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Overview

ID MAG02659
Name MMS1_bin.42
Sample SMP0064
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Rhodospirillales
Family Magnetospirillaceae
Genus JAJZUL01
Species
Assembly information
Completeness (%) 95.25
Contamination (%) 2.19
GC content (%) 65.0
N50 (bp) 17,562
Genome size (bp) 2,972,352

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2764

Gene name Description KEGG GOs EC E-value Score Sequence
MMS1_k127_1008871_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.026e-302 936.0
MMS1_k127_1008871_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.435e-209 657.0
MMS1_k127_1008871_10 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 327.0
MMS1_k127_1008871_11 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001493 280.0
MMS1_k127_1008871_12 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000003513 248.0
MMS1_k127_1008871_13 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000001825 228.0
MMS1_k127_1008871_14 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000002341 221.0
MMS1_k127_1008871_15 - - - - 0.000000000000000000000000000000000000000000002326 172.0
MMS1_k127_1008871_16 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000001804 161.0
MMS1_k127_1008871_17 Protein of unknown function (FYDLN_acid) - - - 0.000000000000000000001255 101.0
MMS1_k127_1008871_18 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000002215 93.0
MMS1_k127_1008871_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 606.0
MMS1_k127_1008871_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 584.0
MMS1_k127_1008871_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 561.0
MMS1_k127_1008871_5 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 550.0
MMS1_k127_1008871_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 516.0
MMS1_k127_1008871_7 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 465.0
MMS1_k127_1008871_8 Ornithine cyclodeaminase/mu-crystallin family K01750,K19743 - 1.5.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 391.0
MMS1_k127_1008871_9 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 386.0
MMS1_k127_1038279_0 GAF domain K02584 - - 2.331e-209 667.0
MMS1_k127_1038279_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 594.0
MMS1_k127_1038279_2 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 571.0
MMS1_k127_1038279_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003506 256.0
MMS1_k127_1038279_4 ArsC family - - - 0.00000000000000000000000000000000000000001354 162.0
MMS1_k127_1038279_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000009835 140.0
MMS1_k127_1038279_6 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 0.00000000000000000000000000000000002004 136.0
MMS1_k127_1040302_0 Prismane/CO dehydrogenase family K00198 - 1.2.7.4 0.0 1090.0
MMS1_k127_1040302_1 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 602.0
MMS1_k127_1040302_10 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 382.0
MMS1_k127_1040302_11 Belongs to the RuBisCO large chain family K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 339.0
MMS1_k127_1040302_12 Psort location Cytoplasmic, score 9.97 K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 335.0
MMS1_k127_1040302_13 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 321.0
MMS1_k127_1040302_14 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 344.0
MMS1_k127_1040302_15 polysaccharide deacetylase K01452 - 3.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 328.0
MMS1_k127_1040302_16 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 302.0
MMS1_k127_1040302_17 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 288.0
MMS1_k127_1040302_18 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 286.0
MMS1_k127_1040302_19 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 287.0
MMS1_k127_1040302_2 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 578.0
MMS1_k127_1040302_20 Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002221 282.0
MMS1_k127_1040302_21 electron transport K00196,K05796 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044464,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000791 271.0
MMS1_k127_1040302_22 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000009327 271.0
MMS1_k127_1040302_23 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000709 268.0
MMS1_k127_1040302_24 PFAM Major Facilitator Superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001435 262.0
MMS1_k127_1040302_25 pteridine-dependent deoxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001317 256.0
MMS1_k127_1040302_26 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006195 249.0
MMS1_k127_1040302_27 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000467 254.0
MMS1_k127_1040302_28 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000005859 220.0
MMS1_k127_1040302_29 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000001991 222.0
MMS1_k127_1040302_3 Reductase C-terminal K00362,K00529,K18088 - 1.18.1.3,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 559.0
MMS1_k127_1040302_30 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000001664 222.0
MMS1_k127_1040302_31 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000002337 181.0
MMS1_k127_1040302_32 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000006491 180.0
MMS1_k127_1040302_33 Thioredoxin - - - 0.00000000000000000000000000000000000001341 154.0
MMS1_k127_1040302_34 LytTr DNA-binding domain K21696 - - 0.00000000000000000000000000000000000006563 151.0
MMS1_k127_1040302_35 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000001345 149.0
MMS1_k127_1040302_36 dehydratase - - - 0.000000000000000000000000000000000006634 145.0
MMS1_k127_1040302_37 membrane - - - 0.00000000000000000000000000006052 125.0
MMS1_k127_1040302_38 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000001205 119.0
MMS1_k127_1040302_39 Outer membrane lipoprotein carrier protein LolA - - - 0.000000000000000000000001748 113.0
MMS1_k127_1040302_4 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 511.0
MMS1_k127_1040302_40 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000008777 108.0
MMS1_k127_1040302_41 ABC exporter membrane fusion protein, DevB family K02005 - - 0.000000000000000000002787 106.0
MMS1_k127_1040302_42 transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.0000000000000000003293 95.0
MMS1_k127_1040302_43 AMP-binding enzyme - - - 0.00000000000000001125 89.0
MMS1_k127_1040302_44 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000005049 69.0
MMS1_k127_1040302_45 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000005769 48.0
MMS1_k127_1040302_46 Carrier of the growing fatty acid chain in fatty acid biosynthesis K03955 GO:0000035,GO:0000036,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005504,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005759,GO:0005829,GO:0005975,GO:0006082,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009245,GO:0009247,GO:0009249,GO:0009259,GO:0009311,GO:0009312,GO:0009987,GO:0010257,GO:0010467,GO:0015980,GO:0016020,GO:0016043,GO:0016051,GO:0016053,GO:0016226,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031163,GO:0031177,GO:0031406,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032787,GO:0032981,GO:0032991,GO:0033108,GO:0033218,GO:0033293,GO:0034622,GO:0034641,GO:0036094,GO:0036211,GO:0042773,GO:0042775,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044571,GO:0044620,GO:0045271,GO:0045333,GO:0046034,GO:0046394,GO:0046467,GO:0046483,GO:0046493,GO:0046872,GO:0048037,GO:0050136,GO:0051186,GO:0051188,GO:0051192,GO:0051604,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072330,GO:0072341,GO:0072521,GO:0090407,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902494,GO:1903509,GO:1990204 - 0.00009981 49.0
MMS1_k127_1040302_5 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 501.0
MMS1_k127_1040302_6 exporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 512.0
MMS1_k127_1040302_7 Glycosyltransferase like family 2 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 394.0
MMS1_k127_1040302_8 Belongs to the beta-ketoacyl-ACP synthases family K14660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 391.0
MMS1_k127_1040302_9 Cys/Met metabolism PLP-dependent enzyme K00652,K00654 - 2.3.1.47,2.3.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 390.0
MMS1_k127_1076282_0 Von willebrand factor, type a - - - 0.0 1071.0
MMS1_k127_1076282_1 COG0542 ATPases with chaperone activity ATP-binding subunit K11907 - - 0.0 1054.0
MMS1_k127_1076282_10 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 349.0
MMS1_k127_1076282_11 TIGRFAM type VI secretion-associated protein, ImpA family K11902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 306.0
MMS1_k127_1076282_12 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 298.0
MMS1_k127_1076282_13 ImpE protein K11898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 292.0
MMS1_k127_1076282_14 Protein conserved in bacteria K11892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001212 291.0
MMS1_k127_1076282_15 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000003948 275.0
MMS1_k127_1076282_16 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002246 250.0
MMS1_k127_1076282_17 protein conserved in bacteria K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000441 271.0
MMS1_k127_1076282_18 protein conserved in bacteria K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001822 270.0
MMS1_k127_1076282_19 low-complexity proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000001011 267.0
MMS1_k127_1076282_2 type VI secretion protein K11900 - - 3.648e-251 782.0
MMS1_k127_1076282_20 ImcF-related N-terminal domain K11891 - - 0.00000000000000000000000000000000000000000000000000004453 211.0
MMS1_k127_1076282_21 Protein conserved in bacteria K11895 - - 0.00000000000000000000000000000000000000000000000006125 194.0
MMS1_k127_1076282_22 response regulator - - - 0.00000000000000000000000000000000000000000000006819 176.0
MMS1_k127_1076282_23 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000006843 169.0
MMS1_k127_1076282_24 - - - - 0.00000000000000000000000000000000000000001434 153.0
MMS1_k127_1076282_25 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000007661 151.0
MMS1_k127_1076282_26 Ribulose bisphosphate carboxylase large chain, catalytic domain - - - 0.0000000000000000000000000000000000004829 139.0
MMS1_k127_1076282_27 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000935 128.0
MMS1_k127_1076282_28 Gene 25-like lysozyme K11897 - - 0.0000000000000000000000009223 117.0
MMS1_k127_1076282_29 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000007406 100.0
MMS1_k127_1076282_3 Type VI secretion system, TssF K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 551.0
MMS1_k127_1076282_30 Belongs to the peptidase S41A family - - - 0.000000000000000000001733 104.0
MMS1_k127_1076282_32 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000001012 93.0
MMS1_k127_1076282_34 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 K11906 - - 0.00000000000004522 79.0
MMS1_k127_1076282_35 Bacteriophage replication gene A protein (GPA) - - - 0.0000000000006915 71.0
MMS1_k127_1076282_36 - - - - 0.000000000002604 76.0
MMS1_k127_1076282_37 - - - - 0.000000000006953 76.0
MMS1_k127_1076282_38 antisigma factor binding K04749,K04757 - 2.7.11.1 0.0000006982 56.0
MMS1_k127_1076282_39 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000386 51.0
MMS1_k127_1076282_4 type VI secretion protein K11891 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 522.0
MMS1_k127_1076282_5 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 456.0
MMS1_k127_1076282_6 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 451.0
MMS1_k127_1076282_7 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11899,K11900 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 450.0
MMS1_k127_1076282_8 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 409.0
MMS1_k127_1076282_9 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 372.0
MMS1_k127_1076407_0 Circularly permuted ATP-grasp type 2 - - - 0.0 1099.0
MMS1_k127_1076407_1 Transketolase central region - - - 1.537e-316 983.0
MMS1_k127_1076407_2 A circularly permuted ATPgrasp - - - 1.481e-245 773.0
MMS1_k127_1076407_3 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 490.0
MMS1_k127_1076407_4 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 472.0
MMS1_k127_1076407_5 Putative nucleotide-binding of sugar-metabolising enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009815 457.0
MMS1_k127_1076407_6 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 437.0
MMS1_k127_1076407_7 Transcriptional regulator IclR - - - 0.00000000000000000000000000000000000000000000000000000009883 203.0
MMS1_k127_1076407_8 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000002433 179.0
MMS1_k127_109538_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1033.0
MMS1_k127_109538_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 7.522e-261 809.0
MMS1_k127_109538_10 Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP K00868 - 2.7.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000172 291.0
MMS1_k127_109538_11 COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000022 272.0
MMS1_k127_109538_12 LysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005123 261.0
MMS1_k127_109538_13 Chemotaxis phosphatase, CheZ K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001129 253.0
MMS1_k127_109538_14 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000006394 250.0
MMS1_k127_109538_15 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000001033 178.0
MMS1_k127_109538_16 - - - - 0.00000000000000000000000000000000006546 145.0
MMS1_k127_109538_17 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.000000000000000000000000000000001896 143.0
MMS1_k127_109538_18 Succinate dehydrogenase, hydrophobic anchor subunit K00242 - - 0.00000000000000000000000000000009859 135.0
MMS1_k127_109538_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 2.588e-215 676.0
MMS1_k127_109538_20 - - - - 0.000000000000009605 77.0
MMS1_k127_109538_21 - - - - 0.00000000000001422 78.0
MMS1_k127_109538_23 DsrE/DsrF-like family K09004 - - 0.0000000006746 67.0
MMS1_k127_109538_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 591.0
MMS1_k127_109538_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 468.0
MMS1_k127_109538_5 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 462.0
MMS1_k127_109538_6 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 338.0
MMS1_k127_109538_7 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 315.0
MMS1_k127_109538_8 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 296.0
MMS1_k127_109538_9 Aspartate decarboxylase K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 299.0
MMS1_k127_1100355_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.128e-231 727.0
MMS1_k127_1100355_1 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 2.338e-214 676.0
MMS1_k127_1100355_10 ABC transporter, ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 417.0
MMS1_k127_1100355_11 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 405.0
MMS1_k127_1100355_12 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 366.0
MMS1_k127_1100355_13 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 372.0
MMS1_k127_1100355_14 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 345.0
MMS1_k127_1100355_15 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 328.0
MMS1_k127_1100355_16 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 314.0
MMS1_k127_1100355_17 Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003253 281.0
MMS1_k127_1100355_18 Precorrin-2 K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000336 290.0
MMS1_k127_1100355_19 OstA-like protein K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009449 279.0
MMS1_k127_1100355_2 Adenylate cyclase K01768 - 4.6.1.1 3.403e-209 671.0
MMS1_k127_1100355_20 COG1587 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
MMS1_k127_1100355_21 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001128 266.0
MMS1_k127_1100355_22 Precorrin-3B K05934,K13541 - 2.1.1.131,3.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000003632 275.0
MMS1_k127_1100355_23 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000002617 239.0
MMS1_k127_1100355_24 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000000000000000000000000000000000000121 175.0
MMS1_k127_1100355_25 Mitochondrial inner membrane protein - - - 0.0000000000000000000000000000000000000003117 164.0
MMS1_k127_1100355_26 SMART adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000003721 83.0
MMS1_k127_1100355_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 542.0
MMS1_k127_1100355_4 methyl-accepting chemotaxis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 495.0
MMS1_k127_1100355_5 Precorrin-6Y C5,15-methyltransferase K00595 - 2.1.1.132 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 466.0
MMS1_k127_1100355_6 CbiX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 454.0
MMS1_k127_1100355_7 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 450.0
MMS1_k127_1100355_8 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 425.0
MMS1_k127_1100355_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006081 440.0
MMS1_k127_1120196_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1140.0
MMS1_k127_1120196_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1048.0
MMS1_k127_1120196_10 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 366.0
MMS1_k127_1120196_11 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 319.0
MMS1_k127_1120196_12 Domain of unknown function (DUF1849) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 298.0
MMS1_k127_1120196_13 Hopanoid biosynthesis associated radical SAM protein HpnJ - - - 0.000000000000000000000000000000000000000000000000000000000000000001351 248.0
MMS1_k127_1120196_14 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000004192 184.0
MMS1_k127_1120196_15 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000001572 184.0
MMS1_k127_1120196_16 transcriptional regulators K22042 - - 0.0000000000000000000000000000000000000000000000001693 180.0
MMS1_k127_1120196_17 Transcriptional regulator K22041 - - 0.00000000000000000000000000000000000000000000212 171.0
MMS1_k127_1120196_18 Phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000000000000000000000001187 162.0
MMS1_k127_1120196_19 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000000001755 104.0
MMS1_k127_1120196_2 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 3.631e-194 609.0
MMS1_k127_1120196_3 ROK family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 468.0
MMS1_k127_1120196_4 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 433.0
MMS1_k127_1120196_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 427.0
MMS1_k127_1120196_6 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 388.0
MMS1_k127_1120196_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 378.0
MMS1_k127_1120196_8 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 368.0
MMS1_k127_1120196_9 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 370.0
MMS1_k127_1123924_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1054.0
MMS1_k127_1123924_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009922 524.0
MMS1_k127_1146335_0 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 544.0
MMS1_k127_1146335_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 502.0
MMS1_k127_116374_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1255.0
MMS1_k127_116374_1 cofactor biosynthesis protein NifB K02585 - - 3.841e-298 921.0
MMS1_k127_116374_10 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 476.0
MMS1_k127_116374_11 NifU-like N terminal domain K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 456.0
MMS1_k127_116374_12 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 461.0
MMS1_k127_116374_13 Electron transfer flavoprotein domain K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 424.0
MMS1_k127_116374_14 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 454.0
MMS1_k127_116374_15 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 425.0
MMS1_k127_116374_16 PBP superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 378.0
MMS1_k127_116374_17 SIR2-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006347 365.0
MMS1_k127_116374_18 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 349.0
MMS1_k127_116374_19 Electron transfer flavoprotein alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 355.0
MMS1_k127_116374_2 FAD dependent oxidoreductase K00313 - - 2.974e-223 709.0
MMS1_k127_116374_20 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 346.0
MMS1_k127_116374_21 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 341.0
MMS1_k127_116374_22 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 340.0
MMS1_k127_116374_23 LRV protein FeS4 cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 313.0
MMS1_k127_116374_24 LRV protein FeS4 cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001759 281.0
MMS1_k127_116374_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000559 272.0
MMS1_k127_116374_26 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000005731 248.0
MMS1_k127_116374_27 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000236 244.0
MMS1_k127_116374_28 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007087 237.0
MMS1_k127_116374_29 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000005723 214.0
MMS1_k127_116374_3 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 2.145e-209 655.0
MMS1_k127_116374_30 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000006492 218.0
MMS1_k127_116374_31 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000004246 214.0
MMS1_k127_116374_32 Fic/DOC family K07341 - - 0.000000000000000000000000000000000000000000000000000009327 191.0
MMS1_k127_116374_33 Ferredoxin, 2Fe-2S - - - 0.000000000000000000000000000000000000000000000000003496 183.0
MMS1_k127_116374_34 Could be a 3Fe-4S cluster-containing protein K03855 - - 0.00000000000000000000000000000000000000000000000014 179.0
MMS1_k127_116374_35 Phosphatidylinositol diacylglycerol-lyase K01771 - 4.6.1.13 0.000000000000000000000000000000000000000000000009484 188.0
MMS1_k127_116374_36 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000002459 178.0
MMS1_k127_116374_37 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000008997 170.0
MMS1_k127_116374_38 NifZ domain K02597 - - 0.000000000000000000000000000000000000000006394 166.0
MMS1_k127_116374_39 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000008391 153.0
MMS1_k127_116374_4 May be involved in recombinational repair of damaged DNA K03631 - - 4.309e-200 637.0
MMS1_k127_116374_40 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000004468 162.0
MMS1_k127_116374_41 - - - - 0.000000000000000000000000000000000000001334 154.0
MMS1_k127_116374_42 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.000000000000000000000000000000000000002372 149.0
MMS1_k127_116374_43 Iron-sulphur cluster biosynthesis - - - 0.00000000000000000000000000000000000004608 147.0
MMS1_k127_116374_44 4Fe-4S binding domain - - - 0.000000000000000000000000000000000003466 142.0
MMS1_k127_116374_45 Domain of unknown function (DUF1956) - - - 0.00000000000000000000000000000000000394 146.0
MMS1_k127_116374_46 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000001802 138.0
MMS1_k127_116374_47 SnoaL-like domain - - - 0.00000000000000000000000000000000001852 142.0
MMS1_k127_116374_48 4Fe-4S binding domain - - - 0.000000000000000000000000000000001123 130.0
MMS1_k127_116374_49 PFAM SpoVT AbrB domain protein - - - 0.000000000000000000000000000000003167 130.0
MMS1_k127_116374_5 Sugar (and other) transporter K03446 - - 1.01e-198 632.0
MMS1_k127_116374_50 NifT/FixU protein K02593 - - 0.000000000000000000000000000138 116.0
MMS1_k127_116374_51 - - - - 0.0000000000000000000000000002043 121.0
MMS1_k127_116374_52 NifZ domain K02597 - - 0.0000000000000000000000000003569 115.0
MMS1_k127_116374_53 S4 RNA-binding domain K04762 - - 0.0000000000000000000000000003727 118.0
MMS1_k127_116374_54 Protein of unknown function (DUF1150) - - - 0.000000000000000000001312 96.0
MMS1_k127_116374_55 - - - - 0.0000000000000000002763 91.0
MMS1_k127_116374_56 - - - - 0.0000000000000000005458 93.0
MMS1_k127_116374_57 - - - - 0.00000001864 63.0
MMS1_k127_116374_6 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 588.0
MMS1_k127_116374_7 Electron transfer flavoprotein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 573.0
MMS1_k127_116374_8 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 565.0
MMS1_k127_116374_9 Voltage-dependent anion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 503.0
MMS1_k127_117045_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 543.0
MMS1_k127_117045_1 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 478.0
MMS1_k127_117045_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 430.0
MMS1_k127_117045_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 340.0
MMS1_k127_1171815_0 5-aminolevulinic acid synthase K00643 - 2.3.1.37 1.518e-226 706.0
MMS1_k127_1171815_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.492e-217 681.0
MMS1_k127_1171815_10 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000000000000005743 144.0
MMS1_k127_1171815_11 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000002536 121.0
MMS1_k127_1171815_12 - - - - 0.000000000000003141 78.0
MMS1_k127_1171815_13 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000001169 82.0
MMS1_k127_1171815_14 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000003707 78.0
MMS1_k127_1171815_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 1.361e-201 636.0
MMS1_k127_1171815_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 468.0
MMS1_k127_1171815_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 384.0
MMS1_k127_1171815_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009246 373.0
MMS1_k127_1171815_6 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 305.0
MMS1_k127_1171815_7 Peptidase family S49 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006727 297.0
MMS1_k127_1171815_8 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000769 224.0
MMS1_k127_1171815_9 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000000003257 202.0
MMS1_k127_1181235_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 304.0
MMS1_k127_1181235_1 PFAM Lanthionine synthetase C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003875 262.0
MMS1_k127_1181235_2 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000009887 169.0
MMS1_k127_1181235_3 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000000000000000000006535 173.0
MMS1_k127_1181235_4 Pkd domain containing protein - - - 0.000000000000000000000000000000000000003436 159.0
MMS1_k127_1181235_5 Bacterial PH domain - - - 0.0000000000000000000000004738 110.0
MMS1_k127_1181235_6 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000007002 74.0
MMS1_k127_1181235_7 Nitrile hydratase - - - 0.000000001237 66.0
MMS1_k127_1181235_8 Nitrile hydratase - - - 0.00000005498 61.0
MMS1_k127_1181235_9 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0003284 46.0
MMS1_k127_118586_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1647.0
MMS1_k127_118586_1 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0 1120.0
MMS1_k127_118586_10 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 481.0
MMS1_k127_118586_11 lysyl-tRNA synthetase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 477.0
MMS1_k127_118586_12 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 444.0
MMS1_k127_118586_13 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 409.0
MMS1_k127_118586_14 Surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 402.0
MMS1_k127_118586_15 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 373.0
MMS1_k127_118586_16 flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 357.0
MMS1_k127_118586_17 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 347.0
MMS1_k127_118586_18 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 334.0
MMS1_k127_118586_19 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 333.0
MMS1_k127_118586_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 3.515e-233 726.0
MMS1_k127_118586_20 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 338.0
MMS1_k127_118586_21 COG0518 GMP synthase - Glutamine amidotransferase domain K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002046 258.0
MMS1_k127_118586_22 Phage-associated protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003501 244.0
MMS1_k127_118586_23 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007071 246.0
MMS1_k127_118586_24 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000001913 269.0
MMS1_k127_118586_25 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000001988 217.0
MMS1_k127_118586_26 transcriptional regulator K13771 - - 0.0000000000000000000000000000000000000000000000000000003359 196.0
MMS1_k127_118586_27 Domain of unknown function (DUF4170) - - - 0.00000000000000000000000000000000000000000000000000002573 191.0
MMS1_k127_118586_28 COG0760 Parvulin-like peptidyl-prolyl isomerase K03769,K03771 - 5.2.1.8 0.00000000000000000000000000000000000000005865 154.0
MMS1_k127_118586_29 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000007148 128.0
MMS1_k127_118586_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 2.528e-207 650.0
MMS1_k127_118586_30 COG2885 outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.0000000000000000000000003702 118.0
MMS1_k127_118586_31 - - - - 0.00000000000008982 75.0
MMS1_k127_118586_4 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 5.221e-202 640.0
MMS1_k127_118586_5 Diguanylate cyclase K13924 - 2.1.1.80,3.1.1.61 4.271e-198 633.0
MMS1_k127_118586_6 COG2200 FOG EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 576.0
MMS1_k127_118586_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 512.0
MMS1_k127_118586_8 MotA TolQ ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 490.0
MMS1_k127_118586_9 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 487.0
MMS1_k127_1191937_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 424.0
MMS1_k127_1191937_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 401.0
MMS1_k127_1191937_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 385.0
MMS1_k127_1191937_3 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 376.0
MMS1_k127_1191937_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 359.0
MMS1_k127_1191937_5 - - - - 0.000000000000000000005083 98.0
MMS1_k127_1191937_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.000002332 52.0
MMS1_k127_1197636_0 COG2200 FOG EAL domain - - - 1.359e-274 857.0
MMS1_k127_1197636_1 peptidase U62, modulator of DNA gyrase K03568 - - 8.854e-245 763.0
MMS1_k127_1197636_10 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0001233 46.0
MMS1_k127_1197636_2 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 486.0
MMS1_k127_1197636_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 476.0
MMS1_k127_1197636_4 Arsenical pump membrane protein K03893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 422.0
MMS1_k127_1197636_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 300.0
MMS1_k127_1197636_6 Putative bacterial sensory transduction regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 292.0
MMS1_k127_1197636_7 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000006159 151.0
MMS1_k127_1197636_8 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000001003 116.0
MMS1_k127_1197636_9 Membrane fusogenic activity K09806 - - 0.0000000000001855 72.0
MMS1_k127_1207119_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1367.0
MMS1_k127_1207119_1 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 2.774e-266 829.0
MMS1_k127_1207119_2 oxidoreductase, FAD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 414.0
MMS1_k127_1207119_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 308.0
MMS1_k127_1207119_4 Domain of unknown function (DUF4167) - - - 0.0000000000000000000000000000000000000006794 154.0
MMS1_k127_1207119_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000003805 119.0
MMS1_k127_1224679_0 Class II Aldolase and Adducin N-terminal domain - - - 2.398e-255 796.0
MMS1_k127_1224679_1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 397.0
MMS1_k127_1230895_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 556.0
MMS1_k127_1230895_1 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000886 213.0
MMS1_k127_1230895_2 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.0000000000000000000000000000000000000003387 156.0
MMS1_k127_1230895_3 - - - - 0.00000000000000000000000000000000000002637 150.0
MMS1_k127_1230895_4 lytic transglycosylase activity - - - 0.0000000000000000000000000000000001285 138.0
MMS1_k127_1241192_0 amino acid - - - 7.228e-211 668.0
MMS1_k127_1241192_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 379.0
MMS1_k127_1241192_10 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000285 160.0
MMS1_k127_1241192_11 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000000000006706 154.0
MMS1_k127_1241192_12 Fe-S type, tartrate fumarate subfamily, alpha subunit K03779 - 4.2.1.32 0.0000000000000000000000000000000000000001848 151.0
MMS1_k127_1241192_13 - - - - 0.0000000000000000000000000000000004216 138.0
MMS1_k127_1241192_14 succinate dehydrogenase K00246 - - 0.0000000000000000000000000000000004833 136.0
MMS1_k127_1241192_15 Cytochrome c K19713 - 1.8.2.2 0.000000000000000000000002873 109.0
MMS1_k127_1241192_2 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 358.0
MMS1_k127_1241192_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 302.0
MMS1_k127_1241192_4 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007377 295.0
MMS1_k127_1241192_5 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001658 274.0
MMS1_k127_1241192_6 PFAM Methyltransferase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002231 244.0
MMS1_k127_1241192_7 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000214 229.0
MMS1_k127_1241192_8 Inner membrane component domain - - - 0.0000000000000000000000000000000000000000000000000000002565 196.0
MMS1_k127_1241192_9 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00247 - - 0.00000000000000000000000000000000000000001767 164.0
MMS1_k127_124553_0 Putative beta-barrel porin 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 347.0
MMS1_k127_124553_1 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000951 280.0
MMS1_k127_124553_2 Chain length determinant protein K16554 - - 0.00000000000000000000000000000000000000000000000000000000000003354 223.0
MMS1_k127_124553_4 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.00000000000000000000000000000000000000000000000000000000001699 214.0
MMS1_k127_124553_5 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000007965 207.0
MMS1_k127_124553_6 Uncharacterised nucleotidyltransferase - - - 0.0000000000000000000000000000000000000001825 164.0
MMS1_k127_124553_7 PAP2 superfamily - - - 0.0000001706 62.0
MMS1_k127_1250034_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 359.0
MMS1_k127_1250034_1 GPR1/FUN34/yaaH family K07034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007265 246.0
MMS1_k127_1250034_2 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000009635 169.0
MMS1_k127_1250034_3 COG0517 FOG CBS domain - - - 0.00000000000000000000000000000000000000003559 157.0
MMS1_k127_1250034_4 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000003144 102.0
MMS1_k127_1250034_5 Phosphate-starvation-inducible E - - - 0.0000000000003516 76.0
MMS1_k127_1303298_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.0 1258.0
MMS1_k127_1303298_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1077.0
MMS1_k127_1303298_10 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 550.0
MMS1_k127_1303298_11 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050,K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 458.0
MMS1_k127_1303298_12 GDP-mannose 4,6 dehydratase K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 441.0
MMS1_k127_1303298_13 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 440.0
MMS1_k127_1303298_14 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008504 444.0
MMS1_k127_1303298_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 430.0
MMS1_k127_1303298_16 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 420.0
MMS1_k127_1303298_17 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 410.0
MMS1_k127_1303298_18 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 403.0
MMS1_k127_1303298_19 ATPases associated with a variety of cellular activities K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 344.0
MMS1_k127_1303298_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1069.0
MMS1_k127_1303298_20 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005205 339.0
MMS1_k127_1303298_21 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 317.0
MMS1_k127_1303298_22 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 316.0
MMS1_k127_1303298_23 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 299.0
MMS1_k127_1303298_24 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 295.0
MMS1_k127_1303298_25 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006153 295.0
MMS1_k127_1303298_26 Binding-protein-dependent transport system inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001247 285.0
MMS1_k127_1303298_27 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000238 272.0
MMS1_k127_1303298_28 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002047 270.0
MMS1_k127_1303298_29 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007754 265.0
MMS1_k127_1303298_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 3.169e-274 861.0
MMS1_k127_1303298_30 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000001659 260.0
MMS1_k127_1303298_31 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001648 254.0
MMS1_k127_1303298_32 ANTAR K07183 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001821 250.0
MMS1_k127_1303298_33 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000004288 257.0
MMS1_k127_1303298_34 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001666 244.0
MMS1_k127_1303298_35 Bacteriocin-protection, YdeI or OmpD-Associated K06878 - - 0.000000000000000000000000000000000000000000000000000000000000009896 220.0
MMS1_k127_1303298_36 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000000001456 226.0
MMS1_k127_1303298_37 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.000000000000000000000000000000000000000000000000000004373 202.0
MMS1_k127_1303298_38 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000013 188.0
MMS1_k127_1303298_39 transport - - - 0.0000000000000000000000000000000000000000000000003818 186.0
MMS1_k127_1303298_4 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 2.429e-239 751.0
MMS1_k127_1303298_40 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000000000000000000000000000000001565 177.0
MMS1_k127_1303298_41 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000074 184.0
MMS1_k127_1303298_42 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000000000000001438 144.0
MMS1_k127_1303298_43 Belongs to the UPF0335 family - - - 0.00000000000000000000000000531 113.0
MMS1_k127_1303298_44 - - - - 0.0000000000000000000000000534 110.0
MMS1_k127_1303298_45 Macrophage migration inhibitory factor (MIF) - - - 0.0000000000000000000000002482 108.0
MMS1_k127_1303298_47 DsrE/DsrF-like family K09004 - - 0.0000000000000000000006917 102.0
MMS1_k127_1303298_48 Diacylglycerol kinase K00901 - 2.7.1.107 0.00000000000000000005822 94.0
MMS1_k127_1303298_49 LTXXQ motif family protein - - - 0.0000000000000001477 87.0
MMS1_k127_1303298_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 1.593e-224 705.0
MMS1_k127_1303298_50 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000001509 80.0
MMS1_k127_1303298_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 9.496e-224 700.0
MMS1_k127_1303298_7 Putative diguanylate phosphodiesterase - - - 6.169e-211 694.0
MMS1_k127_1303298_8 Filamentation induced by cAMP protein fic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 566.0
MMS1_k127_1303298_9 3-beta hydroxysteroid dehydrogenase/isomerase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 555.0
MMS1_k127_1306256_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 8.129e-246 767.0
MMS1_k127_1306256_1 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 537.0
MMS1_k127_1306256_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 423.0
MMS1_k127_1306256_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000000000000000000000001611 248.0
MMS1_k127_1306256_4 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000171 160.0
MMS1_k127_1306802_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 529.0
MMS1_k127_1306802_1 Formyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 312.0
MMS1_k127_1306802_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000123 286.0
MMS1_k127_1306802_3 abc-type branched-chain amino acid transport K01999 - - 0.0000000000000001791 84.0
MMS1_k127_1329588_0 Belongs to the globin family K05916 - 1.14.12.17 2.562e-229 714.0
MMS1_k127_1329588_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 430.0
MMS1_k127_1329588_2 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000000000000001855 203.0
MMS1_k127_1329588_3 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.0000000000000000000000000000000000001509 141.0
MMS1_k127_1352782_0 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 473.0
MMS1_k127_1352782_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009842 349.0
MMS1_k127_1352782_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000006643 118.0
MMS1_k127_1353504_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1110.0
MMS1_k127_1353504_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 582.0
MMS1_k127_1353504_10 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004911 297.0
MMS1_k127_1353504_11 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000008875 244.0
MMS1_k127_1353504_12 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000002153 237.0
MMS1_k127_1353504_13 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001738 233.0
MMS1_k127_1353504_14 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000001253 221.0
MMS1_k127_1353504_15 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000000226 212.0
MMS1_k127_1353504_16 transcriptional regulator - - - 0.000000000000000000000000000000000000000008388 162.0
MMS1_k127_1353504_17 Phasin protein - - - 0.00000000000000000000000000000000000000121 152.0
MMS1_k127_1353504_18 - - - - 0.00000000000000000000000001267 115.0
MMS1_k127_1353504_19 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000000179 106.0
MMS1_k127_1353504_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 561.0
MMS1_k127_1353504_20 - - - - 0.000000000000000000000296 100.0
MMS1_k127_1353504_3 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 470.0
MMS1_k127_1353504_4 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 452.0
MMS1_k127_1353504_5 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 434.0
MMS1_k127_1353504_6 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 407.0
MMS1_k127_1353504_7 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 - 2.4.2.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 384.0
MMS1_k127_1353504_8 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 372.0
MMS1_k127_1353504_9 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 325.0
MMS1_k127_1369368_0 Cyclic nucleotide-monophosphate binding domain - - - 0.0 1100.0
MMS1_k127_1369368_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 1.145e-234 730.0
MMS1_k127_1369368_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.841e-217 682.0
MMS1_k127_1369368_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 7.585e-207 655.0
MMS1_k127_1369368_4 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 385.0
MMS1_k127_1369368_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 328.0
MMS1_k127_1369368_6 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 316.0
MMS1_k127_1369368_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000001809 109.0
MMS1_k127_1370274_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.323e-281 872.0
MMS1_k127_1370274_1 Polysaccharide biosynthesis protein K13013 - - 4.621e-271 855.0
MMS1_k127_1370274_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 593.0
MMS1_k127_1370274_3 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 363.0
MMS1_k127_1370274_4 trans-aconitate K00598 - 2.1.1.144 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 338.0
MMS1_k127_1370274_5 reductase K05895 - 1.3.1.106,1.3.1.54 0.000000000000000000000000000000000000000000000000000000000000000000001679 243.0
MMS1_k127_1370274_6 methyltransferase K04786 - - 0.000000000000000000000000000000000000000006134 158.0
MMS1_k127_1370274_7 - - - - 0.00002156 51.0
MMS1_k127_1373015_0 HELICc2 K03722 - 3.6.4.12 0.0 1259.0
MMS1_k127_1373015_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 2.511e-305 943.0
MMS1_k127_1373015_2 Belongs to the 5'-nucleotidase family K01081,K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005378 444.0
MMS1_k127_1373454_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1086.0
MMS1_k127_1373454_1 4Fe-4S dicluster domain - - - 2.91e-270 837.0
MMS1_k127_1373454_10 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 432.0
MMS1_k127_1373454_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 409.0
MMS1_k127_1373454_12 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 394.0
MMS1_k127_1373454_13 COG2199 FOG GGDEF domain K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 367.0
MMS1_k127_1373454_14 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 328.0
MMS1_k127_1373454_15 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008834 325.0
MMS1_k127_1373454_16 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 326.0
MMS1_k127_1373454_17 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001185 266.0
MMS1_k127_1373454_18 Peptidase S24-like K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000219 244.0
MMS1_k127_1373454_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000244 250.0
MMS1_k127_1373454_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 1.14e-204 648.0
MMS1_k127_1373454_20 DsrE/DsrF-like family K07235 - - 0.0000000000000000000000000000000000000000000000000000000000000007101 220.0
MMS1_k127_1373454_21 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000000000000000172 215.0
MMS1_k127_1373454_22 DsrE/DsrF-like family K07236 - - 0.00000000000000000000000000000000000000000000000000000000000003201 215.0
MMS1_k127_1373454_23 - - - - 0.0000000000000000000000000000000000000000000002372 171.0
MMS1_k127_1373454_24 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000000000000000000002715 160.0
MMS1_k127_1373454_25 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000001962 155.0
MMS1_k127_1373454_26 DsrH like protein K07237 - - 0.0000000000000000000000000000000000008594 141.0
MMS1_k127_1373454_27 - - - - 0.000000000000000000000003773 115.0
MMS1_k127_1373454_28 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.0000000000000000000002826 103.0
MMS1_k127_1373454_29 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000002983 93.0
MMS1_k127_1373454_3 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 581.0
MMS1_k127_1373454_4 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 526.0
MMS1_k127_1373454_5 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 518.0
MMS1_k127_1373454_6 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 510.0
MMS1_k127_1373454_7 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000884 487.0
MMS1_k127_1373454_8 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 481.0
MMS1_k127_1373454_9 Glycosyl transferase family, a/b domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005484 449.0
MMS1_k127_1373549_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 303.0
MMS1_k127_1373549_1 Gram-negative porin K08720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 296.0
MMS1_k127_1373549_2 Predicted methyltransferase regulatory domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001382 266.0
MMS1_k127_1373549_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000002442 228.0
MMS1_k127_1373549_4 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000006576 206.0
MMS1_k127_1373549_5 Domain of unknown function (DUF3576) - - - 0.00000000000000000000000000000000000000000000000000001815 197.0
MMS1_k127_1374087_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.718e-200 629.0
MMS1_k127_1374087_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 517.0
MMS1_k127_1374087_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 479.0
MMS1_k127_1374087_3 AFG1-like ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000002994 216.0
MMS1_k127_1390410_0 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 601.0
MMS1_k127_1390410_1 Cysteine synthase K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 574.0
MMS1_k127_1390410_10 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.000000000000000000000000000001257 130.0
MMS1_k127_1390410_11 transcriptional - - - 0.00000000000000000000000009353 111.0
MMS1_k127_1390410_2 Sulfate transporter K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 570.0
MMS1_k127_1390410_3 COG2200 FOG EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 454.0
MMS1_k127_1390410_4 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 413.0
MMS1_k127_1390410_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000001593 255.0
MMS1_k127_1390410_6 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000000000000000005086 198.0
MMS1_k127_1390410_7 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.00000000000000000000000000000000000000000000002239 180.0
MMS1_k127_1390410_8 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000000002278 174.0
MMS1_k127_1390410_9 integral membrane protein - - - 0.00000000000000000000000000000000000000000002257 166.0
MMS1_k127_1394174_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1690.0
MMS1_k127_1394174_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002159 258.0
MMS1_k127_1394174_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000003458 189.0
MMS1_k127_1398315_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1161.0
MMS1_k127_1398315_1 Molecular chaperone. Has ATPase activity K04079 - - 9.375e-290 903.0
MMS1_k127_1398315_10 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 326.0
MMS1_k127_1398315_11 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007515 311.0
MMS1_k127_1398315_12 Belongs to the BI1 family K06890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 311.0
MMS1_k127_1398315_13 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 306.0
MMS1_k127_1398315_14 DnaJ-class molecular chaperone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 309.0
MMS1_k127_1398315_15 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001831 304.0
MMS1_k127_1398315_16 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000002149 261.0
MMS1_k127_1398315_17 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005916 254.0
MMS1_k127_1398315_18 Belongs to the UPF0260 family K09160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002626 243.0
MMS1_k127_1398315_19 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001119 231.0
MMS1_k127_1398315_2 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 594.0
MMS1_k127_1398315_20 - - - - 0.000000000000000000000000000000000000000000000000008372 185.0
MMS1_k127_1398315_21 COG1544 Ribosome-associated protein Y (PSrp-1) - - - 0.00000000000000000000000000000000000000000000000003121 186.0
MMS1_k127_1398315_22 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000002556 159.0
MMS1_k127_1398315_23 Histidine phosphotransferase C-terminal domain K13588 - - 0.00000000000000000000000000000626 126.0
MMS1_k127_1398315_3 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 574.0
MMS1_k127_1398315_4 de-polymerase K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 548.0
MMS1_k127_1398315_5 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 542.0
MMS1_k127_1398315_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 498.0
MMS1_k127_1398315_7 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 370.0
MMS1_k127_1398315_8 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 345.0
MMS1_k127_1398315_9 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 354.0
MMS1_k127_1404973_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 447.0
MMS1_k127_1404973_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 443.0
MMS1_k127_1404973_10 Hemolysin-type calcium-binding repeat 2 copies family protein - - - 0.0000000000002924 85.0
MMS1_k127_1404973_2 PFAM GGDEF domain containing protein K18968 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 294.0
MMS1_k127_1404973_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001992 279.0
MMS1_k127_1404973_4 transposase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007292 284.0
MMS1_k127_1404973_5 Trypsin-like serine protease K04775 - - 0.00000000000000000000000000000000000000000000000000000000000002359 224.0
MMS1_k127_1404973_6 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000001095 204.0
MMS1_k127_1404973_7 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000009785 196.0
MMS1_k127_1404973_8 Cadherin repeats. - - - 0.0000000000000000000000000000007581 143.0
MMS1_k127_1404973_9 AsmA family K07289 - - 0.0000000000000000000000001109 114.0
MMS1_k127_1430981_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 1.352e-199 629.0
MMS1_k127_1430981_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 509.0
MMS1_k127_1430981_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 490.0
MMS1_k127_1430981_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000009927 125.0
MMS1_k127_1444562_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.597e-244 762.0
MMS1_k127_1444562_1 Stringent starvation protein B K09985 - - 0.00000000000000000000000000000000000000000000000000000004462 201.0
MMS1_k127_150679_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 615.0
MMS1_k127_150679_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009854 533.0
MMS1_k127_150679_10 Pyridoxamine 5-phosphate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004331 254.0
MMS1_k127_150679_11 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.00000000000000000000000000000000000000000000000000000000000009276 221.0
MMS1_k127_150679_12 COG2030 Acyl dehydratase K17865 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.00000000000000000000000000000000000000000000000000000000000101 219.0
MMS1_k127_150679_13 - - - - 0.00000000000000000000000000000007469 138.0
MMS1_k127_150679_14 DsrC like protein K11179 - - 0.00000000000000000000000001748 113.0
MMS1_k127_150679_16 - - - - 0.0000000000000000504 85.0
MMS1_k127_150679_2 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 516.0
MMS1_k127_150679_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 448.0
MMS1_k127_150679_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 425.0
MMS1_k127_150679_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 365.0
MMS1_k127_150679_6 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 361.0
MMS1_k127_150679_7 DJ-1/PfpI family K18199 - 4.2.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 325.0
MMS1_k127_150679_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 306.0
MMS1_k127_150679_9 Protein of unknown function (DUF1348) K09958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004414 278.0
MMS1_k127_1507679_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 597.0
MMS1_k127_1507679_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 569.0
MMS1_k127_1507679_10 Amino acid permease K20265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000107 280.0
MMS1_k127_1507679_11 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000002255 179.0
MMS1_k127_1507679_12 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000002653 130.0
MMS1_k127_1507679_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 558.0
MMS1_k127_1507679_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 424.0
MMS1_k127_1507679_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 406.0
MMS1_k127_1507679_5 COG0859 ADP-heptose LPS heptosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 389.0
MMS1_k127_1507679_6 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 332.0
MMS1_k127_1507679_7 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 328.0
MMS1_k127_1507679_8 PFAM cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 306.0
MMS1_k127_1507679_9 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005553 283.0
MMS1_k127_1510008_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1123.0
MMS1_k127_1510008_1 nuclear chromosome segregation - - - 0.0 1037.0
MMS1_k127_1510008_10 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 392.0
MMS1_k127_1510008_11 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 383.0
MMS1_k127_1510008_12 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 369.0
MMS1_k127_1510008_13 extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 358.0
MMS1_k127_1510008_14 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 310.0
MMS1_k127_1510008_15 Molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 309.0
MMS1_k127_1510008_16 Ferritin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 311.0
MMS1_k127_1510008_17 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001321 237.0
MMS1_k127_1510008_18 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000001013 218.0
MMS1_k127_1510008_19 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000001096 214.0
MMS1_k127_1510008_2 Belongs to the DEAD box helicase family - - - 5.229e-232 728.0
MMS1_k127_1510008_20 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000003125 213.0
MMS1_k127_1510008_21 COG1607 Acyl-CoA hydrolase K10806 - - 0.0000000000000000000000000000000000000000000000000000009161 195.0
MMS1_k127_1510008_22 - - - - 0.00000000000000000000000000000002356 135.0
MMS1_k127_1510008_23 PQ loop repeat K15383 - - 0.00000000000000000000003576 102.0
MMS1_k127_1510008_25 Protein tyrosine kinase - - - 0.000000001881 68.0
MMS1_k127_1510008_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 601.0
MMS1_k127_1510008_4 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 542.0
MMS1_k127_1510008_5 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 467.0
MMS1_k127_1510008_6 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 445.0
MMS1_k127_1510008_7 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 445.0
MMS1_k127_1510008_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 401.0
MMS1_k127_1510008_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 403.0
MMS1_k127_151770_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 582.0
MMS1_k127_151770_1 abc-type branched-chain amino acid transport K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 527.0
MMS1_k127_151770_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 389.0
MMS1_k127_151770_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 340.0
MMS1_k127_151770_4 COG3637 Opacity protein and related surface antigens - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 317.0
MMS1_k127_151770_5 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 300.0
MMS1_k127_151770_6 COG3658 Cytochrome b - - - 0.000000000000000000000000000000000000000000000000000000000002234 219.0
MMS1_k127_151770_7 Cytochrome C' - - - 0.0000000000000000000000000000015 126.0
MMS1_k127_151770_8 - - - - 0.0000000000000000000000000001041 123.0
MMS1_k127_151770_9 - - - - 0.000000000000002713 82.0
MMS1_k127_152923_0 Alcohol dehydrogenase GroES-like domain K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 605.0
MMS1_k127_152923_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 582.0
MMS1_k127_152923_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 501.0
MMS1_k127_152923_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 489.0
MMS1_k127_152923_4 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 415.0
MMS1_k127_152923_5 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 290.0
MMS1_k127_152923_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000003356 198.0
MMS1_k127_152923_7 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000009892 164.0
MMS1_k127_152923_9 Resolvase - - - 0.0003507 45.0
MMS1_k127_156026_0 COG1020 Non-ribosomal peptide synthetase modules and related proteins K02364 - 6.3.2.14 0.0 1636.0
MMS1_k127_156026_1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 0.0 1148.0
MMS1_k127_156026_10 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 333.0
MMS1_k127_156026_11 Peptidase S24-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 313.0
MMS1_k127_156026_12 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000000000001049 209.0
MMS1_k127_156026_13 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000003646 218.0
MMS1_k127_156026_14 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000004913 206.0
MMS1_k127_156026_15 Cold shock K03704 - - 0.00000000000000000000000000001094 119.0
MMS1_k127_156026_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.019e-213 672.0
MMS1_k127_156026_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 605.0
MMS1_k127_156026_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 574.0
MMS1_k127_156026_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 522.0
MMS1_k127_156026_6 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 522.0
MMS1_k127_156026_7 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 489.0
MMS1_k127_156026_8 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 380.0
MMS1_k127_156026_9 GTP cyclohydrolase K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 349.0
MMS1_k127_1561154_0 Aminotransferase class-III K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 611.0
MMS1_k127_1561154_1 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 496.0
MMS1_k127_1561154_10 - - - - 0.00000000000000000008021 96.0
MMS1_k127_1561154_11 - - - - 0.0005876 47.0
MMS1_k127_1561154_2 Domain of unknown function (DUF3362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 448.0
MMS1_k127_1561154_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 436.0
MMS1_k127_1561154_4 Diguanylate cyclase phosphodiesterase with PAS PAC K21023 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007152 409.0
MMS1_k127_1561154_5 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 385.0
MMS1_k127_1561154_6 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 331.0
MMS1_k127_1561154_7 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000001773 244.0
MMS1_k127_1561154_8 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000007535 193.0
MMS1_k127_1561154_9 COG2202 FOG PAS PAC domain K03406,K03776 - - 0.00000000000000000000000000000000003141 139.0
MMS1_k127_1575363_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 502.0
MMS1_k127_1575363_1 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 424.0
MMS1_k127_1575363_2 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 417.0
MMS1_k127_1575363_3 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 404.0
MMS1_k127_1575363_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 326.0
MMS1_k127_1575363_5 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000001921 214.0
MMS1_k127_1575363_6 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000002133 162.0
MMS1_k127_1575363_8 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000418 85.0
MMS1_k127_1601179_0 Proton-conducting membrane transporter K00342,K05561,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 521.0
MMS1_k127_1601179_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 405.0
MMS1_k127_1601179_10 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000276 71.0
MMS1_k127_1601179_11 antiporter activity K05570 - - 0.00000000003517 74.0
MMS1_k127_1601179_2 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 377.0
MMS1_k127_1601179_3 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 304.0
MMS1_k127_1601179_4 PFAM Domain related to MnhB subunit of Na H antiporter K05566 - - 0.0000000000000000000000000000000000000000000000000000000000000000002113 237.0
MMS1_k127_1601179_5 PFAM Na H ion antiporter subunit K05569 - - 0.00000000000000000000000000000000000002637 150.0
MMS1_k127_1601179_6 Protein of unknown function (DUF2442) - - - 0.00000000000000000000000000000000000007914 147.0
MMS1_k127_1601179_7 monovalent cation proton antiporter, MnhG PhaG subunit - - - 0.0000000000000000000000002253 109.0
MMS1_k127_1601179_8 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.000000000000000000000004353 116.0
MMS1_k127_1601179_9 Domain of unknown function (DUF4040) - - - 0.000000000000003259 85.0
MMS1_k127_1615168_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 4.165e-250 784.0
MMS1_k127_1615168_1 AcrB/AcrD/AcrF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 544.0
MMS1_k127_1615168_10 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000002076 200.0
MMS1_k127_1615168_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000001245 151.0
MMS1_k127_1615168_12 Peptidase S24-like - - - 0.000000000000000000000000000001656 131.0
MMS1_k127_1615168_13 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000002826 124.0
MMS1_k127_1615168_14 - - - - 0.00004721 55.0
MMS1_k127_1615168_2 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 381.0
MMS1_k127_1615168_3 Terminase RNaseH-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000801 353.0
MMS1_k127_1615168_4 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 343.0
MMS1_k127_1615168_5 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 299.0
MMS1_k127_1615168_6 Serine hydrolase K07002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005451 255.0
MMS1_k127_1615168_7 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000009772 243.0
MMS1_k127_1615168_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000001114 220.0
MMS1_k127_1615168_9 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.0000000000000000000000000000000000000000000000000000000003666 203.0
MMS1_k127_1624044_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1067.0
MMS1_k127_1624044_1 Belongs to the glycosyl hydrolase 57 family - - - 4.179e-251 781.0
MMS1_k127_1624044_11 Invasion associated locus B - - - 0.0002521 51.0
MMS1_k127_1624044_12 Domain of unknown function (DUF4912) K09942 - - 0.0002586 53.0
MMS1_k127_1624044_2 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 4.223e-246 781.0
MMS1_k127_1624044_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 1.054e-239 748.0
MMS1_k127_1624044_4 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 542.0
MMS1_k127_1624044_5 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 494.0
MMS1_k127_1624044_6 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 401.0
MMS1_k127_1624044_7 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 319.0
MMS1_k127_1624044_8 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 292.0
MMS1_k127_1624044_9 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000004083 199.0
MMS1_k127_1624725_0 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 420.0
MMS1_k127_1624725_1 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 327.0
MMS1_k127_1624725_2 cheY-homologous receiver domain K03413 - - 0.00000000004758 72.0
MMS1_k127_1624725_3 Domain of unknown function (DUF1476) - - - 0.0000000002934 70.0
MMS1_k127_163270_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 471.0
MMS1_k127_163270_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004381 279.0
MMS1_k127_163270_2 belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000004639 217.0
MMS1_k127_163270_3 protein-(glutamine-N5) methyltransferase activity K21786 - - 0.00000000000000000000000000000000000000000000002593 183.0
MMS1_k127_163270_4 Nitrile hydratase - - - 0.000000005089 63.0
MMS1_k127_163270_5 Nitrile hydratase - - - 0.0000007591 59.0
MMS1_k127_1642431_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 3.039e-203 662.0
MMS1_k127_1642431_1 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 2.513e-198 628.0
MMS1_k127_1642431_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 404.0
MMS1_k127_1642431_11 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008192 383.0
MMS1_k127_1642431_12 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 339.0
MMS1_k127_1642431_13 Chaperone SurA K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 336.0
MMS1_k127_1642431_14 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 308.0
MMS1_k127_1642431_15 methyl-accepting chemotaxis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 301.0
MMS1_k127_1642431_16 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008135 238.0
MMS1_k127_1642431_17 COG2202 FOG PAS PAC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003749 233.0
MMS1_k127_1642431_18 methyl-accepting chemotaxis protein - - - 0.0000000000000000000000000000000000000000000000000000000002234 218.0
MMS1_k127_1642431_19 4Fe-4S dicluster domain - - - 0.000000000000000000000000006911 111.0
MMS1_k127_1642431_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 605.0
MMS1_k127_1642431_20 transposase activity - - - 0.00000000000000000000000009847 123.0
MMS1_k127_1642431_21 Phasin protein - - - 0.000000000000000000399 93.0
MMS1_k127_1642431_3 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 571.0
MMS1_k127_1642431_4 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 559.0
MMS1_k127_1642431_5 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 528.0
MMS1_k127_1642431_6 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 461.0
MMS1_k127_1642431_7 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 414.0
MMS1_k127_1642431_8 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 415.0
MMS1_k127_1642431_9 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 403.0
MMS1_k127_1648736_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1e-323 999.0
MMS1_k127_1648736_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 4.014e-319 994.0
MMS1_k127_1648736_10 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 542.0
MMS1_k127_1648736_11 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 511.0
MMS1_k127_1648736_12 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 514.0
MMS1_k127_1648736_13 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 486.0
MMS1_k127_1648736_14 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 456.0
MMS1_k127_1648736_15 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 470.0
MMS1_k127_1648736_16 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 462.0
MMS1_k127_1648736_17 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 454.0
MMS1_k127_1648736_18 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 452.0
MMS1_k127_1648736_19 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 448.0
MMS1_k127_1648736_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.114e-245 766.0
MMS1_k127_1648736_20 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 421.0
MMS1_k127_1648736_21 protein conserved in bacteria K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 385.0
MMS1_k127_1648736_22 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 381.0
MMS1_k127_1648736_23 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 365.0
MMS1_k127_1648736_24 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 335.0
MMS1_k127_1648736_25 oxygen carrier activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 344.0
MMS1_k127_1648736_26 COG2041 Sulfite oxidase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 321.0
MMS1_k127_1648736_27 Glycosyl hydrolases family 25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 312.0
MMS1_k127_1648736_28 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 310.0
MMS1_k127_1648736_29 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 303.0
MMS1_k127_1648736_3 COG1042 Acyl-CoA synthetase (NDP forming) K09181 - - 1.82e-230 739.0
MMS1_k127_1648736_30 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 292.0
MMS1_k127_1648736_31 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 284.0
MMS1_k127_1648736_32 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003046 276.0
MMS1_k127_1648736_33 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000003488 249.0
MMS1_k127_1648736_34 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000001513 250.0
MMS1_k127_1648736_35 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000487 251.0
MMS1_k127_1648736_37 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000005818 235.0
MMS1_k127_1648736_38 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000001377 198.0
MMS1_k127_1648736_39 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000003185 187.0
MMS1_k127_1648736_4 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 9.99e-216 673.0
MMS1_k127_1648736_40 NikR C terminal nickel binding domain K07722 - - 0.00000000000000000000000000000000000000000000001134 186.0
MMS1_k127_1648736_41 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000007873 173.0
MMS1_k127_1648736_42 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.000000000000000000000000000000000000000001315 164.0
MMS1_k127_1648736_43 Sulfurtransferase TusA - - - 0.00000000000000000000000000000000788 128.0
MMS1_k127_1648736_44 COG2825 Outer membrane protein - - - 0.00000000000000000000000003584 117.0
MMS1_k127_1648736_45 Redoxin - - - 0.00000000000000000000000009353 111.0
MMS1_k127_1648736_47 Heavy-metal-associated domain K07213 - - 0.00000000000000001523 89.0
MMS1_k127_1648736_5 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.077e-214 672.0
MMS1_k127_1648736_6 phosphate acetyltransferase K00625,K00634 - 2.3.1.19,2.3.1.8 1.711e-212 673.0
MMS1_k127_1648736_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 4.216e-197 637.0
MMS1_k127_1648736_8 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 563.0
MMS1_k127_1648736_9 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 530.0
MMS1_k127_1651256_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 4.125e-264 821.0
MMS1_k127_1651256_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 569.0
MMS1_k127_1651256_2 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007589 288.0
MMS1_k127_1677263_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 588.0
MMS1_k127_1677263_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 473.0
MMS1_k127_1677263_2 Methyltransferase small domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001342 280.0
MMS1_k127_1677263_3 glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008243 282.0
MMS1_k127_1677263_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000002724 261.0
MMS1_k127_1677263_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001138 263.0
MMS1_k127_1677263_6 Histidine kinase K07716 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000004335 221.0
MMS1_k127_1677263_7 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000007233 119.0
MMS1_k127_16795_0 signal transduction histidine kinase K13587 - 2.7.13.3 0.0 1081.0
MMS1_k127_16795_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 496.0
MMS1_k127_16795_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000003076 123.0
MMS1_k127_16795_11 - - - - 0.000000000000000000000000000799 125.0
MMS1_k127_16795_12 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000001859 117.0
MMS1_k127_16795_13 Flagellar biosynthetic protein FliQ K02420 - - 0.000000000000000000000008057 103.0
MMS1_k127_16795_14 Flagellar hook-basal body K02408 - - 0.0000000000000000000000724 102.0
MMS1_k127_16795_15 Flagellar biosynthesis protein, FliO K02418 - - 0.0000000000000000001863 92.0
MMS1_k127_16795_16 - - - - 0.00000000000001151 83.0
MMS1_k127_16795_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 383.0
MMS1_k127_16795_3 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 319.0
MMS1_k127_16795_4 Flagellar biosynthetic protein FliR K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004603 263.0
MMS1_k127_16795_5 COG0517 FOG CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000019 205.0
MMS1_k127_16795_6 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000000000000006033 192.0
MMS1_k127_16795_7 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000005006 181.0
MMS1_k127_16795_8 17 kDa outer membrane surface antigen - - - 0.000000000000000000000000000000000000000000000009904 184.0
MMS1_k127_16795_9 homolog of the cytoplasmic domain of flagellar protein FhlB K04061 - - 0.00000000000000000000000000000001196 130.0
MMS1_k127_1703849_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009319,GO:0009486,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016491,GO:0019646,GO:0020037,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0043167,GO:0043169,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901363,GO:1902494,GO:1902600 1.10.3.10,1.9.3.1 2.753e-312 967.0
MMS1_k127_1703849_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 3.353e-248 777.0
MMS1_k127_1703849_10 Ubiquinol oxidase subunit 2 K02297 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009486,GO:0009897,GO:0009986,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0071575,GO:0071704,GO:0071944,GO:0072521,GO:0098552,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1902600 1.10.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 335.0
MMS1_k127_1703849_11 COG1177 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 343.0
MMS1_k127_1703849_12 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 325.0
MMS1_k127_1703849_13 cytochrome o ubiquinol oxidase, subunit III K02299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004568 269.0
MMS1_k127_1703849_14 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000003055 267.0
MMS1_k127_1703849_15 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001568 252.0
MMS1_k127_1703849_18 methyltransferase activity - - - 0.000000000000000000000000000000000000000000006197 171.0
MMS1_k127_1703849_19 Rhodanese Homology Domain - - - 0.00000000000000000000000000002003 121.0
MMS1_k127_1703849_2 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 1.698e-218 689.0
MMS1_k127_1703849_20 addiction module antidote protein HigA K21498 - - 0.0000000000000000000001457 100.0
MMS1_k127_1703849_22 Cytochrome O ubiquinol oxidase K02300 - - 0.000000000000000000007335 101.0
MMS1_k127_1703849_23 - - - - 0.000000000007195 74.0
MMS1_k127_1703849_3 COG0616 Periplasmic serine proteases (ClpP class) K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 547.0
MMS1_k127_1703849_4 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 464.0
MMS1_k127_1703849_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 430.0
MMS1_k127_1703849_6 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 414.0
MMS1_k127_1703849_7 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 407.0
MMS1_k127_1703849_8 Putrescine transport system permease K11075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 381.0
MMS1_k127_1703849_9 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 361.0
MMS1_k127_1831537_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 2.473e-260 823.0
MMS1_k127_1831537_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 3.148e-212 666.0
MMS1_k127_1831537_10 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000005269 157.0
MMS1_k127_1831537_11 - - - - 0.00000000000000000000000000000000000001397 150.0
MMS1_k127_1831537_12 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000006122 126.0
MMS1_k127_1831537_13 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000008844 51.0
MMS1_k127_1831537_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 524.0
MMS1_k127_1831537_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 490.0
MMS1_k127_1831537_4 Glycine cleavage system T protein K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 481.0
MMS1_k127_1831537_5 Cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 420.0
MMS1_k127_1831537_6 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 398.0
MMS1_k127_1831537_7 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002305 262.0
MMS1_k127_1831537_8 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000007498 214.0
MMS1_k127_1831537_9 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000001621 181.0
MMS1_k127_1835481_0 Evidence 4 Homologs of previously reported genes of - - - 3.663e-248 806.0
MMS1_k127_1835481_1 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 1.678e-198 622.0
MMS1_k127_1835481_10 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 337.0
MMS1_k127_1835481_11 COG3143 Chemotaxis protein K03414 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 290.0
MMS1_k127_1835481_12 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000001335 265.0
MMS1_k127_1835481_13 COG0784 FOG CheY-like receiver K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002347 239.0
MMS1_k127_1835481_14 PFAM MgtE intracellular - - - 0.000000000000000000000000000000000000000000000000000000000009112 215.0
MMS1_k127_1835481_15 - - - - 0.000000000000000000000000000000000000000000000000000001342 201.0
MMS1_k127_1835481_16 Glycosyl transferases group 1 - - - 0.0000000000000000000000000006225 126.0
MMS1_k127_1835481_17 - - - - 0.000000000000000000000000003172 121.0
MMS1_k127_1835481_18 - - - - 0.00000000000000000000003491 107.0
MMS1_k127_1835481_19 - - - - 0.00000000000000000000003581 109.0
MMS1_k127_1835481_2 Chain length determinant protein K16554 - - 8.404e-195 622.0
MMS1_k127_1835481_20 MviN-like protein K03980 - - 0.000001001 61.0
MMS1_k127_1835481_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 493.0
MMS1_k127_1835481_4 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 490.0
MMS1_k127_1835481_5 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 445.0
MMS1_k127_1835481_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 424.0
MMS1_k127_1835481_7 PFAM NAD-dependent epimerase dehydratase K06118 - 3.13.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 403.0
MMS1_k127_1835481_8 Asparagine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 401.0
MMS1_k127_1835481_9 ABC transporter transmembrane region K06148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 357.0
MMS1_k127_1853060_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 502.0
MMS1_k127_1853060_1 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 461.0
MMS1_k127_1853060_2 COG2202 FOG PAS PAC domain K03406,K03776 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 437.0
MMS1_k127_1853060_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 409.0
MMS1_k127_1858309_0 Binding-protein-dependent transport system inner membrane component K02050 - - 5.806e-279 868.0
MMS1_k127_1858309_1 C-terminal AAA-associated domain K02049 - - 1.874e-214 673.0
MMS1_k127_1858309_10 - - - - 0.00000000000000000000000000000000000000000000000000000001047 199.0
MMS1_k127_1858309_11 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000001203 189.0
MMS1_k127_1858309_12 cysteine dioxygenase - - - 0.000000000000000000000000000000000000000000000008849 179.0
MMS1_k127_1858309_13 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000001063 171.0
MMS1_k127_1858309_14 Protein of unknown function (DUF2726) - - - 0.0000000000000000000000000000001198 132.0
MMS1_k127_1858309_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 420.0
MMS1_k127_1858309_3 SMART Tetratricopeptide domain protein K03654,K11935,K14949,K21007 - 2.7.11.1,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 391.0
MMS1_k127_1858309_4 PFAM conserved K02069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 303.0
MMS1_k127_1858309_5 Pfam Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004604 271.0
MMS1_k127_1858309_6 LysR family transcription regulator protein K10918 - - 0.000000000000000000000000000000000000000000000000000000000000000000003388 245.0
MMS1_k127_1858309_7 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000001101 221.0
MMS1_k127_1858309_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000009706 233.0
MMS1_k127_1858309_9 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000134 207.0
MMS1_k127_187251_0 Putative diguanylate phosphodiesterase - - - 0.0 1050.0
MMS1_k127_187251_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 7.596e-258 799.0
MMS1_k127_187251_10 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 537.0
MMS1_k127_187251_11 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 482.0
MMS1_k127_187251_12 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 467.0
MMS1_k127_187251_13 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 440.0
MMS1_k127_187251_14 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 383.0
MMS1_k127_187251_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 365.0
MMS1_k127_187251_16 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 342.0
MMS1_k127_187251_17 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 329.0
MMS1_k127_187251_18 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 310.0
MMS1_k127_187251_19 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 300.0
MMS1_k127_187251_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.405e-254 797.0
MMS1_k127_187251_20 Polyhydroxyalkanoate synthesis repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005645 266.0
MMS1_k127_187251_21 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000003681 240.0
MMS1_k127_187251_22 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000000000000000001508 235.0
MMS1_k127_187251_23 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000000000000002124 219.0
MMS1_k127_187251_24 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000000000000000000002106 176.0
MMS1_k127_187251_25 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000001951 170.0
MMS1_k127_187251_26 - - - - 0.0000000000000000000000000005502 124.0
MMS1_k127_187251_27 - - - - 0.0000000000002967 76.0
MMS1_k127_187251_28 Cytochrome c - - - 0.000000000007728 70.0
MMS1_k127_187251_3 Belongs to the GPI family K01810 - 5.3.1.9 3.437e-254 803.0
MMS1_k127_187251_4 flagellum-specific ATP synthase K02412 - 3.6.3.14 1.352e-246 767.0
MMS1_k127_187251_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 2.43e-233 730.0
MMS1_k127_187251_6 COG2202 FOG PAS PAC domain - - - 7.974e-229 720.0
MMS1_k127_187251_7 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 1.093e-200 629.0
MMS1_k127_187251_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 2.392e-196 629.0
MMS1_k127_187251_9 GDP-mannose 4,6 dehydratase K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 546.0
MMS1_k127_1896169_0 NAD-specific glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1671.0
MMS1_k127_1896169_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1372.0
MMS1_k127_1896169_10 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 509.0
MMS1_k127_1896169_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 499.0
MMS1_k127_1896169_12 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 496.0
MMS1_k127_1896169_13 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 466.0
MMS1_k127_1896169_14 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 457.0
MMS1_k127_1896169_15 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 453.0
MMS1_k127_1896169_16 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 447.0
MMS1_k127_1896169_17 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 413.0
MMS1_k127_1896169_18 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 412.0
MMS1_k127_1896169_19 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 406.0
MMS1_k127_1896169_2 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 0.0 1030.0
MMS1_k127_1896169_20 Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 407.0
MMS1_k127_1896169_21 protein histidine kinase activity K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 438.0
MMS1_k127_1896169_22 COG0708 Exonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 402.0
MMS1_k127_1896169_23 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 400.0
MMS1_k127_1896169_24 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 405.0
MMS1_k127_1896169_25 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 380.0
MMS1_k127_1896169_26 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 354.0
MMS1_k127_1896169_27 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 346.0
MMS1_k127_1896169_28 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 347.0
MMS1_k127_1896169_29 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 337.0
MMS1_k127_1896169_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.544e-280 877.0
MMS1_k127_1896169_30 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851,K13007 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624 304.0
MMS1_k127_1896169_31 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003164 279.0
MMS1_k127_1896169_32 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000003367 258.0
MMS1_k127_1896169_33 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000001242 253.0
MMS1_k127_1896169_34 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000001061 241.0
MMS1_k127_1896169_35 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000001134 241.0
MMS1_k127_1896169_36 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000003473 225.0
MMS1_k127_1896169_37 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000009651 245.0
MMS1_k127_1896169_38 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000009961 228.0
MMS1_k127_1896169_39 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000007301 223.0
MMS1_k127_1896169_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.411e-260 805.0
MMS1_k127_1896169_40 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000452 218.0
MMS1_k127_1896169_41 belongs to the thioredoxin family - - - 0.000000000000000000000000000000000000000000000000000000000000167 224.0
MMS1_k127_1896169_42 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000004977 213.0
MMS1_k127_1896169_43 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000009479 215.0
MMS1_k127_1896169_44 protein conserved in bacteria K09858 - - 0.0000000000000000000000000000000000000000000000000000000000176 218.0
MMS1_k127_1896169_45 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000001749 206.0
MMS1_k127_1896169_46 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000003271 202.0
MMS1_k127_1896169_47 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000271 199.0
MMS1_k127_1896169_48 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000000002582 194.0
MMS1_k127_1896169_49 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000003598 186.0
MMS1_k127_1896169_5 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 3.896e-237 752.0
MMS1_k127_1896169_50 Ferredoxin, 2Fe-2S - - - 0.000000000000000000000000000000000000000000000001022 181.0
MMS1_k127_1896169_51 - - - - 0.000000000000000000000000000000000000000000000001707 181.0
MMS1_k127_1896169_52 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000003909 171.0
MMS1_k127_1896169_53 COG3030 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.000000000000000000000000000000000007546 141.0
MMS1_k127_1896169_54 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000001155 145.0
MMS1_k127_1896169_55 - - - - 0.0000000000000000000000000000000007108 136.0
MMS1_k127_1896169_56 domain, Protein - - - 0.000000000000000000000000000002433 124.0
MMS1_k127_1896169_57 Lipopolysaccharide-assembly K03643 - - 0.000000000000000000000000007881 117.0
MMS1_k127_1896169_58 - - - - 0.0000000000000000000000002912 118.0
MMS1_k127_1896169_59 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000001062 104.0
MMS1_k127_1896169_6 PFAM ABC transporter K02471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 610.0
MMS1_k127_1896169_60 - - - - 0.0000004217 59.0
MMS1_k127_1896169_7 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 581.0
MMS1_k127_1896169_8 COG0436 Aspartate tyrosine aromatic aminotransferase K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 551.0
MMS1_k127_1896169_9 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 543.0
MMS1_k127_1903575_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 2.089e-308 961.0
MMS1_k127_1903575_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.118e-301 930.0
MMS1_k127_1903575_2 COG3264 Small-conductance mechanosensitive channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 411.0
MMS1_k127_1903575_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 335.0
MMS1_k127_1903575_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.000000000000000000000000000000000000000000000000000000000000263 214.0
MMS1_k127_1903575_5 Tautomerase enzyme - - - 0.0000000000000000000000000000000000002585 144.0
MMS1_k127_1917960_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1260.0
MMS1_k127_1917960_1 Phosphoesterase family K01114 - 3.1.4.3 7.748e-262 818.0
MMS1_k127_1917960_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 591.0
MMS1_k127_1917960_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 590.0
MMS1_k127_1917960_4 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 574.0
MMS1_k127_1917960_5 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 472.0
MMS1_k127_1917960_6 Fic/DOC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 425.0
MMS1_k127_1917960_7 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 325.0
MMS1_k127_1917960_8 O-antigen ligase like membrane protein - - - 0.00000000000000005778 94.0
MMS1_k127_1917960_9 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000006527 69.0
MMS1_k127_1929600_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.446e-260 808.0
MMS1_k127_1929600_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 3.772e-241 753.0
MMS1_k127_1929600_10 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000005741 240.0
MMS1_k127_1929600_11 membrane protein, required for colicin V production K03558 - - 0.000000000000000000000000000000000000000000000021 178.0
MMS1_k127_1929600_12 - - - - 0.00000000000000000000000000000000000000000000007259 182.0
MMS1_k127_1929600_13 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000002961 166.0
MMS1_k127_1929600_14 DsrE/DsrF-like family K09004 - - 0.000000000000000000000002424 110.0
MMS1_k127_1929600_15 DsrE/DsrF-like family K09004 - - 0.00000000000000004304 88.0
MMS1_k127_1929600_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 9.695e-226 706.0
MMS1_k127_1929600_3 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 509.0
MMS1_k127_1929600_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 433.0
MMS1_k127_1929600_5 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 420.0
MMS1_k127_1929600_6 oxygen carrier activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 425.0
MMS1_k127_1929600_7 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 413.0
MMS1_k127_1929600_8 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 GO:0000156,GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0023052,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 344.0
MMS1_k127_1929600_9 signal transduction Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 342.0
MMS1_k127_1945887_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.174e-195 612.0
MMS1_k127_1945887_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 432.0
MMS1_k127_1945887_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 408.0
MMS1_k127_1964255_0 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.385e-309 954.0
MMS1_k127_1964255_1 Domain of unknown function (DUF3364) K02591 - 1.18.6.1 6.808e-308 947.0
MMS1_k127_1964255_10 Ferredoxin III - - - 0.00000000000000000000000000000000000000000000000631 172.0
MMS1_k127_1964255_11 Protein of unknown function (DUF2000) - - - 0.000000000000000000000000000000000000000001161 161.0
MMS1_k127_1964255_12 - - - - 0.000000000000000000000000009198 112.0
MMS1_k127_1964255_13 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000003864 98.0
MMS1_k127_1964255_14 - - - - 0.0000001062 60.0
MMS1_k127_1964255_2 protein alpha chain K02586 - 1.18.6.1 3.369e-299 917.0
MMS1_k127_1964255_3 Nitrogenase component 1 type Oxidoreductase K02592 - - 4.702e-218 685.0
MMS1_k127_1964255_4 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 297.0
MMS1_k127_1964255_5 Protein of unknown function, DUF269 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001412 244.0
MMS1_k127_1964255_6 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005499 240.0
MMS1_k127_1964255_7 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.000000000000000000000000000000000000000000000000000000000000000004882 229.0
MMS1_k127_1964255_8 NifQ K15790 - - 0.000000000000000000000000000000000000000000000000000000009448 205.0
MMS1_k127_1964255_9 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000006071 194.0
MMS1_k127_1965772_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 8.564e-302 933.0
MMS1_k127_1965772_1 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K16846 - 4.4.1.24 5.564e-229 715.0
MMS1_k127_1965772_10 transcriptional K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004132 264.0
MMS1_k127_1965772_11 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000418 251.0
MMS1_k127_1965772_12 SAF K16845 - 4.4.1.24 0.00000000000000000000000000000000000000000005564 164.0
MMS1_k127_1965772_13 Glycine-zipper domain - - - 0.000000000000000000000000000007921 133.0
MMS1_k127_1965772_2 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 441.0
MMS1_k127_1965772_3 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 405.0
MMS1_k127_1965772_4 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 395.0
MMS1_k127_1965772_5 abc transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 394.0
MMS1_k127_1965772_6 Fe-S type, tartrate fumarate subfamily, alpha subunit K03779 - 4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 386.0
MMS1_k127_1965772_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 374.0
MMS1_k127_1965772_8 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 336.0
MMS1_k127_1965772_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 300.0
MMS1_k127_1975944_0 single-stranded-DNA-specific exonuclease recJ K07462 - - 1.303e-276 865.0
MMS1_k127_1975944_1 COG1494 Fructose-1,6-bisphosphatase sedoheptulose 1,7-bisphosphatase and related proteins K11532 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 435.0
MMS1_k127_1975944_10 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000001446 122.0
MMS1_k127_1975944_11 Uncharacterized protein conserved in bacteria (DUF2076) K09945 - - 0.00000000000000000000000000003255 126.0
MMS1_k127_1975944_12 - - - - 0.0000000000000000000001653 102.0
MMS1_k127_1975944_13 Protein of unknown function (DUF2892) - - - 0.0000000000003496 72.0
MMS1_k127_1975944_14 - - - - 0.000000000004063 74.0
MMS1_k127_1975944_15 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000004805 64.0
MMS1_k127_1975944_2 Lysophospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 346.0
MMS1_k127_1975944_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000962 302.0
MMS1_k127_1975944_4 Cyclin-dependent kinase inhibitor 3 (CDKN3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007666 278.0
MMS1_k127_1975944_5 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.00000000000000000000000000000000000000000000000000000000000135 216.0
MMS1_k127_1975944_6 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000008871 215.0
MMS1_k127_1975944_7 Uncharacterized protein conserved in bacteria (DUF2125) - - - 0.0000000000000000000000000000000000000000000000000000002282 209.0
MMS1_k127_1975944_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000005845 203.0
MMS1_k127_1975944_9 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000001449 192.0
MMS1_k127_1976818_0 aminopeptidase K01262 - 3.4.11.9 8.711e-227 718.0
MMS1_k127_1976818_1 ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 411.0
MMS1_k127_1984576_0 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008192 550.0
MMS1_k127_1984576_1 Phosphoribulokinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 522.0
MMS1_k127_1984576_10 protein conserved in bacteria K09990 - - 0.000000000008959 68.0
MMS1_k127_1984576_2 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 486.0
MMS1_k127_1984576_3 Beta-lactamase superfamily domain K03476 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 394.0
MMS1_k127_1984576_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 403.0
MMS1_k127_1984576_5 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000006059 250.0
MMS1_k127_1984576_6 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000000000000000000003892 162.0
MMS1_k127_1984576_7 - - - - 0.000000000000000000000000000000000162 137.0
MMS1_k127_1984576_8 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000002249 95.0
MMS1_k127_1984576_9 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.00000000000000006007 81.0
MMS1_k127_2004892_0 COG0841 Cation multidrug efflux pump - - - 1.847e-302 939.0
MMS1_k127_2004892_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 382.0
MMS1_k127_2004892_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 383.0
MMS1_k127_2004892_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 365.0
MMS1_k127_2004892_4 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005528 228.0
MMS1_k127_2004892_5 Belongs to the 4-oxalocrotonate tautomerase family K01821 - 5.3.2.6 0.00000000000000000000000000003777 118.0
MMS1_k127_200800_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1387.0
MMS1_k127_200800_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07789 - - 0.0 1185.0
MMS1_k127_200800_10 PFAM Tail Collar domain protein - - - 0.00000000000000000000000000000000000000004007 158.0
MMS1_k127_200800_11 Tail Collar domain protein - - - 0.000000000000000000000000000000000000008463 152.0
MMS1_k127_200800_12 Microcystin-dependent protein - - - 0.0000000000000000000000000000000000005091 147.0
MMS1_k127_200800_14 - - - - 0.00000000000000000001591 96.0
MMS1_k127_200800_15 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000001908 83.0
MMS1_k127_200800_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 446.0
MMS1_k127_200800_3 COG0859 ADP-heptose LPS heptosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 412.0
MMS1_k127_200800_4 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 380.0
MMS1_k127_200800_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 355.0
MMS1_k127_200800_6 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 332.0
MMS1_k127_200800_7 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 347.0
MMS1_k127_200800_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 316.0
MMS1_k127_200800_9 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 292.0
MMS1_k127_2049595_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1281.0
MMS1_k127_2049595_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 1.664e-305 948.0
MMS1_k127_2049595_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000007186 176.0
MMS1_k127_2049595_11 Protein of unknown function (DUF3223) - - - 0.00000000000000000000000000001257 121.0
MMS1_k127_2049595_12 Usg-like family - - - 0.00000000000000000000000000284 114.0
MMS1_k127_2049595_13 - - - - 0.0000000000000000005476 87.0
MMS1_k127_2049595_15 - - - - 0.000000000000001809 79.0
MMS1_k127_2049595_16 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.000000273 58.0
MMS1_k127_2049595_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 9.48e-303 934.0
MMS1_k127_2049595_3 Polyphosphate kinase 2 (PPK2) - - - 1.34e-234 735.0
MMS1_k127_2049595_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 1.105e-206 656.0
MMS1_k127_2049595_5 Belongs to the GARS family K01945 - 6.3.4.13 1.071e-202 638.0
MMS1_k127_2049595_6 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 382.0
MMS1_k127_2049595_7 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 323.0
MMS1_k127_2049595_8 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000000000003191 182.0
MMS1_k127_2049595_9 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000005392 187.0
MMS1_k127_2053177_0 Diguanylate cyclase phosphodiesterase with PAS PAC and GAF sensor(S) - - - 9.737e-208 685.0
MMS1_k127_2053177_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 314.0
MMS1_k127_2053177_2 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000014 299.0
MMS1_k127_2053177_3 DMSO reductase anchor subunit K21309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005482 277.0
MMS1_k127_2053177_4 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000002898 243.0
MMS1_k127_2053177_6 Serine hydrolase - - - 0.000000000000000009135 98.0
MMS1_k127_2067362_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 481.0
MMS1_k127_2067362_1 dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 384.0
MMS1_k127_2067362_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 362.0
MMS1_k127_2067362_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000007413 207.0
MMS1_k127_2067362_4 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000008523 140.0
MMS1_k127_2067362_5 - - - - 0.00000000000000000000000000000002261 139.0
MMS1_k127_2067362_6 - - - - 0.00000000000000000000000000000006535 137.0
MMS1_k127_2067362_7 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000002961 84.0
MMS1_k127_2074055_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0 1381.0
MMS1_k127_2074055_1 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 1.397e-240 749.0
MMS1_k127_2074055_10 COG0784 FOG CheY-like receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000003537 228.0
MMS1_k127_2074055_11 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.000000000000000000000000000000000000000000000000000000000001369 214.0
MMS1_k127_2074055_12 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000001723 186.0
MMS1_k127_2074055_13 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000001942 182.0
MMS1_k127_2074055_14 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000003391 165.0
MMS1_k127_2074055_2 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 588.0
MMS1_k127_2074055_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 543.0
MMS1_k127_2074055_4 Na+ dependent nucleoside transporter C-terminus K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 544.0
MMS1_k127_2074055_5 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 490.0
MMS1_k127_2074055_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 398.0
MMS1_k127_2074055_7 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 380.0
MMS1_k127_2074055_8 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 353.0
MMS1_k127_2074055_9 COG0835 Chemotaxis signal transduction protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009309 268.0
MMS1_k127_2115420_0 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 475.0
MMS1_k127_2115420_1 CRISPR-associated protein Cse1 (CRISPR_cse1) K19123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 439.0
MMS1_k127_2115420_2 CRISPR-associated protein, Cse4 K19124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 421.0
MMS1_k127_2115420_3 CRISPR-associated protein Cse3 K19126 - - 0.00000000000000000000000000000000000000000000000009318 193.0
MMS1_k127_2115420_4 - - - - 0.00000000000000000000000000000000000000000001207 169.0
MMS1_k127_2115420_5 CRISPR-associated protein Cas5 K19125 - - 0.0000000000000000000000000000000000000000009157 167.0
MMS1_k127_2115420_6 CRISPR-associated protein (Cas_Cas2CT1978) K09951 - - 0.00000000000000000000000000002769 123.0
MMS1_k127_2115420_8 - - - - 0.00003714 49.0
MMS1_k127_2143824_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.387e-272 846.0
MMS1_k127_2143824_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 9.036e-244 756.0
MMS1_k127_2143824_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 3.808e-208 651.0
MMS1_k127_2143824_3 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 414.0
MMS1_k127_2151477_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1294.0
MMS1_k127_2151477_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 4.149e-227 711.0
MMS1_k127_2151477_2 COG1520 FOG WD40-like repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007226 553.0
MMS1_k127_2151477_3 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 323.0
MMS1_k127_2151477_4 Tetratricopeptide repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000001877 196.0
MMS1_k127_2158604_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.271e-210 659.0
MMS1_k127_2158604_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 9.022e-199 638.0
MMS1_k127_2158604_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 467.0
MMS1_k127_2158604_3 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 411.0
MMS1_k127_2158604_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 396.0
MMS1_k127_2158604_5 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008172 289.0
MMS1_k127_2158604_6 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006995 254.0
MMS1_k127_2172467_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1368.0
MMS1_k127_2172467_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.955e-238 752.0
MMS1_k127_2172467_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.071e-233 726.0
MMS1_k127_2172467_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 538.0
MMS1_k127_2172467_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 359.0
MMS1_k127_2172467_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 341.0
MMS1_k127_2172467_6 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001517 279.0
MMS1_k127_2172467_7 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000007544 219.0
MMS1_k127_2172467_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000005806 152.0
MMS1_k127_2186353_0 4Fe-4S dicluster domain K06911 - - 8.118e-231 721.0
MMS1_k127_2186353_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 523.0
MMS1_k127_2186353_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 313.0
MMS1_k127_2186353_3 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 291.0
MMS1_k127_2186353_4 Methyltransferase small domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006903 277.0
MMS1_k127_2186353_5 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000403 150.0
MMS1_k127_220572_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1810.0
MMS1_k127_220572_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 7.741e-275 860.0
MMS1_k127_220572_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 2.633e-222 704.0
MMS1_k127_220572_3 Belongs to the CarA family K01956 - 6.3.5.5 3.45e-198 625.0
MMS1_k127_220572_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 350.0
MMS1_k127_220572_5 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 342.0
MMS1_k127_220572_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002137 279.0
MMS1_k127_220572_7 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003511 284.0
MMS1_k127_220572_8 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000000005769 201.0
MMS1_k127_2215303_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.527e-235 734.0
MMS1_k127_2215303_1 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 489.0
MMS1_k127_2215303_2 protein conserved in bacteria K09778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 345.0
MMS1_k127_2215303_3 Protein tyrosine serine phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005702 278.0
MMS1_k127_2215303_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000001888 120.0
MMS1_k127_2215303_5 COG0147 Anthranilate para-aminobenzoate synthases component I K01665,K13950 - 2.6.1.85 0.0000000000000004418 81.0
MMS1_k127_2236188_0 COG0841 Cation multidrug efflux pump - - - 7.792e-207 653.0
MMS1_k127_2236188_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 304.0
MMS1_k127_2244627_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 583.0
MMS1_k127_2244627_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 527.0
MMS1_k127_2244627_10 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000001201 195.0
MMS1_k127_2244627_11 negative regulation of bacterial-type flagellum assembly K06601 - - 0.000000000000000000000000000000000002908 141.0
MMS1_k127_2244627_12 Flagellar protein FlaF K06602 - - 0.000000000000000000000000000007627 123.0
MMS1_k127_2244627_13 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.0000000000000000001066 89.0
MMS1_k127_2244627_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007678 561.0
MMS1_k127_2244627_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 527.0
MMS1_k127_2244627_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 467.0
MMS1_k127_2244627_5 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 430.0
MMS1_k127_2244627_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 466.0
MMS1_k127_2244627_7 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 338.0
MMS1_k127_2244627_8 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 329.0
MMS1_k127_2244627_9 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000004436 248.0
MMS1_k127_2244729_0 Domain of unknown function (DUF3362) - - - 1.859e-232 726.0
MMS1_k127_2244729_1 Histidine kinase K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 423.0
MMS1_k127_2244729_10 PFAM response regulator receiver - - - 0.000000000000000000000006867 106.0
MMS1_k127_2244729_11 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.0000000000000000001066 89.0
MMS1_k127_2244729_2 lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 374.0
MMS1_k127_2244729_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 371.0
MMS1_k127_2244729_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 290.0
MMS1_k127_2244729_5 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008236 288.0
MMS1_k127_2244729_6 part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes - - - 0.000000000000000000000000000000000000000000000000000000000002515 220.0
MMS1_k127_2244729_7 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000000000000002261 170.0
MMS1_k127_2244729_8 Part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000007705 136.0
MMS1_k127_2244729_9 LrgA family K06518 - - 0.00000000000000000000000000000004069 130.0
MMS1_k127_2245953_0 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 1.79e-230 726.0
MMS1_k127_2245953_1 Four helix bundle sensory module for signal transduction K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 556.0
MMS1_k127_2245953_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406,K05874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002532 294.0
MMS1_k127_2245953_3 CheW-like domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000114 209.0
MMS1_k127_2249826_0 Methionine synthase K00548 - 2.1.1.13 0.0 1825.0
MMS1_k127_2249826_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1173.0
MMS1_k127_2249826_10 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 459.0
MMS1_k127_2249826_11 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006375 449.0
MMS1_k127_2249826_12 NnrS protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 440.0
MMS1_k127_2249826_13 alpha/beta hydrolase fold K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 430.0
MMS1_k127_2249826_14 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 418.0
MMS1_k127_2249826_15 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 423.0
MMS1_k127_2249826_16 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 410.0
MMS1_k127_2249826_17 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 391.0
MMS1_k127_2249826_18 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 379.0
MMS1_k127_2249826_19 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 377.0
MMS1_k127_2249826_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 9.533e-302 938.0
MMS1_k127_2249826_20 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 337.0
MMS1_k127_2249826_21 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 343.0
MMS1_k127_2249826_22 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 322.0
MMS1_k127_2249826_23 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 319.0
MMS1_k127_2249826_24 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000106 287.0
MMS1_k127_2249826_25 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
MMS1_k127_2249826_26 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000000000000000000002501 233.0
MMS1_k127_2249826_27 COG0314 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000005545 230.0
MMS1_k127_2249826_28 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000001027 217.0
MMS1_k127_2249826_29 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000002427 219.0
MMS1_k127_2249826_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 5.8e-249 782.0
MMS1_k127_2249826_30 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000001752 186.0
MMS1_k127_2249826_31 arsenate reductase K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000001165 168.0
MMS1_k127_2249826_32 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.000000000000000000000000000000000000000000006098 171.0
MMS1_k127_2249826_33 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 - - 0.000000000000000000000000000000000000000000006975 170.0
MMS1_k127_2249826_34 YGGT family K02221 - - 0.00000000000000000000000000000000000003217 147.0
MMS1_k127_2249826_35 Autoinducer binding domain - - - 0.000000000000000000000000000000000003351 147.0
MMS1_k127_2249826_36 COG1925 Phosphotransferase system, HPr-related proteins K11189 - - 0.000000000000000000000000000000000163 143.0
MMS1_k127_2249826_37 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000000000008933 122.0
MMS1_k127_2249826_38 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000003031 117.0
MMS1_k127_2249826_39 - - - - 0.00000000000000000000007397 100.0
MMS1_k127_2249826_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 573.0
MMS1_k127_2249826_5 Histidine kinase K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 526.0
MMS1_k127_2249826_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 503.0
MMS1_k127_2249826_7 Mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 517.0
MMS1_k127_2249826_8 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 481.0
MMS1_k127_2249826_9 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 476.0
MMS1_k127_2271906_0 glutamate--cysteine ligase K01919 - 6.3.2.2 2.739e-223 701.0
MMS1_k127_2271906_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 593.0
MMS1_k127_2271906_10 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000000000000002961 173.0
MMS1_k127_2271906_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000000000000003112 173.0
MMS1_k127_2271906_12 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000341 162.0
MMS1_k127_2271906_13 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000427 106.0
MMS1_k127_2271906_14 Chorismate mutase type II K04782 - 4.2.99.21 0.0000000000000000000005671 109.0
MMS1_k127_2271906_15 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000001536 76.0
MMS1_k127_2271906_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004105 580.0
MMS1_k127_2271906_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 557.0
MMS1_k127_2271906_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 292.0
MMS1_k127_2271906_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000003059 252.0
MMS1_k127_2271906_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000003753 232.0
MMS1_k127_2271906_7 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000002158 232.0
MMS1_k127_2271906_8 protein conserved in bacteria K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000007059 215.0
MMS1_k127_2271906_9 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000001206 210.0
MMS1_k127_2283978_0 Peptidase C39 family K06147 - - 6.493e-306 953.0
MMS1_k127_2283978_1 Peptidase C39 family K06147 - - 1.323e-245 790.0
MMS1_k127_2283978_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 337.0
MMS1_k127_2283978_11 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 323.0
MMS1_k127_2283978_12 amino acid K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 316.0
MMS1_k127_2283978_13 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 312.0
MMS1_k127_2283978_14 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 299.0
MMS1_k127_2283978_15 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 294.0
MMS1_k127_2283978_16 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007658 267.0
MMS1_k127_2283978_17 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000002629 235.0
MMS1_k127_2283978_18 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000006431 231.0
MMS1_k127_2283978_19 17 kDa outer membrane surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000001776 211.0
MMS1_k127_2283978_2 Belongs to the flagella basal body rod proteins family K02396 - - 3.698e-214 698.0
MMS1_k127_2283978_20 - - - - 0.0000000000000000000000000000000007219 141.0
MMS1_k127_2283978_21 Transcriptional regulator, araC family - - - 0.000000000000000000000000000001589 133.0
MMS1_k127_2283978_22 Elongator protein 3, MiaB family, Radical SAM K06871,K21936 - 2.1.1.342 0.00000000000000000001656 105.0
MMS1_k127_2283978_23 Tetratricopeptide repeat - - - 0.00000000000000000002488 99.0
MMS1_k127_2283978_24 Rod binding protein - - - 0.0000000000000000004316 90.0
MMS1_k127_2283978_25 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000001378 67.0
MMS1_k127_2283978_26 PFAM Nitrogen fixation protein of - - - 0.000005261 53.0
MMS1_k127_2283978_27 Flagellar protein FlaF - - - 0.00000672 56.0
MMS1_k127_2283978_3 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 2.914e-208 671.0
MMS1_k127_2283978_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 596.0
MMS1_k127_2283978_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 468.0
MMS1_k127_2283978_6 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 450.0
MMS1_k127_2283978_7 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 439.0
MMS1_k127_2283978_8 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 403.0
MMS1_k127_2283978_9 Molecular chaperone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 346.0
MMS1_k127_2286296_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 2.938e-307 955.0
MMS1_k127_2286296_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 7.623e-231 718.0
MMS1_k127_2286296_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000052 267.0
MMS1_k127_2286296_11 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000000000000000000009071 192.0
MMS1_k127_2286296_12 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000000619 177.0
MMS1_k127_2286296_13 DinB family - - - 0.00000000000000000000000000000000000000000000004026 174.0
MMS1_k127_2286296_14 DUF218 domain - - - 0.000000000000000000000000000000000000000000004888 174.0
MMS1_k127_2286296_15 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000103 169.0
MMS1_k127_2286296_16 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000001873 119.0
MMS1_k127_2286296_17 - - - - 0.00000000000000000000001955 111.0
MMS1_k127_2286296_18 invasion associated locus B - - - 0.0000000000001601 78.0
MMS1_k127_2286296_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 3.281e-202 633.0
MMS1_k127_2286296_20 - - - - 0.0002841 48.0
MMS1_k127_2286296_3 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 4.604e-201 629.0
MMS1_k127_2286296_4 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 531.0
MMS1_k127_2286296_5 Protein of unknown function (DUF3095) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 454.0
MMS1_k127_2286296_6 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 325.0
MMS1_k127_2286296_7 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 292.0
MMS1_k127_2286296_8 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001002 290.0
MMS1_k127_2286296_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001017 261.0
MMS1_k127_2286313_0 HD domain - - - 0.0 1325.0
MMS1_k127_2286313_1 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 3.568e-319 987.0
MMS1_k127_2286313_10 YdjC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 326.0
MMS1_k127_2286313_11 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007955 288.0
MMS1_k127_2286313_12 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000000009631 201.0
MMS1_k127_2286313_13 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.00000000000000000000000000000000000000000000000004554 182.0
MMS1_k127_2286313_14 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000004101 167.0
MMS1_k127_2286313_15 PFAM Glutathione S-transferase, N-terminal domain K11209 - - 0.0000000000000000000000000000000000000001918 161.0
MMS1_k127_2286313_16 Phosphorylase superfamily K01243 - 3.2.2.9 0.0000000000000000000000000000000000007781 154.0
MMS1_k127_2286313_17 Dienelactone hydrolase - - - 0.0000000000000000000000000000000000009269 150.0
MMS1_k127_2286313_18 Transposase K01152 - - 0.00000000000000000005263 95.0
MMS1_k127_2286313_2 MMPL family K07003 - - 4.114e-235 755.0
MMS1_k127_2286313_3 Radical SAM - - - 4.246e-215 682.0
MMS1_k127_2286313_4 Domain of unknown function (DUF3463) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 563.0
MMS1_k127_2286313_5 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 519.0
MMS1_k127_2286313_6 Transposase and inactivated K07494 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 351.0
MMS1_k127_2286313_7 Major facilitator Superfamily K03446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 319.0
MMS1_k127_2286313_8 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 319.0
MMS1_k127_2286313_9 Phytoene synthase K21678 - 2.5.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 312.0
MMS1_k127_2286511_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01531,K01535 - 3.6.3.2,3.6.3.6 1.784e-213 687.0
MMS1_k127_2286511_1 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009848 451.0
MMS1_k127_2286511_2 Voltage gated chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 438.0
MMS1_k127_2286511_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 302.0
MMS1_k127_2286511_4 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001102 267.0
MMS1_k127_2286511_5 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000353 88.0
MMS1_k127_2286511_6 Tetratricopeptide repeat - - - 0.0002636 51.0
MMS1_k127_2295532_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 8.302e-254 792.0
MMS1_k127_2295532_1 Pyridoxal-dependent decarboxylase conserved domain K01580 - 4.1.1.15 1.469e-223 701.0
MMS1_k127_2295532_10 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000003868 133.0
MMS1_k127_2295532_11 TnsA endonuclease N terminal - - - 0.00000000000000000000000000000001668 135.0
MMS1_k127_2295532_12 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000002212 130.0
MMS1_k127_2295532_13 Transposase - - - 0.00000000000000000000000126 103.0
MMS1_k127_2295532_14 Protein required for attachment to host cells - - - 0.000000000000000000002857 101.0
MMS1_k127_2295532_15 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000000003015 93.0
MMS1_k127_2295532_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 593.0
MMS1_k127_2295532_3 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 394.0
MMS1_k127_2295532_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 348.0
MMS1_k127_2295532_5 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000008474 223.0
MMS1_k127_2295532_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000002692 204.0
MMS1_k127_2295532_7 DoxX K15977 - - 0.0000000000000000000000000000000000000000000000000000002096 199.0
MMS1_k127_2295532_8 Protein of unknown function (DUF1109) - - - 0.00000000000000000000000000000000000000000000000002661 186.0
MMS1_k127_2295532_9 TniQ - - - 0.00000000000000000000000000000000003474 151.0
MMS1_k127_2304344_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1076.0
MMS1_k127_2304344_1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 1.609e-280 874.0
MMS1_k127_2304344_2 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 8.06e-220 691.0
MMS1_k127_2304344_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 431.0
MMS1_k127_2304344_4 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 406.0
MMS1_k127_2304344_5 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 329.0
MMS1_k127_2304344_6 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 289.0
MMS1_k127_2304344_7 SURF4 family K15977 - - 0.000000000000000000000000000000000000000000000000000000006435 201.0
MMS1_k127_2304344_8 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000002614 100.0
MMS1_k127_2311406_0 COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases K02230 - 6.6.1.2 0.0 1481.0
MMS1_k127_2311406_1 Threonine synthase K01733 - 4.2.3.1 5.788e-222 697.0
MMS1_k127_2311406_10 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000009236 211.0
MMS1_k127_2311406_11 COG0861 Membrane protein TerC, possibly involved in tellurium resistance - - - 0.000000000000000000000000000000000000000000000000000000000001507 222.0
MMS1_k127_2311406_12 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000001244 178.0
MMS1_k127_2311406_14 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000001052 141.0
MMS1_k127_2311406_15 Protein of unknown function (DUF2934) - - - 0.000000000503 66.0
MMS1_k127_2311406_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.702e-204 644.0
MMS1_k127_2311406_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.963e-197 632.0
MMS1_k127_2311406_4 Belongs to the peptidase M16 family - - - 6.862e-194 634.0
MMS1_k127_2311406_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 474.0
MMS1_k127_2311406_6 Cobalamin synthesis protein cobW C-terminal domain K02234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 467.0
MMS1_k127_2311406_7 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 297.0
MMS1_k127_2311406_8 transcriptional regulator K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 285.0
MMS1_k127_2311406_9 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000000000000000002541 242.0
MMS1_k127_2314370_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1507.0
MMS1_k127_2314370_1 ATP-dependent helicase K03579 - 3.6.4.13 0.0 1039.0
MMS1_k127_2314370_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.801e-295 923.0
MMS1_k127_2314370_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.272e-265 827.0
MMS1_k127_2314370_4 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 533.0
MMS1_k127_2314370_5 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 449.0
MMS1_k127_2314370_6 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 420.0
MMS1_k127_2314370_7 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 364.0
MMS1_k127_2314370_8 Cytochrome c2 K08738 - - 0.00000000000000000000000005767 111.0
MMS1_k127_2330253_0 PAS PAC domain-containing protein - - - 1.315e-296 930.0
MMS1_k127_2330253_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.332e-262 824.0
MMS1_k127_2330253_10 regulator K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 327.0
MMS1_k127_2330253_11 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 320.0
MMS1_k127_2330253_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 299.0
MMS1_k127_2330253_13 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000053 286.0
MMS1_k127_2330253_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009952 278.0
MMS1_k127_2330253_15 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000001017 166.0
MMS1_k127_2330253_16 Protein of unknown function (FYDLN_acid) - - - 0.00000000000000000000000000000000358 134.0
MMS1_k127_2330253_17 Peptidase propeptide and YPEB domain - - - 0.0000000000008216 73.0
MMS1_k127_2330253_2 Tetratricopeptide repeat - - - 1.432e-225 721.0
MMS1_k127_2330253_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 563.0
MMS1_k127_2330253_4 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 533.0
MMS1_k127_2330253_5 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 437.0
MMS1_k127_2330253_6 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 415.0
MMS1_k127_2330253_7 Histidine kinase K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 399.0
MMS1_k127_2330253_8 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 381.0
MMS1_k127_2330253_9 Repeat of Unknown Function (DUF347) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 370.0
MMS1_k127_23399_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0 1156.0
MMS1_k127_23399_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 2.638e-202 639.0
MMS1_k127_23399_10 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 317.0
MMS1_k127_23399_11 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001909 285.0
MMS1_k127_23399_12 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000001349 266.0
MMS1_k127_23399_13 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001665 277.0
MMS1_k127_23399_14 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000002522 237.0
MMS1_k127_23399_15 transcriptional regulator K18301 - - 0.00000000000000000000000000000000000000000000000000000000000003686 220.0
MMS1_k127_23399_16 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000000239 174.0
MMS1_k127_23399_17 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000006569 156.0
MMS1_k127_23399_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 557.0
MMS1_k127_23399_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 528.0
MMS1_k127_23399_4 (LPS) heptosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 448.0
MMS1_k127_23399_5 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009057 437.0
MMS1_k127_23399_6 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 391.0
MMS1_k127_23399_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 370.0
MMS1_k127_23399_8 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 366.0
MMS1_k127_23399_9 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 357.0
MMS1_k127_2342856_0 FAD binding domain K00394 - 1.8.99.2 2.919e-305 946.0
MMS1_k127_2342856_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.378e-216 680.0
MMS1_k127_2342856_10 PFAM CYTH domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000159 162.0
MMS1_k127_2342856_11 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000002662 137.0
MMS1_k127_2342856_12 MazG-like family - - - 0.00000000000000000000000000000217 129.0
MMS1_k127_2342856_13 PUA-like domain K00958 - 2.7.7.4 0.000002436 52.0
MMS1_k127_2342856_2 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 488.0
MMS1_k127_2342856_3 cobalamin synthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 450.0
MMS1_k127_2342856_4 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 311.0
MMS1_k127_2342856_5 Phosphate-selective porin O and P K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001021 269.0
MMS1_k127_2342856_6 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000008653 239.0
MMS1_k127_2342856_7 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000000000000000000000000002627 219.0
MMS1_k127_2342856_8 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000005925 215.0
MMS1_k127_2342856_9 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000004682 212.0
MMS1_k127_2358889_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 586.0
MMS1_k127_2358889_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 464.0
MMS1_k127_2358889_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 467.0
MMS1_k127_2358889_3 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 445.0
MMS1_k127_2358889_4 PFAM Ribulose bisphosphate carboxylase large chain K01601 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008831 399.0
MMS1_k127_2358889_5 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 400.0
MMS1_k127_2358889_6 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 347.0
MMS1_k127_2358889_7 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.00000000000000000000000000000000000000000000000000000000000000000000000000009162 274.0
MMS1_k127_2358889_8 MlaA lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000003143 233.0
MMS1_k127_2358889_9 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000006214 214.0
MMS1_k127_2359355_0 Precorrin-3B K05934,K13541 - 2.1.1.131,3.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 536.0
MMS1_k127_2359355_1 Precorrin-4 K05936 - 2.1.1.133,2.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 394.0
MMS1_k127_2411196_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2494.0
MMS1_k127_2411196_1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 - 1.4.1.13,1.4.1.14 4.946e-250 779.0
MMS1_k127_2411196_10 protein conserved in bacteria - - - 0.000000000000000000000000001045 114.0
MMS1_k127_2411196_2 Diguanylate cyclase - - - 3.593e-216 685.0
MMS1_k127_2411196_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 531.0
MMS1_k127_2411196_4 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 541.0
MMS1_k127_2411196_5 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 474.0
MMS1_k127_2411196_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 410.0
MMS1_k127_2411196_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 375.0
MMS1_k127_2411196_8 phosphate transport system permease K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 361.0
MMS1_k127_2411196_9 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 310.0
MMS1_k127_2413334_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1221.0
MMS1_k127_2413334_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1191.0
MMS1_k127_2413334_10 Belongs to the WrbA family - - - 0.00000000001205 67.0
MMS1_k127_2413334_2 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 1.023e-259 806.0
MMS1_k127_2413334_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 411.0
MMS1_k127_2413334_4 Belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 388.0
MMS1_k127_2413334_5 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000003624 259.0
MMS1_k127_2413334_6 Belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002706 240.0
MMS1_k127_2413334_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000001225 187.0
MMS1_k127_2413334_8 belongs to the wrba family - - - 0.000000000000000000000000000000000000000000000000001878 197.0
MMS1_k127_2413334_9 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000000000005672 152.0
MMS1_k127_2415696_0 Major facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 475.0
MMS1_k127_2415696_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 348.0
MMS1_k127_2415696_2 YHYH protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 329.0
MMS1_k127_2415696_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03406 - - 0.0000000000000000000000000000000000000000000000000000000004922 208.0
MMS1_k127_2415696_4 protein acetylation K02348,K11991,K14155 - 3.5.4.33,4.4.1.8 0.0000000000000000000000000000000000000000009 164.0
MMS1_k127_2415696_5 transposition K07497 - - 0.000000000003702 66.0
MMS1_k127_2415696_6 Putative peptidoglycan binding domain - - - 0.0001531 49.0
MMS1_k127_2426705_0 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 525.0
MMS1_k127_2426705_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 467.0
MMS1_k127_2426705_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 304.0
MMS1_k127_2426705_3 Extracellular solute-binding protein family 3 K07679 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001766 314.0
MMS1_k127_2426705_4 transmembrane signaling receptor activity - - - 0.00000000000000000000000000000000000000000000000006325 198.0
MMS1_k127_2426705_5 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000001164 178.0
MMS1_k127_2426705_6 Thioredoxin - - - 0.000000000000000000000000000000000000000000006098 171.0
MMS1_k127_2426705_7 Redoxin - - - 0.00000000000000000000000000000000004225 139.0
MMS1_k127_2426705_8 STAS domain - - - 0.000000000001491 72.0
MMS1_k127_2459113_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 585.0
MMS1_k127_2459113_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000004578 223.0
MMS1_k127_2459113_2 - - - - 0.00000000000000000000000000000000000007616 149.0
MMS1_k127_2459113_3 - - - - 0.00000000000000000002979 94.0
MMS1_k127_2459113_4 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000001791 81.0
MMS1_k127_2459113_5 Recombinase zinc beta ribbon domain - - - 0.000000001106 64.0
MMS1_k127_2460844_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 6.729e-201 631.0
MMS1_k127_2460844_1 Belongs to the flagella basal body rod proteins family K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 400.0
MMS1_k127_2460844_2 Belongs to the flagella basal body rod proteins family K02391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 320.0
MMS1_k127_2460844_3 Flagellar basal body P-ring biosynthesis protein K02386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000838 283.0
MMS1_k127_2460844_4 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001051 273.0
MMS1_k127_2460844_5 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000000000000000000000000000000000000001174 220.0
MMS1_k127_2460844_6 - - - - 0.0000002247 53.0
MMS1_k127_248583_0 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 599.0
MMS1_k127_248583_1 COG0826 Collagenase and related proteases K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 507.0
MMS1_k127_248583_2 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 486.0
MMS1_k127_248583_3 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 400.0
MMS1_k127_248583_4 Peptidase family U32 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 403.0
MMS1_k127_248583_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 376.0
MMS1_k127_248583_6 lipid carrier protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004324 233.0
MMS1_k127_248583_7 Haem-degrading - - - 0.000000000000000000000000000000000003457 145.0
MMS1_k127_248583_8 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0001666 55.0
MMS1_k127_2530505_0 Heat shock 70 kDa protein K04043 - - 0.0 1091.0
MMS1_k127_2530505_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.426e-232 724.0
MMS1_k127_2530505_10 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 378.0
MMS1_k127_2530505_11 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 380.0
MMS1_k127_2530505_12 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 368.0
MMS1_k127_2530505_13 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 334.0
MMS1_k127_2530505_14 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 310.0
MMS1_k127_2530505_15 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 307.0
MMS1_k127_2530505_16 ATPase with chaperone activity K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 307.0
MMS1_k127_2530505_17 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 306.0
MMS1_k127_2530505_18 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 321.0
MMS1_k127_2530505_19 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 293.0
MMS1_k127_2530505_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 586.0
MMS1_k127_2530505_20 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006906 290.0
MMS1_k127_2530505_21 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006934 250.0
MMS1_k127_2530505_22 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000001725 216.0
MMS1_k127_2530505_23 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000000000000009271 196.0
MMS1_k127_2530505_24 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.00000000000000000000000000000000003417 149.0
MMS1_k127_2530505_25 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000124 136.0
MMS1_k127_2530505_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 544.0
MMS1_k127_2530505_4 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 498.0
MMS1_k127_2530505_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 494.0
MMS1_k127_2530505_6 ATPase with chaperone activity K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 470.0
MMS1_k127_2530505_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 449.0
MMS1_k127_2530505_8 PFAM ABC transporter K02471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 449.0
MMS1_k127_2530505_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 398.0
MMS1_k127_2536445_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 591.0
MMS1_k127_2536445_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 535.0
MMS1_k127_2536445_10 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000000000000000000000000000003651 166.0
MMS1_k127_2536445_11 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000002343 171.0
MMS1_k127_2536445_12 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000003242 162.0
MMS1_k127_2536445_13 Hydrogenase maturation protease - - - 0.000000000000000000000000000000000000004859 152.0
MMS1_k127_2536445_14 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000003396 132.0
MMS1_k127_2536445_15 Protein of unknown function (DUF465) - - - 0.00000000000000000008285 93.0
MMS1_k127_2536445_16 Pilus formation protein N terminal region - - - 0.000000000000001175 83.0
MMS1_k127_2536445_17 small protein - - - 0.000000000002485 68.0
MMS1_k127_2536445_18 TadE-like protein - - - 0.000000002129 64.0
MMS1_k127_2536445_19 TadE-like protein - - - 0.00000004023 61.0
MMS1_k127_2536445_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 454.0
MMS1_k127_2536445_20 transcriptional - - - 0.0000001124 53.0
MMS1_k127_2536445_3 Double sensory domain of two-component sensor kinase K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 398.0
MMS1_k127_2536445_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000008887 265.0
MMS1_k127_2536445_5 peptidyl-lysine hydroxylation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004078 263.0
MMS1_k127_2536445_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000003055 245.0
MMS1_k127_2536445_7 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004008 246.0
MMS1_k127_2536445_8 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000002584 234.0
MMS1_k127_2536445_9 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000002121 226.0
MMS1_k127_2543459_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.78e-261 826.0
MMS1_k127_2543459_1 Glutathione S-transferase, C-terminal domain K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 514.0
MMS1_k127_2543459_2 COG0530 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 461.0
MMS1_k127_2543459_3 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 435.0
MMS1_k127_2543459_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.0000000000000000974 79.0
MMS1_k127_2570039_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.917e-270 837.0
MMS1_k127_2570039_1 Cell division protein FtsI penicillin-binding protein 2 K05515 - 3.4.16.4 6.643e-266 831.0
MMS1_k127_2570039_2 Rod shape-determining protein MreB K03569 - - 3.176e-214 668.0
MMS1_k127_2570039_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 591.0
MMS1_k127_2570039_4 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 364.0
MMS1_k127_2570039_5 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 361.0
MMS1_k127_2570039_6 shape-determining protein K03571 - - 0.00000000000000000000000000000000000000000000000000000000003248 223.0
MMS1_k127_2570039_7 - - - - 0.00000768 53.0
MMS1_k127_2615385_0 Respiratory nitrate reductase beta C-terminal - - - 1.324e-304 940.0
MMS1_k127_2615385_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.826e-273 849.0
MMS1_k127_2615385_10 Nitrate reductase delta subunit K00373 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004219 280.0
MMS1_k127_2615385_11 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000002456 232.0
MMS1_k127_2615385_12 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.000000000000000000000000000000006729 127.0
MMS1_k127_2615385_13 - - - - 0.000000000000000000000000000002346 136.0
MMS1_k127_2615385_15 Protein of unknown function (DUF736) - - - 0.0001854 49.0
MMS1_k127_2615385_2 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 464.0
MMS1_k127_2615385_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 440.0
MMS1_k127_2615385_4 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009321 380.0
MMS1_k127_2615385_5 Lytic murein transglycosylase K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 361.0
MMS1_k127_2615385_6 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 347.0
MMS1_k127_2615385_7 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 336.0
MMS1_k127_2615385_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 293.0
MMS1_k127_2615385_9 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 289.0
MMS1_k127_2622527_0 Pyridine nucleotide-disulphide oxidoreductase - - - 9.606e-238 749.0
MMS1_k127_2622527_1 Nucleotidyl transferase K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 603.0
MMS1_k127_2622527_10 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007586 279.0
MMS1_k127_2622527_11 PFAM DsrE DsrF-like family K09004 - - 0.0000000000000000000000000000000000000000000000000000000000006542 214.0
MMS1_k127_2622527_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000007115 218.0
MMS1_k127_2622527_13 PFAM Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000001098 226.0
MMS1_k127_2622527_14 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.000000000000000000000000000000000000000000000000000000000002963 213.0
MMS1_k127_2622527_15 - - - - 0.00000000000000000000000000000000000000000000000000000000001122 214.0
MMS1_k127_2622527_16 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000003837 180.0
MMS1_k127_2622527_17 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000193 104.0
MMS1_k127_2622527_18 - - - - 0.0000000000001761 74.0
MMS1_k127_2622527_2 belongs to the complex I 49 kDa subunit family K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 560.0
MMS1_k127_2622527_3 Proton-conducting membrane transporter K00342,K05561,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 539.0
MMS1_k127_2622527_4 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 403.0
MMS1_k127_2622527_5 pfam nadh K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 402.0
MMS1_k127_2622527_6 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 361.0
MMS1_k127_2622527_7 COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase K02225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 359.0
MMS1_k127_2622527_8 PFAM NADH Ubiquinone K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 309.0
MMS1_k127_2622527_9 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 313.0
MMS1_k127_2625653_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1424.0
MMS1_k127_2625653_1 Radical SAM superfamily K06871 - - 2.258e-204 645.0
MMS1_k127_2625653_10 response regulator - - - 0.000000000000000000000000000000000000007006 148.0
MMS1_k127_2625653_11 Belongs to the sulfur carrier protein TusA family K07112 - - 0.0000000000000002012 87.0
MMS1_k127_2625653_13 Sulphur transport K07112 - - 0.0000000003748 71.0
MMS1_k127_2625653_15 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000008087 61.0
MMS1_k127_2625653_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 436.0
MMS1_k127_2625653_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 422.0
MMS1_k127_2625653_4 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 396.0
MMS1_k127_2625653_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000003384 252.0
MMS1_k127_2625653_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001564 248.0
MMS1_k127_2625653_7 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000003406 241.0
MMS1_k127_2625653_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000002831 230.0
MMS1_k127_2625653_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000007163 231.0
MMS1_k127_2643959_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1258.0
MMS1_k127_2643959_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1038.0
MMS1_k127_2643959_10 - - - - 0.000000003347 62.0
MMS1_k127_2643959_11 - - - - 0.0000288 53.0
MMS1_k127_2643959_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 1.042e-228 715.0
MMS1_k127_2643959_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 567.0
MMS1_k127_2643959_4 Histidine kinase-like ATPases K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 550.0
MMS1_k127_2643959_5 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 470.0
MMS1_k127_2643959_6 Transcriptional regulatory protein, C terminal K14981 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 338.0
MMS1_k127_2643959_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000006636 226.0
MMS1_k127_2643959_8 PFAM HPP family K07168 - - 0.0000000000000000000000000000000000000000000000000000000000004767 226.0
MMS1_k127_2643959_9 PFAM CBS domain - - - 0.00000000000000000000000004777 115.0
MMS1_k127_2651914_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1124.0
MMS1_k127_2651914_1 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 577.0
MMS1_k127_2651914_2 COG2199 FOG GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 518.0
MMS1_k127_2651914_3 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001524 241.0
MMS1_k127_2651914_4 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000000000000000000000008674 222.0
MMS1_k127_2651914_5 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000000000000005376 160.0
MMS1_k127_2657149_0 malonyl CoA-acyl carrier protein transacylase K00645,K15327 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 427.0
MMS1_k127_2657149_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 365.0
MMS1_k127_2657149_2 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001178 250.0
MMS1_k127_2657149_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000000002512 197.0
MMS1_k127_2657149_4 membrane - - - 0.000000000000000000000000000000000000000000000000000004526 202.0
MMS1_k127_2657149_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000000000001279 148.0
MMS1_k127_2657149_6 Phosphopantetheine attachment site K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000009892 141.0
MMS1_k127_2673946_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 1.104e-195 615.0
MMS1_k127_2673946_1 COG0768 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 611.0
MMS1_k127_2673946_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 562.0
MMS1_k127_2673946_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 541.0
MMS1_k127_2673946_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002921 276.0
MMS1_k127_2673946_5 periplasmic protein - - - 0.000000000000000000000006853 111.0
MMS1_k127_2682125_0 DNA polymerase K02337 - 2.7.7.7 0.0 1873.0
MMS1_k127_2682125_1 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.0 1131.0
MMS1_k127_2682125_10 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 401.0
MMS1_k127_2682125_11 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 387.0
MMS1_k127_2682125_12 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 368.0
MMS1_k127_2682125_13 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 370.0
MMS1_k127_2682125_14 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 355.0
MMS1_k127_2682125_15 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 334.0
MMS1_k127_2682125_16 Riboflavin synthase alpha chain K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 307.0
MMS1_k127_2682125_17 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 285.0
MMS1_k127_2682125_18 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.0000000000000000000000000000000000000000000000000000000000000000000000006123 256.0
MMS1_k127_2682125_19 ROS/MUCR transcriptional regulator protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003295 243.0
MMS1_k127_2682125_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1074.0
MMS1_k127_2682125_20 COG0698 Ribose 5-phosphate isomerase RpiB K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000009569 235.0
MMS1_k127_2682125_21 regulation of RNA biosynthetic process K03567 - - 0.00000000000000000000000000000000000000000000000000000000000000000001027 255.0
MMS1_k127_2682125_22 Penicillin-insensitive murein endopeptidase K07261 - - 0.000000000000000000000000000000000000000000000000000000000000000001183 238.0
MMS1_k127_2682125_23 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000008449 204.0
MMS1_k127_2682125_24 Phytoene squalene synthetase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000002407 207.0
MMS1_k127_2682125_25 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000001549 186.0
MMS1_k127_2682125_26 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000000008395 151.0
MMS1_k127_2682125_27 OmpA family K03640 - - 0.0000000000000000000000000000000000000319 151.0
MMS1_k127_2682125_28 Controls the rotational direction of flagella during chemotaxis - - - 0.000000000000000000000000000000000006507 141.0
MMS1_k127_2682125_29 Protein of unknown function (DUF2892) - - - 0.00000000000000000000002028 101.0
MMS1_k127_2682125_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.079e-243 756.0
MMS1_k127_2682125_31 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000009564 56.0
MMS1_k127_2682125_4 Glycosyl transferase family 41 - - - 1.964e-237 754.0
MMS1_k127_2682125_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.23e-197 621.0
MMS1_k127_2682125_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 528.0
MMS1_k127_2682125_7 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 525.0
MMS1_k127_2682125_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 443.0
MMS1_k127_2682125_9 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 422.0
MMS1_k127_2698799_0 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 545.0
MMS1_k127_2698799_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 427.0
MMS1_k127_2698799_2 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007645 268.0
MMS1_k127_2704334_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 583.0
MMS1_k127_2704334_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 437.0
MMS1_k127_2704334_2 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 312.0
MMS1_k127_2704334_3 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001063 285.0
MMS1_k127_2704334_4 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000002048 236.0
MMS1_k127_2704334_5 protein conserved in bacteria K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000001227 220.0
MMS1_k127_2704334_6 Acid phosphatase homologues - - - 0.00000000000000000000000000000000000000000000000000000000011 227.0
MMS1_k127_2704334_7 FR47-like protein K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000003747 176.0
MMS1_k127_2704334_8 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000001687 142.0
MMS1_k127_2704334_9 membrane - - - 0.00000000000000000000006743 100.0
MMS1_k127_2706022_0 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 615.0
MMS1_k127_2706022_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 351.0
MMS1_k127_2706022_2 Glycosyltransferase family 17 K00737 - 2.4.1.144 0.00000000000000000000000000000000000000000000000000000000000000000000000001667 261.0
MMS1_k127_2706022_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03406 - - 0.00000000000000000000000000000000000000000000000000000006941 202.0
MMS1_k127_2706022_4 Nucleotidyltransferase domain - - - 0.00000000000000000000000000000000000000000000004953 172.0
MMS1_k127_2706022_5 Protein of unknown function DUF86 - - - 0.00000000000000000000003014 109.0
MMS1_k127_2706022_6 Resolvase - - - 0.000000000003325 68.0
MMS1_k127_2715834_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 6.544e-316 995.0
MMS1_k127_2715834_1 ABC-type multidrug transport system, ATPase and permease K02021,K06147,K11085 - - 1.238e-218 694.0
MMS1_k127_2715834_10 Protein conserved in bacteria K09796 - - 0.00000000000000000000002636 110.0
MMS1_k127_2715834_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 608.0
MMS1_k127_2715834_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 491.0
MMS1_k127_2715834_4 COG0147 Anthranilate para-aminobenzoate synthases component I K01665,K13950 - 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 462.0
MMS1_k127_2715834_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 425.0
MMS1_k127_2715834_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 434.0
MMS1_k127_2715834_7 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007247 247.0
MMS1_k127_2715834_8 Aminotransferase K00826,K02619 - 2.6.1.42,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000003019 254.0
MMS1_k127_2715834_9 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000001184 234.0
MMS1_k127_2718518_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 533.0
MMS1_k127_2718518_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406,K05874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 365.0
MMS1_k127_2718518_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 339.0
MMS1_k127_2718518_3 COG0835 Chemotaxis signal transduction protein K03408 - - 0.0000000000000000000000000000000000000000000000000747 183.0
MMS1_k127_2718518_4 Protein of unknown function (DUF2478) - - - 0.0000000000000000000006957 102.0
MMS1_k127_2719425_0 Nadh flavin oxidoreductase nadh oxidase K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 515.0
MMS1_k127_2719425_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007438 241.0
MMS1_k127_2719425_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000002835 237.0
MMS1_k127_2719425_3 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000001819 192.0
MMS1_k127_2719425_4 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000004288 124.0
MMS1_k127_2731975_0 malic enzyme K00029 - 1.1.1.40 0.0 1204.0
MMS1_k127_2731975_1 GTP-binding protein TypA K06207 - - 0.0 1078.0
MMS1_k127_2731975_10 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 291.0
MMS1_k127_2731975_11 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000000000000002516 219.0
MMS1_k127_2731975_12 - - - - 0.0000000000000000000000000000000000000000000000000000214 192.0
MMS1_k127_2731975_13 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000005728 147.0
MMS1_k127_2731975_14 - - - - 0.000000000000000000004234 99.0
MMS1_k127_2731975_15 Heat shock 70 kDa protein K04043 - - 0.0000000005569 61.0
MMS1_k127_2731975_2 This protein is involved in the repair of mismatches in DNA K03555 - - 2.739e-272 852.0
MMS1_k127_2731975_3 COG0477 Permeases of the major facilitator superfamily K08218 - - 2.193e-194 616.0
MMS1_k127_2731975_4 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 536.0
MMS1_k127_2731975_5 signal transduction histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 494.0
MMS1_k127_2731975_6 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 469.0
MMS1_k127_2731975_7 Domain of unknown function (DUF1848) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 383.0
MMS1_k127_2731975_8 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 337.0
MMS1_k127_2731975_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 327.0
MMS1_k127_2747116_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 3.684e-214 685.0
MMS1_k127_2747116_1 COG0642 Signal transduction histidine kinase K14980 - 2.7.13.3 5.672e-208 662.0
MMS1_k127_2747116_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009198 262.0
MMS1_k127_2747116_11 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003663 248.0
MMS1_k127_2747116_12 oxidoreductase 20 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000006075 203.0
MMS1_k127_2747116_13 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000000000000008832 166.0
MMS1_k127_2747116_14 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000001822 131.0
MMS1_k127_2747116_15 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000001624 122.0
MMS1_k127_2747116_16 - - - - 0.00000001441 66.0
MMS1_k127_2747116_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 600.0
MMS1_k127_2747116_3 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 559.0
MMS1_k127_2747116_4 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 480.0
MMS1_k127_2747116_5 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 449.0
MMS1_k127_2747116_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009439 432.0
MMS1_k127_2747116_7 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 416.0
MMS1_k127_2747116_8 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 386.0
MMS1_k127_2747116_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 297.0
MMS1_k127_2765900_0 cellulose synthase K00694 - 2.4.1.12 9.477e-273 859.0
MMS1_k127_2765900_1 Asparagine synthase K01953 - 6.3.5.4 8.536e-262 818.0
MMS1_k127_2765900_10 Pilus formation protein N terminal region K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 402.0
MMS1_k127_2765900_11 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 379.0
MMS1_k127_2765900_12 Glycosyl hydrolases family 8 K20542 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 377.0
MMS1_k127_2765900_13 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 358.0
MMS1_k127_2765900_14 Cellulose synthase operon protein C C-terminus (BCSC_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 354.0
MMS1_k127_2765900_15 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 338.0
MMS1_k127_2765900_16 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 324.0
MMS1_k127_2765900_17 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 321.0
MMS1_k127_2765900_18 protein acetylation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002539 266.0
MMS1_k127_2765900_19 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000001456 243.0
MMS1_k127_2765900_2 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.495e-254 792.0
MMS1_k127_2765900_20 Putative AphA-like transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000002173 234.0
MMS1_k127_2765900_21 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000002135 228.0
MMS1_k127_2765900_22 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
MMS1_k127_2765900_23 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000002636 223.0
MMS1_k127_2765900_24 COQ9 K18587 - - 0.0000000000000000000000000000000000000000000000000000000000003624 219.0
MMS1_k127_2765900_25 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000000000000000000000000000000000000000005491 218.0
MMS1_k127_2765900_26 bond formation protein, DsbB - - - 0.00000000000000000000000000000000000000000000005506 175.0
MMS1_k127_2765900_27 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000001219 169.0
MMS1_k127_2765900_28 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000002199 162.0
MMS1_k127_2765900_29 Pilus biogenesis CpaD protein (pilus_cpaD) K02281 - - 0.0000000000000000000000000000000000000004568 156.0
MMS1_k127_2765900_3 Type II/IV secretion system protein K02283,K20527 - - 2.839e-242 758.0
MMS1_k127_2765900_30 TRANSCRIPTIONal - - - 0.00000000000000000000000000000001999 145.0
MMS1_k127_2765900_31 Type IV leader peptidase family K02278 - 3.4.23.43 0.0000000000000000000000000000008117 130.0
MMS1_k127_2765900_32 transcriptional - - - 0.0000000000000000000000000001649 121.0
MMS1_k127_2765900_33 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000001156 115.0
MMS1_k127_2765900_34 - - - - 0.000000000000000000000002876 111.0
MMS1_k127_2765900_35 Ribbon-helix-helix domain - - - 0.00000000000000000000009977 108.0
MMS1_k127_2765900_36 SlyX K03745 - - 0.0000000000000000009377 89.0
MMS1_k127_2765900_37 Protein of unknown function (DUF1698) - - - 0.000000000000009292 86.0
MMS1_k127_2765900_38 Predicted permease K07089 - - 0.00000000000009381 78.0
MMS1_k127_2765900_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.683e-236 736.0
MMS1_k127_2765900_5 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 1.221e-221 694.0
MMS1_k127_2765900_6 Bacterial cellulose synthase subunit K20541 - - 2.444e-202 657.0
MMS1_k127_2765900_7 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 528.0
MMS1_k127_2765900_8 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 430.0
MMS1_k127_2765900_9 Pilus assembly protein K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 397.0
MMS1_k127_2775061_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.264e-298 931.0
MMS1_k127_2775061_1 Zn-dependent proteases and their inactivated homologs K03592 - - 9.629e-213 669.0
MMS1_k127_2775061_10 - - - - 0.000002662 59.0
MMS1_k127_2775061_2 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 439.0
MMS1_k127_2775061_3 protein conserved in bacteria K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 332.0
MMS1_k127_2775061_4 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 294.0
MMS1_k127_2775061_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008053 255.0
MMS1_k127_2775061_6 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000000000000000101 165.0
MMS1_k127_2775061_7 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000000000000000000002246 147.0
MMS1_k127_2775061_8 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000008577 139.0
MMS1_k127_2775061_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000003204 97.0
MMS1_k127_2781353_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 593.0
MMS1_k127_2781353_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 424.0
MMS1_k127_2781353_2 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 378.0
MMS1_k127_2781353_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000001128 227.0
MMS1_k127_2781353_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000003706 194.0
MMS1_k127_2781353_5 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000000000000000001267 162.0
MMS1_k127_2781353_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000005233 130.0
MMS1_k127_2781353_7 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000001012 80.0
MMS1_k127_2801954_0 COG2202 FOG PAS PAC domain - - - 3.964e-309 970.0
MMS1_k127_2801954_1 FAD linked oxidase domain protein K00104,K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.3.15 1.264e-239 751.0
MMS1_k127_2801954_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 368.0
MMS1_k127_2801954_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001615 255.0
MMS1_k127_2801954_4 Protein of unknown function (DUF445) - - - 0.000000000000000000000000000000000000000000000003643 183.0
MMS1_k127_2801954_5 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000001124 164.0
MMS1_k127_2801954_6 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.000000000000000000000000000000002732 138.0
MMS1_k127_2801968_0 Thiol disulfide interchange protein K04084,K08344 - 1.8.1.8 2.389e-224 717.0
MMS1_k127_2801968_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.643e-220 694.0
MMS1_k127_2801968_10 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000001857 190.0
MMS1_k127_2801968_11 alpha beta - - - 0.000000000000000000000000000002363 123.0
MMS1_k127_2801968_12 Protein of unknown function (DUF2501) - - - 0.000000000000000002779 90.0
MMS1_k127_2801968_2 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 511.0
MMS1_k127_2801968_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 452.0
MMS1_k127_2801968_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 361.0
MMS1_k127_2801968_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001322 279.0
MMS1_k127_2801968_6 CbiX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004234 263.0
MMS1_k127_2801968_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000002079 243.0
MMS1_k127_2801968_8 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000002224 250.0
MMS1_k127_2801968_9 Linear amide C-N hydrolases, choloylglycine hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000005707 217.0
MMS1_k127_2806047_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.476e-270 844.0
MMS1_k127_2806047_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 9.193e-241 755.0
MMS1_k127_2806047_10 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 296.0
MMS1_k127_2806047_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000000000000000001303 227.0
MMS1_k127_2806047_12 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000000004353 165.0
MMS1_k127_2806047_13 SpoIIAA-like - - - 0.00000000000000000000000000000000000000000000965 165.0
MMS1_k127_2806047_14 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000006345 147.0
MMS1_k127_2806047_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000000003824 130.0
MMS1_k127_2806047_16 Protein of unknown function (DUF3018) - - - 0.0000000000000000000000001112 110.0
MMS1_k127_2806047_17 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000009066 75.0
MMS1_k127_2806047_18 - - - - 0.0000000000001221 78.0
MMS1_k127_2806047_19 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000003018 65.0
MMS1_k127_2806047_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.426e-241 758.0
MMS1_k127_2806047_3 Protein of unknown function (DUF1800) - - - 1.777e-208 664.0
MMS1_k127_2806047_4 RQC K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 614.0
MMS1_k127_2806047_5 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 557.0
MMS1_k127_2806047_6 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 518.0
MMS1_k127_2806047_7 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 490.0
MMS1_k127_2806047_8 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 379.0
MMS1_k127_2806047_9 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 370.0
MMS1_k127_2808238_0 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 472.0
MMS1_k127_2808238_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 429.0
MMS1_k127_2808238_2 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 361.0
MMS1_k127_2808238_3 TOBE domain K02019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 337.0
MMS1_k127_2808238_4 COG0725 ABC-type molybdate transport system, periplasmic component K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002815 273.0
MMS1_k127_2808238_5 amino acid K20265 - - 0.00000000000000000000000000000000000000000000000000000009268 200.0
MMS1_k127_2824696_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 544.0
MMS1_k127_2824696_1 COG3959 Transketolase, N-terminal subunit K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 407.0
MMS1_k127_2824696_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 396.0
MMS1_k127_2824696_3 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 387.0
MMS1_k127_2824696_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 323.0
MMS1_k127_2824696_5 Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004809 288.0
MMS1_k127_2824696_6 phosphoglycolate phosphatase activity - - - 0.000000000000000000000000000000000000000000000001134 181.0
MMS1_k127_282713_0 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 2.008e-318 996.0
MMS1_k127_282713_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.167e-283 878.0
MMS1_k127_282713_10 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 306.0
MMS1_k127_282713_11 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 290.0
MMS1_k127_282713_12 methyl-accepting chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001845 303.0
MMS1_k127_282713_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000007114 261.0
MMS1_k127_282713_14 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006565 254.0
MMS1_k127_282713_15 ROS/MUCR transcriptional regulator protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001769 243.0
MMS1_k127_282713_16 Protein of unknown function (DUF3035) - - - 0.000000000000000000000000000000000000000000000000000000000008197 213.0
MMS1_k127_282713_17 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000000000000000000000000000002176 205.0
MMS1_k127_282713_18 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000007301 214.0
MMS1_k127_282713_19 EVE domain - - - 0.00000000000000000000000000000000000000000000000000001954 196.0
MMS1_k127_282713_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 515.0
MMS1_k127_282713_20 NfeD-like C-terminal, partner-binding K07340 - - 0.0000000000000000000000000000000000000004673 157.0
MMS1_k127_282713_21 Protein conserved in bacteria K09780 - - 0.000000000000000000000000008912 113.0
MMS1_k127_282713_22 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000406 109.0
MMS1_k127_282713_23 - - - - 0.00000000000000000005928 96.0
MMS1_k127_282713_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 490.0
MMS1_k127_282713_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 442.0
MMS1_k127_282713_5 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 424.0
MMS1_k127_282713_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 409.0
MMS1_k127_282713_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 396.0
MMS1_k127_282713_9 regulatory protein LysR K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 391.0
MMS1_k127_2842224_0 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009632 400.0
MMS1_k127_2842224_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 372.0
MMS1_k127_2842224_10 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00000000000000000000001375 108.0
MMS1_k127_2842224_11 Required for chromosome condensation and partitioning K03529 - - 0.0000000007188 60.0
MMS1_k127_2842224_2 Transcriptional regulator, AbiEi antitoxin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 329.0
MMS1_k127_2842224_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000007096 177.0
MMS1_k127_2842224_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000001811 170.0
MMS1_k127_2842224_5 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000001194 154.0
MMS1_k127_2842224_6 cell redox homeostasis K02199 - - 0.0000000000000000000000000000000000000001126 157.0
MMS1_k127_2842224_8 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000002366 139.0
MMS1_k127_2842224_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000001347 127.0
MMS1_k127_2842447_0 oxidase, subunit K00425 - 1.10.3.14 9.957e-254 791.0
MMS1_k127_2842447_1 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 612.0
MMS1_k127_2842447_10 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 357.0
MMS1_k127_2842447_11 AraC family K07506 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 306.0
MMS1_k127_2842447_12 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003119 275.0
MMS1_k127_2842447_13 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002579 224.0
MMS1_k127_2842447_14 GGDEF domain - - - 0.0000000000000000000000000001005 120.0
MMS1_k127_2842447_15 - - - - 0.00000000000000000001258 99.0
MMS1_k127_2842447_16 Histidine kinase - - - 0.00000000008112 68.0
MMS1_k127_2842447_17 Membrane bound YbgT-like protein K00424 - 1.10.3.14 0.000000312 59.0
MMS1_k127_2842447_2 oxidase, subunit K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 593.0
MMS1_k127_2842447_3 ABC transporter K16013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 602.0
MMS1_k127_2842447_4 EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 555.0
MMS1_k127_2842447_5 ABC transporter K16012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 546.0
MMS1_k127_2842447_6 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 404.0
MMS1_k127_2842447_7 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 392.0
MMS1_k127_2842447_8 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 369.0
MMS1_k127_2842447_9 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 368.0
MMS1_k127_2842600_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K12955 - 3.6.3.6 0.0 1062.0
MMS1_k127_2842600_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 5.024e-300 930.0
MMS1_k127_2842600_10 transcriptional regulator K13643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 284.0
MMS1_k127_2842600_11 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000111 268.0
MMS1_k127_2842600_12 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000007236 233.0
MMS1_k127_2842600_13 Ferredoxin K04755 - - 0.000000000000000000000000000000000000000000000000000001364 194.0
MMS1_k127_2842600_14 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000000000026 198.0
MMS1_k127_2842600_15 cytochrome c1 K00413 - - 0.000000000000000000000000000000000000000000002608 174.0
MMS1_k127_2842600_16 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000002975 141.0
MMS1_k127_2842600_17 protein conserved in bacteria - - - 0.00000000000000000000000000000001549 126.0
MMS1_k127_2842600_18 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000001359 98.0
MMS1_k127_2842600_19 Cytochrome c - - - 0.0000000000000000001182 94.0
MMS1_k127_2842600_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.287e-236 737.0
MMS1_k127_2842600_20 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0000001568 54.0
MMS1_k127_2842600_21 membrane - - - 0.0008535 47.0
MMS1_k127_2842600_3 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 527.0
MMS1_k127_2842600_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 489.0
MMS1_k127_2842600_5 Zn-dependent protease, contains TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 465.0
MMS1_k127_2842600_6 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 437.0
MMS1_k127_2842600_7 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 373.0
MMS1_k127_2842600_8 serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 352.0
MMS1_k127_2842600_9 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 311.0
MMS1_k127_2850979_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 2.484e-256 811.0
MMS1_k127_2850979_1 Sigma-54 interaction domain K19641 - - 3.404e-204 644.0
MMS1_k127_2850979_10 HupH hydrogenase expression protein, C-terminal conserved region K03618 - - 0.00000000000000000000000000000000000000000000000000000000000003354 229.0
MMS1_k127_2850979_11 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000001632 149.0
MMS1_k127_2850979_12 [NiFe]-hydrogenase assembly, chaperone, HybE - - - 0.0000000000000000000000000000000000004123 157.0
MMS1_k127_2850979_13 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.00000000000000000000000000000000004466 141.0
MMS1_k127_2850979_14 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000000004505 91.0
MMS1_k127_2850979_15 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.0000000000000000001178 91.0
MMS1_k127_2850979_16 Hydrogenase-1 expression protein HyaE K03619 - - 0.000000000000000003466 89.0
MMS1_k127_2850979_2 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 528.0
MMS1_k127_2850979_3 Belongs to the HypD family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 538.0
MMS1_k127_2850979_4 PAS PAC sensor signal transduction histidine kinase K19661 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 488.0
MMS1_k127_2850979_5 NiFe/NiFeSe hydrogenase small subunit C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 480.0
MMS1_k127_2850979_6 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 479.0
MMS1_k127_2850979_7 Acetoacetate decarboxylase (ADC) K01574 - 4.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 432.0
MMS1_k127_2850979_8 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 403.0
MMS1_k127_2850979_9 Nickel-dependent hydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000001197 239.0
MMS1_k127_285398_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 4.538e-253 807.0
MMS1_k127_285398_1 Belongs to the ABC transporter superfamily K13896 - - 8.447e-248 775.0
MMS1_k127_285398_10 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 441.0
MMS1_k127_285398_11 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 392.0
MMS1_k127_285398_12 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 326.0
MMS1_k127_285398_13 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004505 276.0
MMS1_k127_285398_14 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000002356 242.0
MMS1_k127_285398_15 PFAM globin K06886 - - 0.00000000000000000000000000000000001905 147.0
MMS1_k127_285398_16 Protein of unknown function (DUF1285) K09986 - - 0.00000000000000000000000000001656 126.0
MMS1_k127_285398_17 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0008175 45.0
MMS1_k127_285398_2 Aerotolerance regulator N-terminal - - - 5.046e-241 777.0
MMS1_k127_285398_3 membrane - - - 1.164e-197 636.0
MMS1_k127_285398_4 poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 599.0
MMS1_k127_285398_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 556.0
MMS1_k127_285398_6 transport system, permease component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 548.0
MMS1_k127_285398_7 transport system, permease component K13895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 544.0
MMS1_k127_285398_8 reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 502.0
MMS1_k127_285398_9 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 479.0
MMS1_k127_2878885_0 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 2.763e-227 711.0
MMS1_k127_2878885_1 phosphomannomutase K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 580.0
MMS1_k127_2878885_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 391.0
MMS1_k127_2878885_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 313.0
MMS1_k127_2878885_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 292.0
MMS1_k127_2878885_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003384 268.0
MMS1_k127_2878885_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005122 230.0
MMS1_k127_2878885_7 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000004529 115.0
MMS1_k127_2878885_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000005097 53.0
MMS1_k127_295232_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 4.012e-242 754.0
MMS1_k127_295232_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 529.0
MMS1_k127_295232_10 Glycosyl hydrolases family 32 N-terminal domain K01193 - 3.2.1.26 0.0000000000000000000000000000000000003757 153.0
MMS1_k127_295232_11 Peptidase S24-like - - - 0.000000000000000000000000000004239 128.0
MMS1_k127_295232_12 Protein of unknown function (DUF2478) K09138 - - 0.000000000000000001425 88.0
MMS1_k127_295232_13 PFAM regulatory protein GntR HTH - - - 0.0000000000001291 79.0
MMS1_k127_295232_2 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 507.0
MMS1_k127_295232_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 489.0
MMS1_k127_295232_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 378.0
MMS1_k127_295232_5 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 306.0
MMS1_k127_295232_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 288.0
MMS1_k127_295232_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000001363 236.0
MMS1_k127_295232_8 molybdopterin-guanine dinucleotide biosynthesis protein K03753 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000001047 209.0
MMS1_k127_295232_9 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000001003 163.0
MMS1_k127_30238_0 response regulator K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 462.0
MMS1_k127_30238_1 Sulfate transporter K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 388.0
MMS1_k127_30238_10 Phosphatidylinositol diacylglycerol-lyase K01771 - 4.6.1.13 0.000000000000000000000000000000000000006499 162.0
MMS1_k127_30238_11 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000007067 137.0
MMS1_k127_30238_2 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 390.0
MMS1_k127_30238_3 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 367.0
MMS1_k127_30238_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 327.0
MMS1_k127_30238_5 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 313.0
MMS1_k127_30238_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 284.0
MMS1_k127_30238_7 Rieske [2Fe-2S] domain K15762 - - 0.0000000000000000000000000000000000000000000000000000000001203 208.0
MMS1_k127_30238_8 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000528 204.0
MMS1_k127_30238_9 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000000000000000000000006324 162.0
MMS1_k127_313486_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835 - 5.4.2.2 2.239e-275 854.0
MMS1_k127_313486_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.212e-235 733.0
MMS1_k127_313486_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.922e-222 690.0
MMS1_k127_313486_3 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 522.0
MMS1_k127_313486_4 Nitroreductase K10679 GO:0000166,GO:0003674,GO:0003824,GO:0004155,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018545,GO:0018973,GO:0018974,GO:0019326,GO:0019439,GO:0032553,GO:0036094,GO:0042537,GO:0042802,GO:0043167,GO:0043168,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046256,GO:0046260,GO:0046263,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072490,GO:0072491,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 1.5.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 321.0
MMS1_k127_313486_5 Double sensory domain of two-component sensor kinase K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 326.0
MMS1_k127_313486_6 Membrane-associated sensor, integral membrane domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006378 267.0
MMS1_k127_313486_7 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000000000000000000000000000000000000000000000005156 210.0
MMS1_k127_313486_8 Domain of unknown function DUF123 - - - 0.000000000000000000000000000001776 134.0
MMS1_k127_313486_9 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000002426 99.0
MMS1_k127_319387_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 8.026e-201 635.0
MMS1_k127_319387_1 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation - - - 0.000000000000000000000000000000002564 131.0
MMS1_k127_319387_2 Proto-chlorophyllide reductase 57 kD subunit - - - 0.00000000000000000001348 94.0
MMS1_k127_319387_3 - - - - 0.000000000000002613 80.0
MMS1_k127_319387_4 Long-chain fatty acid transport protein K06076 - - 0.00000000000006845 74.0
MMS1_k127_322825_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1037.0
MMS1_k127_322825_1 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.394e-251 779.0
MMS1_k127_322825_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 296.0
MMS1_k127_322825_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000006185 221.0
MMS1_k127_322825_4 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000576 188.0
MMS1_k127_322825_5 NADH ubiquinone oxidoreductase 17.2 kD subunit - - - 0.000000000000000000000000000000000000000000000001974 175.0
MMS1_k127_322825_6 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000005021 165.0
MMS1_k127_322825_7 protein conserved in bacteria - - - 0.0000000000000000000000000000000000003346 153.0
MMS1_k127_322825_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000001354 61.0
MMS1_k127_331652_0 Diguanylate cyclase - - - 2.917e-243 779.0
MMS1_k127_331652_1 Proton-conducting membrane transporter - - - 4.977e-240 759.0
MMS1_k127_331652_10 choline dehydrogenase activity - - - 0.0000000000000000000000000000000000001254 160.0
MMS1_k127_331652_11 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000008425 72.0
MMS1_k127_331652_12 epimerase - - - 0.000000003214 70.0
MMS1_k127_331652_2 Proton-conducting membrane transporter K12141 - - 1.079e-209 676.0
MMS1_k127_331652_3 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 436.0
MMS1_k127_331652_4 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 415.0
MMS1_k127_331652_5 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 309.0
MMS1_k127_331652_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000151 225.0
MMS1_k127_331652_7 - - - - 0.00000000000000000000000000000000000000000000000000000001437 222.0
MMS1_k127_331652_8 - - - - 0.000000000000000000000000000000000000000000000000000001052 210.0
MMS1_k127_331652_9 - - - - 0.00000000000000000000000000000000000000000007115 166.0
MMS1_k127_366186_0 DNA helicase K03657 - 3.6.4.12 0.0 1029.0
MMS1_k127_366186_2 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000001126 102.0
MMS1_k127_366186_3 ribosomal protein L11 K02687 - - 0.00000000016 64.0
MMS1_k127_392709_0 serine threonine protein kinase - - - 4.772e-315 978.0
MMS1_k127_392709_1 RNA polymerase sigma K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 471.0
MMS1_k127_392709_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 464.0
MMS1_k127_392709_3 - - - - 0.000000000000000000000000000000000000000000000000000004422 194.0
MMS1_k127_392709_4 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.000000000000000000000000000000001697 138.0
MMS1_k127_392709_5 - - - - 0.0000000000000003939 82.0
MMS1_k127_392709_6 - - - - 0.0000002241 59.0
MMS1_k127_416765_0 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 471.0
MMS1_k127_416765_1 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001896 291.0
MMS1_k127_416765_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000002621 235.0
MMS1_k127_416765_3 - - - - 0.000000000000000000000000002189 111.0
MMS1_k127_416765_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00001614 53.0
MMS1_k127_424251_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.236e-222 696.0
MMS1_k127_424251_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 1.777e-201 630.0
MMS1_k127_424251_10 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006739 243.0
MMS1_k127_424251_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000001234 233.0
MMS1_k127_424251_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000001569 228.0
MMS1_k127_424251_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000000000000000009562 225.0
MMS1_k127_424251_14 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000000000000007863 221.0
MMS1_k127_424251_15 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000003091 218.0
MMS1_k127_424251_16 binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000000000000000002781 214.0
MMS1_k127_424251_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000006955 193.0
MMS1_k127_424251_18 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000000005669 184.0
MMS1_k127_424251_19 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000000007008 171.0
MMS1_k127_424251_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 497.0
MMS1_k127_424251_20 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000000000001735 166.0
MMS1_k127_424251_21 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000005097 143.0
MMS1_k127_424251_22 Ribosomal protein L30 K02907 - - 0.0000000000000000000001689 97.0
MMS1_k127_424251_23 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000001897 86.0
MMS1_k127_424251_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 458.0
MMS1_k127_424251_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 432.0
MMS1_k127_424251_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 357.0
MMS1_k127_424251_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 342.0
MMS1_k127_424251_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 316.0
MMS1_k127_424251_8 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 285.0
MMS1_k127_424251_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001569 254.0
MMS1_k127_425858_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1730.0
MMS1_k127_425858_1 4Fe-4S dicluster domain K00184,K21308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 452.0
MMS1_k127_425858_2 DMSO reductase anchor subunit K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 340.0
MMS1_k127_425858_3 Catalyzes the reversible hydration of fumarate to (S)- malate K01676,K01678,K03780 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000007774 142.0
MMS1_k127_425858_5 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000006105 114.0
MMS1_k127_443538_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.845e-275 860.0
MMS1_k127_443538_1 The M ring may be actively involved in energy transduction K02409 - - 1.09e-231 730.0
MMS1_k127_443538_10 Protein of unknown function (DUF952) - - - 0.0000000000000000000000000000000000000000000003564 169.0
MMS1_k127_443538_11 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000683 178.0
MMS1_k127_443538_12 Flagellar hook-length control protein FliK - - - 0.0000000000000000000000001411 123.0
MMS1_k127_443538_13 Lectin MVL - - - 0.000000000003641 78.0
MMS1_k127_443538_14 - - - - 0.00001502 48.0
MMS1_k127_443538_2 Flagellar basal body rod FlgEFG protein C-terminal K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 585.0
MMS1_k127_443538_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 492.0
MMS1_k127_443538_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 463.0
MMS1_k127_443538_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 349.0
MMS1_k127_443538_6 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 332.0
MMS1_k127_443538_7 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01950,K12251 - 3.5.1.53,6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 294.0
MMS1_k127_443538_8 sugar phosphatases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002965 271.0
MMS1_k127_443538_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004072 236.0
MMS1_k127_443955_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000917 499.0
MMS1_k127_443955_1 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001047 264.0
MMS1_k127_443955_2 methionine biosynthesis - - - 0.00000000000000000000000000000000000000000000859 164.0
MMS1_k127_458969_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1387.0
MMS1_k127_458969_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0 1325.0
MMS1_k127_458969_10 Mg2 and Co2 transporter CorB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 512.0
MMS1_k127_458969_11 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 509.0
MMS1_k127_458969_12 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 409.0
MMS1_k127_458969_13 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 396.0
MMS1_k127_458969_14 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 384.0
MMS1_k127_458969_15 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 375.0
MMS1_k127_458969_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 375.0
MMS1_k127_458969_17 ABC 3 transport family K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 367.0
MMS1_k127_458969_18 ATPases associated with a variety of cellular activities K02074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008856 354.0
MMS1_k127_458969_19 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 328.0
MMS1_k127_458969_2 COG1138 Cytochrome c biogenesis factor K02198 - - 5.743e-310 960.0
MMS1_k127_458969_20 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 325.0
MMS1_k127_458969_21 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 317.0
MMS1_k127_458969_22 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 296.0
MMS1_k127_458969_23 Zinc-uptake complex component A periplasmic K02077,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 291.0
MMS1_k127_458969_24 COG0694 Thioredoxin-like proteins and domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000139 257.0
MMS1_k127_458969_25 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001405 259.0
MMS1_k127_458969_26 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005972 249.0
MMS1_k127_458969_27 Putative transmembrane protein (Alph_Pro_TM) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005168 246.0
MMS1_k127_458969_28 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000007766 241.0
MMS1_k127_458969_29 nucleic-acid-binding protein implicated in transcription termination K07742 - - 0.00000000000000000000000000000000000000000000000000000000000000000005577 237.0
MMS1_k127_458969_3 Participates in both transcription termination and antitermination K02600 - - 3.013e-269 837.0
MMS1_k127_458969_30 COG4235 Cytochrome c biogenesis factor K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000002756 244.0
MMS1_k127_458969_31 Redoxin K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000007932 235.0
MMS1_k127_458969_32 Molecular chaperone - - - 0.00000000000000000000000000000000000000000000000000000000000000004039 227.0
MMS1_k127_458969_33 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000000000000006539 224.0
MMS1_k127_458969_34 universal stress protein UspA and related nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000002096 206.0
MMS1_k127_458969_35 FlgJ-related protein K03796 - - 0.0000000000000000000000000000000000000000000000000000000003451 218.0
MMS1_k127_458969_36 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000004862 201.0
MMS1_k127_458969_37 - - - - 0.00000000000000000000000000000000000000000000000002592 199.0
MMS1_k127_458969_38 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.00000000000000000000000000000000000000000001289 168.0
MMS1_k127_458969_39 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000007762 168.0
MMS1_k127_458969_4 COG0744 Membrane carboxypeptidase (penicillin-binding protein) K05366 - 2.4.1.129,3.4.16.4 6.505e-260 819.0
MMS1_k127_458969_40 Ser Thr protein phosphatase - - - 0.000000000000000000000000000000000000002297 156.0
MMS1_k127_458969_41 Belongs to the BolA IbaG family K05527,K22066 - - 0.0000000000000000000000000000000376 131.0
MMS1_k127_458969_42 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000005944 99.0
MMS1_k127_458969_43 Protein of unknown function (DUF1178) - - - 0.000000000000000000002753 95.0
MMS1_k127_458969_44 CopG domain protein DNA-binding domain protein - - - 0.000000000000000001951 87.0
MMS1_k127_458969_46 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000003024 65.0
MMS1_k127_458969_47 - - - - 0.00000007449 60.0
MMS1_k127_458969_5 This protein is involved in the repair of mismatches in DNA K03555 - - 2.184e-240 753.0
MMS1_k127_458969_6 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 1.26e-211 675.0
MMS1_k127_458969_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 5.161e-208 659.0
MMS1_k127_458969_8 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 606.0
MMS1_k127_458969_9 Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 546.0
MMS1_k127_463525_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 567.0
MMS1_k127_463525_1 COG4942 Membrane-bound metallopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 390.0
MMS1_k127_463525_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 332.0
MMS1_k127_472554_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1263.0
MMS1_k127_472554_1 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 614.0
MMS1_k127_472554_10 COG2873 O-acetylhomoserine sulfhydrylase K01738,K01740 - 2.5.1.47,2.5.1.49 0.0000000000000000000000000000000000000000000000001235 180.0
MMS1_k127_472554_11 Outer membrane protein W K07275 - - 0.0000000000000000000000000000000000000000006929 167.0
MMS1_k127_472554_12 Protein of unknown function (DUF1491) - - - 0.0000000000000000000000000006664 129.0
MMS1_k127_472554_14 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000724 85.0
MMS1_k127_472554_2 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 594.0
MMS1_k127_472554_3 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 553.0
MMS1_k127_472554_4 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 451.0
MMS1_k127_472554_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 393.0
MMS1_k127_472554_6 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 376.0
MMS1_k127_472554_7 COG3143 Chemotaxis protein K03414 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006721 283.0
MMS1_k127_472554_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001113 274.0
MMS1_k127_472554_9 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000000005329 209.0
MMS1_k127_484007_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.113e-246 770.0
MMS1_k127_484007_1 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000003794 218.0
MMS1_k127_484007_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03406 - - 0.000000000000000000000000000000000000000000000000003875 191.0
MMS1_k127_54157_0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 1.836e-293 910.0
MMS1_k127_54157_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 1.163e-238 790.0
MMS1_k127_54157_10 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 342.0
MMS1_k127_54157_11 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 314.0
MMS1_k127_54157_12 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 290.0
MMS1_k127_54157_13 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003233 259.0
MMS1_k127_54157_14 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007092 258.0
MMS1_k127_54157_17 Macrocin-O-methyltransferase (TylF) - - - 0.0000000000000000006589 99.0
MMS1_k127_54157_18 Protein of unknown function (DUF3365) - - - 0.00000000000008997 84.0
MMS1_k127_54157_19 chlorophyll binding - - - 0.00000005742 65.0
MMS1_k127_54157_2 Radical SAM - - - 2.289e-222 701.0
MMS1_k127_54157_20 chlorophyll binding - - - 0.000449 52.0
MMS1_k127_54157_3 Aminotransferase K14261 - - 9.578e-206 663.0
MMS1_k127_54157_4 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 599.0
MMS1_k127_54157_5 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 501.0
MMS1_k127_54157_6 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 466.0
MMS1_k127_54157_7 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 407.0
MMS1_k127_54157_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 387.0
MMS1_k127_54157_9 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 337.0
MMS1_k127_545737_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1309.0
MMS1_k127_545737_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686,K19597 - 3.6.3.54 0.0 1064.0
MMS1_k127_545737_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000005964 213.0
MMS1_k127_545737_11 protein-(glutamine-N5) methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000001168 200.0
MMS1_k127_545737_12 PFAM sulfotransferase - - - 0.000000000000000000000000000000000000000000000000000006848 204.0
MMS1_k127_545737_13 - - - - 0.000000000000000000000000000000000000000000000001921 176.0
MMS1_k127_545737_14 COG4675 Microcystin-dependent protein - - - 0.000000000000000000000000000000000000000000001321 170.0
MMS1_k127_545737_15 MerR, DNA binding K19591,K19592 - - 0.0000000000000000000000000000000000000000001398 175.0
MMS1_k127_545737_16 - - - - 0.0000000000000000000000000000000000000000009744 166.0
MMS1_k127_545737_17 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000001547 164.0
MMS1_k127_545737_18 Tail Collar domain protein - - - 0.000000000000000000000000000000000000002233 163.0
MMS1_k127_545737_19 Phage Tail Collar Domain - - - 0.00000000000000000000000000000000003095 141.0
MMS1_k127_545737_2 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 601.0
MMS1_k127_545737_20 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.0000000000000000000000000000000001118 145.0
MMS1_k127_545737_21 Phospholipid methyltransferase - - - 0.0000000000000000000000000000003269 129.0
MMS1_k127_545737_22 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.00000000000001149 73.0
MMS1_k127_545737_23 Zinc-finger domain - - - 0.00000000000002565 77.0
MMS1_k127_545737_24 - - - - 0.000000000009105 70.0
MMS1_k127_545737_25 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000107 69.0
MMS1_k127_545737_26 PFAM Heavy metal transport detoxification protein K07213 - - 0.0000000001393 64.0
MMS1_k127_545737_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 485.0
MMS1_k127_545737_4 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 446.0
MMS1_k127_545737_5 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 441.0
MMS1_k127_545737_6 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 400.0
MMS1_k127_545737_7 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 364.0
MMS1_k127_545737_8 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 346.0
MMS1_k127_545737_9 LysR substrate binding domain K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001405 284.0
MMS1_k127_550491_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.384e-319 982.0
MMS1_k127_550491_1 Cysteine-rich domain - - - 5.932e-199 628.0
MMS1_k127_550491_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 300.0
MMS1_k127_550491_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 293.0
MMS1_k127_550491_4 COG1592 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007725 253.0
MMS1_k127_550491_5 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003807 242.0
MMS1_k127_550491_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000000007343 171.0
MMS1_k127_550491_7 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000005252 109.0
MMS1_k127_550491_8 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000818 108.0
MMS1_k127_550491_9 Pfam:DUF1049 - - - 0.000000007515 61.0
MMS1_k127_556054_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0 1079.0
MMS1_k127_556054_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 4.319e-197 619.0
MMS1_k127_556054_10 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000768 134.0
MMS1_k127_556054_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 605.0
MMS1_k127_556054_3 Long-chain fatty acid transport protein K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 337.0
MMS1_k127_556054_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009921 329.0
MMS1_k127_556054_5 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005304 265.0
MMS1_k127_556054_6 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008143 248.0
MMS1_k127_556054_7 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000009772 243.0
MMS1_k127_556054_8 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0000000000000000000000000000000000000000000000000005016 186.0
MMS1_k127_556054_9 4Fe-4S dicluster domain K16887 - - 0.000000000000000000000000000000000000000000000001805 180.0
MMS1_k127_561742_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1612.0
MMS1_k127_561742_1 HD domain - - - 3.609e-294 913.0
MMS1_k127_561742_2 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 312.0
MMS1_k127_561742_3 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000001532 98.0
MMS1_k127_577502_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 1.35e-213 676.0
MMS1_k127_577502_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 518.0
MMS1_k127_577502_2 seryl-tRNA aminoacylation K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 500.0
MMS1_k127_577502_3 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 394.0
MMS1_k127_577502_4 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 366.0
MMS1_k127_577502_5 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001166 237.0
MMS1_k127_577502_6 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000001595 236.0
MMS1_k127_577502_7 protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000003288 136.0
MMS1_k127_577502_9 Ribbon-helix-helix domain - - - 0.000000000000000001596 89.0
MMS1_k127_613301_0 PrkA AAA domain K07180 - - 0.0 1201.0
MMS1_k127_613301_1 SpoVR like protein K06415 - - 2.379e-260 832.0
MMS1_k127_613301_2 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 612.0
MMS1_k127_613301_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 536.0
MMS1_k127_613301_4 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 497.0
MMS1_k127_613301_5 Mitochondrial fission ELM1 K07276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 392.0
MMS1_k127_613301_6 Homospermidine synthase K00808 - 2.5.1.44 0.000000000000000000000000000000000000000000000000000002672 196.0
MMS1_k127_613301_7 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000005079 197.0
MMS1_k127_630304_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 573.0
MMS1_k127_630304_1 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 575.0
MMS1_k127_630304_10 COG2913 Small protein A (tmRNA-binding) - - - 0.000000000000000000000000000000000001226 144.0
MMS1_k127_630304_11 Uncharacterized ACR, COG1399 - - - 0.00000000000000000000000000000000002075 143.0
MMS1_k127_630304_12 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000000000001362 132.0
MMS1_k127_630304_13 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000005966 116.0
MMS1_k127_630304_14 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000001129 89.0
MMS1_k127_630304_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 463.0
MMS1_k127_630304_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 419.0
MMS1_k127_630304_4 glycosyl - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 389.0
MMS1_k127_630304_5 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000962 279.0
MMS1_k127_630304_6 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001702 267.0
MMS1_k127_630304_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000000000000000003499 213.0
MMS1_k127_630304_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000000679 177.0
MMS1_k127_630304_9 transcriptional regulator, MerR - - - 0.0000000000000000000000000000000000000000007169 162.0
MMS1_k127_634384_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1329.0
MMS1_k127_634384_1 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 333.0
MMS1_k127_634384_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000188 234.0
MMS1_k127_634384_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
MMS1_k127_634384_4 - - - - 0.000000000000000000000000000000000000000932 159.0
MMS1_k127_634384_5 Phasin protein - - - 0.00000000000000000000000005171 113.0
MMS1_k127_639677_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 2.33e-289 897.0
MMS1_k127_639677_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.909e-209 663.0
MMS1_k127_639677_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005466 280.0
MMS1_k127_639677_11 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008641 268.0
MMS1_k127_639677_12 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000001647 151.0
MMS1_k127_639677_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000006484 107.0
MMS1_k127_639677_14 Sporulation related domain - - - 0.0000000000000000001025 102.0
MMS1_k127_639677_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000005958 74.0
MMS1_k127_639677_2 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 2.235e-201 637.0
MMS1_k127_639677_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 426.0
MMS1_k127_639677_4 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 408.0
MMS1_k127_639677_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 394.0
MMS1_k127_639677_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 355.0
MMS1_k127_639677_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 326.0
MMS1_k127_639677_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 327.0
MMS1_k127_639677_9 COG1994 Zn-dependent proteases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 292.0
MMS1_k127_650976_0 Homospermidine synthase K00808 - 2.5.1.44 2.48e-227 715.0
MMS1_k127_669195_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1157.0
MMS1_k127_669195_1 Transcriptional accessory protein K06959 - - 1.827e-306 962.0
MMS1_k127_669195_10 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 580.0
MMS1_k127_669195_11 Protoglobin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 559.0
MMS1_k127_669195_12 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 551.0
MMS1_k127_669195_13 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 546.0
MMS1_k127_669195_14 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 544.0
MMS1_k127_669195_15 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 513.0
MMS1_k127_669195_16 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 513.0
MMS1_k127_669195_17 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 490.0
MMS1_k127_669195_18 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 481.0
MMS1_k127_669195_19 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 462.0
MMS1_k127_669195_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 7.897e-286 891.0
MMS1_k127_669195_20 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 450.0
MMS1_k127_669195_21 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 482.0
MMS1_k127_669195_22 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 439.0
MMS1_k127_669195_23 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 432.0
MMS1_k127_669195_24 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 424.0
MMS1_k127_669195_25 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 404.0
MMS1_k127_669195_26 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 419.0
MMS1_k127_669195_27 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 397.0
MMS1_k127_669195_28 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 368.0
MMS1_k127_669195_29 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 377.0
MMS1_k127_669195_3 Protein of unknown function - - - 1.904e-261 842.0
MMS1_k127_669195_30 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 355.0
MMS1_k127_669195_31 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 346.0
MMS1_k127_669195_32 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 344.0
MMS1_k127_669195_33 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 339.0
MMS1_k127_669195_34 protein conserved in bacteria K09987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 324.0
MMS1_k127_669195_35 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 349.0
MMS1_k127_669195_36 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 290.0
MMS1_k127_669195_37 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000495 268.0
MMS1_k127_669195_38 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002499 271.0
MMS1_k127_669195_39 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02017 - 3.6.3.29,3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000001253 269.0
MMS1_k127_669195_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.553e-242 752.0
MMS1_k127_669195_40 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001049 244.0
MMS1_k127_669195_41 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002088 239.0
MMS1_k127_669195_42 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 - 2.1.1.197,6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000465 249.0
MMS1_k127_669195_43 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007345 231.0
MMS1_k127_669195_44 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000001051 230.0
MMS1_k127_669195_45 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000005535 227.0
MMS1_k127_669195_46 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000001565 235.0
MMS1_k127_669195_47 carboxylic ester hydrolase activity K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000009359 233.0
MMS1_k127_669195_48 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000001328 215.0
MMS1_k127_669195_49 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.00000000000000000000000000000000000000000000000000000000006166 212.0
MMS1_k127_669195_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.894e-225 705.0
MMS1_k127_669195_50 Methyltransferase domain K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000002137 217.0
MMS1_k127_669195_51 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000001165 173.0
MMS1_k127_669195_52 Protein of unknown function (DUF1465) K13592 - - 0.00000000000000000000000000000000000000000000002301 174.0
MMS1_k127_669195_53 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000002696 168.0
MMS1_k127_669195_54 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000000000001385 145.0
MMS1_k127_669195_55 polysaccharide deacetylase - - - 0.0000000000000000000000000000004112 136.0
MMS1_k127_669195_56 Belongs to the frataxin family K19054 - 1.16.3.1 0.000000000000000000000000000009588 121.0
MMS1_k127_669195_57 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000005078 109.0
MMS1_k127_669195_58 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000003332 94.0
MMS1_k127_669195_59 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000007959 95.0
MMS1_k127_669195_6 Competence protein K02238 - - 4.163e-216 693.0
MMS1_k127_669195_61 PFAM response regulator receiver K07665 - - 0.00000000000000007447 89.0
MMS1_k127_669195_62 - - - - 0.000000000000003698 77.0
MMS1_k127_669195_7 Nickel-dependent hydrogenase - - - 2.031e-209 661.0
MMS1_k127_669195_8 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 608.0
MMS1_k127_669195_9 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 601.0
MMS1_k127_672445_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1236.0
MMS1_k127_672445_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 437.0
MMS1_k127_672445_10 COG3209 Rhs family protein - - - 0.000000000000000000000003095 117.0
MMS1_k127_672445_11 Asparagine synthase K01953 - 6.3.5.4 0.00000002436 65.0
MMS1_k127_672445_2 PFAM tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 419.0
MMS1_k127_672445_3 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 411.0
MMS1_k127_672445_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 383.0
MMS1_k127_672445_5 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 335.0
MMS1_k127_672445_6 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000000000000000000585 204.0
MMS1_k127_672445_7 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000000005109 147.0
MMS1_k127_672445_8 Cytochrome c K19713 - 1.8.2.2 0.000000000000000000000000000002156 126.0
MMS1_k127_672445_9 Cytochrome c K19713 - 1.8.2.2 0.000000000000000000000000001555 116.0
MMS1_k127_685364_0 AcrB/AcrD/AcrF family - - - 0.0 1401.0
MMS1_k127_685364_1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 - - 1.541e-262 820.0
MMS1_k127_685364_10 Membrane fusogenic activity K09806 - - 0.0000000000000001436 80.0
MMS1_k127_685364_12 Putative regulatory protein - - - 0.000000000002829 80.0
MMS1_k127_685364_13 Domain of unknown function (DUF4189) - - - 0.00001116 54.0
MMS1_k127_685364_2 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 376.0
MMS1_k127_685364_3 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 312.0
MMS1_k127_685364_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007378 301.0
MMS1_k127_685364_5 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001003 276.0
MMS1_k127_685364_6 COG3023 Negative regulator of beta-lactamase expression K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000004464 279.0
MMS1_k127_685364_7 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000412 264.0
MMS1_k127_685364_8 Ribbon-helix-helix domain - - - 0.00000000000000000000000000000000000000000001665 164.0
MMS1_k127_685364_9 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000000000004861 122.0
MMS1_k127_712852_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 4.249e-207 652.0
MMS1_k127_712852_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 533.0
MMS1_k127_712852_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001541 237.0
MMS1_k127_712852_13 - - - - 0.000000000000000002347 91.0
MMS1_k127_712852_2 Putative beta-barrel porin 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 489.0
MMS1_k127_712852_3 prephenate dehydrogenase K00220 - 1.3.1.12,1.3.1.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 426.0
MMS1_k127_712852_4 Carbohydrate-selective porin, OprB family K07267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 376.0
MMS1_k127_712852_5 methionine biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 336.0
MMS1_k127_712852_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 314.0
MMS1_k127_712852_7 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 309.0
MMS1_k127_712852_8 chorismate mutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003356 276.0
MMS1_k127_712852_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006377 270.0
MMS1_k127_715893_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K05922 - 1.12.5.1 2.174e-291 903.0
MMS1_k127_715893_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.17e-198 627.0
MMS1_k127_715893_10 nitrate reductase activity - - - 0.00000000000000000000000000000000000000000000000000001986 211.0
MMS1_k127_715893_11 PFAM Peptidase A31, hydrogen uptake protein K03605 - - 0.00000000000000000000000000001071 129.0
MMS1_k127_715893_12 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000000000296 100.0
MMS1_k127_715893_13 zinc ion binding K00859,K09862 GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 2.7.1.24 0.00000000000001398 76.0
MMS1_k127_715893_14 Resolvase - - - 0.000001783 52.0
MMS1_k127_715893_15 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.00001675 50.0
MMS1_k127_715893_2 4Fe-4S ferredoxin iron-sulfur binding domain protein K21834 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 550.0
MMS1_k127_715893_3 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 521.0
MMS1_k127_715893_4 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 369.0
MMS1_k127_715893_5 COG1530 Ribonucleases G and E K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 371.0
MMS1_k127_715893_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 343.0
MMS1_k127_715893_7 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000648 282.0
MMS1_k127_715893_8 Uncharacterised protein family (UPF0262) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003363 248.0
MMS1_k127_715893_9 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000004806 233.0
MMS1_k127_735789_0 - - - - 0.0 2023.0
MMS1_k127_735789_1 Transport of potassium into the cell K03549 - - 1.33e-270 846.0
MMS1_k127_735789_10 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 356.0
MMS1_k127_735789_11 Extracellular solute-binding protein family 3 K07679 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 360.0
MMS1_k127_735789_12 PFAM Mammalian cell entry related domain protein K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 332.0
MMS1_k127_735789_13 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 335.0
MMS1_k127_735789_14 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 286.0
MMS1_k127_735789_15 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003174 263.0
MMS1_k127_735789_16 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001293 258.0
MMS1_k127_735789_17 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000003188 239.0
MMS1_k127_735789_18 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000004869 214.0
MMS1_k127_735789_19 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741,K03892 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000005092 201.0
MMS1_k127_735789_2 Anion-transporting ATPase K01551 - 3.6.3.16 7.753e-260 813.0
MMS1_k127_735789_20 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000000000000000000173 196.0
MMS1_k127_735789_21 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000151 172.0
MMS1_k127_735789_22 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000001596 168.0
MMS1_k127_735789_23 Arsenical resistance operon trans-acting repressor ArsD - - - 0.000000000000000000000000000000000000000003421 158.0
MMS1_k127_735789_24 sulfur oxidation protein (SoxY) K17226 - - 0.00000000000000000000000000000000000000001936 161.0
MMS1_k127_735789_25 - - - - 0.000000000000000000000000000000000000001402 153.0
MMS1_k127_735789_26 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000000000000001415 122.0
MMS1_k127_735789_27 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000004012 121.0
MMS1_k127_735789_28 Histidine kinase - - - 0.0000000000000000000000001689 125.0
MMS1_k127_735789_29 Cytochrome C oxidase, cbb3-type, subunit III K17223 - - 0.00000000000000000000003391 103.0
MMS1_k127_735789_3 5'-nucleotidase, C-terminal domain K17224 - - 1.855e-250 783.0
MMS1_k127_735789_4 Transport of potassium into the cell K03549 - - 5.12e-245 804.0
MMS1_k127_735789_5 COG0798 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 586.0
MMS1_k127_735789_6 Cytochrome c K22474 - 1.1.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 452.0
MMS1_k127_735789_7 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 440.0
MMS1_k127_735789_8 paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 419.0
MMS1_k127_735789_9 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 361.0
MMS1_k127_73588_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 2162.0
MMS1_k127_73588_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1557.0
MMS1_k127_73588_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 8.482e-210 661.0
MMS1_k127_73588_11 PFAM major facilitator superfamily MFS_1 K02575 - - 1.056e-206 650.0
MMS1_k127_73588_12 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 589.0
MMS1_k127_73588_13 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 588.0
MMS1_k127_73588_14 Bacterial regulatory protein, Fis family K10912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 566.0
MMS1_k127_73588_15 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 549.0
MMS1_k127_73588_16 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 542.0
MMS1_k127_73588_17 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 490.0
MMS1_k127_73588_18 COG0845 Membrane-fusion protein K12542 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 496.0
MMS1_k127_73588_19 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 481.0
MMS1_k127_73588_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1467.0
MMS1_k127_73588_20 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 488.0
MMS1_k127_73588_21 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 474.0
MMS1_k127_73588_22 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000937 448.0
MMS1_k127_73588_23 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 441.0
MMS1_k127_73588_24 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 448.0
MMS1_k127_73588_25 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 447.0
MMS1_k127_73588_26 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 430.0
MMS1_k127_73588_27 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 425.0
MMS1_k127_73588_28 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 413.0
MMS1_k127_73588_29 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 409.0
MMS1_k127_73588_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1230.0
MMS1_k127_73588_30 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 402.0
MMS1_k127_73588_31 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 385.0
MMS1_k127_73588_32 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 374.0
MMS1_k127_73588_33 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 366.0
MMS1_k127_73588_34 PFAM Aldose 1-epimerase K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 347.0
MMS1_k127_73588_35 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 345.0
MMS1_k127_73588_36 COG0512 Anthranilate para-aminobenzoate synthases component II K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 336.0
MMS1_k127_73588_37 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 358.0
MMS1_k127_73588_38 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 327.0
MMS1_k127_73588_39 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 318.0
MMS1_k127_73588_4 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1191.0
MMS1_k127_73588_40 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 317.0
MMS1_k127_73588_41 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 302.0
MMS1_k127_73588_42 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 302.0
MMS1_k127_73588_43 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0006950,GO:0006979,GO:0008113,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0030091,GO:0033744,GO:0036456,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114,GO:0071704,GO:1901564 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 301.0
MMS1_k127_73588_44 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 294.0
MMS1_k127_73588_45 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 291.0
MMS1_k127_73588_46 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002588 272.0
MMS1_k127_73588_47 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001426 274.0
MMS1_k127_73588_48 COG2867 Oligoketide cyclase lipid transport protein K18588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007128 250.0
MMS1_k127_73588_49 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003488 264.0
MMS1_k127_73588_5 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K12541 - - 0.0 1011.0
MMS1_k127_73588_50 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000002097 250.0
MMS1_k127_73588_51 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004236 246.0
MMS1_k127_73588_52 methyl-accepting chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001419 255.0
MMS1_k127_73588_53 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000001415 232.0
MMS1_k127_73588_54 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000000000000000000000000000000000251 213.0
MMS1_k127_73588_55 Protein conserved in bacteria K09991 - - 0.0000000000000000000000000000000000000000000000000000000004136 209.0
MMS1_k127_73588_56 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000001911 207.0
MMS1_k127_73588_57 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000001344 210.0
MMS1_k127_73588_58 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000000000000000003315 176.0
MMS1_k127_73588_59 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000005906 175.0
MMS1_k127_73588_6 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 4.293e-319 989.0
MMS1_k127_73588_60 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.0000000000000000000000000000000000000000237 161.0
MMS1_k127_73588_61 RDD family - - - 0.0000000000000000000000000000000000001473 153.0
MMS1_k127_73588_62 Septum formation initiator - - - 0.000000000000000000000000000000001716 132.0
MMS1_k127_73588_63 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000000000000000003552 119.0
MMS1_k127_73588_64 oxygen carrier activity K07216 - - 0.00000000000000000000000009353 111.0
MMS1_k127_73588_65 - - - - 0.0000000000002683 76.0
MMS1_k127_73588_7 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K12541 - - 2.315e-245 769.0
MMS1_k127_73588_8 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.652e-243 755.0
MMS1_k127_73588_9 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 4.44e-234 731.0
MMS1_k127_740839_0 AcrB/AcrD/AcrF family K18138 - - 0.0 1435.0
MMS1_k127_740839_1 Uncharacterized conserved protein (DUF2075) - - - 3.286e-271 849.0
MMS1_k127_740839_10 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000464 137.0
MMS1_k127_740839_11 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000001001 139.0
MMS1_k127_740839_12 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000002297 83.0
MMS1_k127_740839_13 Helix-turn-helix domain - - - 0.0000002378 55.0
MMS1_k127_740839_2 Major facilitator Superfamily K03446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 512.0
MMS1_k127_740839_3 methyl-accepting chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 424.0
MMS1_k127_740839_4 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 424.0
MMS1_k127_740839_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 381.0
MMS1_k127_740839_6 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 307.0
MMS1_k127_740839_7 Plasmid encoded RepA protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002393 284.0
MMS1_k127_740839_8 multidrug resistance K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006101 260.0
MMS1_k127_740839_9 ETC complex I subunit conserved region - - - 0.0000000000000000000000000000000000003327 142.0
MMS1_k127_75212_0 Chromosome Partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 467.0
MMS1_k127_75212_1 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 392.0
MMS1_k127_75212_10 UvrD/REP helicase N-terminal domain - - - 0.000006315 55.0
MMS1_k127_75212_11 resolvase domain - - - 0.0008835 45.0
MMS1_k127_75212_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 374.0
MMS1_k127_75212_3 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 356.0
MMS1_k127_75212_4 UvrD/REP helicase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 332.0
MMS1_k127_75212_5 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 304.0
MMS1_k127_75212_6 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000000000000000000004151 163.0
MMS1_k127_75212_7 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.00000000000000000000000000000000000000003228 154.0
MMS1_k127_75212_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.0000000000005222 69.0
MMS1_k127_767675_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 452.0
MMS1_k127_767675_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 295.0
MMS1_k127_767675_2 Preprotein translocase subunit SecG K03075 - - 0.000000000000000000000000000000009154 132.0
MMS1_k127_789634_0 PFAM von Willebrand factor type A - - - 0.0 1027.0
MMS1_k127_789634_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 2.106e-292 899.0
MMS1_k127_789634_2 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 465.0
MMS1_k127_789634_3 Proline racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 373.0
MMS1_k127_789634_4 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
MMS1_k127_789634_5 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.000000000000000000000000000000000000000000000000000001351 209.0
MMS1_k127_819501_0 Belongs to the heat shock protein 70 family K04045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 605.0
MMS1_k127_819501_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 363.0
MMS1_k127_819501_2 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 351.0
MMS1_k127_819501_3 Cation transporter/ATPase, N-terminus K01535 - 3.6.3.6 0.000000000000000002865 89.0
MMS1_k127_819501_4 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601 - 4.1.1.39 0.0000000000001445 71.0
MMS1_k127_823953_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 7.727e-261 813.0
MMS1_k127_823953_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 3.435e-226 708.0
MMS1_k127_823953_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 620.0
MMS1_k127_825693_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 550.0
MMS1_k127_825693_1 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000005431 237.0
MMS1_k127_825693_2 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000002163 211.0
MMS1_k127_825693_3 protein conserved in bacteria K09798 - - 0.0000000000000000000000000000000000000000000000000000000003629 216.0
MMS1_k127_829623_0 aminopeptidase N K01256 - 3.4.11.2 1.234e-305 960.0
MMS1_k127_829623_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.211e-195 619.0
MMS1_k127_829623_10 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 336.0
MMS1_k127_829623_11 Belongs to the SfsA family K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 327.0
MMS1_k127_829623_12 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 293.0
MMS1_k127_829623_13 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 301.0
MMS1_k127_829623_14 Long-chain fatty acid transport protein K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 304.0
MMS1_k127_829623_15 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000358 287.0
MMS1_k127_829623_16 Uncharacterized protein conserved in bacteria (DUF2066) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002727 278.0
MMS1_k127_829623_17 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008473 265.0
MMS1_k127_829623_18 COG0593 ATPase involved in DNA replication initiation - - - 0.00000000000000000000000000000000000000000000000000000000000000000005344 237.0
MMS1_k127_829623_19 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000372 237.0
MMS1_k127_829623_2 Enolase, C-terminal TIM barrel domain K01689 - 4.2.1.11 1.539e-194 651.0
MMS1_k127_829623_20 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000001536 113.0
MMS1_k127_829623_21 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000002543 109.0
MMS1_k127_829623_22 - - - - 0.00000000000000002774 87.0
MMS1_k127_829623_23 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.0002519 53.0
MMS1_k127_829623_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 510.0
MMS1_k127_829623_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 438.0
MMS1_k127_829623_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 437.0
MMS1_k127_829623_6 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 434.0
MMS1_k127_829623_7 MarR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 393.0
MMS1_k127_829623_8 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 380.0
MMS1_k127_829623_9 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 347.0
MMS1_k127_837879_0 oligoendopeptidase F K08602 - - 1.875e-286 889.0
MMS1_k127_837879_1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 607.0
MMS1_k127_837879_10 TIGRFAM protein TolA - - - 0.000000000000000000000000000000000001464 143.0
MMS1_k127_837879_2 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 597.0
MMS1_k127_837879_3 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 598.0
MMS1_k127_837879_4 IMP dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 299.0
MMS1_k127_837879_5 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000003133 263.0
MMS1_k127_837879_6 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000002505 242.0
MMS1_k127_837879_7 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000313 190.0
MMS1_k127_837879_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000005704 192.0
MMS1_k127_837879_9 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000000000000000000000007217 177.0
MMS1_k127_855024_0 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.0 1380.0
MMS1_k127_855024_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 455.0
MMS1_k127_855024_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 460.0
MMS1_k127_855024_3 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 334.0
MMS1_k127_855024_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000001804 190.0
MMS1_k127_855024_5 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000001046 141.0
MMS1_k127_855024_6 Multicopper oxidase - - - 0.000000000000004011 85.0
MMS1_k127_864354_0 AcrB/AcrD/AcrF family - - - 0.0 1250.0
MMS1_k127_896898_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 5.054e-209 656.0
MMS1_k127_896898_1 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 514.0
MMS1_k127_896898_2 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 384.0
MMS1_k127_896898_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 349.0
MMS1_k127_896898_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 293.0
MMS1_k127_896898_5 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000001837 64.0
MMS1_k127_901108_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 1.401e-316 986.0
MMS1_k127_901108_1 Glycosyl hydrolases family 15 - - - 1.091e-267 837.0
MMS1_k127_901108_2 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 1.767e-208 655.0
MMS1_k127_901108_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 355.0
MMS1_k127_901108_4 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001001 267.0
MMS1_k127_901108_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.00000000000000000000000000000000000000000000000000000000000009047 243.0
MMS1_k127_901108_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000003553 209.0
MMS1_k127_901108_7 Cation efflux family - - - 0.00000000000000000000000000000000000000000000001835 173.0
MMS1_k127_901108_8 Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain K08738 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005758,GO:0006091,GO:0006119,GO:0006122,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045155,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070013,GO:0070469,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 - 0.00000000000000000000000000003509 123.0
MMS1_k127_901169_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.738e-282 873.0
MMS1_k127_901169_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 7.68e-268 829.0
MMS1_k127_901169_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 422.0
MMS1_k127_901169_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 374.0
MMS1_k127_901169_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000007623 212.0
MMS1_k127_901169_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000001317 157.0
MMS1_k127_901169_6 DsrE/DsrF-like family - - - 0.0000000000004242 69.0
MMS1_k127_906189_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1242.0
MMS1_k127_906189_1 COG1194 A G-specific DNA glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 516.0
MMS1_k127_906189_2 Domain of unknown function (DUF1794) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 313.0
MMS1_k127_906189_3 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000378 200.0
MMS1_k127_906189_4 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000001069 164.0
MMS1_k127_906189_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000005345 141.0
MMS1_k127_906189_6 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000009454 117.0
MMS1_k127_906189_7 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000000000000000000001001 111.0
MMS1_k127_913878_0 argininosuccinate lyase K01755 - 4.3.2.1 7.111e-241 760.0
MMS1_k127_913878_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 2.091e-201 636.0
MMS1_k127_913878_2 Domain of unknown function (DUF4175) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 485.0
MMS1_k127_913878_3 cell division K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 374.0
MMS1_k127_913878_4 Cell division protein K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 362.0
MMS1_k127_913878_5 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 308.0
MMS1_k127_913878_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000004833 224.0
MMS1_k127_913878_7 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000002777 221.0
MMS1_k127_913878_8 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000000000000000000000000000000000000003865 216.0
MMS1_k127_913878_9 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000008557 149.0
MMS1_k127_915229_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 4.298e-216 676.0
MMS1_k127_915229_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.153e-215 679.0
MMS1_k127_915229_10 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000003043 218.0
MMS1_k127_915229_11 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000007339 188.0
MMS1_k127_915229_12 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000001572 151.0
MMS1_k127_915229_13 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000008169 117.0
MMS1_k127_915229_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 577.0
MMS1_k127_915229_3 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004105 498.0
MMS1_k127_915229_4 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 492.0
MMS1_k127_915229_5 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 430.0
MMS1_k127_915229_6 COG1253 Hemolysins and related proteins containing CBS domains K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 387.0
MMS1_k127_915229_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 384.0
MMS1_k127_915229_8 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 317.0
MMS1_k127_915229_9 May be involved in the biosynthesis of molybdopterin K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 293.0
MMS1_k127_919220_0 Putative diguanylate phosphodiesterase - - - 5.344e-280 884.0
MMS1_k127_919220_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007048 571.0
MMS1_k127_919220_10 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000001076 175.0
MMS1_k127_919220_11 thioesterase K07107 - - 0.0000000000000000000000000000000000000000001839 173.0
MMS1_k127_919220_2 Protein conserved in bacteria K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 446.0
MMS1_k127_919220_3 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 417.0
MMS1_k127_919220_4 COG0811 Biopolymer transport proteins K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 404.0
MMS1_k127_919220_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000002461 250.0
MMS1_k127_919220_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000001295 244.0
MMS1_k127_919220_7 TIGRFAM protein TolA - - - 0.0000000000000000000000000000000000000000000000000000000000863 217.0
MMS1_k127_919220_8 Biopolymer transport protein K03560 - - 0.000000000000000000000000000000000000000000000000000000000219 206.0
MMS1_k127_919220_9 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000009321 191.0
MMS1_k127_922827_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2563.0
MMS1_k127_922827_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1298.0
MMS1_k127_922827_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 1.228e-312 961.0
MMS1_k127_922827_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 297.0
MMS1_k127_922827_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003259 245.0
MMS1_k127_922827_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000001201 91.0
MMS1_k127_923448_0 Dehydrogenase K00101 - 1.1.2.3 1.018e-201 633.0
MMS1_k127_923448_1 methyl-accepting chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 493.0
MMS1_k127_923448_10 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 297.0
MMS1_k127_923448_11 COG0784 FOG CheY-like receiver K11443 - - 0.0000000000000000000000000000000000000000000000000000000000004367 214.0
MMS1_k127_923448_12 alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000003812 211.0
MMS1_k127_923448_13 - - - - 0.00000000000000000000000000000000000000000002998 164.0
MMS1_k127_923448_14 - - - - 0.000000000000000000000000000000000000001615 160.0
MMS1_k127_923448_15 Protein of unknown function (DUF423) - - - 0.00000000000000000000000007456 111.0
MMS1_k127_923448_16 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000002303 105.0
MMS1_k127_923448_2 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 460.0
MMS1_k127_923448_3 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 458.0
MMS1_k127_923448_4 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 439.0
MMS1_k127_923448_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 391.0
MMS1_k127_923448_6 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 383.0
MMS1_k127_923448_7 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 342.0
MMS1_k127_923448_8 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 340.0
MMS1_k127_923448_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 320.0
MMS1_k127_944577_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.102e-294 919.0
MMS1_k127_944577_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 567.0
MMS1_k127_944577_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 334.0
MMS1_k127_944577_3 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 314.0
MMS1_k127_944577_4 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001308 277.0
MMS1_k127_944577_5 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000003595 213.0
MMS1_k127_944577_6 ArsC family - - - 0.00000000000000000000000000000000000000000000000006105 179.0
MMS1_k127_944577_7 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000001028 74.0
MMS1_k127_968197_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 499.0
MMS1_k127_968197_1 Ferredoxin K04755 - - 0.00000000000000000000000000000000000000000000000000000009116 196.0
MMS1_k127_968197_2 protein conserved in bacteria - - - 0.000000000000000000000000000000005989 128.0
MMS1_k127_968197_3 transposition K07497 - - 0.000000000003702 66.0
MMS1_k127_976857_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1072.0
MMS1_k127_976857_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 2.765e-213 670.0
MMS1_k127_976857_2 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008754 587.0
MMS1_k127_976857_3 Flagellar GTP-binding protein K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 460.0
MMS1_k127_976857_4 COG1317 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.0000000000000000000000000000000000000000000000000000000000146 215.0
MMS1_k127_976857_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000000000000004001 168.0
MMS1_k127_976857_6 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000006058 165.0
MMS1_k127_981689_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 2.526e-307 959.0
MMS1_k127_981689_1 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 1.27e-286 891.0
MMS1_k127_981689_10 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 274.0
MMS1_k127_981689_11 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000001223 190.0
MMS1_k127_981689_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003082 164.0
MMS1_k127_981689_13 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0002932 45.0
MMS1_k127_981689_2 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 2.153e-263 820.0
MMS1_k127_981689_3 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 1.139e-244 767.0
MMS1_k127_981689_4 amino acid - - - 5.917e-230 723.0
MMS1_k127_981689_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 598.0
MMS1_k127_981689_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 554.0
MMS1_k127_981689_7 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 420.0
MMS1_k127_981689_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 309.0
MMS1_k127_981689_9 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001612 277.0
MMS1_k127_981719_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.65e-219 691.0
MMS1_k127_981719_1 Bacterial sugar transferase K00996 - 2.7.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006707 454.0
MMS1_k127_981719_2 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 386.0
MMS1_k127_981719_3 polysaccharide deacetylase - - - 0.000000000000000000000000000000000007998 157.0
MMS1_k127_981719_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000005803 132.0
MMS1_k127_981719_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000005287 120.0
MMS1_k127_981719_6 Glycosyltransferase Family 4 - - - 0.0000000009493 70.0
MMS1_k127_999380_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 1.411e-283 877.0
MMS1_k127_999380_1 Major Facilitator Superfamily K08167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 445.0
MMS1_k127_999380_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000001764 257.0
MMS1_k127_999380_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001071 256.0
MMS1_k127_999380_4 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000006532 221.0