.3.6 2.889e-294 924.0
MMD3_k127_1092502_1 SMART Elongator protein 3 MiaB NifB - - - 1.622e-216 681.0
MMD3_k127_1092502_10 Peptidase family M54 K06974 - - 0.00000000000000000000000000000000000000000000000001168 188.0
MMD3_k127_1092502_11 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000008673 172.0
MMD3_k127_1092502_12 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000206 134.0
MMD3_k127_1092502_14 Exonuclease VII small subunit K03602 - 3.1.11.6 0.000000000612 63.0
MMD3_k127_1092502_15 - - - - 0.000000049 57.0
MMD3_k127_1092502_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 449.0
MMD3_k127_1092502_3 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 394.0
MMD3_k127_1092502_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 392.0
MMD3_k127_1092502_5 3-hydroxyacyl-CoA dehydrogenase K00074,K01782 - 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 353.0
MMD3_k127_1092502_6 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 306.0
MMD3_k127_1092502_7 Dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 297.0
MMD3_k127_1092502_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006877 278.0
MMD3_k127_1092502_9 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000289 232.0
MMD3_k127_1101876_0 Extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 568.0
MMD3_k127_1101876_1 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 415.0
MMD3_k127_1101876_2 ABC transporter permease K02025 - - 0.00000000000000000000000000000000000000000000000000000000008451 211.0
MMD3_k127_1101876_3 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000002025 136.0
MMD3_k127_1112762_0 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 527.0
MMD3_k127_1112762_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 503.0
MMD3_k127_113026_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.953e-304 952.0
MMD3_k127_113026_1 Elongation factor SelB, winged helix K03833 - - 4.043e-207 661.0
MMD3_k127_113026_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000001183 134.0
MMD3_k127_113026_12 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000001036 74.0
MMD3_k127_113026_13 response regulator, receiver - - - 0.0006801 52.0
MMD3_k127_113026_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 521.0
MMD3_k127_113026_3 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 490.0
MMD3_k127_113026_4 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 454.0
MMD3_k127_113026_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 338.0
MMD3_k127_113026_6 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 288.0
MMD3_k127_113026_7 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000006025 194.0
MMD3_k127_113026_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000004903 188.0
MMD3_k127_113026_9 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000001195 164.0
MMD3_k127_1133951_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 560.0
MMD3_k127_1133951_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 496.0
MMD3_k127_1133951_10 COG0457 FOG TPR repeat - - - 0.000004526 56.0
MMD3_k127_1133951_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007099 258.0
MMD3_k127_1133951_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000008172 209.0
MMD3_k127_1133951_4 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K00564,K15460 - 2.1.1.172,2.1.1.223 0.0000000000000000000000000000000000000000000000000000000009089 211.0
MMD3_k127_1133951_5 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000006065 198.0
MMD3_k127_1133951_6 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.00000000000000000000000000000000000000000000000000001274 196.0
MMD3_k127_1133951_7 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000008604 165.0
MMD3_k127_1133951_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000002035 88.0
MMD3_k127_1133951_9 Lactonase, 7-bladed beta-propeller - - - 0.000000139 63.0
MMD3_k127_114728_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1200.0
MMD3_k127_114728_1 5-formyltetrahydrofolate cyclo-ligase activity K07137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673 600.0
MMD3_k127_114728_10 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 297.0
MMD3_k127_114728_11 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 285.0
MMD3_k127_114728_12 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002911 280.0
MMD3_k127_114728_13 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000195 273.0
MMD3_k127_114728_14 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000008355 263.0
MMD3_k127_114728_15 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002119 274.0
MMD3_k127_114728_16 Family 5 K02035,K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000002564 248.0
MMD3_k127_114728_17 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000001162 222.0
MMD3_k127_114728_18 queuosine biosynthetic process K03470,K09765 - 1.17.99.6,3.1.26.4 0.00000000000000000000000000000000000000000000000000000000003124 210.0
MMD3_k127_114728_19 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000203 184.0
MMD3_k127_114728_2 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 584.0
MMD3_k127_114728_20 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000001329 152.0
MMD3_k127_114728_21 sensor histidine kinase - - - 0.00000000000000000000000000001534 137.0
MMD3_k127_114728_22 Outer membrane lipoprotein Slp family K07285 - - 0.000000000000000000000000001648 119.0
MMD3_k127_114728_23 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000005366 115.0
MMD3_k127_114728_24 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000009323 116.0
MMD3_k127_114728_26 Protein of unknown function (DUF2905) - - - 0.00000000000000000001047 93.0
MMD3_k127_114728_27 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000002057 80.0
MMD3_k127_114728_28 Diguanylate cyclase - - - 0.0000000000249 72.0
MMD3_k127_114728_29 PFAM Sporulation related domain - - - 0.0003445 51.0
MMD3_k127_114728_3 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 501.0
MMD3_k127_114728_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 447.0
MMD3_k127_114728_5 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 433.0
MMD3_k127_114728_6 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 376.0
MMD3_k127_114728_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 349.0
MMD3_k127_114728_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 322.0
MMD3_k127_114728_9 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 299.0
MMD3_k127_1196469_0 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.000000000000000000000000000000000000001094 154.0
MMD3_k127_1196469_1 PilZ domain - - - 0.0000000000000000000002201 106.0
MMD3_k127_1196469_2 Rubrerythrin - - - 0.000000000000000001716 91.0
MMD3_k127_1196469_3 radical SAM domain protein - - - 0.0000000000001612 73.0
MMD3_k127_1196469_5 - - - - 0.000001166 50.0
MMD3_k127_1217924_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 588.0
MMD3_k127_1217924_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000004637 125.0
MMD3_k127_1217924_2 Glycosyl transferase 4-like - - - 0.0001322 50.0
MMD3_k127_1232609_0 GTP-binding protein TypA K06207 - - 6.764e-263 822.0
MMD3_k127_1232609_1 Domain of unknown function (DUF1957) K16149 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 579.0
MMD3_k127_1232609_10 dihydrofolate reductase activity K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000000007697 221.0
MMD3_k127_1232609_11 - - - - 0.0000000000000000000000000000000000000000000000000003471 189.0
MMD3_k127_1232609_12 His Kinase A (phosphoacceptor) domain K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000001288 188.0
MMD3_k127_1232609_14 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000001927 175.0
MMD3_k127_1232609_15 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000006054 155.0
MMD3_k127_1232609_16 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000001071 157.0
MMD3_k127_1232609_17 permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000008849 150.0
MMD3_k127_1232609_18 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000003831 127.0
MMD3_k127_1232609_19 4Fe-4S single cluster domain K06937 - - 0.0000000000000000000003764 108.0
MMD3_k127_1232609_2 transmembrane transporter activity K13021 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 502.0
MMD3_k127_1232609_20 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.0000000000000000000007033 103.0
MMD3_k127_1232609_21 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000005429 93.0
MMD3_k127_1232609_23 serine threonine protein kinase - - - 0.000001224 55.0
MMD3_k127_1232609_3 response regulator K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 421.0
MMD3_k127_1232609_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 417.0
MMD3_k127_1232609_5 Transcriptional regulator K11921,K19338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 385.0
MMD3_k127_1232609_6 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 336.0
MMD3_k127_1232609_7 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 267.0
MMD3_k127_1232609_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826,K02619 - 2.6.1.42,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000002735 259.0
MMD3_k127_1232609_9 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000001031 242.0
MMD3_k127_1243775_0 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000126 179.0
MMD3_k127_1243775_1 Type II secretion system (T2SS), protein M subtype b - - - 0.00000000005698 71.0
MMD3_k127_1243775_2 fimbrial assembly K02461 - - 0.0000000004618 73.0
MMD3_k127_1243775_3 Prokaryotic N-terminal methylation motif K02459 - - 0.000002617 57.0
MMD3_k127_1243775_4 - K02463 - - 0.0006346 50.0
MMD3_k127_1255265_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 7.926e-205 651.0
MMD3_k127_1255265_1 Protein of unknown function (DUF1646) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 306.0
MMD3_k127_1255265_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001744 252.0
MMD3_k127_1255265_3 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0000000000000000000000000000000000000000000000004884 184.0
MMD3_k127_1255265_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000001047 130.0
MMD3_k127_1255265_5 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000003204 60.0
MMD3_k127_1255265_6 Oxidoreductase FAD-binding domain - - - 0.0002615 48.0
MMD3_k127_1273476_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 6.549e-227 721.0
MMD3_k127_1273476_1 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.00000000000000000000000000000000001786 140.0
MMD3_k127_1273476_2 PFAM Nitrate reductase gamma subunit - - - 0.0000000000000000000000001807 115.0
MMD3_k127_1273476_3 - - - - 0.000000000000000001569 91.0
MMD3_k127_1273476_4 FR47-like protein - - - 0.0000000000000003571 81.0
MMD3_k127_1283676_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.982e-287 891.0
MMD3_k127_1283676_1 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000565 274.0
MMD3_k127_1283676_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000001769 211.0
MMD3_k127_1286467_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 491.0
MMD3_k127_1286467_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 474.0
MMD3_k127_1286467_2 DHHA2 domain K15986 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 387.0
MMD3_k127_1286467_3 - - - - 0.00000000000000000000000001707 121.0
MMD3_k127_1286467_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000009687 107.0
MMD3_k127_1286467_5 toxin-antitoxin pair type II binding - - - 0.0000000000000000001501 89.0
MMD3_k127_1286467_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000007723 85.0
MMD3_k127_1286467_7 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000001119 80.0
MMD3_k127_1298684_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 7.862e-254 846.0
MMD3_k127_1298684_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 551.0
MMD3_k127_1309474_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 499.0
MMD3_k127_1309474_1 calcium, potassium:sodium antiporter activity K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 365.0
MMD3_k127_1309474_2 AMP binding - - - 0.00000000000000000000000000000000000003078 155.0
MMD3_k127_1309474_3 Thiamine-binding protein - - - 0.0000000000000000000000000000000001136 135.0
MMD3_k127_1309474_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000004628 127.0
MMD3_k127_1309474_5 - - - - 0.0000000000000001544 83.0
MMD3_k127_1309474_6 CYTH domain K05873 - 4.6.1.1 0.000000000000005465 81.0
MMD3_k127_1326587_0 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 506.0
MMD3_k127_1326587_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 442.0
MMD3_k127_1326587_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002187 278.0
MMD3_k127_1326587_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000007313 229.0
MMD3_k127_1326587_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000001515 78.0
MMD3_k127_1335167_0 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 588.0
MMD3_k127_1335167_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 406.0
MMD3_k127_1335167_2 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003433 281.0
MMD3_k127_1335167_3 PFAM CMP dCMP deaminase zinc-binding K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000007387 242.0
MMD3_k127_1335167_4 PFAM Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000000000000000004394 194.0
MMD3_k127_1335167_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000006098 146.0
MMD3_k127_1335167_6 Cytochrome c - - - 0.0000000000000000000000000000000001756 145.0
MMD3_k127_1335167_7 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.00000000000000000000000002155 121.0
MMD3_k127_1335167_8 histidine kinase A domain protein - - - 0.000000000000000000005273 93.0
MMD3_k127_1340831_0 Aconitase C-terminal domain K01681 - 4.2.1.3 3.113e-299 929.0
MMD3_k127_1340831_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 544.0
MMD3_k127_1340831_10 PFAM Bacterial regulatory proteins, crp family K01420 - - 0.0008917 49.0
MMD3_k127_1340831_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 447.0
MMD3_k127_1340831_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 338.0
MMD3_k127_1340831_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001181 248.0
MMD3_k127_1340831_5 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000003636 230.0
MMD3_k127_1340831_6 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000006213 201.0
MMD3_k127_1340831_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000003075 52.0
MMD3_k127_1358324_0 PFAM Type II secretion system protein E K02454 - - 6.266e-199 633.0
MMD3_k127_1358324_1 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 543.0
MMD3_k127_1358324_2 protein transport across the cell outer membrane K02452,K02463 - - 0.0000000000000000000000000000000000000002459 162.0
MMD3_k127_1360238_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 4.87e-234 730.0
MMD3_k127_1360238_1 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006846 269.0
MMD3_k127_1360238_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002783 273.0
MMD3_k127_1360238_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000000000000000000000000000000000000009625 217.0
MMD3_k127_1360238_4 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000001295 78.0
MMD3_k127_1364753_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 468.0
MMD3_k127_1364753_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 333.0
MMD3_k127_1364753_2 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008396 284.0
MMD3_k127_1364753_3 Signal transduction response regulator, receiver domain - - - 0.0000000000000000000000000000000000000000000000000009356 192.0
MMD3_k127_1364753_4 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000007729 163.0
MMD3_k127_1364753_5 YceI-like domain - - - 0.000000000000000000000000000000000000000000131 164.0
MMD3_k127_1364753_6 radical SAM domain protein - - - 0.0000000000000000000000000002077 125.0
MMD3_k127_1364753_7 Histidine kinase K02660,K11525 - - 0.0000000000000000000000001531 116.0
MMD3_k127_1364753_8 Belongs to the glycosyl hydrolase 26 family - - - 0.000000000006178 78.0
MMD3_k127_1364753_9 DSBA-like thioredoxin domain - - - 0.000000784 53.0
MMD3_k127_1368261_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 4.615e-320 998.0
MMD3_k127_1368261_1 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 440.0
MMD3_k127_1368261_2 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 392.0
MMD3_k127_1368261_3 PFAM HhH-GPD superfamily base excision DNA repair protein K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000338 258.0
MMD3_k127_1368261_4 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000009094 167.0
MMD3_k127_1368261_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000005361 167.0
MMD3_k127_1368261_6 translation release factor activity - - - 0.00000000000000000000000000000000000000002601 156.0
MMD3_k127_1403555_0 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005972 272.0
MMD3_k127_1403555_1 related to short-chain alcohol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000117 247.0
MMD3_k127_1403555_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000005702 214.0
MMD3_k127_1403555_3 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.00000000000000000000000000000000000000003264 158.0
MMD3_k127_1403555_4 Protein of unknown function DUF134 - - - 0.000000000000000000000000003883 113.0
MMD3_k127_1403555_5 Fibronectin type 3 domain K20276 - - 0.000000000006871 74.0
MMD3_k127_1403555_6 - - - - 0.00000000002429 72.0
MMD3_k127_1421084_0 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 553.0
MMD3_k127_1421084_1 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 464.0
MMD3_k127_1421084_10 Belongs to the UPF0324 family - - - 0.000000000000000000000000006219 122.0
MMD3_k127_1421084_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000009663 254.0
MMD3_k127_1421084_3 DivIVA protein K04074 - - 0.00000000000000000000000000000000000000000000000000000000000000204 220.0
MMD3_k127_1421084_4 HD domain - - - 0.000000000000000000000000000000000000000000000000000000001257 214.0
MMD3_k127_1421084_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000001353 210.0
MMD3_k127_1421084_6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.00000000000000000000000000000000000002372 144.0
MMD3_k127_1421084_7 YGGT family K02221 - - 0.00000000000000000000000000000007957 128.0
MMD3_k127_1421084_8 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000002219 118.0
MMD3_k127_1421084_9 PFAM response regulator receiver - - - 0.0000000000000000000000000004987 117.0
MMD3_k127_1426053_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000002023 182.0
MMD3_k127_1426053_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000003797 152.0
MMD3_k127_1426053_2 - - - - 0.000000001436 68.0
MMD3_k127_1426053_3 Protein conserved in bacteria - - - 0.0008731 44.0
MMD3_k127_1436207_0 CoA binding domain K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008446 520.0
MMD3_k127_1436207_1 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 513.0
MMD3_k127_1436207_2 e3 binding domain K00627 - 2.3.1.12 0.0000000000000000000006102 95.0
MMD3_k127_1442454_0 Histidinol phosphatase and related hydrolases of the PHP family - - - 1.823e-272 851.0
MMD3_k127_1442454_1 beta-glucosidase activity K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 602.0
MMD3_k127_1442454_2 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008988 282.0
MMD3_k127_1442454_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 267.0
MMD3_k127_1444323_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 512.0
MMD3_k127_1444323_1 May be involved in recombinational repair of damaged DNA K03631,K13582 GO:0000724,GO:0000725,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009295,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 396.0
MMD3_k127_1444323_10 CBS domain K04767 - - 0.000000000125 68.0
MMD3_k127_1444323_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01761 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 364.0
MMD3_k127_1444323_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 334.0
MMD3_k127_1444323_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 - 2.1.1.200,3.5.1.19,6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000002017 216.0
MMD3_k127_1444323_5 - - - - 0.00000000000000000000000000000000000000000000803 168.0
MMD3_k127_1444323_6 photosynthesis - - - 0.000000000000000000000000000000000002812 143.0
MMD3_k127_1444323_7 EamA-like transporter family - - - 0.0000000000000000000000000000000002644 143.0
MMD3_k127_1444323_8 - - - - 0.0000000000000000000000000000000006351 135.0
MMD3_k127_1444323_9 PFAM 4Fe-4S K00176 - 1.2.7.3 0.00000000000000000003794 93.0
MMD3_k127_1453845_0 Conserved region in glutamate synthase - - - 2.923e-270 839.0
MMD3_k127_1453845_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 523.0
MMD3_k127_1453845_10 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.000000000000000000000000000000000000002775 157.0
MMD3_k127_1453845_11 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000002965 119.0
MMD3_k127_1453845_2 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 498.0
MMD3_k127_1453845_3 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 378.0
MMD3_k127_1453845_4 Ribonuclease R winged-helix domain K09720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 380.0
MMD3_k127_1453845_5 Competence protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 363.0
MMD3_k127_1453845_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 321.0
MMD3_k127_1453845_7 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.00000000000000000000000000000000000000000000000002561 180.0
MMD3_k127_1453845_8 YbbR-like protein - - - 0.000000000000000000000000000000000000000000008231 173.0
MMD3_k127_1453845_9 L-glutamate biosynthetic process - - - 0.000000000000000000000000000000000000000006655 158.0
MMD3_k127_1454597_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 1.872e-291 904.0
MMD3_k127_1454597_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 2.012e-202 640.0
MMD3_k127_1454597_10 adenylate kinase activity K00939,K01939 - 2.7.4.3,6.3.4.4 0.00000000000000000000000000000000000000000000000002455 186.0
MMD3_k127_1454597_11 GAF domain - - - 0.0000000000000000000000000000000000000000000000002837 190.0
MMD3_k127_1454597_12 SMART helix-turn-helix domain protein K15539 - - 0.00000000000000000000003164 108.0
MMD3_k127_1454597_13 thiamine diphosphate biosynthetic process K03154 - - 0.0000000000005034 71.0
MMD3_k127_1454597_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 576.0
MMD3_k127_1454597_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 466.0
MMD3_k127_1454597_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 437.0
MMD3_k127_1454597_5 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 398.0
MMD3_k127_1454597_6 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 391.0
MMD3_k127_1454597_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 354.0
MMD3_k127_1454597_8 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007025 259.0
MMD3_k127_1454597_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000001628 206.0
MMD3_k127_1455898_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 491.0
MMD3_k127_1455898_1 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 322.0
MMD3_k127_1460927_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1422.0
MMD3_k127_1460927_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 575.0
MMD3_k127_1460927_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 473.0
MMD3_k127_1460927_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000001189 232.0
MMD3_k127_1460927_4 - - - - 0.000000000000000000000000000000000000000000000000000002809 195.0
MMD3_k127_1466692_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1151.0
MMD3_k127_1466692_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 544.0
MMD3_k127_1466692_10 sulfur carrier activity - - - 0.000000000000000000549 89.0
MMD3_k127_1466692_11 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000008248 75.0
MMD3_k127_1466692_2 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 373.0
MMD3_k127_1466692_3 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 369.0
MMD3_k127_1466692_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 326.0
MMD3_k127_1466692_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000429 230.0
MMD3_k127_1466692_6 PFAM CBS domain - - - 0.000000000000000000000000000000000000000009832 158.0
MMD3_k127_1466692_7 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000000000002156 113.0
MMD3_k127_1466692_8 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000002298 114.0
MMD3_k127_1466692_9 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000006794 112.0
MMD3_k127_1468136_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 583.0
MMD3_k127_1468136_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 364.0
MMD3_k127_1468136_10 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000001423 198.0
MMD3_k127_1468136_11 Thioredoxin-like domain K03671 - - 0.00000000000000000000000000000000000000000000000001475 182.0
MMD3_k127_1468136_12 PFAM iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000007104 185.0
MMD3_k127_1468136_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000001889 144.0
MMD3_k127_1468136_14 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000000003267 130.0
MMD3_k127_1468136_15 cell redox homeostasis K02199 - - 0.000000000000000000000000000000007169 134.0
MMD3_k127_1468136_16 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000005728 121.0
MMD3_k127_1468136_17 diguanylate cyclase - - - 0.000000000000000000000000105 108.0
MMD3_k127_1468136_18 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000006407 107.0
MMD3_k127_1468136_19 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000002207 85.0
MMD3_k127_1468136_2 Family 5 K02035,K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 323.0
MMD3_k127_1468136_20 protein secretion K03116,K03117 - - 0.00000000000002182 76.0
MMD3_k127_1468136_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002486 283.0
MMD3_k127_1468136_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002381 277.0
MMD3_k127_1468136_5 ABC transporter permease K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004032 265.0
MMD3_k127_1468136_6 PFAM binding-protein-dependent transport systems inner membrane component K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000001044 242.0
MMD3_k127_1468136_7 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000001652 227.0
MMD3_k127_1468136_8 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000001629 220.0
MMD3_k127_1468379_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 605.0
MMD3_k127_1468379_1 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000001188 237.0
MMD3_k127_1468379_2 Protein of unknown function DUF89 K09116 - - 0.00000000000000000000000000000000000000000000000000000000000000007976 232.0
MMD3_k127_1468379_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000463 200.0
MMD3_k127_1468379_4 RNA recognition motif - - - 0.0000000000000000000003366 100.0
MMD3_k127_1469914_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1108.0
MMD3_k127_1482176_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002685 268.0
MMD3_k127_1482176_1 DEAD/H associated K03724 - - 0.0000000000000001748 80.0
MMD3_k127_1491164_0 alginic acid biosynthetic process - - - 7.314e-269 852.0
MMD3_k127_1491164_1 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 7.266e-198 627.0
MMD3_k127_1491164_2 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 329.0
MMD3_k127_1491164_3 cytochrome c biogenesis protein K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 310.0
MMD3_k127_1491164_5 glycine betaine transport K05845,K05846 - - 0.000000000000000000000000000000000000000000003414 170.0
MMD3_k127_1491164_7 Sulphur transport K07112 - - 0.00000000000000000003176 94.0
MMD3_k127_1491164_8 SMART Elongator protein 3 MiaB NifB - - - 0.000000000505 61.0
MMD3_k127_1491164_9 peptidyl-tyrosine sulfation - - - 0.000000005518 64.0
MMD3_k127_1514728_0 Anthranilate synthase component I K01657,K01665,K03342,K13950 - 2.6.1.85,4.1.3.27,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 455.0
MMD3_k127_1514728_1 Belongs to the helicase family. UvrD subfamily - - - 0.00000000000000000000000000000000153 134.0
MMD3_k127_1514728_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000002595 95.0
MMD3_k127_1514728_3 Domain of unknown function (DUF4382) - - - 0.000000000000000002954 95.0
MMD3_k127_1517658_0 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 486.0
MMD3_k127_1517658_1 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000007316 197.0
MMD3_k127_1517658_2 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00000000000000000000000000000000003884 139.0
MMD3_k127_1517658_4 response regulator - - - 0.0000007245 51.0
MMD3_k127_1568014_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000001218 210.0
MMD3_k127_1568014_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000007183 201.0
MMD3_k127_1568014_2 Glycosyl transferases group 1 - - - 0.000402 50.0
MMD3_k127_1568014_3 Transport permease protein K01992,K09690 - - 0.0004362 43.0
MMD3_k127_158039_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 2.403e-262 820.0
MMD3_k127_158039_1 Squalene-hopene cyclase C-terminal domain K01852,K06045 - 4.2.1.129,5.4.99.17,5.4.99.7 2.616e-243 768.0
MMD3_k127_158039_10 Male sterility protein K00091,K19997 - 1.1.1.219,5.1.3.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 399.0
MMD3_k127_158039_11 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 389.0
MMD3_k127_158039_12 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 323.0
MMD3_k127_158039_13 COG0644 Dehydrogenases (flavoproteins) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 291.0
MMD3_k127_158039_14 Pfam:DUF422 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001125 273.0
MMD3_k127_158039_15 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000007969 226.0
MMD3_k127_158039_16 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000003558 231.0
MMD3_k127_158039_17 - - - - 0.00000000000000000000000000000000000000000000000000000000001001 218.0
MMD3_k127_158039_18 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000002082 202.0
MMD3_k127_158039_19 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000385 194.0
MMD3_k127_158039_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 5.771e-209 678.0
MMD3_k127_158039_20 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000000002492 190.0
MMD3_k127_158039_21 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000003574 175.0
MMD3_k127_158039_22 NUDIX domain K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000009768 174.0
MMD3_k127_158039_23 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000001576 167.0
MMD3_k127_158039_24 Protein of unknown function DUF116 - - - 0.000000000000000000000000000000000000000008454 168.0
MMD3_k127_158039_25 MlaC protein K07323 - - 0.0000000000000000000000000000000000000319 151.0
MMD3_k127_158039_26 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000007652 150.0
MMD3_k127_158039_27 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000004295 149.0
MMD3_k127_158039_28 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000000008497 134.0
MMD3_k127_158039_29 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000004165 138.0
MMD3_k127_158039_3 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 564.0
MMD3_k127_158039_30 RNA recognition motif - - - 0.0000000000000000000000000003215 118.0
MMD3_k127_158039_31 PFAM purine or other phosphorylase family 1 K01243 - 3.2.2.9 0.000000000000000004227 95.0
MMD3_k127_158039_32 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000001497 77.0
MMD3_k127_158039_33 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000003877 74.0
MMD3_k127_158039_34 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000005259 76.0
MMD3_k127_158039_35 EamA-like transporter family - - - 0.0000000006541 64.0
MMD3_k127_158039_36 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000001363 64.0
MMD3_k127_158039_37 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000004642 64.0
MMD3_k127_158039_4 TIGRFAM hopanoid biosynthesis associated RND transporter like protein HpnN K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 567.0
MMD3_k127_158039_5 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 436.0
MMD3_k127_158039_6 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 439.0
MMD3_k127_158039_7 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 412.0
MMD3_k127_158039_8 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 413.0
MMD3_k127_158039_9 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 412.0
MMD3_k127_1586747_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 357.0
MMD3_k127_1586747_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000005038 193.0
MMD3_k127_1586747_2 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000000001765 136.0
MMD3_k127_1586747_3 rubredoxin - - - 0.0000000000000000000000005387 104.0
MMD3_k127_1586747_4 NusG domain II K00805 - 2.5.1.30 0.000000000000000003099 89.0
MMD3_k127_1586747_5 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000009465 81.0
MMD3_k127_1605774_0 General secretion pathway protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 302.0
MMD3_k127_164058_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 3.934e-314 985.0
MMD3_k127_164058_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 503.0
MMD3_k127_164058_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008004 442.0
MMD3_k127_164058_3 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000002312 145.0
MMD3_k127_164058_4 Modulates RecA activity K03565 - - 0.00000000000002437 79.0
MMD3_k127_1682699_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1073.0
MMD3_k127_1682699_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 4.571e-196 621.0
MMD3_k127_1682699_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 414.0
MMD3_k127_1682699_3 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 351.0
MMD3_k127_1682699_4 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 333.0
MMD3_k127_1682699_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 336.0
MMD3_k127_1682699_6 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003354 258.0
MMD3_k127_1682699_7 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000004278 169.0
MMD3_k127_1682699_8 PFAM response regulator receiver K02483 - - 0.000000000000000000000000000000000000001889 149.0
MMD3_k127_1688079_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 2.036e-249 795.0
MMD3_k127_1688079_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000007023 66.0
MMD3_k127_1726505_0 C-terminal domain of tail specific protease (DUF3340) K03797 - 3.4.21.102 6.786e-224 715.0
MMD3_k127_1726505_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 606.0
MMD3_k127_1726505_2 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 480.0
MMD3_k127_1726505_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 458.0
MMD3_k127_1726505_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 428.0
MMD3_k127_1726505_5 HlyD membrane-fusion protein of T1SS K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 370.0
MMD3_k127_1726505_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 304.0
MMD3_k127_1726505_7 transcriptional regulator - GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000006744 231.0
MMD3_k127_1726505_8 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000002719 153.0
MMD3_k127_1726505_9 Sugar (and other) transporter K03446 - - 0.000000000000000000000000000000000001139 139.0
MMD3_k127_1767721_0 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007492 389.0
MMD3_k127_1767721_1 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 327.0
MMD3_k127_1830714_0 glycolate transport K03307,K14393 GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006846,GO:0006847,GO:0006855,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015123,GO:0015238,GO:0015318,GO:0015654,GO:0015698,GO:0015710,GO:0015711,GO:0015718,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035433,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 413.0
MMD3_k127_1830714_1 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 313.0
MMD3_k127_1830714_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000003544 146.0
MMD3_k127_1830714_3 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000001726 117.0
MMD3_k127_1859095_0 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 452.0
MMD3_k127_1859095_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001722 251.0
MMD3_k127_1859095_10 - - - - 0.0004003 48.0
MMD3_k127_1859095_2 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000005437 231.0
MMD3_k127_1859095_4 Glycosyl hydrolases family 43 - - - 0.0000000000000000000000000000000000000000000000007263 187.0
MMD3_k127_1859095_5 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000004098 170.0
MMD3_k127_1859095_6 nucleotide phosphatase activity, acting on free nucleotides K00943,K02013,K02017,K03574,K03752,K06928 - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 0.000000000000000000000000000000000006156 143.0
MMD3_k127_1859095_7 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.00000000000000001649 88.0
MMD3_k127_1859095_8 PFAM Transglycosylase-associated protein - - - 0.00000000001114 69.0
MMD3_k127_1859095_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000002326 55.0
MMD3_k127_1859863_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 431.0
MMD3_k127_1859863_1 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 426.0
MMD3_k127_1859863_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 422.0
MMD3_k127_1859863_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001713 263.0
MMD3_k127_1859863_4 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004515 254.0
MMD3_k127_186952_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 550.0
MMD3_k127_186952_1 Domain of unknown function (DUF4388) K03412 - 3.1.1.61,3.5.1.44 0.000003318 52.0
MMD3_k127_1890623_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1149.0
MMD3_k127_1890623_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 2.102e-195 622.0
MMD3_k127_1890623_10 Protein of unknown function (DUF2934) - - - 0.00000001718 59.0
MMD3_k127_1890623_2 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 426.0
MMD3_k127_1890623_3 Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 366.0
MMD3_k127_1890623_4 Methionine synthase, cobalamin (vitamin B12)-binding module, cap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 321.0
MMD3_k127_1890623_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000001195 235.0
MMD3_k127_1890623_6 TIGRFAM iron-sulfur cluster binding protein - - - 0.0000000000000000000000000000000000000000000000002303 183.0
MMD3_k127_1890623_7 PFAM Carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000000000000008887 158.0
MMD3_k127_1890623_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.00000000000000000008195 91.0
MMD3_k127_1890623_9 OsmC-like protein - - - 0.000000000000000001835 92.0
MMD3_k127_1913040_0 MMPL family K03296 - - 0.0 1095.0
MMD3_k127_1913040_1 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 411.0
MMD3_k127_1913040_2 Biotin-lipoyl like K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 391.0
MMD3_k127_1913040_3 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 342.0
MMD3_k127_1913040_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003579 284.0
MMD3_k127_1913040_5 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000000188 205.0
MMD3_k127_1913040_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000251 138.0
MMD3_k127_1913040_7 Outer membrane efflux protein - - - 0.000000000000000000003244 99.0
MMD3_k127_1913040_8 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000004199 100.0
MMD3_k127_1928053_0 glycosyl transferase family 2 K21349 - 2.4.1.268 4.646e-200 632.0
MMD3_k127_1928053_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 590.0
MMD3_k127_1928053_2 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 313.0
MMD3_k127_1928053_3 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003914 277.0
MMD3_k127_1928053_4 Mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004361 251.0
MMD3_k127_1928053_5 transmembrane transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000002259 242.0
MMD3_k127_1928053_6 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000001949 107.0
MMD3_k127_1937838_0 PFAM Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 534.0
MMD3_k127_1937838_1 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 497.0
MMD3_k127_1937838_2 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 376.0
MMD3_k127_1937838_3 belongs to the bacterial solute-binding protein 3 family K02030,K09969,K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 348.0
MMD3_k127_1937838_4 Hydrophobe amphiphile Efflux-1 (HAE1) family K03296,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001082 246.0
MMD3_k127_1937838_5 PFAM Aminotransferase class-III - GO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0048037,GO:0070279,GO:0070280,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000335 226.0
MMD3_k127_1937838_6 Antibiotic biosynthesis monooxygenase - - - 0.0000000000001372 77.0
MMD3_k127_1946412_0 ATP-dependent DNA helicase activity K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 491.0
MMD3_k127_1946412_1 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 486.0
MMD3_k127_1946412_2 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 437.0
MMD3_k127_1946412_3 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 339.0
MMD3_k127_1946412_4 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005752 248.0
MMD3_k127_1946412_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000005403 136.0
MMD3_k127_1946412_6 iron-sulfur cluster assembly - - - 0.00000000000000000000000002146 109.0
MMD3_k127_1946412_7 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.000000000000000000000004912 104.0
MMD3_k127_1946412_8 Belongs to the Fur family K03711,K09825 - - 0.00000000000004385 73.0
MMD3_k127_1946412_9 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.00000000000549 73.0
MMD3_k127_1955986_0 ABC transporter K06020 - 3.6.3.25 3.471e-311 959.0
MMD3_k127_1965844_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 567.0
MMD3_k127_1965844_1 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 537.0
MMD3_k127_1965844_10 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000002553 156.0
MMD3_k127_1965844_11 Two component signalling adaptor domain K03408 - - 0.0000000000000000000008987 104.0
MMD3_k127_1965844_13 UPF0182 protein K09118 - - 0.00003569 48.0
MMD3_k127_1965844_14 YMGG-like Gly-zipper - - - 0.0001067 52.0
MMD3_k127_1965844_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 520.0
MMD3_k127_1965844_3 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 334.0
MMD3_k127_1965844_4 Pfam:Arch_ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 296.0
MMD3_k127_1965844_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000105 313.0
MMD3_k127_1965844_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001427 273.0
MMD3_k127_1965844_7 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000001801 218.0
MMD3_k127_1965844_8 PFAM response regulator receiver K03413 - - 0.000000000000000000000000000000000000001099 151.0
MMD3_k127_1965844_9 regulator, PATAN and FRGAF domain-containing - - - 0.00000000000000000000000000000000000000111 162.0
MMD3_k127_1983686_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 589.0
MMD3_k127_1983686_1 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 592.0
MMD3_k127_1983686_10 DsrE/DsrF/DrsH-like family - - - 0.000000009192 57.0
MMD3_k127_1983686_11 - - - - 0.0009153 44.0
MMD3_k127_1983686_2 Histidine kinase K07642,K18143 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 395.0
MMD3_k127_1983686_3 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 377.0
MMD3_k127_1983686_4 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 314.0
MMD3_k127_1983686_5 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005297 269.0
MMD3_k127_1983686_6 response regulator K02667 - - 0.00000000000000000000000000000000000000001889 158.0
MMD3_k127_1983686_7 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000324 155.0
MMD3_k127_1983686_8 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000007993 136.0
MMD3_k127_1983686_9 - - - - 0.0000000000004651 76.0
MMD3_k127_1983825_0 DNA polymerase K02347 - - 1.064e-210 669.0
MMD3_k127_1983825_1 Sigma-54 interaction domain K02481,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 447.0
MMD3_k127_1983825_10 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000001086 95.0
MMD3_k127_1983825_11 DsrE/DsrF/DrsH-like family - - - 0.000000009192 57.0
MMD3_k127_1983825_2 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 365.0
MMD3_k127_1983825_3 curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 307.0
MMD3_k127_1983825_4 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000284 287.0
MMD3_k127_1983825_5 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
MMD3_k127_1983825_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000003651 258.0
MMD3_k127_1983825_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000003826 233.0
MMD3_k127_1983825_8 Dihydroneopterin aldolase - - - 0.000000000000000000000000000000000008751 143.0
MMD3_k127_1983825_9 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.000000000000000000000000000009562 121.0
MMD3_k127_1989297_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 609.0
MMD3_k127_1989297_1 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001648 205.0
MMD3_k127_1989297_2 membrane protein of uknown function UCP014873 - - - 0.000000000000000000000000000000000000000000000000000008253 194.0
MMD3_k127_1989297_3 membrane protein (DUF2127) - - - 0.00000000000000000000000000000000000000001799 163.0
MMD3_k127_1989297_4 Universal stress protein family - - - 0.0000000000000007342 85.0
MMD3_k127_1992791_0 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 322.0
MMD3_k127_1992791_1 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000001686 243.0
MMD3_k127_1992791_2 ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000009464 236.0
MMD3_k127_1992791_3 ABC-type Mn2 Zn2 transport system, permease component K09816,K09819,K19976 - - 0.00000000000000000000000000000000000000000000000000000000000122 220.0
MMD3_k127_1992791_4 Domain of unknown function (DUF1992) - - - 0.0000000000001816 70.0
MMD3_k127_2013279_0 Belongs to the CarB family K01955 - 6.3.5.5 2.28e-291 908.0
MMD3_k127_2013279_1 Phosphoglycerate kinase K00927 - 2.7.2.3 3.606e-198 625.0
MMD3_k127_2013279_2 PFAM phosphofructokinase K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 546.0
MMD3_k127_2013279_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000001534 241.0
MMD3_k127_2013279_4 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000003507 197.0
MMD3_k127_2013279_5 MGS-like domain - - - 0.0000000000000000000000000000000000000000000000000044 189.0
MMD3_k127_2013279_6 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000001807 148.0
MMD3_k127_2013279_7 - - - - 0.000000000000000000009495 96.0
MMD3_k127_2019837_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336,K05299,K06441 - 1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 599.0
MMD3_k127_2019837_1 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 434.0
MMD3_k127_2019837_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain - - - 0.00000000000000000000000000000000000000000000000002818 189.0
MMD3_k127_2019837_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000005871 164.0
MMD3_k127_2019837_4 formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.00000033 57.0
MMD3_k127_2019837_5 Tetratricopeptide repeat - - - 0.00004945 50.0
MMD3_k127_20295_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 614.0
MMD3_k127_20295_1 PFAM Radical SAM domain protein K22227 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 590.0
MMD3_k127_20295_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 452.0
MMD3_k127_20295_3 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000007257 226.0
MMD3_k127_20295_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000003035 148.0
MMD3_k127_20295_5 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000001187 70.0
MMD3_k127_2033845_0 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.739e-206 661.0
MMD3_k127_2033845_1 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.00000000000000000000000000000000000000000000002192 173.0
MMD3_k127_2033845_2 Nitrogen regulatory protein P-II K02589 - - 0.0000000114 57.0
MMD3_k127_204648_0 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 290.0
MMD3_k127_204648_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000002684 190.0
MMD3_k127_204648_2 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000004271 173.0
MMD3_k127_204648_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000005542 163.0
MMD3_k127_2074240_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 5.193e-321 992.0
MMD3_k127_2074240_1 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 6.594e-273 857.0
MMD3_k127_2074240_2 acetyl-CoA catabolic process K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 419.0
MMD3_k127_2074240_3 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 405.0
MMD3_k127_2074240_4 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001778 186.0
MMD3_k127_2085722_0 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000001901 160.0
MMD3_k127_2085722_1 PFAM Peptidase M16 - - - 0.0000000000000000000000000000000004786 135.0
MMD3_k127_2085722_2 Type II secretion system (T2SS), protein J K02459 - - 0.0000000000000000000009427 104.0
MMD3_k127_2085722_3 Prokaryotic N-terminal methylation motif K02457 - - 0.00000000000000000004049 96.0
MMD3_k127_2085722_5 COG3156 Type II secretory pathway component PulK K02460 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000000003319 78.0
MMD3_k127_2085722_6 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000006915 65.0
MMD3_k127_2085722_7 - - - - 0.00000001004 57.0
MMD3_k127_2108466_0 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 541.0
MMD3_k127_2108466_1 Phosphoglucan, water dikinase K15535 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019200,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046777,GO:0046835,GO:0051752,GO:0071704,GO:1901564,GO:1901575 2.7.9.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 332.0
MMD3_k127_2108466_2 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000001944 122.0
MMD3_k127_2108466_3 - - - - 0.0001479 46.0
MMD3_k127_2108466_4 - - - - 0.0002689 46.0
MMD3_k127_2145578_0 alpha amylase, catalytic region - - - 6.519e-222 694.0
MMD3_k127_2145578_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 308.0
MMD3_k127_2153145_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 1.115e-201 633.0
MMD3_k127_2153145_1 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 422.0
MMD3_k127_2153145_2 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 354.0
MMD3_k127_2153145_3 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.0000000000000001743 79.0
MMD3_k127_218089_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 381.0
MMD3_k127_218089_1 Protein of unknown function (DUF815) K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000008188 231.0
MMD3_k127_218089_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000006997 145.0
MMD3_k127_218089_3 PFAM aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000002198 115.0
MMD3_k127_218089_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000004705 71.0
MMD3_k127_218089_5 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00002161 46.0
MMD3_k127_218089_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00002394 56.0
MMD3_k127_2190572_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.027e-227 711.0
MMD3_k127_2190572_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 484.0
MMD3_k127_2190572_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 317.0
MMD3_k127_2190572_3 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000004198 72.0
MMD3_k127_2191191_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.741e-227 741.0
MMD3_k127_2191191_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 431.0
MMD3_k127_2191191_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000000459 198.0
MMD3_k127_2191191_11 PAS fold - - - 0.00000000000000000000000000000000000001894 154.0
MMD3_k127_2191191_12 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000002523 138.0
MMD3_k127_2191191_13 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000001317 122.0
MMD3_k127_2191191_14 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.00000000000000000000002077 107.0
MMD3_k127_2191191_15 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000473 96.0
MMD3_k127_2191191_16 Virulence factor BrkB K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000002858 83.0
MMD3_k127_2191191_18 Putative zinc- or iron-chelating domain K06940 - - 0.0001514 48.0
MMD3_k127_2191191_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 407.0
MMD3_k127_2191191_3 metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 377.0
MMD3_k127_2191191_4 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 362.0
MMD3_k127_2191191_5 Ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002567 273.0
MMD3_k127_2191191_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000002387 267.0
MMD3_k127_2191191_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000475 270.0
MMD3_k127_2191191_8 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002016 252.0
MMD3_k127_2191191_9 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000002669 203.0
MMD3_k127_2196220_0 Molecular chaperone. Has ATPase activity K04079 - - 9.253e-261 816.0
MMD3_k127_2196220_1 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 443.0
MMD3_k127_2196220_2 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 329.0
MMD3_k127_2196220_3 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000002041 234.0
MMD3_k127_2196220_4 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.000000000000000000000000000000000000000000000001345 181.0
MMD3_k127_2196220_5 metalloendopeptidase activity K03799 - - 0.000000000000000000000000000003975 132.0
MMD3_k127_2196220_6 Histidine kinase - - - 0.00000000000000000002212 102.0
MMD3_k127_2196220_7 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000002959 75.0
MMD3_k127_2218599_0 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 482.0
MMD3_k127_2218599_1 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 347.0
MMD3_k127_2218599_2 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 344.0
MMD3_k127_2218599_3 e3 binding domain K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 333.0
MMD3_k127_2218599_4 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 325.0
MMD3_k127_2218599_5 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000002799 222.0
MMD3_k127_2218599_6 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000002106 188.0
MMD3_k127_2218599_7 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000246 194.0
MMD3_k127_2218599_8 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000002889 177.0
MMD3_k127_2220441_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 527.0
MMD3_k127_2220441_1 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 409.0
MMD3_k127_2220441_10 Ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator K02584 - - 0.0000000000000003562 80.0
MMD3_k127_2220441_2 chemotaxis protein K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 329.0
MMD3_k127_2220441_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001103 290.0
MMD3_k127_2220441_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000002154 207.0
MMD3_k127_2220441_5 Histidine kinase K02668,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000001577 186.0
MMD3_k127_2220441_6 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000006506 158.0
MMD3_k127_2220441_7 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000009872 155.0
MMD3_k127_2220441_8 phosphorelay signal transduction system - - - 0.00000000000000000000000000000005272 128.0
MMD3_k127_2220441_9 HEAT repeat - - - 0.0000000000000000000000000001691 128.0
MMD3_k127_2230656_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 8.682e-294 908.0
MMD3_k127_2230656_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.591e-201 634.0
MMD3_k127_2230656_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 517.0
MMD3_k127_2230656_3 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K09181,K15520 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0030551,GO:0030552,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.3.1.189 0.000000000000000000000000000000000000000000002394 171.0
MMD3_k127_2264301_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 4.687e-205 647.0
MMD3_k127_2264301_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 522.0
MMD3_k127_2264301_10 Tetratricopeptide repeat - - - 0.00000000000000000002359 103.0
MMD3_k127_2264301_11 Roadblock/LC7 domain - - - 0.0000000000000000008779 90.0
MMD3_k127_2264301_12 PFAM thiamineS protein - - - 0.000000000008325 70.0
MMD3_k127_2264301_2 Receptor family ligand binding region K01999 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0070728,GO:0071702,GO:0071705 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 408.0
MMD3_k127_2264301_3 Metallopeptidase family M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006796 283.0
MMD3_k127_2264301_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000007075 248.0
MMD3_k127_2264301_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000003448 177.0
MMD3_k127_2264301_6 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000000000000000000000000002167 177.0
MMD3_k127_2264301_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000002039 173.0
MMD3_k127_2264301_8 Rubrerythrin - - - 0.000000000000000000000000000003195 126.0
MMD3_k127_2264301_9 TIGRFAM 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000000000000000000002561 116.0
MMD3_k127_2267435_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 2.894e-242 759.0
MMD3_k127_2267435_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.354e-227 707.0
MMD3_k127_2267435_10 NapC/NirT cytochrome c family, N-terminal region - - - 0.0005938 46.0
MMD3_k127_2267435_2 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 481.0
MMD3_k127_2267435_3 TrkA-N domain K03455,K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 370.0
MMD3_k127_2267435_4 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 326.0
MMD3_k127_2267435_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000202 248.0
MMD3_k127_2267435_6 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000003198 207.0
MMD3_k127_2267435_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000001826 202.0
MMD3_k127_2267435_8 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000007121 175.0
MMD3_k127_2267435_9 Protein of unknown function (DUF815) K06923 - - 0.0002065 44.0
MMD3_k127_2276292_0 ATPase histidine kinase DNA gyrase B HSP90 domain protein K07636 - 2.7.13.3 0.00000000002397 74.0
MMD3_k127_228546_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1018.0
MMD3_k127_228546_1 Endoribonuclease that initiates mRNA decay K18682 - - 5.485e-209 662.0
MMD3_k127_228546_10 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000005736 87.0
MMD3_k127_228546_11 Cytochrome c K12263 - - 0.000000000004641 72.0
MMD3_k127_228546_12 Fimbrial assembly protein (PilN) K02461 - - 0.000002877 59.0
MMD3_k127_228546_13 Protein of unknown function (DUF1573) - - - 0.00002387 48.0
MMD3_k127_228546_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006087 527.0
MMD3_k127_228546_3 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 452.0
MMD3_k127_228546_4 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 351.0
MMD3_k127_228546_5 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 328.0
MMD3_k127_228546_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 327.0
MMD3_k127_228546_7 prenyltransferase activity K03186,K16875 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000008646 208.0
MMD3_k127_228546_8 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000002335 127.0
MMD3_k127_228546_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000007624 93.0
MMD3_k127_2293616_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082 319.0
MMD3_k127_2293616_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 307.0
MMD3_k127_2293616_2 HD domain - - - 0.0000000000000000000000000000000000000000000000000004204 199.0
MMD3_k127_2293616_3 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000006867 145.0
MMD3_k127_2293616_4 sigma factor antagonist activity K04757 - 2.7.11.1 0.0000000000000002845 93.0
MMD3_k127_2293616_5 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.00004577 51.0
MMD3_k127_2294187_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 3.637e-263 820.0
MMD3_k127_2294187_1 drug resistance transporter, EmrB QacA subfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 587.0
MMD3_k127_2294187_2 HD domain - - - 0.000000000000000000000000000000000007326 148.0
MMD3_k127_2332999_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 585.0
MMD3_k127_2332999_1 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 374.0
MMD3_k127_2332999_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 312.0
MMD3_k127_2332999_3 ATPase activity K02010,K02049,K02068,K02071,K06857,K10112 - 3.6.3.30,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001928 276.0
MMD3_k127_2332999_4 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001527 274.0
MMD3_k127_2332999_5 Transcriptional regulator K11921,K19338 - - 0.0000000000000000000000000000000000000000000000000000428 198.0
MMD3_k127_2332999_6 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000001585 183.0
MMD3_k127_2332999_7 lyase activity - - - 0.000000000000000000000000000000000000000001094 163.0
MMD3_k127_2332999_8 low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.0000000000000000000002115 103.0
MMD3_k127_2353426_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.066e-209 657.0
MMD3_k127_2353426_1 Sigma-54 interaction domain K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 319.0
MMD3_k127_2353426_2 heat shock protein binding - - - 0.00000000000000000000000000000000001703 146.0
MMD3_k127_2353426_3 redox protein regulator of disulfide bond formation K07397 - - 0.000000000000000000003798 100.0
MMD3_k127_2353426_4 lyase activity - - - 0.000000000000000000238 88.0
MMD3_k127_2353426_5 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000001221 72.0
MMD3_k127_2353484_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 1.122e-266 833.0
MMD3_k127_2353484_1 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 296.0
MMD3_k127_2353484_2 2Fe-2S -binding domain K13483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001585 265.0
MMD3_k127_2353484_3 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000002158 146.0
MMD3_k127_2353484_4 - - - - 0.0000000000006563 70.0
MMD3_k127_2374114_0 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000002189 192.0
MMD3_k127_2374114_1 - - - - 0.000000008014 65.0
MMD3_k127_2376892_0 GAF domain - - - 9.45e-211 689.0
MMD3_k127_2376892_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000004152 244.0
MMD3_k127_2376892_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000003911 169.0
MMD3_k127_2391711_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008779 524.0
MMD3_k127_2391711_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 334.0
MMD3_k127_2391711_2 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 332.0
MMD3_k127_2391711_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000007913 209.0
MMD3_k127_2391711_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000144 204.0
MMD3_k127_2391711_6 Zn-ribbon protein possibly nucleic acid-binding - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000001625 61.0
MMD3_k127_2391711_8 PFAM nuclease (SNase domain protein) - - - 0.00005115 53.0
MMD3_k127_2391711_9 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0000917 51.0
MMD3_k127_2414620_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.732e-286 903.0
MMD3_k127_2414620_1 Glycosyl hydrolase family 57 - - - 1.427e-235 750.0
MMD3_k127_2414620_10 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001405 266.0
MMD3_k127_2414620_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000009791 174.0
MMD3_k127_2414620_12 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000004547 151.0
MMD3_k127_2414620_13 - - - - 0.0000000000000000000000000000417 132.0
MMD3_k127_2414620_14 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000000000002658 94.0
MMD3_k127_2414620_15 cell cycle K05589,K12065,K13052 - - 0.000000000001378 73.0
MMD3_k127_2414620_16 Endonuclease containing a URI domain K07461 - - 0.000000000002947 69.0
MMD3_k127_2414620_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 3.322e-204 643.0
MMD3_k127_2414620_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 597.0
MMD3_k127_2414620_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 499.0
MMD3_k127_2414620_5 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 468.0
MMD3_k127_2414620_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 430.0
MMD3_k127_2414620_7 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 403.0
MMD3_k127_2414620_8 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 379.0
MMD3_k127_2414620_9 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 379.0
MMD3_k127_2432617_0 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
MMD3_k127_2432617_1 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 294.0
MMD3_k127_2432617_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000257 271.0
MMD3_k127_2432617_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002828 274.0
MMD3_k127_2432617_4 Methyltransferase K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003404 250.0
MMD3_k127_2432617_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000001142 194.0
MMD3_k127_2432617_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000003812 191.0
MMD3_k127_2432617_7 PFAM PHP domain - - - 0.0000000000000000000000000000000000000000003382 166.0
MMD3_k127_2471095_0 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000912 249.0
MMD3_k127_2471095_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000001355 235.0
MMD3_k127_2471095_2 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.000000000000000000000000000000000000000000000000000000000005983 213.0
MMD3_k127_247850_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0 1160.0
MMD3_k127_247850_1 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 8.5e-321 986.0
MMD3_k127_247850_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 310.0
MMD3_k127_2496537_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.033e-277 866.0
MMD3_k127_2496537_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 483.0
MMD3_k127_2496537_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005612 271.0
MMD3_k127_2496537_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000001233 199.0
MMD3_k127_2496537_4 PFAM UspA - - - 0.000000000000000000000000000000000000000000000000000006985 202.0
MMD3_k127_2496537_5 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000009304 132.0
MMD3_k127_2496537_6 isochorismatase - - - 0.00007774 45.0
MMD3_k127_2512355_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 5.803e-243 757.0
MMD3_k127_2512355_1 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 3.223e-196 619.0
MMD3_k127_2512355_2 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001452 278.0
MMD3_k127_2512355_3 Acetoacetate decarboxylase (ADC) - - - 0.0000000000000001407 79.0
MMD3_k127_2516175_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1015.0
MMD3_k127_2516175_1 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 8.522e-305 952.0
MMD3_k127_2516175_2 FAD dependent oxidoreductase K16885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 452.0
MMD3_k127_2516175_3 nitrate reductase activity K03390,K16887,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 406.0
MMD3_k127_2516175_4 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 351.0
MMD3_k127_2516175_5 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003443 284.0
MMD3_k127_2516175_6 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007321 262.0
MMD3_k127_2516175_7 phosphorelay sensor kinase activity K07709,K07710 - 2.7.13.3 0.0000000000000000000000000000000000002065 153.0
MMD3_k127_2516175_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000009099 112.0
MMD3_k127_253934_0 Belongs to the peptidase M16 family K07263 - - 0.0 1042.0
MMD3_k127_253934_1 Endonuclease containing a URI domain K07461 - - 0.00000000000000000000000000000000000000267 148.0
MMD3_k127_253934_2 - - - - 0.0000000000000000000000008672 105.0
MMD3_k127_2542_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.505e-208 656.0
MMD3_k127_2542_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005043 270.0
MMD3_k127_2542_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000001401 57.0
MMD3_k127_2617203_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1248.0
MMD3_k127_2617203_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 8.347e-313 966.0
MMD3_k127_2617203_10 - - - - 0.00000000000000000000000000000000000000000000000000000001761 207.0
MMD3_k127_2617203_11 PFAM Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000001451 175.0
MMD3_k127_2617203_12 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000001845 128.0
MMD3_k127_2617203_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.263e-243 764.0
MMD3_k127_2617203_3 Fructose-bisphosphate aldolase class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 613.0
MMD3_k127_2617203_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 417.0
MMD3_k127_2617203_5 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 381.0
MMD3_k127_2617203_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 375.0
MMD3_k127_2617203_7 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003885 289.0
MMD3_k127_2617203_8 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000001029 250.0
MMD3_k127_2617203_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000017 219.0
MMD3_k127_2636720_0 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 0.0 1073.0
MMD3_k127_2636720_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 5.167e-212 668.0
MMD3_k127_2636720_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 469.0
MMD3_k127_2636720_3 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 312.0
MMD3_k127_2636720_4 PFAM lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000002141 242.0
MMD3_k127_2636720_5 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.00000000000000000004293 96.0
MMD3_k127_2636720_6 PFAM DsrE family protein K07235 - - 0.0000000002828 68.0
MMD3_k127_2636720_7 Universal stress protein family K07090 - - 0.00000002919 59.0
MMD3_k127_2636720_8 DsrE/DsrF-like family K07235 - - 0.00009331 47.0
MMD3_k127_2636720_9 sulfur relay protein TusB DsrH K07237 - - 0.0003497 47.0
MMD3_k127_2637794_0 TIGRFAM PAS domain S-box - - - 0.000000000000000000000000000000000000000000000002716 186.0
MMD3_k127_2637794_1 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000305 111.0
MMD3_k127_2637794_2 metal-dependent enzyme K09153 - - 0.0000000000000000000002033 100.0
MMD3_k127_2648635_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 323.0
MMD3_k127_2648635_1 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K00996 - 2.7.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 302.0
MMD3_k127_2648635_2 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001491 282.0
MMD3_k127_2648635_3 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000001593 233.0
MMD3_k127_2654695_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 527.0
MMD3_k127_2654695_1 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 449.0
MMD3_k127_2654695_2 Acyltransferase K00655 - 2.3.1.51 0.0000000000000004045 88.0
MMD3_k127_2654695_3 4Fe-4S dicluster domain - - - 0.000000000000002971 76.0
MMD3_k127_2654695_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000003779 76.0
MMD3_k127_2654695_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000649 68.0
MMD3_k127_2664284_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.541e-271 840.0
MMD3_k127_2664284_1 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 7.501e-198 626.0
MMD3_k127_2664284_2 isocitrate dehydrogenase activity K00031 GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 575.0
MMD3_k127_2664284_3 HD domain K07023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001962 272.0
MMD3_k127_2664284_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000006424 239.0
MMD3_k127_2664284_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002147 229.0
MMD3_k127_2664284_6 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000002123 216.0
MMD3_k127_2697511_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K02014 - - 7.907e-194 634.0
MMD3_k127_2697511_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00002301 53.0
MMD3_k127_2700956_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 401.0
MMD3_k127_2700956_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 323.0
MMD3_k127_2700956_2 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 290.0
MMD3_k127_2700956_3 Response regulator receiver K02485 - - 0.00000000000000000000000000000000000000000000000000000000001168 209.0
MMD3_k127_2705273_0 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003918 273.0
MMD3_k127_2705273_1 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000003758 236.0
MMD3_k127_2705273_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000009795 210.0
MMD3_k127_2705273_3 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000002857 205.0
MMD3_k127_2705273_4 PFAM regulatory protein, ArsR - - - 0.000000000000000000000000000000005274 141.0
MMD3_k127_2705273_5 AMP binding - - - 0.0000000000000000000000000000000698 127.0
MMD3_k127_2705273_6 PFAM Rhodanese domain protein - - - 0.000001146 57.0
MMD3_k127_2713693_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 7.2e-279 871.0
MMD3_k127_2713693_1 glycolate transport K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001534 271.0
MMD3_k127_2713693_2 PFAM Isochorismatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004717 235.0
MMD3_k127_2716799_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 3.067e-257 797.0
MMD3_k127_2716799_1 Membrane K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000009191 240.0
MMD3_k127_2735501_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 485.0
MMD3_k127_2735501_1 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 490.0
MMD3_k127_2735501_10 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.000000000000000000005363 100.0
MMD3_k127_2735501_11 PBS lyase HEAT-like repeat - - - 0.00000000000009374 83.0
MMD3_k127_2735501_2 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 471.0
MMD3_k127_2735501_3 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 368.0
MMD3_k127_2735501_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 365.0
MMD3_k127_2735501_5 Phosphoglucose isomerase K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 309.0
MMD3_k127_2735501_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 306.0
MMD3_k127_2735501_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000003344 189.0
MMD3_k127_2735501_8 Response regulator receiver domain K03413 - - 0.000000000000000000000000000000000000000002489 162.0
MMD3_k127_2735501_9 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000001187 130.0
MMD3_k127_2744619_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001209 276.0
MMD3_k127_2744619_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001088 240.0
MMD3_k127_2744619_2 - - - - 0.000000000000000000000007084 107.0
MMD3_k127_2747969_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1614.0
MMD3_k127_2747969_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07789,K18138 - - 9.743e-246 766.0
MMD3_k127_2747969_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 455.0
MMD3_k127_2747969_3 Glycosyl hydrolase family 57 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 398.0
MMD3_k127_2747969_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001712 275.0
MMD3_k127_2747969_5 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000009341 265.0
MMD3_k127_2747969_6 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003584 262.0
MMD3_k127_2747969_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000001995 99.0
MMD3_k127_2747969_8 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.00000001455 68.0
MMD3_k127_276989_0 Sigma-54 interaction domain - - - 8.682e-238 747.0
MMD3_k127_276989_1 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 476.0
MMD3_k127_276989_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 411.0
MMD3_k127_276989_3 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 291.0
MMD3_k127_276989_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000005936 196.0
MMD3_k127_276989_5 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000006796 167.0
MMD3_k127_276989_6 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000004819 138.0
MMD3_k127_276989_7 Putative zinc- or iron-chelating domain - - - 0.00000000000000000002247 96.0
MMD3_k127_276989_8 - - - - 0.000000000622 63.0
MMD3_k127_276989_9 Heavy-metal-associated domain K07213 - - 0.00003749 48.0
MMD3_k127_2775445_0 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000001193 214.0
MMD3_k127_2775445_1 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000003187 212.0
MMD3_k127_2775445_2 mRNA cleavage and polyadenylation factor CLP1 P-loop K06947 - - 0.0000000000000000000000000000000000000000000000000005822 194.0
MMD3_k127_2775445_3 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000000000000000000000004589 168.0
MMD3_k127_2775445_4 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000009173 154.0
MMD3_k127_2775445_5 Cold shock K03704 - - 0.000000000000000000000000001968 112.0
MMD3_k127_2775445_6 - - - - 0.000000000000003438 78.0
MMD3_k127_2783280_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 559.0
MMD3_k127_2783280_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 500.0
MMD3_k127_2783280_2 Bacterial regulatory protein, Fis family K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 347.0
MMD3_k127_2783280_3 Carbohydrate-binding family 9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002854 267.0
MMD3_k127_2783280_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000001263 201.0
MMD3_k127_2783280_5 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000001549 199.0
MMD3_k127_278674_0 Sigma-54 interaction domain - - - 2.236e-210 662.0
MMD3_k127_278674_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 353.0
MMD3_k127_278674_2 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009594 228.0
MMD3_k127_2798140_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - - 0.0 1118.0
MMD3_k127_2804664_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.107e-279 873.0
MMD3_k127_2804664_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 533.0
MMD3_k127_2804664_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000143 273.0
MMD3_k127_2804664_3 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000001254 120.0
MMD3_k127_2819994_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 459.0
MMD3_k127_2819996_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1095.0
MMD3_k127_2819996_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 298.0
MMD3_k127_2819996_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000006447 145.0
MMD3_k127_2819996_4 response regulator - - - 0.00000000000000000000000000000005786 137.0
MMD3_k127_2819996_5 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000001242 111.0
MMD3_k127_282200_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 336.0
MMD3_k127_282200_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009364 241.0
MMD3_k127_282200_2 Metallopeptidase family M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000009948 224.0
MMD3_k127_282200_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000002428 179.0
MMD3_k127_283288_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1233.0
MMD3_k127_283288_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000004243 253.0
MMD3_k127_283288_2 Domain of unknown function (DUF4203) - - - 0.000000000000000000000000000005164 126.0
MMD3_k127_283288_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000004075 66.0
MMD3_k127_2848876_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 512.0
MMD3_k127_2848876_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003239 274.0
MMD3_k127_2850716_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2108.0
MMD3_k127_2850716_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1872.0
MMD3_k127_2850716_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 338.0
MMD3_k127_2850716_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 344.0
MMD3_k127_2850716_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001102 257.0
MMD3_k127_2850716_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000002859 208.0
MMD3_k127_2850716_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000001917 196.0
MMD3_k127_2850716_7 Ribosomal protein L10 K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000002479 138.0
MMD3_k127_2850716_8 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000004048 67.0
MMD3_k127_2857545_0 Elongation factor G, domain IV K02355 - - 8.119e-298 927.0
MMD3_k127_2857545_1 SMART Elongator protein 3 MiaB NifB K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 460.0
MMD3_k127_2857545_11 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.000000000000000000004181 98.0
MMD3_k127_2857545_12 DUF218 domain - - - 0.00000000000000002022 91.0
MMD3_k127_2857545_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 436.0
MMD3_k127_2857545_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 431.0
MMD3_k127_2857545_4 Male sterility protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 293.0
MMD3_k127_2857545_5 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008817 245.0
MMD3_k127_2857545_6 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000004069 199.0
MMD3_k127_2857545_7 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000004879 204.0
MMD3_k127_2857545_8 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000001934 169.0
MMD3_k127_2857545_9 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000007663 151.0
MMD3_k127_2899854_0 Cytochrome c bacterial - - - 2.39e-199 631.0
MMD3_k127_2899854_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 616.0
MMD3_k127_2899854_10 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000007603 208.0
MMD3_k127_2899854_11 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000000000000004647 128.0
MMD3_k127_2899854_12 bacterial (prokaryotic) histone like domain K05788 - - 0.000000000000000000000000002242 113.0
MMD3_k127_2899854_14 - - - - 0.0008164 48.0
MMD3_k127_2899854_2 Protein of unknown function (DUF3373) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 541.0
MMD3_k127_2899854_3 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 507.0
MMD3_k127_2899854_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 455.0
MMD3_k127_2899854_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 434.0
MMD3_k127_2899854_6 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 411.0
MMD3_k127_2899854_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 319.0
MMD3_k127_2899854_8 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 312.0
MMD3_k127_2899854_9 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000006897 269.0
MMD3_k127_2920221_0 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 301.0
MMD3_k127_2920221_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000001869 189.0
MMD3_k127_2920221_2 Domain of unknown function (DUF1992) - - - 0.0000000000000000000000000341 109.0
MMD3_k127_2920221_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000001023 114.0
MMD3_k127_2920221_4 - - - - 0.00000001733 60.0
MMD3_k127_2920221_5 Resolvase - - - 0.0000002007 55.0
MMD3_k127_2939293_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1614.0
MMD3_k127_2939293_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07789,K18138 - - 0.0 1508.0
MMD3_k127_2939293_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 479.0
MMD3_k127_2939293_3 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000008626 93.0
MMD3_k127_3016187_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 9.543e-317 994.0
MMD3_k127_3016187_1 Extracellular solute-binding protein, family 5 K02035 - - 2.663e-226 712.0
MMD3_k127_3016187_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 436.0
MMD3_k127_3016187_3 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 406.0
MMD3_k127_3016187_4 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 394.0
MMD3_k127_3016187_5 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000306 153.0
MMD3_k127_3089918_0 HD domain - - - 0.0000000000000000000000000000000000000000000000001364 192.0
MMD3_k127_3089918_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000003103 84.0
MMD3_k127_3089918_2 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.000000002387 62.0
MMD3_k127_3094170_0 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 325.0
MMD3_k127_3094170_1 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000003091 174.0
MMD3_k127_3094170_2 Glycosyltransferase, group 2 family protein K12990 - - 0.00000000000000000000000000003158 126.0
MMD3_k127_3140392_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 9.515e-285 882.0
MMD3_k127_3140392_1 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 370.0
MMD3_k127_3140392_2 electron transfer activity K05337,K17247 - - 0.0000000000000000000006639 96.0
MMD3_k127_3140392_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000003546 93.0
MMD3_k127_3140392_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000005482 74.0
MMD3_k127_3230456_0 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 1.543e-300 936.0
MMD3_k127_3230456_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 551.0
MMD3_k127_3230456_10 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 294.0
MMD3_k127_3230456_11 PFAM ABC transporter related K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 293.0
MMD3_k127_3230456_12 TIGRFAM cytochrome C family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003841 284.0
MMD3_k127_3230456_13 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005501 272.0
MMD3_k127_3230456_14 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000072 264.0
MMD3_k127_3230456_15 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000003451 238.0
MMD3_k127_3230456_16 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000007847 241.0
MMD3_k127_3230456_17 Protein of unknown function DUF116 K09729 - - 0.000000000000000000000000000000000000000000000000000000000000002564 221.0
MMD3_k127_3230456_18 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000001527 207.0
MMD3_k127_3230456_19 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000000000000001239 193.0
MMD3_k127_3230456_2 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 518.0
MMD3_k127_3230456_20 cyclic nucleotide binding K01420,K10716,K10914 - - 0.00000000000000000000000000000000000000000002241 169.0
MMD3_k127_3230456_21 Belongs to the RtcB family K14415 GO:0000166,GO:0000394,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003972,GO:0005488,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0017076,GO:0019001,GO:0019002,GO:0030145,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 6.5.1.3 0.000000000000000000000000000000000001036 141.0
MMD3_k127_3230456_22 OstA-like protein K09774 - - 0.00000000000000000000000000000000001359 140.0
MMD3_k127_3230456_23 PFAM Archease protein family (DUF101 UPF0211) - - - 0.00000000000000000000000000000000001534 139.0
MMD3_k127_3230456_24 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000000000000000000000000693 132.0
MMD3_k127_3230456_25 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000003875 109.0
MMD3_k127_3230456_26 toxin-antitoxin pair type II binding K08591,K19159 GO:0003674,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097351,GO:1903506,GO:2000112,GO:2001141 2.3.1.15 0.000000000000000000000496 98.0
MMD3_k127_3230456_27 PAP2 superfamily - - - 0.0000000000000001406 87.0
MMD3_k127_3230456_28 PFAM Rhodanese-like domain - - - 0.000000000000001156 84.0
MMD3_k127_3230456_29 transferase activity, transferring glycosyl groups - - - 0.000000003116 64.0
MMD3_k127_3230456_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006326 470.0
MMD3_k127_3230456_30 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.00000002493 65.0
MMD3_k127_3230456_31 competence protein - - - 0.000006307 58.0
MMD3_k127_3230456_33 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0006574 46.0
MMD3_k127_3230456_4 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 451.0
MMD3_k127_3230456_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 380.0
MMD3_k127_3230456_6 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 378.0
MMD3_k127_3230456_7 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 365.0
MMD3_k127_3230456_8 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 354.0
MMD3_k127_3230456_9 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 315.0
MMD3_k127_3246582_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 579.0
MMD3_k127_3246582_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 361.0
MMD3_k127_3246582_2 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 335.0
MMD3_k127_3246582_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 312.0
MMD3_k127_3246582_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000138 284.0
MMD3_k127_3246582_5 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000003088 213.0
MMD3_k127_3246582_6 response regulator - - - 0.000000000000000000000000000000000001902 147.0
MMD3_k127_3248864_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1201.0
MMD3_k127_3248864_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 413.0
MMD3_k127_3248864_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000076 224.0
MMD3_k127_3248864_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000009625 207.0
MMD3_k127_3248864_4 SWI complex, BAF60b domains - - - 0.000000000000000000000000003043 115.0
MMD3_k127_3248864_5 Cytochrome c - - - 0.00000000000000001547 87.0
MMD3_k127_3251314_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.747e-281 880.0
MMD3_k127_3251314_1 Dehydratase family K01687 - 4.2.1.9 6.428e-260 810.0
MMD3_k127_3251314_10 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000001802 123.0
MMD3_k127_3251314_11 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000008201 88.0
MMD3_k127_3251314_2 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 6.679e-243 766.0
MMD3_k127_3251314_3 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 377.0
MMD3_k127_3251314_4 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 379.0
MMD3_k127_3251314_5 PFAM peptidase M16 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 310.0
MMD3_k127_3251314_6 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009747 270.0
MMD3_k127_3251314_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002596 265.0
MMD3_k127_3251314_8 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000126 217.0
MMD3_k127_3251314_9 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000001177 128.0
MMD3_k127_325785_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 338.0
MMD3_k127_325785_1 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 337.0
MMD3_k127_325785_2 PFAM ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000003862 222.0
MMD3_k127_325785_3 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000006534 198.0
MMD3_k127_325785_4 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000000000000000000000000000000000000000001088 190.0
MMD3_k127_325785_5 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000000000000000000002262 186.0
MMD3_k127_325785_6 Cytochrome c K12263 - - 0.000000000000001032 83.0
MMD3_k127_325785_7 anaerobic respiration - - - 0.0000007764 55.0
MMD3_k127_325785_9 Protein of unknown function (DUF1573) - - - 0.0001178 46.0
MMD3_k127_3260233_0 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 3.579e-249 776.0
MMD3_k127_3260233_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 7.808e-240 751.0
MMD3_k127_3260233_10 Protein of unknown function (DUF1810) - - - 0.0000000000000000000000000000000000000000000000000000000528 200.0
MMD3_k127_3260233_11 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000001646 160.0
MMD3_k127_3260233_12 ThiS family K03636 - - 0.0000000000000000000000000000000001048 136.0
MMD3_k127_3260233_13 NIL - - - 0.0000000000000000000000000001942 115.0
MMD3_k127_3260233_14 PFAM Smr protein MutS2 - - - 0.0000000000000000000000000002015 123.0
MMD3_k127_3260233_15 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000002003 99.0
MMD3_k127_3260233_16 Membrane - - - 0.00000000000000000003946 102.0
MMD3_k127_3260233_17 Phospholipid methyltransferase - - - 0.00000000000000003769 89.0
MMD3_k127_3260233_18 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000009827 78.0
MMD3_k127_3260233_2 - - - - 2.002e-220 698.0
MMD3_k127_3260233_20 Putative zinc- or iron-chelating domain - - - 0.00000000461 58.0
MMD3_k127_3260233_21 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000001881 57.0
MMD3_k127_3260233_3 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 1.255e-214 672.0
MMD3_k127_3260233_4 ACT domain K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 521.0
MMD3_k127_3260233_5 Metalloenzyme superfamily K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 514.0
MMD3_k127_3260233_6 LysM domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 344.0
MMD3_k127_3260233_7 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001621 269.0
MMD3_k127_3260233_8 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000001323 238.0
MMD3_k127_3260233_9 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000009853 236.0
MMD3_k127_3270804_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 456.0
MMD3_k127_3270804_1 B3/4 domain K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000001711 227.0
MMD3_k127_3270804_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000002889 186.0
MMD3_k127_3270804_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000001886 152.0
MMD3_k127_3270804_4 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000006871 88.0
MMD3_k127_3285731_0 isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 459.0
MMD3_k127_3285731_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 313.0
MMD3_k127_3285731_2 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 302.0
MMD3_k127_3285731_3 Putative regulatory protein - - - 0.0000000000000000000001753 99.0
MMD3_k127_3285731_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000004304 55.0
MMD3_k127_3285731_5 Protein involved in outer membrane biogenesis K07289 - - 0.0002859 50.0
MMD3_k127_3290641_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.317e-268 838.0
MMD3_k127_3290641_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 360.0
MMD3_k127_3290641_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000001044 235.0
MMD3_k127_3296189_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - - 2.075e-313 966.0
MMD3_k127_3296189_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 368.0
MMD3_k127_3296189_2 SMART Cold shock protein K03704 - - 0.0000000000000000000000005871 106.0
MMD3_k127_3296189_3 PFAM LemA family protein K03744 - - 0.000000000000000001377 86.0
MMD3_k127_3296189_4 - - - - 0.0000000000001942 72.0
MMD3_k127_3318700_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 4.192e-311 969.0
MMD3_k127_3319218_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001354 266.0
MMD3_k127_3319218_1 phosphorelay sensor kinase activity K13924 - 2.1.1.80,3.1.1.61 0.000745 51.0
MMD3_k127_3324723_0 Aminotransferase class I and II K14261 - - 1.201e-210 659.0
MMD3_k127_3324723_1 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 590.0
MMD3_k127_3324723_10 Nitroreductase family - - - 0.00000000000000000000000000000000003468 141.0
MMD3_k127_3324723_11 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000001137 123.0
MMD3_k127_3324723_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11383 - 2.7.13.3 0.000000277 63.0
MMD3_k127_3324723_14 - - - - 0.00001723 51.0
MMD3_k127_3324723_15 PFAM Lytic transglycosylase catalytic - - - 0.0001018 53.0
MMD3_k127_3324723_2 Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 559.0
MMD3_k127_3324723_3 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 534.0
MMD3_k127_3324723_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 430.0
MMD3_k127_3324723_5 kinase activity K01006,K01007,K22424 - 2.7.3.13,2.7.9.1,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 405.0
MMD3_k127_3324723_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 336.0
MMD3_k127_3324723_7 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 302.0
MMD3_k127_3324723_8 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000000000000000000000000006622 222.0
MMD3_k127_3324723_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000009822 181.0
MMD3_k127_3328952_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07789,K18138 - - 0.0 1129.0
MMD3_k127_3328952_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 526.0
MMD3_k127_3328952_2 PFAM Smr protein MutS2 - - - 0.00000000000000000000000000001725 120.0
MMD3_k127_3340023_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 521.0
MMD3_k127_3340023_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00002032 55.0
MMD3_k127_3340023_3 PFAM Chorismate mutase, type II K04782 - 4.2.99.21 0.0008195 42.0
MMD3_k127_334089_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 5.279e-312 963.0
MMD3_k127_334089_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001207 238.0
MMD3_k127_3352660_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007678 603.0
MMD3_k127_3352660_1 NosL - - - 0.000000000000005557 78.0
MMD3_k127_3352907_0 ATPase BadF BadG BcrA BcrD type - - - 0.0 1540.0
MMD3_k127_3352907_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 299.0
MMD3_k127_3352907_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000005614 194.0
MMD3_k127_3352907_3 Protein of unknown function (DUF1460) - - - 0.0000000001541 71.0
MMD3_k127_3368389_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 508.0
MMD3_k127_3368389_1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 456.0
MMD3_k127_3368389_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 421.0
MMD3_k127_3368389_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 407.0
MMD3_k127_3368389_4 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001015 267.0
MMD3_k127_3368389_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000003413 207.0
MMD3_k127_3368389_6 PFAM Protein phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000001148 188.0
MMD3_k127_3368389_7 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000312 165.0
MMD3_k127_3384342_0 Protein of unknown function, DUF255 K06888 - - 3.969e-241 761.0
MMD3_k127_3384342_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008766 572.0
MMD3_k127_3384342_10 - - - - 0.00001244 58.0
MMD3_k127_3384342_2 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 511.0
MMD3_k127_3384342_3 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 417.0
MMD3_k127_3384342_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 398.0
MMD3_k127_3384342_5 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003333 264.0
MMD3_k127_3384342_6 DJ-1/PfpI family K03152,K05520,K05687 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000002296 240.0
MMD3_k127_3384342_7 (SAM)-dependent - - - 0.0000000000000000000000000000000000000000000000000000000003593 212.0
MMD3_k127_3384342_8 retrograde transport, endosome to Golgi K07095 - - 0.0000000000000000000000000000000000000000000000001124 184.0
MMD3_k127_3384342_9 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000006574 171.0
MMD3_k127_338732_0 AcrB/AcrD/AcrF family - - - 1.912e-198 636.0
MMD3_k127_338732_1 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003291 235.0
MMD3_k127_3388710_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 583.0
MMD3_k127_3388710_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 346.0
MMD3_k127_3388710_2 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 302.0
MMD3_k127_3388710_3 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000000000000000000000000000000000000000000000000001549 209.0
MMD3_k127_3388710_4 Domain of unknown function (DUF202) K00389 - - 0.000000000000000000000000000000000000000187 155.0
MMD3_k127_3388710_5 PFAM 4Fe-4S binding domain - - - 0.00000000000000000000000000000000001413 137.0
MMD3_k127_3389641_0 Glucodextranase, domain N K01178 - 3.2.1.3 0.0 1118.0
MMD3_k127_3389641_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 9.523e-234 730.0
MMD3_k127_3389641_2 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 2.822e-211 664.0
MMD3_k127_3389641_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 458.0
MMD3_k127_3389641_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 382.0
MMD3_k127_3389641_5 ATP cone domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009563 237.0
MMD3_k127_3394797_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1005.0
MMD3_k127_3394797_1 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 4.175e-237 752.0
MMD3_k127_3394797_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000001668 247.0
MMD3_k127_3394797_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 0.00000000000001348 74.0
MMD3_k127_3394797_4 - - - - 0.000004674 53.0
MMD3_k127_3394797_5 - - - - 0.000009229 49.0
MMD3_k127_3408722_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 2.788e-252 792.0
MMD3_k127_3408722_1 Proton-conducting membrane transporter K00342 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 1.577e-201 642.0
MMD3_k127_3408722_2 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 269.0
MMD3_k127_3408722_3 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001198 189.0
MMD3_k127_3408722_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000007221 142.0
MMD3_k127_3408722_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000001185 64.0
MMD3_k127_3425113_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 450.0
MMD3_k127_3425113_1 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 407.0
MMD3_k127_3438809_0 acetyl-CoA carboxylase, biotin carboxylase K01965 - 6.4.1.3 2.722e-215 674.0
MMD3_k127_3438809_1 Conserved carboxylase domain K01958 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000002302 186.0
MMD3_k127_3463421_0 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000668 307.0
MMD3_k127_3463421_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002172 260.0
MMD3_k127_3463421_2 Secretion protein, HlyD K03543 - - 0.0000000000000000000000000000000003843 144.0
MMD3_k127_3463421_3 ABC-2 family transporter protein K01992 - - 0.000000001401 63.0
MMD3_k127_3502412_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 403.0
MMD3_k127_3502412_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 390.0
MMD3_k127_3502412_2 membrane K09133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 343.0
MMD3_k127_3502412_3 protein tyrosine phosphatase activity K01104,K19302 - 3.1.3.48,3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000007617 236.0
MMD3_k127_3502412_4 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000002084 205.0
MMD3_k127_3502412_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 - 2.1.1.200,3.5.1.19,6.1.1.16 0.0000000000000003506 83.0
MMD3_k127_3509345_0 COG0058 Glucan phosphorylase - - - 6.594e-258 806.0
MMD3_k127_3509345_1 Actin K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 529.0
MMD3_k127_3509345_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 440.0
MMD3_k127_3509345_3 Peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 406.0
MMD3_k127_3509345_4 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000006081 239.0
MMD3_k127_3509345_5 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000001903 168.0
MMD3_k127_3509345_6 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000009825 149.0
MMD3_k127_3509345_7 RDD family - - - 0.0000000000000000000000000103 114.0
MMD3_k127_3509345_8 exodeoxyribonuclease I activity - - - 0.000000001403 64.0
MMD3_k127_3509345_9 TIGRFAM rod shape-determining protein MreD - - - 0.000799 49.0
MMD3_k127_3534659_0 PFAM Radical SAM - - - 2.182e-208 658.0
MMD3_k127_3534659_1 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 331.0
MMD3_k127_3534659_2 integral membrane protein - - - 0.0000003589 57.0
MMD3_k127_3583000_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.95e-226 711.0
MMD3_k127_3583000_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 408.0
MMD3_k127_3583000_2 PFAM cobalamin (vitamin B12) biosynthesis CbiM K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002799 271.0
MMD3_k127_3583000_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006959 265.0
MMD3_k127_3583000_4 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000003372 128.0
MMD3_k127_3583000_5 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000001163 103.0
MMD3_k127_3590475_0 Phosphoglucose isomerase K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 1.861e-285 886.0
MMD3_k127_3590475_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 546.0
MMD3_k127_3590475_2 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 315.0
MMD3_k127_3590475_3 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0000000000000000003034 87.0
MMD3_k127_3647248_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 445.0
MMD3_k127_3647248_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 385.0
MMD3_k127_3647248_2 PFAM cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 302.0
MMD3_k127_3647248_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000004743 126.0
MMD3_k127_3647248_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000718 123.0
MMD3_k127_3647248_5 - - - - 0.00000000005278 66.0
MMD3_k127_3647248_6 Domain of unknown function (DUF4912) K09942 - - 0.0001602 52.0
MMD3_k127_3652907_0 Bacterial type II and III secretion system protein K02453,K03219 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 312.0
MMD3_k127_3652907_1 group 2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000004165 228.0
MMD3_k127_3652907_2 - - - - 0.00000000002362 76.0
MMD3_k127_3652907_3 Uncharacterized conserved protein (DUF2304) - - - 0.0000000173 62.0
MMD3_k127_3652907_4 beta-fructofuranosidase activity - - - 0.0000003937 58.0
MMD3_k127_3652907_5 PFAM Tetratricopeptide repeat - - - 0.0000007089 60.0
MMD3_k127_3702795_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537 - 3.6.3.8 3.614e-272 859.0
MMD3_k127_3702795_1 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 1.072e-222 694.0
MMD3_k127_3702795_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 599.0
MMD3_k127_3702795_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 331.0
MMD3_k127_3702795_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000001338 204.0
MMD3_k127_3702795_5 PFAM FRG domain - - - 0.000000000000000000000000000000000000002211 154.0
MMD3_k127_3702795_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000004495 128.0
MMD3_k127_3761874_0 proline betaine transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 539.0
MMD3_k127_3761874_1 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000006016 184.0
MMD3_k127_3761874_2 HD domain - - - 0.00000000000000000000000000000007615 139.0
MMD3_k127_3766575_0 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004162 281.0
MMD3_k127_3766575_1 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000005054 160.0
MMD3_k127_3779857_0 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000002474 184.0
MMD3_k127_3779857_1 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.00000000000000000000000000000000919 133.0
MMD3_k127_3779857_2 DNA ligase K07468 - 6.5.1.1 0.000000000000000000000000000003446 125.0
MMD3_k127_3810432_0 S1, RNA binding domain K06959 - - 0.0 1049.0
MMD3_k127_3810432_1 ABC transporter C-terminal domain K15738 - - 1.782e-234 741.0
MMD3_k127_3810432_2 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 574.0
MMD3_k127_3810432_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 374.0
MMD3_k127_3810432_4 THUMP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002483 254.0
MMD3_k127_3810432_5 - - - - 0.000000000000000000000000000000000000000000000000003526 197.0
MMD3_k127_3810432_6 S1 domain K00243 - - 0.0000000000000000000000003371 108.0
MMD3_k127_3810432_7 DNA polymerase LigD, polymerase domain K01971 - 6.5.1.1 0.00000000006606 64.0
MMD3_k127_3841860_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 9.823e-274 857.0
MMD3_k127_3841860_1 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 7.211e-235 741.0
MMD3_k127_3841860_10 Belongs to the sulfur carrier protein TusA family - - - 0.000000000003088 69.0
MMD3_k127_3841860_11 Tetratricopeptide repeat - - - 0.0000122 48.0
MMD3_k127_3841860_13 cytochrome C-type protein K15876 - - 0.0003895 51.0
MMD3_k127_3841860_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.446e-226 709.0
MMD3_k127_3841860_3 Aminotransferase class-III K01845 - 5.4.3.8 4.625e-200 630.0
MMD3_k127_3841860_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.825e-195 623.0
MMD3_k127_3841860_5 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 432.0
MMD3_k127_3841860_6 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000201 256.0
MMD3_k127_3841860_7 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000002618 226.0
MMD3_k127_3841860_8 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000004334 196.0
MMD3_k127_3841860_9 Stringent starvation protein B K09985 - - 0.000000000000000000000000000007953 123.0
MMD3_k127_3865496_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 6.499e-297 919.0
MMD3_k127_3865496_1 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 386.0
MMD3_k127_3865496_10 - - - - 0.0000000000000000000000000000000000000000000000000151 203.0
MMD3_k127_3865496_11 NosL - - - 0.00000000000000000000000000000000000000003873 157.0
MMD3_k127_3865496_12 - - - - 0.0000000000000000000001454 106.0
MMD3_k127_3865496_13 - - - - 0.0000000000002584 73.0
MMD3_k127_3865496_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 384.0
MMD3_k127_3865496_3 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 339.0
MMD3_k127_3865496_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 310.0
MMD3_k127_3865496_5 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003081 280.0
MMD3_k127_3865496_6 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000006957 259.0
MMD3_k127_3865496_7 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000005799 255.0
MMD3_k127_3865496_8 PFAM SEC-C motif K09858 - - 0.0000000000000000000000000000000000000000000000000000000000007498 214.0
MMD3_k127_3865496_9 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000005345 202.0
MMD3_k127_3897676_0 AIR synthase related protein, N-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 413.0
MMD3_k127_3897676_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 327.0
MMD3_k127_3897676_2 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000002566 125.0
MMD3_k127_3897676_3 - - - - 0.000000000000000001848 91.0
MMD3_k127_3897676_4 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000005145 79.0
MMD3_k127_3907665_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 2.572e-251 793.0
MMD3_k127_3907665_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.045e-229 724.0
MMD3_k127_3907665_10 ABC transporter (Permease K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 350.0
MMD3_k127_3907665_11 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 339.0
MMD3_k127_3907665_12 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 315.0
MMD3_k127_3907665_13 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000001297 262.0
MMD3_k127_3907665_14 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000003963 232.0
MMD3_k127_3907665_15 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000009009 222.0
MMD3_k127_3907665_16 helix_turn_helix, cAMP Regulatory protein - - - 0.000000000000000000000000000000000000000000000000000001345 203.0
MMD3_k127_3907665_17 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000002546 187.0
MMD3_k127_3907665_18 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000006232 198.0
MMD3_k127_3907665_19 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000006699 185.0
MMD3_k127_3907665_2 AMP-binding enzyme C-terminal domain K05939 - 2.3.1.40,6.2.1.20 2.232e-214 678.0
MMD3_k127_3907665_20 transmembrane transport K02025,K02026,K15771 - - 0.000000000000000000000000000001422 123.0
MMD3_k127_3907665_21 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000007976 116.0
MMD3_k127_3907665_22 nucleotidyltransferase activity K07075 - - 0.0000000000000000000000027 109.0
MMD3_k127_3907665_23 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000007601 102.0
MMD3_k127_3907665_24 - - - - 0.00000000000000000000009878 102.0
MMD3_k127_3907665_25 Domain of unknown function (DUF1858) - - - 0.0000000000000000004198 89.0
MMD3_k127_3907665_27 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000139 53.0
MMD3_k127_3907665_28 protein trimerization K07114 - - 0.000006509 56.0
MMD3_k127_3907665_29 4Fe-4S binding domain - - - 0.00001934 48.0
MMD3_k127_3907665_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 2.844e-209 664.0
MMD3_k127_3907665_4 Peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 527.0
MMD3_k127_3907665_5 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 503.0
MMD3_k127_3907665_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 460.0
MMD3_k127_3907665_7 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 431.0
MMD3_k127_3907665_8 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 397.0
MMD3_k127_3907665_9 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 375.0
MMD3_k127_3909842_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 465.0
MMD3_k127_3909842_1 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 342.0
MMD3_k127_3909842_2 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000002361 258.0
MMD3_k127_3909842_3 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001008 258.0
MMD3_k127_3909842_4 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000005618 222.0
MMD3_k127_3909842_5 phosphorelay signal transduction system K07714 - - 0.0000000000000000000000000000000000000006677 152.0
MMD3_k127_3909842_6 - - - - 0.0000000000000000000000004739 109.0
MMD3_k127_3909842_7 - - - - 0.000000000001177 74.0
MMD3_k127_3909842_8 - - - - 0.000000000006527 69.0
MMD3_k127_3927440_0 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 411.0
MMD3_k127_3927440_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000102 196.0
MMD3_k127_3927440_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000009703 145.0
MMD3_k127_3927440_3 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 2.3.1.128 0.00009437 51.0
MMD3_k127_3935777_0 Glucose-6-phosphate dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 576.0
MMD3_k127_3935777_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 351.0
MMD3_k127_3956602_0 PFAM natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009482 574.0
MMD3_k127_3956602_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 395.0
MMD3_k127_3956602_2 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 382.0
MMD3_k127_3956602_3 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 302.0
MMD3_k127_3956602_4 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001587 276.0
MMD3_k127_3956602_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 0.0000000114 56.0
MMD3_k127_4025871_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 9.268e-261 818.0
MMD3_k127_4025871_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.203e-240 756.0
MMD3_k127_4025871_10 transmembrane signaling receptor activity K02660,K03406,K03776,K11525 - - 0.00000000000000000000000000000000000000000000000000000000001257 211.0
MMD3_k127_4025871_11 FeS cluster assembly scaffold protein NifU K04488 - - 0.0000000000000000000000000000000000000000000000000003715 193.0
MMD3_k127_4025871_13 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.000000000000000000000000000000000000000000000000004526 190.0
MMD3_k127_4025871_14 4Fe-4S dicluster domain K00196 - - 0.0000000000000000000000000000000000000000000000002458 181.0
MMD3_k127_4025871_15 Transcriptional regulator - - - 0.000000000000000000000000000000000000001399 152.0
MMD3_k127_4025871_16 conserved protein (DUF2196) - - - 0.0000000000000000000000001977 108.0
MMD3_k127_4025871_17 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000001085 113.0
MMD3_k127_4025871_18 Sulfurtransferase TusA - - - 0.000000000000000000001377 98.0
MMD3_k127_4025871_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 452.0
MMD3_k127_4025871_3 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 415.0
MMD3_k127_4025871_4 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 389.0
MMD3_k127_4025871_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 329.0
MMD3_k127_4025871_6 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004357 265.0
MMD3_k127_4025871_7 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001477 235.0
MMD3_k127_4025871_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000002723 232.0
MMD3_k127_4025871_9 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000003007 232.0
MMD3_k127_4026686_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 411.0
MMD3_k127_4026686_1 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 341.0
MMD3_k127_4026686_10 response regulator K02667 - - 0.000000000007044 76.0
MMD3_k127_4026686_11 protein transport across the cell outer membrane K02246,K02457,K02459,K02672,K08084 - - 0.00000000006247 71.0
MMD3_k127_4026686_12 - - - - 0.000002182 57.0
MMD3_k127_4026686_13 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.000006107 49.0
MMD3_k127_4026686_14 - - - - 0.00001833 57.0
MMD3_k127_4026686_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 338.0
MMD3_k127_4026686_3 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 329.0
MMD3_k127_4026686_4 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003595 272.0
MMD3_k127_4026686_5 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000003694 193.0
MMD3_k127_4026686_6 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000007444 182.0
MMD3_k127_4026686_7 SPTR Lysine exporter protein (LYSE YGGA) - - - 0.00000000000000000000000000000000000000000000001414 178.0
MMD3_k127_4026686_8 Membrane - - - 0.000000000000000000000000001525 117.0
MMD3_k127_4026686_9 Protein of unknown function (DUF3187) - - - 0.0000000000000000000000294 111.0
MMD3_k127_4043050_0 belongs to the CobB CobQ family K13788 - 2.3.1.8 3.077e-211 668.0
MMD3_k127_4043050_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 556.0
MMD3_k127_4043050_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K09181,K15520 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0030551,GO:0030552,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.3.1.189 0.00000000000000000000000000000000000000000000007439 174.0
MMD3_k127_4046418_0 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 374.0
MMD3_k127_4046418_1 zinc ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
MMD3_k127_4046418_2 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000007695 160.0
MMD3_k127_4046418_3 competence protein - - - 0.000000000000000000000000000000000000000006191 161.0
MMD3_k127_4046418_4 Uncharacterized ACR, COG1678 - - - 0.000000000000000000000000000000000002333 148.0
MMD3_k127_4046418_5 Tetratricopeptide repeat-like domain - - - 0.00000000000000002904 91.0
MMD3_k127_4046418_6 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000002588 62.0
MMD3_k127_4046705_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1592.0
MMD3_k127_4046705_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 409.0
MMD3_k127_4046705_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 377.0
MMD3_k127_4046705_3 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 312.0
MMD3_k127_4046705_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 314.0
MMD3_k127_4046705_5 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K14090 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000007549 254.0
MMD3_k127_4046705_6 PFAM nickel-dependent hydrogenase, large subunit K00436 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000007826 213.0
MMD3_k127_4046705_7 4Fe-4S dicluster domain K14091 - - 0.00000000000000000000000000000000008439 138.0
MMD3_k127_4053864_0 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 409.0
MMD3_k127_4053864_1 Proto-chlorophyllide reductase 57 kD subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 372.0
MMD3_k127_4053864_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000003919 159.0
MMD3_k127_4064103_0 Multicopper oxidase - - - 9.981e-290 943.0
MMD3_k127_4064103_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 534.0
MMD3_k127_4064103_2 SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000005903 210.0
MMD3_k127_4064103_3 polysaccharide deacetylase - - - 0.000000000000000000003543 102.0
MMD3_k127_4064103_4 polysaccharide deacetylase - - - 0.0000000000001934 77.0
MMD3_k127_4073363_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 587.0
MMD3_k127_4073363_1 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 492.0
MMD3_k127_4073363_2 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000001711 201.0
MMD3_k127_4073363_3 Glutathione peroxidase - - - 0.0000000000000000000000000000000000816 140.0
MMD3_k127_4073363_4 HNH nucleases - - - 0.00000000000000000000000000000000223 131.0
MMD3_k127_4073363_5 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000001568 75.0
MMD3_k127_4074961_0 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 372.0
MMD3_k127_410848_0 phosphoglucosamine mutase activity K01835,K01840 - 5.4.2.2,5.4.2.8 1.945e-220 696.0
MMD3_k127_410848_1 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 574.0
MMD3_k127_410848_2 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 546.0
MMD3_k127_410848_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000009244 242.0
MMD3_k127_410848_4 cyclic diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000001724 222.0
MMD3_k127_410848_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000002542 126.0
MMD3_k127_410848_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000001946 122.0
MMD3_k127_410848_7 lyase activity - - - 0.000000000000000003111 97.0
MMD3_k127_410848_8 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000002679 72.0
MMD3_k127_4118265_0 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 500.0
MMD3_k127_4118265_1 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000000001067 213.0
MMD3_k127_4122672_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1287.0
MMD3_k127_4122672_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 491.0
MMD3_k127_4122672_2 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 316.0
MMD3_k127_4122672_3 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 325.0
MMD3_k127_4122672_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000021 270.0
MMD3_k127_4122672_5 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000003233 246.0
MMD3_k127_4125074_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 2.08e-210 663.0
MMD3_k127_4125074_1 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 511.0
MMD3_k127_4125074_2 TIGRFAM cysteine K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 424.0
MMD3_k127_4125074_3 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000001143 120.0
MMD3_k127_4125074_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000001372 117.0
MMD3_k127_4125074_5 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000001508 113.0
MMD3_k127_4125074_7 Evidence 4 Homologs of previously reported genes of - - - 0.00000000003725 65.0
MMD3_k127_4125074_9 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.00001757 54.0
MMD3_k127_4126713_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.0 1077.0
MMD3_k127_4126713_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 401.0
MMD3_k127_4126713_2 2Fe-2S -binding domain K13483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000515 276.0
MMD3_k127_4126713_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000002985 237.0
MMD3_k127_4126713_4 transposition K07497 - - 0.00000000000000000000000000009488 122.0
MMD3_k127_4126713_5 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000006832 105.0
MMD3_k127_413093_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002611 256.0
MMD3_k127_413093_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.0000000000000000000000000000000000000004419 157.0
MMD3_k127_413093_2 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.00000000000000000000000000000003777 131.0
MMD3_k127_413093_3 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000004034 128.0
MMD3_k127_4137006_0 Domain of unknown function (DUF4139) - - - 1.843e-209 661.0
MMD3_k127_4137006_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 432.0
MMD3_k127_4137006_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 300.0
MMD3_k127_4137006_3 cobalamin-transporting ATPase activity K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 308.0
MMD3_k127_4137006_4 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000000000000001733 232.0
MMD3_k127_4137006_5 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000001601 195.0
MMD3_k127_4137006_6 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000006954 177.0
MMD3_k127_4137006_7 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000002012 166.0
MMD3_k127_4137006_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000003234 73.0
MMD3_k127_4137006_9 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000003686 51.0
MMD3_k127_4153496_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.269e-207 653.0
MMD3_k127_4153496_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 567.0
MMD3_k127_4153496_10 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000003816 198.0
MMD3_k127_4153496_11 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000004924 190.0
MMD3_k127_4153496_12 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000003401 158.0
MMD3_k127_4153496_13 - - - - 0.000000000000000000000000000000000000001039 153.0
MMD3_k127_4153496_14 Tetratricopeptide repeat - - - 0.000000000000000000000001796 104.0
MMD3_k127_4153496_15 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000000000005158 88.0
MMD3_k127_4153496_16 AhpC/TSA family K03386 - 1.11.1.15 0.00000000000000009947 81.0
MMD3_k127_4153496_17 - - - - 0.00009822 47.0
MMD3_k127_4153496_2 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 464.0
MMD3_k127_4153496_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 422.0
MMD3_k127_4153496_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 342.0
MMD3_k127_4153496_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 291.0
MMD3_k127_4153496_6 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009559 241.0
MMD3_k127_4153496_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000001059 209.0
MMD3_k127_4153496_8 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000009436 211.0
MMD3_k127_4153496_9 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000246 204.0
MMD3_k127_4165258_0 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 1.863e-237 741.0
MMD3_k127_4165258_1 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 599.0
MMD3_k127_4165258_2 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588,K04037,K11333 - 1.18.6.1,1.3.7.14,1.3.7.15,1.3.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 475.0
MMD3_k127_4165258_3 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006421 433.0
MMD3_k127_4165258_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 286.0
MMD3_k127_4165258_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000001607 177.0
MMD3_k127_4165258_6 Protein of unknown function (DUF2400) - - - 0.0000000000000008412 79.0
MMD3_k127_4170029_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1034.0
MMD3_k127_4170029_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.037e-272 857.0
MMD3_k127_4170029_10 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 336.0
MMD3_k127_4170029_11 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008246 290.0
MMD3_k127_4170029_12 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000005017 241.0
MMD3_k127_4170029_13 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000001689 174.0
MMD3_k127_4170029_14 Adenylylsulphate kinase K00860 - 2.7.1.25 0.000000000000000000000000000000000000000003605 160.0
MMD3_k127_4170029_15 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000002598 148.0
MMD3_k127_4170029_16 Transcriptional regulator, MerR family - - - 0.00000000000000000000000000000000004051 139.0
MMD3_k127_4170029_17 Addiction module toxin, RelE StbE family - - - 0.00000000000000000000000001242 111.0
MMD3_k127_4170029_18 PFAM Transglycosylase-associated protein - - - 0.000000000000000000000002101 104.0
MMD3_k127_4170029_19 PFAM GAF domain protein - - - 0.00000000000000000000002537 116.0
MMD3_k127_4170029_2 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 2.359e-244 777.0
MMD3_k127_4170029_20 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000429 97.0
MMD3_k127_4170029_21 Tyrosine phosphatase family - - - 0.00000000000000000007426 97.0
MMD3_k127_4170029_22 PAS domain - - - 0.0000000000000000007696 102.0
MMD3_k127_4170029_24 Transcriptional regulator - - - 0.0000000000000002669 82.0
MMD3_k127_4170029_25 Domain of unknown function DUF302 - - - 0.0000000000000003322 85.0
MMD3_k127_4170029_27 cheY-homologous receiver domain - - - 0.0000002876 64.0
MMD3_k127_4170029_28 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0009868 47.0
MMD3_k127_4170029_3 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 614.0
MMD3_k127_4170029_4 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 595.0
MMD3_k127_4170029_5 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 588.0
MMD3_k127_4170029_6 PLD-like domain K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 565.0
MMD3_k127_4170029_7 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 440.0
MMD3_k127_4170029_8 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 445.0
MMD3_k127_4170029_9 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 341.0
MMD3_k127_4209981_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 345.0
MMD3_k127_4209981_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001037 272.0
MMD3_k127_4209981_2 Metal-dependent phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002043 253.0
MMD3_k127_4209981_3 cytochrome complex assembly - - - 0.000000000000000000000000000000000000000000000000000000000000000000007131 243.0
MMD3_k127_4209981_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000003528 198.0
MMD3_k127_4209981_5 cytochrome c biogenesis protein - - - 0.0000000000000000000000000000000000000000000000283 179.0
MMD3_k127_4209981_6 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000188 147.0
MMD3_k127_4209981_7 Outer membrane lipoprotein - - - 0.000000000000000000000000000000000002285 151.0
MMD3_k127_4217162_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 2.107e-233 731.0
MMD3_k127_4217162_1 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 9.76e-196 631.0
MMD3_k127_4217162_10 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000006505 210.0
MMD3_k127_4217162_11 Peptidase S24-like K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000003361 211.0
MMD3_k127_4217162_12 protein conserved in bacteria - - - 0.0000000000000000000000009309 108.0
MMD3_k127_4217162_13 COG COG0589 Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms - - - 0.00000000000000000003025 101.0
MMD3_k127_4217162_14 PIN domain - - - 0.00000000000000000191 91.0
MMD3_k127_4217162_15 Type II secretion system protein B K02451 - - 0.00000000000000007276 89.0
MMD3_k127_4217162_16 Transposase - - - 0.000000008589 59.0
MMD3_k127_4217162_18 - - - - 0.0001427 51.0
MMD3_k127_4217162_19 toxin-antitoxin pair type II binding - - - 0.0004795 46.0
MMD3_k127_4217162_2 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 621.0
MMD3_k127_4217162_3 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 480.0
MMD3_k127_4217162_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 475.0
MMD3_k127_4217162_5 SMART AAA ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 390.0
MMD3_k127_4217162_6 HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide K12138,K12139,K15829 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0033554,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 337.0
MMD3_k127_4217162_7 Transcriptional regulatory protein, C terminal K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004064 278.0
MMD3_k127_4217162_8 hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005894 243.0
MMD3_k127_4217162_9 PFAM NADH Ubiquinone - - - 0.00000000000000000000000000000000000000000000000000000000000000000001222 237.0
MMD3_k127_4223081_0 Heat shock 70 kDa protein K04043 - - 0.0 1019.0
MMD3_k127_4223081_1 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 539.0
MMD3_k127_4223081_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000006442 150.0
MMD3_k127_4223081_11 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0001073 46.0
MMD3_k127_4223081_12 Polyketide cyclase / dehydrase and lipid transport - - - 0.0003865 49.0
MMD3_k127_4223081_2 diaminopimelate decarboxylase activity K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 494.0
MMD3_k127_4223081_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 425.0
MMD3_k127_4223081_4 spermidine synthase activity K00797 GO:0003674,GO:0003824,GO:0004766,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 408.0
MMD3_k127_4223081_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 372.0
MMD3_k127_4223081_6 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 363.0
MMD3_k127_4223081_7 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 310.0
MMD3_k127_4223081_8 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001309 244.0
MMD3_k127_4223081_9 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000008382 216.0
MMD3_k127_4228716_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009004 427.0
MMD3_k127_4228716_1 Putative bacterial lipoprotein (DUF799) - - - 0.000000000000000000000000000000000000000000000000000000000000001251 224.0
MMD3_k127_4228716_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000001941 223.0
MMD3_k127_4228716_3 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000002582 147.0
MMD3_k127_4277069_0 phenylalanine-tRNA ligase activity K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 428.0
MMD3_k127_4277069_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008177 313.0
MMD3_k127_4277069_2 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000001066 206.0
MMD3_k127_4277069_3 - - - - 0.0000000000000000000003947 101.0
MMD3_k127_4277069_4 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.000000000000000000005991 92.0
MMD3_k127_4277069_5 mercury ion transmembrane transporter activity K07213 - - 0.0000000000000003571 81.0
MMD3_k127_4277359_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 415.0
MMD3_k127_4277359_1 Formyl transferase - - - 0.00000000000000000000000000000000000001038 156.0
MMD3_k127_4277359_2 Polysaccharide deacetylase - - - 0.0000000003077 72.0
MMD3_k127_42801_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 0.0 1099.0
MMD3_k127_42801_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 321.0
MMD3_k127_42801_2 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247,K03660 - 3.2.2.21,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 314.0
MMD3_k127_42801_3 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002655 235.0
MMD3_k127_42801_4 DoxX K15977 - - 0.000000000000000000000000000000000000000000000000000008338 193.0
MMD3_k127_42801_5 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000004467 165.0
MMD3_k127_42801_6 Histidine kinase - - - 0.0000000000000000000000000000000001062 137.0
MMD3_k127_42801_7 Cytochrome C oxidase, cbb3-type, subunit III K08906 - - 0.000000000000000000002437 97.0
MMD3_k127_42801_8 - - - - 0.00000007723 56.0
MMD3_k127_4283007_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 1.18e-253 803.0
MMD3_k127_4283007_1 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 346.0
MMD3_k127_4283007_2 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001262 248.0
MMD3_k127_4283007_3 PFAM Metal-dependent phosphohydrolase, HD K07141 - 2.7.7.76 0.0000000000000000000000000000002785 129.0
MMD3_k127_4283007_4 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000002753 52.0
MMD3_k127_4357102_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.04e-294 923.0
MMD3_k127_4357102_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 587.0
MMD3_k127_4357102_2 phosphoesterase RecJ domain protein K06881 GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000006147 254.0
MMD3_k127_4357102_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000006386 230.0
MMD3_k127_4357102_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000002581 146.0
MMD3_k127_4357102_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000001637 94.0
MMD3_k127_4357102_6 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000001155 79.0
MMD3_k127_4357102_7 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00000000000003962 78.0
MMD3_k127_4359098_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 386.0
MMD3_k127_4359098_1 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000001948 243.0
MMD3_k127_4359098_2 - - - - 0.00000000000000000003723 91.0
MMD3_k127_4373924_0 Putative zinc binding domain - - - 6.17e-216 676.0
MMD3_k127_4373924_1 Domain of unknown function (DUF2172) - - - 8.425e-216 677.0
MMD3_k127_4373924_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000009697 260.0
MMD3_k127_4373924_3 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
MMD3_k127_4373924_4 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000008663 192.0
MMD3_k127_4378579_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 531.0
MMD3_k127_4378579_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 313.0
MMD3_k127_4378579_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 308.0
MMD3_k127_4378579_3 Sporulation and spore germination - - - 0.00000000000000002305 89.0
MMD3_k127_4378579_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000001732 85.0
MMD3_k127_4405324_0 Beta-lactamase - - - 8.346e-268 846.0
MMD3_k127_4405324_1 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 489.0
MMD3_k127_4405324_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 418.0
MMD3_k127_4405324_3 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 341.0
MMD3_k127_4405324_4 PhoQ Sensor K07640 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 336.0
MMD3_k127_4405324_5 Bacterial regulatory proteins, crp family - - - 0.000000000000000000000000000000000000000000000822 174.0
MMD3_k127_4405324_6 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.00002191 47.0
MMD3_k127_4416573_0 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 1.788e-290 914.0
MMD3_k127_4416573_1 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 307.0
MMD3_k127_4416573_10 Pas domain - - - 0.00000001047 64.0
MMD3_k127_4416573_2 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 298.0
MMD3_k127_4416573_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000005798 250.0
MMD3_k127_4416573_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000005746 185.0
MMD3_k127_4416573_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000002765 165.0
MMD3_k127_4416573_6 - - - - 0.000000000000000000000000000000000000001761 154.0
MMD3_k127_4416573_7 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000002173 126.0
MMD3_k127_4416573_8 ADP binding K01768 - 4.6.1.1 0.0000000000000000000001808 108.0
MMD3_k127_4416573_9 - - - - 0.0000000000000000000006935 105.0
MMD3_k127_4453176_0 Glucodextranase, domain N K01178 - 3.2.1.3 2.54e-231 726.0
MMD3_k127_4453176_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 - 3.6.3.6 0.0000000000000000000000000002584 116.0
MMD3_k127_4513107_0 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007569 270.0
MMD3_k127_4513107_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000001686 250.0
MMD3_k127_4513107_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000001135 197.0
MMD3_k127_4513107_3 Uncharacterized protein conserved in bacteria (DUF2064) K09931,K20742 - 3.4.14.13 0.0000000000000000000000000000000000000003665 156.0
MMD3_k127_4521201_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.745e-254 797.0
MMD3_k127_4521201_1 Glycosyl transferase family group 2 K00752,K11936 - 2.4.1.212 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 464.0
MMD3_k127_4521201_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 454.0
MMD3_k127_4521201_3 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 317.0
MMD3_k127_4521201_4 - - - - 0.0000000000000000000000000000000000001206 149.0
MMD3_k127_4521201_5 PFAM Rhodanese domain protein - - - 0.000000000003185 73.0
MMD3_k127_4521201_6 OmpA family - - - 0.000002746 49.0
MMD3_k127_45327_0 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 609.0
MMD3_k127_45327_1 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 337.0
MMD3_k127_4538251_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 552.0
MMD3_k127_4538251_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 516.0
MMD3_k127_4538251_10 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 347.0
MMD3_k127_4538251_11 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000001983 244.0
MMD3_k127_4538251_12 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000007565 225.0
MMD3_k127_4538251_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589,K06438 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0040007,GO:0042802,GO:0043093,GO:0044085,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.00000000000000000000000000000004046 136.0
MMD3_k127_4538251_14 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000331 109.0
MMD3_k127_4538251_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 466.0
MMD3_k127_4538251_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 454.0
MMD3_k127_4538251_4 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 399.0
MMD3_k127_4538251_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 399.0
MMD3_k127_4538251_6 Cell cycle protein K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 394.0
MMD3_k127_4538251_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 390.0
MMD3_k127_4538251_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 381.0
MMD3_k127_4538251_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 360.0
MMD3_k127_4541277_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1487.0
MMD3_k127_4541277_1 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0 1172.0
MMD3_k127_4541277_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700,K01236 - 2.4.1.18,3.2.1.141 1.889e-234 743.0
MMD3_k127_4541277_3 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 598.0
MMD3_k127_4541277_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 500.0
MMD3_k127_4541277_5 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 349.0
MMD3_k127_4541277_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001213 271.0
MMD3_k127_4567436_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1274.0
MMD3_k127_4567436_1 L,D-transpeptidase catalytic domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 605.0
MMD3_k127_4567436_10 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 367.0
MMD3_k127_4567436_11 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 371.0
MMD3_k127_4567436_12 Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid K00627,K05714,K10216,K10222,K10623 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0018771,GO:0019439,GO:0019622,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046164,GO:0046395,GO:0046435,GO:0052823,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 2.3.1.12,3.7.1.14,3.7.1.8,3.7.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 347.0
MMD3_k127_4567436_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 321.0
MMD3_k127_4567436_14 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001815 280.0
MMD3_k127_4567436_15 binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003659 259.0
MMD3_k127_4567436_16 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007366 246.0
MMD3_k127_4567436_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003464 249.0
MMD3_k127_4567436_18 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.000000000000000000000000000000000000000000000000000000000004468 216.0
MMD3_k127_4567436_19 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000000000000000000000000000000000006889 171.0
MMD3_k127_4567436_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 591.0
MMD3_k127_4567436_20 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000001004 150.0
MMD3_k127_4567436_21 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000004636 131.0
MMD3_k127_4567436_22 Membrane - - - 0.00000000000000000000008067 104.0
MMD3_k127_4567436_23 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000000000006793 104.0
MMD3_k127_4567436_24 Alanine-zipper, major outer membrane lipoprotein - - - 0.0000000000003333 74.0
MMD3_k127_4567436_26 Predicted metal-binding protein (DUF2284) - - - 0.0000001526 62.0
MMD3_k127_4567436_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 570.0
MMD3_k127_4567436_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 479.0
MMD3_k127_4567436_5 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 444.0
MMD3_k127_4567436_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 429.0
MMD3_k127_4567436_7 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 408.0
MMD3_k127_4567436_8 PFAM Metallophosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 388.0
MMD3_k127_4567436_9 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 385.0
MMD3_k127_4574360_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 349.0
MMD3_k127_4574360_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 288.0
MMD3_k127_4574360_2 Belongs to the Fur family K09825 - - 0.0000000000000000000004375 96.0
MMD3_k127_4574488_0 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 337.0
MMD3_k127_4574488_1 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 321.0
MMD3_k127_4574488_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000001033 164.0
MMD3_k127_4574488_3 PFAM response regulator receiver - - - 0.000000000000000003233 89.0
MMD3_k127_4585932_0 PFAM ABC transporter K01990,K01992,K09695 - - 3.662e-244 768.0
MMD3_k127_4585932_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 507.0
MMD3_k127_4585932_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 491.0
MMD3_k127_4585932_3 PFAM secretion protein HlyD family protein K01993,K16922 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 349.0
MMD3_k127_4585932_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000005917 230.0
MMD3_k127_4585932_5 - - - - 0.0000000000000000000000000000000000000000000000000000000001062 209.0
MMD3_k127_4585932_6 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000354 204.0
MMD3_k127_4585932_7 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000006892 146.0
MMD3_k127_4585932_8 Cytochrome C oxidase, cbb3-type, subunit III K02305 - - 0.00000000000000001177 97.0
MMD3_k127_4585932_9 - K07092 - - 0.000003436 55.0
MMD3_k127_4597057_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 420.0
MMD3_k127_4597057_1 phosphorelay sensor kinase activity K03406,K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 321.0
MMD3_k127_4597057_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000004942 218.0
MMD3_k127_4597057_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.000006058 51.0
MMD3_k127_4603613_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.599e-211 663.0
MMD3_k127_4603613_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 379.0
MMD3_k127_4603613_10 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000875 231.0
MMD3_k127_4603613_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000007498 214.0
MMD3_k127_4603613_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000277 204.0
MMD3_k127_4603613_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001682 199.0
MMD3_k127_4603613_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000529 198.0
MMD3_k127_4603613_15 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000001132 183.0
MMD3_k127_4603613_16 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000001844 177.0
MMD3_k127_4603613_17 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000004257 174.0
MMD3_k127_4603613_18 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000009531 167.0
MMD3_k127_4603613_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000006982 155.0
MMD3_k127_4603613_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 358.0
MMD3_k127_4603613_20 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000007174 158.0
MMD3_k127_4603613_21 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000143 143.0
MMD3_k127_4603613_22 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000002832 143.0
MMD3_k127_4603613_23 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.0000000000000000000000000000000005248 131.0
MMD3_k127_4603613_24 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000001007 134.0
MMD3_k127_4603613_25 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000001705 110.0
MMD3_k127_4603613_26 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001516 108.0
MMD3_k127_4603613_27 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000006367 93.0
MMD3_k127_4603613_28 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000008324 79.0
MMD3_k127_4603613_29 Ribosomal protein L36 K02919 - - 0.0000000000000001339 79.0
MMD3_k127_4603613_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 337.0
MMD3_k127_4603613_30 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000006977 73.0
MMD3_k127_4603613_31 Ribosomal protein L30p/L7e K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000006327 59.0
MMD3_k127_4603613_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 329.0
MMD3_k127_4603613_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 292.0
MMD3_k127_4603613_6 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 291.0
MMD3_k127_4603613_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001785 274.0
MMD3_k127_4603613_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006515 229.0
MMD3_k127_4603613_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000008023 229.0
MMD3_k127_4634123_0 Glycosyl hydrolase family 3 N terminal domain K01207,K05349 - 3.2.1.21,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000002819 229.0
MMD3_k127_4634123_1 3-Beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.0000000000000000000000005407 116.0
MMD3_k127_4638387_0 type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 571.0
MMD3_k127_4638387_1 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 377.0
MMD3_k127_4638387_2 Glycosyl transferase, family 2 K12992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 312.0
MMD3_k127_4638387_3 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.000000000002196 67.0
MMD3_k127_4638387_4 Prokaryotic N-terminal methylation motif - - - 0.000000001218 67.0
MMD3_k127_4638387_5 General secretion pathway protein H K02457 - - 0.00000001588 63.0
MMD3_k127_4638503_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1197.0
MMD3_k127_4638503_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 301.0
MMD3_k127_4638503_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007746 260.0
MMD3_k127_4639476_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 573.0
MMD3_k127_4649109_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 504.0
MMD3_k127_4649109_1 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 328.0
MMD3_k127_4649109_2 PFAM PQ loop repeat K15383 - - 0.00000000000000000000000009526 110.0
MMD3_k127_4651053_0 Telomere recombination K04656 - - 2.671e-245 780.0
MMD3_k127_4651053_1 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 467.0
MMD3_k127_4651053_2 AIR synthase related protein, N-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 311.0
MMD3_k127_4656837_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1028.0
MMD3_k127_4656837_1 Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 375.0
MMD3_k127_4656837_2 phosphatase activity K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 296.0
MMD3_k127_4656837_3 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000001727 255.0
MMD3_k127_4656837_4 denitrification pathway K02569,K15876 - - 0.000000000000000000000000000000000000000000000001047 186.0
MMD3_k127_4656837_5 Peptidase M15 K02395 - - 0.00000000000000000000000000000002655 130.0
MMD3_k127_4656837_6 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000004593 89.0
MMD3_k127_4656837_7 - - - - 0.0000000000000000008024 93.0
MMD3_k127_4656837_8 Ferredoxin K05337 - - 0.000000000000000005576 85.0
MMD3_k127_4656837_9 SEC-C Motif Domain Protein - - - 0.0000000000005623 77.0
MMD3_k127_4664310_0 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 534.0
MMD3_k127_4664310_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 523.0
MMD3_k127_4664310_10 - - - - 0.000000000000000000000000000000000000000000002002 168.0
MMD3_k127_4664310_11 Universal stress protein family K07090 - - 0.000000000000000000000000000002726 125.0
MMD3_k127_4664310_12 UTRA K03710 - - 0.000000000000000000000000000002992 129.0
MMD3_k127_4664310_13 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0000000000000000000001511 101.0
MMD3_k127_4664310_14 - - - - 0.000000000000001318 79.0
MMD3_k127_4664310_15 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0009664 49.0
MMD3_k127_4664310_2 Belongs to the DEAD box helicase family K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 497.0
MMD3_k127_4664310_3 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 458.0
MMD3_k127_4664310_4 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 418.0
MMD3_k127_4664310_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 389.0
MMD3_k127_4664310_6 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 329.0
MMD3_k127_4664310_7 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 288.0
MMD3_k127_4664310_8 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000003066 240.0
MMD3_k127_4664310_9 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000739 218.0
MMD3_k127_4664872_0 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 511.0
MMD3_k127_4664872_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 379.0
MMD3_k127_4664872_10 - - - - 0.0000000000000000000000000001039 123.0
MMD3_k127_4664872_11 Alkylmercury lyase - - - 0.000000000000000000000000001035 112.0
MMD3_k127_4664872_12 Protein of unknown function (DUF3641) - - - 0.00000000000000000000008952 98.0
MMD3_k127_4664872_2 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 372.0
MMD3_k127_4664872_3 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 332.0
MMD3_k127_4664872_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 320.0
MMD3_k127_4664872_5 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007532 278.0
MMD3_k127_4664872_6 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001855 270.0
MMD3_k127_4664872_7 Papain-like cysteine protease AvrRpt2 - - - 0.00000000000000000000000000000000000000000004625 165.0
MMD3_k127_4664872_8 Alkylmercury lyase - - - 0.000000000000000000000000000000000000000004885 157.0
MMD3_k127_4680377_0 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 392.0
MMD3_k127_4680377_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 341.0
MMD3_k127_4680377_2 Cytochrome b/b6/petB K00412,K03888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 335.0
MMD3_k127_4680377_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000007689 231.0
MMD3_k127_4680377_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000565 205.0
MMD3_k127_4680377_5 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000287 177.0
MMD3_k127_4680377_6 NADH dehydrogenase (ubiquinone) activity K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000000000000000000008879 166.0
MMD3_k127_4680377_7 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000000000000002928 149.0
MMD3_k127_4680377_8 Universal stress protein family - - - 0.000000000000000000000000000000000002749 143.0
MMD3_k127_470879_0 Part of a membrane complex involved in electron transport K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 500.0
MMD3_k127_470879_1 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001906 266.0
MMD3_k127_4724133_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 591.0
MMD3_k127_4724133_1 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 566.0
MMD3_k127_4724133_2 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 404.0
MMD3_k127_4724133_3 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 379.0
MMD3_k127_4724133_4 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 343.0
MMD3_k127_4724133_5 Histidine kinase HAMP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006681 263.0
MMD3_k127_4724133_6 NmrA-like family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000007727 210.0
MMD3_k127_4724133_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000007546 141.0
MMD3_k127_4724133_8 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000002993 83.0
MMD3_k127_4729925_0 Putative Fe-S cluster K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 310.0
MMD3_k127_4729925_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000002235 214.0
MMD3_k127_4729925_2 Peptidase S24-like K01356 - 3.4.21.88 0.0000000007808 64.0
MMD3_k127_4749133_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 2.714e-234 731.0
MMD3_k127_4749133_1 GAF domain K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 565.0
MMD3_k127_4749133_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 464.0
MMD3_k127_4749133_3 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 453.0
MMD3_k127_4749133_4 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000001047 246.0
MMD3_k127_4749133_5 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000001127 190.0
MMD3_k127_4749133_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000001311 200.0
MMD3_k127_4749133_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088 - - 0.00000000000002548 73.0
MMD3_k127_4772147_0 FtsX-like permease family K02004 - - 1.962e-318 994.0
MMD3_k127_4772147_1 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 407.0
MMD3_k127_4772147_2 response regulator receiver K02481,K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 404.0
MMD3_k127_4772147_3 Domains HAMP, HisKA, HATPase_c, REC K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 369.0
MMD3_k127_4772147_4 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002831 245.0
MMD3_k127_4772147_5 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000001294 216.0
MMD3_k127_4772147_6 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000001169 184.0
MMD3_k127_4772147_7 ABC transporter substrate binding protein - - - 0.000000000000000000000001314 114.0
MMD3_k127_4772147_8 Autoinducer binding domain K20334 - - 0.00000000000000004867 83.0
MMD3_k127_4778536_0 domain, Protein K12373 - 3.2.1.52 0.0 1217.0
MMD3_k127_4778536_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 350.0
MMD3_k127_4778536_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 283.0
MMD3_k127_4778536_4 PFAM HPP family K07168 - - 0.000000000000000000000000000000005874 128.0
MMD3_k127_4778536_5 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000002493 108.0
MMD3_k127_4778536_6 Predicted membrane protein (DUF2318) - - - 0.00000000000006543 78.0
MMD3_k127_4778536_7 - - - - 0.00000007819 61.0
MMD3_k127_4778536_8 peroxiredoxin activity - - - 0.0003039 45.0
MMD3_k127_4785732_0 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 442.0
MMD3_k127_4785732_1 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 303.0
MMD3_k127_4785732_2 Oligopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005381 277.0
MMD3_k127_4785732_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002197 232.0
MMD3_k127_4785732_4 PFAM Acetyl-CoA hydrolase transferase K18122 - - 0.000000000000000000000003718 104.0
MMD3_k127_4819552_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 540.0
MMD3_k127_4819552_1 Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate K15527 - 2.5.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 359.0
MMD3_k127_4819552_2 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit K08264 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 325.0
MMD3_k127_4819552_3 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 310.0
MMD3_k127_4831267_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 564.0
MMD3_k127_4831267_1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 486.0
MMD3_k127_4831267_2 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 463.0
MMD3_k127_4831267_3 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 347.0
MMD3_k127_4831267_4 TIGRFAM Tat (twin-arginine translocation) pathway signal sequence K00184 - - 0.0000000000000000000000000000000000000000000000000000000001926 204.0
MMD3_k127_4831267_5 Single-strand binding protein family K03111 - - 0.000000000000000000000000000000000000000000002283 167.0
MMD3_k127_4831267_6 Pyridoxamine 5'-phosphate oxidase like - - - 0.0000000000000000000000000000000000000001936 154.0
MMD3_k127_4831267_7 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000001979 111.0
MMD3_k127_4831267_8 4Fe-4S binding domain - - - 0.000000000000000001377 86.0
MMD3_k127_4831267_9 rRNA binding K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00005684 46.0
MMD3_k127_4856040_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 328.0
MMD3_k127_4856040_1 Lipid-A-disaccharide synthetase K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000008128 105.0
MMD3_k127_4872354_0 Phosphoglycerate kinase K00927 - 2.7.2.3 1.104e-200 631.0
MMD3_k127_4872354_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 501.0
MMD3_k127_4872354_10 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000000000006082 212.0
MMD3_k127_4872354_11 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000008349 94.0
MMD3_k127_4872354_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 469.0
MMD3_k127_4872354_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 471.0
MMD3_k127_4872354_4 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 427.0
MMD3_k127_4872354_5 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 358.0
MMD3_k127_4872354_6 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006165 276.0
MMD3_k127_4872354_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001748 240.0
MMD3_k127_4872354_8 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000133 231.0
MMD3_k127_4872354_9 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000001348 220.0
MMD3_k127_4890995_0 Type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000002662 249.0
MMD3_k127_4890995_1 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000000000000001434 206.0
MMD3_k127_4890995_2 Pilus assembly protein, PilO K02664 - - 0.0000000000000002072 87.0
MMD3_k127_4890995_3 Pilus assembly protein, PilP K02665 - - 0.000000000002048 74.0
MMD3_k127_4890995_4 PFAM Fimbrial assembly family protein K02663 - - 0.0000002412 59.0
MMD3_k127_4892995_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 312.0
MMD3_k127_4892995_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009561 263.0
MMD3_k127_4892995_2 Glycosyl transferase family group 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000002074 207.0
MMD3_k127_4892995_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000002057 112.0
MMD3_k127_4896865_0 Bacterial type II and III secretion system protein K02453,K03219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 325.0
MMD3_k127_4896865_1 serine threonine protein kinase - - - 0.0000000000000000000000000000001885 126.0
MMD3_k127_4896865_2 Universal stress protein family - - - 0.00000000000000000002422 96.0
MMD3_k127_4896865_3 PFAM Fimbrial assembly K02461 - - 0.000000007842 63.0
MMD3_k127_4930494_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.61e-242 758.0
MMD3_k127_4930494_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 9.718e-239 755.0
MMD3_k127_4930494_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.029e-234 735.0
MMD3_k127_4930494_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 474.0
MMD3_k127_4930494_4 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 318.0
MMD3_k127_4930494_5 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000003066 204.0
MMD3_k127_4930494_6 - - - - 0.000000000000000000000000000003017 124.0
MMD3_k127_4930494_7 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000009184 107.0
MMD3_k127_4943716_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1194.0
MMD3_k127_4943716_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 567.0
MMD3_k127_4943716_10 protein transport across the cell outer membrane K02457,K08084 - - 0.0000000000287 70.0
MMD3_k127_4943716_11 Pfam:N_methyl_2 K02671 - - 0.0000003293 58.0
MMD3_k127_4943716_2 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 548.0
MMD3_k127_4943716_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 436.0
MMD3_k127_4943716_4 PFAM PfkB K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 396.0
MMD3_k127_4943716_5 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000582 192.0
MMD3_k127_4943716_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000896 123.0
MMD3_k127_4943716_7 COG3209 Rhs family protein - - - 0.000000000000000000000000001705 123.0
MMD3_k127_4943716_8 - - - - 0.0000000000000000003214 96.0
MMD3_k127_4943716_9 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000001351 73.0
MMD3_k127_4982884_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 375.0
MMD3_k127_4982884_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.000000000000000000000000000000000000000000000000000000000000000000002378 237.0
MMD3_k127_4982884_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000003644 212.0
MMD3_k127_4982884_3 COGs COG0655 Multimeric flavodoxin WrbA - - - 0.000000000000000000000000000000000001314 144.0
MMD3_k127_4982884_4 PFAM NADPH-dependent FMN reductase - - - 0.00003261 50.0
MMD3_k127_5000446_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 475.0
MMD3_k127_5000446_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003811 283.0
MMD3_k127_5000446_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001933 263.0
MMD3_k127_5000446_3 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000001137 229.0
MMD3_k127_5000446_4 SMART Elongator protein 3 MiaB NifB - - - 0.00003002 48.0
MMD3_k127_5001373_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.85e-233 728.0
MMD3_k127_5001373_1 Protein of unknown function (DUF520) K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002038 276.0
MMD3_k127_5001373_2 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000132 217.0
MMD3_k127_5001373_3 Outer membrane protein beta-barrel domain K07275 - - 0.00000000000000000000000000000000000000000000000000000001839 202.0
MMD3_k127_5001373_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000004731 175.0
MMD3_k127_5002851_0 Belongs to the glycosyl hydrolase 13 family - - - 1.854e-262 818.0
MMD3_k127_5002851_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 577.0
MMD3_k127_5002851_10 PFAM phosphoesterase RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002977 238.0
MMD3_k127_5002851_11 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000007941 226.0
MMD3_k127_5002851_12 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000005029 208.0
MMD3_k127_5002851_13 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000002144 194.0
MMD3_k127_5002851_14 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000008688 129.0
MMD3_k127_5002851_15 cell redox homeostasis K03671 - - 0.000000000000239 75.0
MMD3_k127_5002851_16 Domain of unknown function (DUF4115) - - - 0.000000000001884 72.0
MMD3_k127_5002851_17 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.000000007581 59.0
MMD3_k127_5002851_2 Ammonium Transporter K03320 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 486.0
MMD3_k127_5002851_3 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 455.0
MMD3_k127_5002851_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 398.0
MMD3_k127_5002851_5 Phosphate transporter family K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 389.0
MMD3_k127_5002851_6 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 346.0
MMD3_k127_5002851_7 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 336.0
MMD3_k127_5002851_8 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 291.0
MMD3_k127_5002851_9 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002271 278.0
MMD3_k127_5045141_0 heme-copper terminal oxidase activity K02274 - 1.9.3.1 2.316e-235 737.0
MMD3_k127_5045141_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 333.0
MMD3_k127_5045141_2 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000001266 238.0
MMD3_k127_5045141_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000002416 135.0
MMD3_k127_5045141_4 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000004723 74.0
MMD3_k127_5045141_5 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0003415 46.0
MMD3_k127_5047383_0 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 8.465e-276 874.0
MMD3_k127_5047383_1 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098 481.0
MMD3_k127_5047383_2 CAAX prenyl protease N-terminal, five membrane helices - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 355.0
MMD3_k127_5047383_3 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000001224 176.0
MMD3_k127_5047383_4 Domain of unknown function (DUF3842) - - - 0.00000000000000000000000000000000000000000000004137 173.0
MMD3_k127_5047383_5 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000007907 109.0
MMD3_k127_5047383_6 Predicted RNA-binding protein - - - 0.000000000000000000005543 93.0
MMD3_k127_5047383_7 YopX protein - - - 0.0000005483 56.0
MMD3_k127_5075894_0 PFAM Acetyl-CoA hydrolase transferase K18122 - - 2.157e-258 805.0
MMD3_k127_5075894_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 3.688e-243 758.0
MMD3_k127_5075894_10 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000000000000000000000000000000000001676 162.0
MMD3_k127_5075894_11 Two component transcriptional regulator, winged helix family K18941 - - 0.00000000000000000000000000000000001413 137.0
MMD3_k127_5075894_12 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.000000000000000000000000000000000265 132.0
MMD3_k127_5075894_13 phosphorelay signal transduction system - - - 0.000000000000000000000000000000001377 138.0
MMD3_k127_5075894_14 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000003324 127.0
MMD3_k127_5075894_15 carbon dioxide binding K04653 - - 0.00000000000000000009652 93.0
MMD3_k127_5075894_16 Protein of unknown function (DUF1189) - - - 0.000000000000000009656 93.0
MMD3_k127_5075894_17 Cytochrome c - - - 0.0000000002074 66.0
MMD3_k127_5075894_2 Hydrogenase (NiFe) small subunit HydA K05927,K06282,K18008 - 1.12.2.1,1.12.5.1,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 503.0
MMD3_k127_5075894_3 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 411.0
MMD3_k127_5075894_4 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 403.0
MMD3_k127_5075894_5 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 400.0
MMD3_k127_5075894_6 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008145 362.0
MMD3_k127_5075894_7 Belongs to the acetyltransferase family. ArgA subfamily K00619,K14681 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000004032 228.0
MMD3_k127_5075894_8 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000001356 194.0
MMD3_k127_5075894_9 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000007983 171.0
MMD3_k127_5082432_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.209e-268 840.0
MMD3_k127_5082432_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 400.0
MMD3_k127_5082432_10 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000448 151.0
MMD3_k127_5082432_11 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000002953 135.0
MMD3_k127_5082432_12 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000001695 98.0
MMD3_k127_5082432_13 phosphinothricin N-acetyltransferase activity K03823 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 2.3.1.183 0.0000000001709 61.0
MMD3_k127_5082432_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 372.0
MMD3_k127_5082432_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 328.0
MMD3_k127_5082432_4 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000001086 230.0
MMD3_k127_5082432_5 CHASE K02488,K21009 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000002488 220.0
MMD3_k127_5082432_6 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000004364 201.0
MMD3_k127_5082432_7 lactoylglutathione lyase activity K01759,K08234 - 4.4.1.5 0.000000000000000000000000000000000000000000000000006769 183.0
MMD3_k127_5082432_8 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000007846 183.0
MMD3_k127_5082432_9 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000003909 155.0
MMD3_k127_537192_0 Peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 353.0
MMD3_k127_537192_1 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000001497 225.0
MMD3_k127_537192_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000004564 165.0
MMD3_k127_537192_3 DsrE/DsrF-like family K06039 - - 0.0007856 46.0
MMD3_k127_545081_0 Ribosomal protein L11 methyltransferase (PrmA) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000001555 173.0
MMD3_k127_545081_1 radical SAM domain protein - - - 0.00000000000000000000000000000000004308 145.0
MMD3_k127_545081_2 Polysulphide reductase, NrfD - - - 0.00000000000000000000001799 103.0
MMD3_k127_552671_0 Hydrophobe amphiphile Efflux-1 (HAE1) family K03296,K18138 - - 0.0 1633.0
MMD3_k127_552671_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1441.0
MMD3_k127_552671_2 HlyD membrane-fusion protein of T1SS K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 539.0
MMD3_k127_552671_3 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 392.0
MMD3_k127_552671_4 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 343.0
MMD3_k127_552671_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000253 254.0
MMD3_k127_552671_6 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0006667 44.0
MMD3_k127_56195_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 6.612e-287 902.0
MMD3_k127_56195_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 355.0
MMD3_k127_56195_10 Tetratricopeptide repeat - - - 0.00000000000000000001181 100.0
MMD3_k127_56195_11 Belongs to the UPF0235 family K09131 - - 0.000000000000003879 78.0
MMD3_k127_56195_12 Glutaredoxin - - - 0.00000001433 58.0
MMD3_k127_56195_14 - - - - 0.000002408 53.0
MMD3_k127_56195_15 Evidence 5 No homology to any previously reported sequences - - - 0.00004859 54.0
MMD3_k127_56195_2 Histidine kinase K07641,K07642,K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002257 279.0
MMD3_k127_56195_3 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007785 253.0
MMD3_k127_56195_4 PFAM response regulator receiver K02483,K18344 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001079 249.0
MMD3_k127_56195_5 chlorophyll binding K03286,K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000005889 181.0
MMD3_k127_56195_6 peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000000000000000000002583 159.0
MMD3_k127_56195_7 photoreceptor activity K02490 - - 0.0000000000000000000000000000000003084 132.0
MMD3_k127_56195_8 RNA-binding protein containing a PIN domain K06962 - - 0.00000000000000000000000000007466 123.0
MMD3_k127_56195_9 PFAM FG-GAP repeat protein - - - 0.00000000000000000000007438 114.0
MMD3_k127_563170_0 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 552.0
MMD3_k127_563170_1 Actin K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 517.0
MMD3_k127_563170_2 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 456.0
MMD3_k127_563170_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 289.0
MMD3_k127_566035_0 COG3387 Glucoamylase and related glycosyl hydrolases K01178 - 3.2.1.3 3.772e-227 719.0
MMD3_k127_566035_1 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 1.071e-212 665.0
MMD3_k127_566035_10 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000004287 56.0
MMD3_k127_566035_2 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 572.0
MMD3_k127_566035_3 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 464.0
MMD3_k127_566035_4 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 295.0
MMD3_k127_566035_5 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000003659 244.0
MMD3_k127_566035_6 Protein of unknown function (DUF1460) - - - 0.000000000000000000000000000000000000000000000000000000000000000007947 234.0
MMD3_k127_566035_7 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000006279 181.0
MMD3_k127_566035_8 Protein of unknown function (DUF4019) - - - 0.000000000000000000000000000000000000000004072 158.0
MMD3_k127_566035_9 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0000004184 62.0
MMD3_k127_574797_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 1.056e-234 732.0
MMD3_k127_574797_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 516.0
MMD3_k127_574797_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006955 498.0
MMD3_k127_574797_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 406.0
MMD3_k127_574797_4 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 389.0
MMD3_k127_574797_5 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 325.0
MMD3_k127_574797_6 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 301.0
MMD3_k127_574797_7 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000007543 231.0
MMD3_k127_574797_8 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000005733 213.0
MMD3_k127_588393_0 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002311 287.0
MMD3_k127_588393_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000001396 138.0
MMD3_k127_588393_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000002176 73.0
MMD3_k127_592369_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 452.0
MMD3_k127_592369_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 316.0
MMD3_k127_592369_10 TIGRFAM alkylhydroperoxidase like protein, AhpD family - - - 0.00000000000007695 79.0
MMD3_k127_592369_11 PGAP1-like protein - - - 0.00000009104 63.0
MMD3_k127_592369_2 growth of symbiont in host cell K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007111 257.0
MMD3_k127_592369_3 B-1 B cell differentiation - - - 0.00000000000000000000000000000000000000000000000000008049 194.0
MMD3_k127_592369_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000002407 170.0
MMD3_k127_592369_5 YceI-like domain - - - 0.00000000000000000000000000000000000000004715 158.0
MMD3_k127_592369_6 - - - - 0.000000000000000000000000008898 110.0
MMD3_k127_592369_7 Membrane - - - 0.00000000000000000000000001078 116.0
MMD3_k127_592369_8 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000000000000000003748 104.0
MMD3_k127_597305_0 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 2.206e-197 621.0
MMD3_k127_597305_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 321.0
MMD3_k127_597305_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 254.0
MMD3_k127_597305_3 FtsX-like permease family - - - 0.00000000001198 64.0
MMD3_k127_612876_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 1.669e-211 693.0
MMD3_k127_612876_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 570.0
MMD3_k127_612876_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000003101 211.0
MMD3_k127_624791_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 522.0
MMD3_k127_624791_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 421.0
MMD3_k127_637252_0 Iron-containing alcohol dehydrogenase K13954 - 1.1.1.1 9.631e-198 624.0
MMD3_k127_637252_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 557.0
MMD3_k127_637252_10 methyltransferase activity - - - 0.00000000000000000000000000000000000000003216 159.0
MMD3_k127_637252_11 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000876 154.0
MMD3_k127_637252_14 signal transduction protein with EFhand domain - - - 0.0006317 43.0
MMD3_k127_637252_2 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 524.0
MMD3_k127_637252_3 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 443.0
MMD3_k127_637252_4 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 334.0
MMD3_k127_637252_5 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001031 295.0
MMD3_k127_637252_6 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002421 252.0
MMD3_k127_637252_7 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000002698 231.0
MMD3_k127_637252_8 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000008171 220.0
MMD3_k127_637252_9 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000001999 181.0
MMD3_k127_644685_0 Chain length determinant protein K16554 - - 6.771e-213 683.0
MMD3_k127_644685_1 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 550.0
MMD3_k127_644685_2 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000004431 70.0
MMD3_k127_652251_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 409.0
MMD3_k127_652251_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 301.0
MMD3_k127_652251_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001738 268.0
MMD3_k127_652251_3 Polyprenyl synthetase K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000002366 239.0
MMD3_k127_652251_4 ferrous iron binding K06990,K09141 - - 0.00000000000000000000000000000000000000000000000000000000001059 213.0
MMD3_k127_652251_5 heat shock protein binding - - - 0.00000000000000000000000009289 122.0
MMD3_k127_652251_6 response regulator - - - 0.00000000000000000000006478 101.0
MMD3_k127_652251_8 cheY-homologous receiver domain - - - 0.000000002196 67.0
MMD3_k127_652251_9 heat shock protein binding K03686 - - 0.0000001643 64.0
MMD3_k127_657300_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 8.187e-218 683.0
MMD3_k127_657300_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 479.0
MMD3_k127_657300_10 Cytochrome c K16966,K17049,K17052 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000001973 191.0
MMD3_k127_657300_11 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000003115 165.0
MMD3_k127_657300_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 472.0
MMD3_k127_657300_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 473.0
MMD3_k127_657300_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 411.0
MMD3_k127_657300_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 386.0
MMD3_k127_657300_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 385.0
MMD3_k127_657300_7 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 306.0
MMD3_k127_657300_8 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000003138 213.0
MMD3_k127_657300_9 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000128 184.0
MMD3_k127_665880_0 UvrD-like helicase C-terminal domain K03656,K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009067 607.0
MMD3_k127_665880_1 Bacterial regulatory protein, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 527.0
MMD3_k127_665880_10 - - - - 0.0000000000000000000000000000000000000000000637 162.0
MMD3_k127_665880_11 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000004116 156.0
MMD3_k127_665880_12 part of a sulfur-relay system K11179 - - 0.00000000000000000000000001185 111.0
MMD3_k127_665880_14 PFAM Phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.000000000000000000000002083 105.0
MMD3_k127_665880_15 Copper resistance protein CopZ K07213 - - 0.00004319 48.0
MMD3_k127_665880_2 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 521.0
MMD3_k127_665880_3 GHKL domain K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007763 509.0
MMD3_k127_665880_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 321.0
MMD3_k127_665880_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000004287 256.0
MMD3_k127_665880_6 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001288 256.0
MMD3_k127_665880_7 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000007759 196.0
MMD3_k127_665880_8 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000002386 172.0
MMD3_k127_665880_9 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000001324 164.0
MMD3_k127_676809_0 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 507.0
MMD3_k127_676809_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 505.0
MMD3_k127_676809_2 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 370.0
MMD3_k127_676809_3 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 339.0
MMD3_k127_676809_4 PFAM Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 306.0
MMD3_k127_676809_5 PFAM GCN5-related N-acetyltransferase K03824 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 296.0
MMD3_k127_676809_6 LemA family K03744 - - 0.00000002535 55.0
MMD3_k127_686718_0 Protein conserved in bacteria - - - 1.595e-226 729.0
MMD3_k127_686718_1 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 599.0
MMD3_k127_686718_10 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.00000000000000000000000000003093 119.0
MMD3_k127_686718_11 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000122 100.0
MMD3_k127_686718_13 - - - - 0.000000000000000000009778 94.0
MMD3_k127_686718_14 Regulatory protein, FmdB family - - - 0.000000000000000000009978 93.0
MMD3_k127_686718_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 364.0
MMD3_k127_686718_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 342.0
MMD3_k127_686718_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 312.0
MMD3_k127_686718_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 296.0
MMD3_k127_686718_6 TIGRFAM TIGR00268 family protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005924 278.0
MMD3_k127_686718_7 Tetratricopeptide repeat K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001712 251.0
MMD3_k127_686718_8 lactate metabolic process K11473,K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000007339 241.0
MMD3_k127_686718_9 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000001634 172.0
MMD3_k127_698571_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 377.0
MMD3_k127_698571_1 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000116 103.0
MMD3_k127_698571_3 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000004569 73.0
MMD3_k127_698571_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000001785 68.0
MMD3_k127_698571_5 DsrE/DsrF/DrsH-like family - - - 0.000006434 48.0
MMD3_k127_698666_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1164.0
MMD3_k127_698666_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 428.0
MMD3_k127_698666_2 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 375.0
MMD3_k127_698666_3 Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 356.0
MMD3_k127_698666_4 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 318.0
MMD3_k127_698666_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000006881 219.0
MMD3_k127_698666_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000007785 178.0
MMD3_k127_698666_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000001905 162.0
MMD3_k127_698666_8 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000007656 100.0
MMD3_k127_698666_9 DsrE/DsrF/DrsH-like family - - - 0.000006434 48.0
MMD3_k127_702155_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 605.0
MMD3_k127_702155_1 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 353.0
MMD3_k127_702155_10 O-Antigen ligase K02847 - - 0.00000000000000009358 93.0
MMD3_k127_702155_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009914 304.0
MMD3_k127_702155_3 transferase activity, transferring glycosyl groups K13500 - 2.4.1.175,2.4.1.226 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 302.0
MMD3_k127_702155_4 Domain of unknown function (DUF296) - - - 0.0000000000000000000000000000000000000000000000000000000356 204.0
MMD3_k127_702155_5 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000003092 194.0
MMD3_k127_702155_6 Glycosyl transferase group 1 K00754,K12989 - - 0.0000000000000000000000000000000000000000000000002032 190.0
MMD3_k127_702155_7 glycogen (starch) synthase activity - - - 0.00000000000000000000000000000000000000000002393 176.0
MMD3_k127_702155_8 GlcNAc-PI de-N-acetylase K01463,K20444 - - 0.000000000000000000000000001562 121.0
MMD3_k127_702155_9 Mannosyltransferase (PIG-V) - - - 0.000000000000000000000003621 115.0
MMD3_k127_708786_0 8 heme-binding sites - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 314.0
MMD3_k127_708786_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009134 274.0
MMD3_k127_708786_2 anaerobic electron transport chain - GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0019645,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114 - 0.000000000000000000000000002341 116.0
MMD3_k127_708786_3 protein transport across the cell outer membrane K02452,K02463 - - 0.0000005857 58.0
MMD3_k127_717971_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.102e-229 717.0
MMD3_k127_717971_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 369.0
MMD3_k127_717971_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 360.0
MMD3_k127_717971_3 Domain of unknown function (DUF4337) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005618 232.0
MMD3_k127_717971_4 nuclease K00590,K01174 GO:0003674,GO:0003824,GO:0004518,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575 2.1.1.113,3.1.31.1 0.0000000000000000000000000000000000000008352 154.0
MMD3_k127_71954_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 577.0
MMD3_k127_71954_1 PFAM peptidase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 400.0
MMD3_k127_71954_10 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000009873 216.0
MMD3_k127_71954_11 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000008534 216.0
MMD3_k127_71954_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000006454 209.0
MMD3_k127_71954_13 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000009514 214.0
MMD3_k127_71954_14 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000001286 194.0
MMD3_k127_71954_15 Pas domain - - - 0.0000000000000000000000000000000000000000000000003241 199.0
MMD3_k127_71954_16 Chromosomal replication initiator, DnaA K07491 - - 0.000000000000000000000000000000000000000000000001869 185.0
MMD3_k127_71954_18 Archaeal transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000299 166.0
MMD3_k127_71954_19 nucleotide metabolic process - - - 0.00000000000000000000000000000000001504 143.0
MMD3_k127_71954_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 374.0
MMD3_k127_71954_20 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000009303 125.0
MMD3_k127_71954_21 phosphorelay signal transduction system - - - 0.0000000000000000000000000003215 118.0
MMD3_k127_71954_22 Belongs to the UPF0296 family K09777 - - 0.000000000000000000000000001634 113.0
MMD3_k127_71954_23 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000002946 108.0
MMD3_k127_71954_24 Response regulator, receiver K11443 - - 0.000000000000241 82.0
MMD3_k127_71954_25 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.0000001318 55.0
MMD3_k127_71954_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 359.0
MMD3_k127_71954_4 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 370.0
MMD3_k127_71954_5 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 334.0
MMD3_k127_71954_6 Mur ligase family, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 314.0
MMD3_k127_71954_7 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 304.0
MMD3_k127_71954_8 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000000000000000000001959 234.0
MMD3_k127_71954_9 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000001609 233.0
MMD3_k127_722422_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 437.0
MMD3_k127_722422_1 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 321.0
MMD3_k127_722422_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 295.0
MMD3_k127_722422_3 nickel cation binding K04651,K19640 - - 0.00000000000000000000000000000000002246 138.0
MMD3_k127_722422_4 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000001207 109.0
MMD3_k127_727431_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 557.0
MMD3_k127_727431_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 556.0
MMD3_k127_727431_10 GYD domain - - - 0.00000000000000000000000000000000005692 135.0
MMD3_k127_727431_11 sulfur carrier activity K04085 - - 0.00000000000000000000000005679 108.0
MMD3_k127_727431_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 407.0
MMD3_k127_727431_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 362.0
MMD3_k127_727431_4 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 359.0
MMD3_k127_727431_5 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007762 313.0
MMD3_k127_727431_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 305.0
MMD3_k127_727431_7 Formylmethanofuran dehydrogenase, subunit e K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000001699 226.0
MMD3_k127_727431_8 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000002141 188.0
MMD3_k127_727431_9 Auxin Efflux Carrier K07088 - - 0.0000000000000000000000000000000000000001099 162.0
MMD3_k127_743352_0 AcrB/AcrD/AcrF family - - - 0.0 1202.0
MMD3_k127_743352_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 381.0
MMD3_k127_743352_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000001881 232.0
MMD3_k127_743352_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.00000000000000000000000000000000000000000000006051 178.0
MMD3_k127_7543_0 Surface antigen K07277 - - 7.408e-267 841.0
MMD3_k127_7543_1 Nitrite and sulphite reductase 4Fe-4S K11180 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 589.0
MMD3_k127_7543_10 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000005098 145.0
MMD3_k127_7543_11 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000001973 109.0
MMD3_k127_7543_13 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00003667 52.0
MMD3_k127_7543_14 SdrD B-like domain - - - 0.0007833 48.0
MMD3_k127_7543_2 Nitrite and sulphite reductase 4Fe-4S K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 551.0
MMD3_k127_7543_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 386.0
MMD3_k127_7543_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 353.0
MMD3_k127_7543_5 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006323 279.0
MMD3_k127_7543_6 Psort location Cytoplasmic, score 8.96 K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005907 252.0
MMD3_k127_7543_7 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000005376 207.0
MMD3_k127_7543_8 denitrification pathway - - - 0.000000000000000000000000000000000000000000000004825 183.0
MMD3_k127_7543_9 heme-binding sites - - - 0.000000000000000000000000000000000004058 147.0
MMD3_k127_759824_0 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 359.0
MMD3_k127_759824_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008343 289.0
MMD3_k127_759824_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000009891 209.0
MMD3_k127_759824_3 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000002378 197.0
MMD3_k127_759824_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000002305 177.0
MMD3_k127_759824_5 Cytochrome c - - - 0.00000000000001389 80.0
MMD3_k127_762173_0 cell redox homeostasis - - - 4.064e-213 671.0
MMD3_k127_762173_1 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000000000000003405 203.0
MMD3_k127_762173_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088 - - 0.0000000000000000000000000000000001083 134.0
MMD3_k127_768984_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.036e-199 629.0
MMD3_k127_768984_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.154e-195 616.0
MMD3_k127_768984_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 532.0
MMD3_k127_768984_3 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 313.0
MMD3_k127_768984_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000004682 237.0
MMD3_k127_768984_5 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000025 200.0
MMD3_k127_768984_6 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000001558 127.0
MMD3_k127_768984_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000001188 128.0
MMD3_k127_768984_8 - - - - 0.000000000000000003396 85.0
MMD3_k127_768984_9 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000098 58.0
MMD3_k127_770987_0 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 589.0
MMD3_k127_770987_1 - - - - 0.000000000000002292 79.0
MMD3_k127_770987_2 phosphorelay sensor kinase activity - - - 0.000000001372 65.0
MMD3_k127_770987_3 viral genome integration into host DNA K04763 - - 0.0001018 47.0
MMD3_k127_771038_0 protein secretion K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 527.0
MMD3_k127_771038_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 387.0
MMD3_k127_771038_2 Surface antigen K07277 - - 0.0000001625 62.0
MMD3_k127_77642_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 337.0
MMD3_k127_77642_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 286.0
MMD3_k127_77642_2 metal ion binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002522 252.0
MMD3_k127_77642_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000000000002371 209.0
MMD3_k127_77642_4 Threonyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000000004981 175.0
MMD3_k127_77642_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000006598 173.0
MMD3_k127_776428_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.695e-225 727.0
MMD3_k127_776428_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 359.0
MMD3_k127_78505_0 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 579.0
MMD3_k127_78505_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 434.0
MMD3_k127_787257_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1142.0
MMD3_k127_787257_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 559.0
MMD3_k127_787257_2 oligosaccharyl transferase activity - - - 0.000000000007667 77.0
MMD3_k127_788658_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 2.132e-232 731.0
MMD3_k127_788658_1 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 544.0
MMD3_k127_788658_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 528.0
MMD3_k127_788658_3 Phosphoribosyl transferase domain - - - 0.000005002 50.0
MMD3_k127_788658_4 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.0006033 49.0
MMD3_k127_792958_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.0 1391.0
MMD3_k127_792958_1 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 7.948e-219 689.0
MMD3_k127_792958_10 protein-glutamate methylesterase activity K00575,K03412,K03413,K07719 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000005713 53.0
MMD3_k127_792958_12 - - - - 0.0001677 52.0
MMD3_k127_792958_2 NeuB family K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 436.0
MMD3_k127_792958_3 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 384.0
MMD3_k127_792958_4 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001309 280.0
MMD3_k127_792958_5 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001222 245.0
MMD3_k127_792958_6 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001703 233.0
MMD3_k127_792958_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000007037 212.0
MMD3_k127_792958_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000006207 166.0
MMD3_k127_792958_9 COG0526 Thiol-disulfide isomerase and thioredoxins K03672 - 1.8.1.8 0.0000000000000000000000000000002327 128.0
MMD3_k127_806229_0 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 561.0
MMD3_k127_806229_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 506.0
MMD3_k127_806229_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 462.0
MMD3_k127_806229_3 ATP adenylyltransferase K00988 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 334.0
MMD3_k127_806229_4 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 299.0
MMD3_k127_806229_5 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000001016 98.0
MMD3_k127_806229_6 GDP-mannose mannosyl hydrolase activity - - - 0.000000000000000000009778 94.0
MMD3_k127_806229_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000007836 68.0
MMD3_k127_807887_0 Belongs to the ClpA ClpB family K03694 - - 2.344e-278 876.0
MMD3_k127_807887_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 602.0
MMD3_k127_807887_2 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 471.0
MMD3_k127_807887_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 400.0
MMD3_k127_807887_4 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 381.0
MMD3_k127_807887_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000001225 128.0
MMD3_k127_807887_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000008797 113.0
MMD3_k127_814558_0 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 500.0
MMD3_k127_814558_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 323.0
MMD3_k127_814558_10 Transcriptional regulator - - - 0.000000000000000000000003397 105.0
MMD3_k127_814558_11 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.00000000000000000000008225 102.0
MMD3_k127_814558_12 helix_turn_helix, Lux Regulon - - - 0.000000000000000000002426 106.0
MMD3_k127_814558_13 Gaf domain K01120,K11527 - 2.7.13.3,3.1.4.17 0.000000000007733 77.0
MMD3_k127_814558_14 ROK family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044464,GO:0046835,GO:0051156,GO:0071704,GO:1901135 2.7.1.2 0.00001383 49.0
MMD3_k127_814558_2 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001 272.0
MMD3_k127_814558_3 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000002791 244.0
MMD3_k127_814558_4 Peptidase family M23 K21471 - - 0.0000000000000000000000000000000000000000000000000000000000004038 228.0
MMD3_k127_814558_5 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000001534 196.0
MMD3_k127_814558_6 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000007544 129.0
MMD3_k127_814558_7 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.00000000000000000000000000002696 130.0
MMD3_k127_814558_8 - - - - 0.000000000000000000000000188 110.0
MMD3_k127_814558_9 sensor histidine kinase - - - 0.0000000000000000000000002372 119.0
MMD3_k127_829742_0 - K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 434.0
MMD3_k127_829742_1 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 391.0
MMD3_k127_829742_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 311.0
MMD3_k127_829742_3 Adenylylsulphate kinase K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000018 258.0
MMD3_k127_829742_4 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000004056 196.0
MMD3_k127_829742_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000003018 165.0
MMD3_k127_829742_6 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.00000000000000000000001926 100.0
MMD3_k127_829742_7 response regulator receiver K02481 - - 0.00000000000000004834 87.0
MMD3_k127_829742_8 - - - - 0.000000000000001822 79.0
MMD3_k127_829742_9 alcohol dehydrogenase K00008 - 1.1.1.14 0.000006245 49.0
MMD3_k127_832956_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 384.0
MMD3_k127_832956_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001372 288.0
MMD3_k127_832956_2 Family of unknown function (DUF438) K09155 - - 0.000000000000000000000000000000000000000000000001689 182.0
MMD3_k127_835232_0 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 325.0
MMD3_k127_835232_1 Cobalt transport protein K02008 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003496 276.0
MMD3_k127_835232_2 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000002203 154.0
MMD3_k127_857518_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 512.0
MMD3_k127_857518_1 Mannose-6-phosphate isomerase, type K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 460.0
MMD3_k127_857518_2 UDP-N-acetyl-D-mannosamine dehydrogenase activity K02474,K13015 - 1.1.1.136 0.00000000002669 65.0
MMD3_k127_861867_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1135.0
MMD3_k127_861867_1 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1101.0
MMD3_k127_861867_10 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 293.0
MMD3_k127_861867_11 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000001012 230.0
MMD3_k127_861867_12 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000001261 198.0
MMD3_k127_861867_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000002126 180.0
MMD3_k127_861867_14 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.0000000000000000000000000000000000000006602 155.0
MMD3_k127_861867_15 Domain of unknown function (DUF4416) - - - 0.000000000000000000000000000000000008467 143.0
MMD3_k127_861867_16 Thioredoxin-like - - - 0.00000000000000000000000000000005581 130.0
MMD3_k127_861867_17 PFAM Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000008107 124.0
MMD3_k127_861867_18 - - - - 0.000215 44.0
MMD3_k127_861867_2 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 1.091e-251 788.0
MMD3_k127_861867_3 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 516.0
MMD3_k127_861867_4 molybdopterin oxidoreductase Fe4S4 region K05299 - 1.17.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 494.0
MMD3_k127_861867_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 402.0
MMD3_k127_861867_6 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 402.0
MMD3_k127_861867_7 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 391.0
MMD3_k127_861867_8 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 346.0
MMD3_k127_861867_9 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 305.0
MMD3_k127_875153_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1180.0
MMD3_k127_875153_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 576.0
MMD3_k127_875153_2 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 458.0
MMD3_k127_875153_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000004334 231.0
MMD3_k127_875153_4 IMG reference gene - - - 0.00000000000000001642 85.0
MMD3_k127_904082_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 461.0
MMD3_k127_904082_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 431.0
MMD3_k127_904082_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 359.0
MMD3_k127_904082_3 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002472 278.0
MMD3_k127_904082_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000000000000000000003792 166.0
MMD3_k127_904082_5 CAAX protease self-immunity - - - 0.0000004526 59.0
MMD3_k127_904082_6 peptidase - - - 0.000001373 61.0
MMD3_k127_920885_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 1.21e-308 968.0
MMD3_k127_920885_1 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004761 333.0
MMD3_k127_920885_2 2Fe-2S -binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000005192 215.0
MMD3_k127_920885_3 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000006946 141.0
MMD3_k127_94845_0 Domain of unknown function (DUF1998) K02336,K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 2.7.7.7 1.003e-214 692.0
MMD3_k127_94845_1 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000008579 178.0
MMD3_k127_94845_2 protein-disulfide reductase activity - - - 0.0000000000000000000000000002691 119.0
MMD3_k127_94845_3 - - - - 0.000000001222 59.0
MMD3_k127_956481_0 Aldehyde dehydrogenase family K22187 - - 4.19e-206 651.0
MMD3_k127_956481_1 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 584.0
MMD3_k127_956481_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 574.0
MMD3_k127_956481_3 (2R)-phospho-3-sulfolactate synthase (ComA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 422.0
MMD3_k127_956481_4 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 397.0
MMD3_k127_956481_5 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 394.0
MMD3_k127_956481_6 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000004802 97.0
MMD3_k127_956481_7 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.0005311 42.0
MMD3_k127_95828_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 583.0
MMD3_k127_95828_1 - - - - 0.000000000000000000000000000000000000000000003177 169.0
MMD3_k127_964181_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1390.0
MMD3_k127_964181_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 2.806e-211 667.0
MMD3_k127_964181_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 427.0
MMD3_k127_964181_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 390.0
MMD3_k127_964181_4 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000005128 170.0
MMD3_k127_964181_5 Belongs to the ompA family K03640 - - 0.000000000000000000000003929 108.0
MMD3_k127_964181_6 Transcriptional regulator K03892,K21903 - - 0.000000000002722 73.0
MMD3_k127_969066_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000001186 258.0
MMD3_k127_969066_1 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000006769 237.0
MMD3_k127_969066_2 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000000000101 197.0
MMD3_k127_969066_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.00000000000000000000000003116 111.0
MMD3_k127_969066_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000004418 68.0
MMD3_k127_990005_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000009906 234.0
MMD3_k127_990005_1 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000004847 221.0
MMD3_k127_990005_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000127 119.0
MMD3_k127_990005_3 DNA-binding transcription factor activity K02444,K03655 - 3.6.4.12 0.000002425 55.0