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Overview

ID MAG02741
Name MMS2_bin.49
Sample SMP0065
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Thiomicrospirales
Family Thiomicrospiraceae
Genus Hydrogenovibrio
Species
Assembly information
Completeness (%) 73.9
Contamination (%) 4.24
GC content (%) 50.0
N50 (bp) 3,803
Genome size (bp) 1,615,324

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1734

Gene name Description KEGG GOs EC E-value Score Sequence
MMS2_k127_101945_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 546.0
MMS2_k127_101945_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 354.0
MMS2_k127_102889_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 597.0
MMS2_k127_102889_1 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 426.0
MMS2_k127_102889_2 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 293.0
MMS2_k127_102889_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005493 267.0
MMS2_k127_102889_4 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000000000000000000000000000000000001166 202.0
MMS2_k127_1032147_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 1.13e-297 920.0
MMS2_k127_1032147_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 289.0
MMS2_k127_1039530_0 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 518.0
MMS2_k127_1039530_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000002186 66.0
MMS2_k127_1047749_0 PD-(D/E)XK nuclease superfamily - - - 0.0 1191.0
MMS2_k127_1058768_0 7TMR-DISM extracellular 2 - - - 1.077e-196 628.0
MMS2_k127_1058768_1 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009622 314.0
MMS2_k127_1058768_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 319.0
MMS2_k127_1058768_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002017 239.0
MMS2_k127_1076874_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 370.0
MMS2_k127_1076874_1 Prokaryotic cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 345.0
MMS2_k127_1076874_2 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000005476 106.0
MMS2_k127_1077225_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 5e-324 993.0
MMS2_k127_1077225_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000001421 106.0
MMS2_k127_1077316_0 Co Zn Cd efflux system component K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 401.0
MMS2_k127_1077316_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.00000000000000000000000000000000000002067 147.0
MMS2_k127_1088515_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1339.0
MMS2_k127_1088515_1 DUF1704 - - - 0.0 1025.0
MMS2_k127_1088515_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 584.0
MMS2_k127_1088515_3 Thioredoxin K03671,K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 448.0
MMS2_k127_1088515_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 420.0
MMS2_k127_1088515_5 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 409.0
MMS2_k127_1088515_6 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 303.0
MMS2_k127_1091815_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1080.0
MMS2_k127_1091815_1 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 2.852e-205 659.0
MMS2_k127_1091815_2 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000000000000001018 241.0
MMS2_k127_1130294_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 9.198e-320 983.0
MMS2_k127_1130294_1 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000001614 185.0
MMS2_k127_1130294_2 Protein of unknown function, DUF485 - - - 0.000000000000000000137 88.0
MMS2_k127_1144880_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.831e-260 807.0
MMS2_k127_1144880_1 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 375.0
MMS2_k127_1144880_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 290.0
MMS2_k127_1144880_3 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000009629 233.0
MMS2_k127_1144880_4 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000001174 222.0
MMS2_k127_1151659_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 2.244e-273 844.0
MMS2_k127_1151659_1 FtsX-like permease family K02004 - - 2.603e-265 841.0
MMS2_k127_1151659_10 TIGRFAM nudix-type nucleoside diphosphatase, YffH AdpP family K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 317.0
MMS2_k127_1151659_11 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 295.0
MMS2_k127_1151659_12 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 293.0
MMS2_k127_1151659_13 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000003461 261.0
MMS2_k127_1151659_14 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000001556 191.0
MMS2_k127_1151659_15 - K09858 - - 0.000000000000000000000000000000000000000009905 161.0
MMS2_k127_1151659_2 Diguanylate cyclase - - - 3.588e-232 729.0
MMS2_k127_1151659_3 Protein of unknown function (DUF3419) K13622 - - 1.376e-219 687.0
MMS2_k127_1151659_4 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 550.0
MMS2_k127_1151659_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 524.0
MMS2_k127_1151659_6 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 521.0
MMS2_k127_1151659_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 514.0
MMS2_k127_1151659_8 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 485.0
MMS2_k127_1151659_9 domain, Protein K03112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 399.0
MMS2_k127_1158817_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 6.179e-301 928.0
MMS2_k127_1158817_1 Belongs to the major facilitator superfamily K03446 - - 2.294e-278 861.0
MMS2_k127_1158817_10 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 391.0
MMS2_k127_1158817_11 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 390.0
MMS2_k127_1158817_12 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 375.0
MMS2_k127_1158817_13 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 351.0
MMS2_k127_1158817_14 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 346.0
MMS2_k127_1158817_15 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 331.0
MMS2_k127_1158817_16 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 335.0
MMS2_k127_1158817_17 FolM Alternative dihydrofolate reductase 1 K13938 - 1.5.1.3,1.5.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 316.0
MMS2_k127_1158817_18 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 286.0
MMS2_k127_1158817_19 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001976 239.0
MMS2_k127_1158817_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 5.176e-236 735.0
MMS2_k127_1158817_20 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000000000000000000000000000000000000000007029 234.0
MMS2_k127_1158817_21 Protein of unknown function (DUF2628) - - - 0.00000000000000000000000000000000000000000000000000000000000000000745 230.0
MMS2_k127_1158817_22 Cold shock K03704 - - 0.0000000000000000000000000000000003824 131.0
MMS2_k127_1158817_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 2.621e-225 700.0
MMS2_k127_1158817_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 5.776e-195 615.0
MMS2_k127_1158817_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 505.0
MMS2_k127_1158817_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 484.0
MMS2_k127_1158817_7 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 484.0
MMS2_k127_1158817_8 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007416 464.0
MMS2_k127_1158817_9 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 396.0
MMS2_k127_116043_0 PFAM CheW domain protein - - - 4.392e-221 688.0
MMS2_k127_116043_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000001314 195.0
MMS2_k127_116043_3 Protein of unknown function (DUF3392) - - - 0.0000000000000000000000000000000000000000000003206 168.0
MMS2_k127_1162035_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 4.547e-287 884.0
MMS2_k127_1162035_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000008296 261.0
MMS2_k127_1188227_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 388.0
MMS2_k127_1188227_1 Flagellar hook-length control protein K02414 - - 0.0000000000000000000000000000000000000000000000000000000000422 228.0
MMS2_k127_1188227_2 flagellar export protein FliJ K02413 - - 0.00000000000000000000000000000000000000000002998 164.0
MMS2_k127_1196945_0 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.0 1202.0
MMS2_k127_1196945_1 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0 1101.0
MMS2_k127_1196945_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.027e-291 894.0
MMS2_k127_1196945_3 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 3.884e-288 888.0
MMS2_k127_1196945_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 3.61e-216 673.0
MMS2_k127_1196945_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 340.0
MMS2_k127_1196945_6 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 324.0
MMS2_k127_1196945_7 NADH dehydrogenase K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000003737 237.0
MMS2_k127_1196945_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000000001069 179.0
MMS2_k127_1198959_0 Type II IV secretion system protein K02454,K02652 - - 1.794e-207 654.0
MMS2_k127_1203125_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.75e-242 757.0
MMS2_k127_1203125_1 type I secretion outer membrane protein, TolC K12340,K12538 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 581.0
MMS2_k127_1203125_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 547.0
MMS2_k127_1203125_3 PFAM binding-protein-dependent transport systems inner membrane component K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 464.0
MMS2_k127_1203125_4 PFAM UbiA prenyltransferase K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 329.0
MMS2_k127_1203125_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 287.0
MMS2_k127_1203125_6 CYTH K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001263 265.0
MMS2_k127_1203125_7 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002337 270.0
MMS2_k127_1203125_8 PFAM L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001346 242.0
MMS2_k127_1209117_0 DegT/DnrJ/EryC1/StrS aminotransferase family K19715 - 2.6.1.109 2.967e-226 711.0
MMS2_k127_1209117_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 1.49e-200 628.0
MMS2_k127_1209117_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 440.0
MMS2_k127_1209117_3 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 413.0
MMS2_k127_1209117_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 321.0
MMS2_k127_1209117_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 312.0
MMS2_k127_1209117_6 PFAM Iron-containing alcohol dehydrogenase K19714 GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000008292 262.0
MMS2_k127_1209117_7 Cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006186 239.0
MMS2_k127_1209707_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.184e-288 888.0
MMS2_k127_1209707_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.745e-233 732.0
MMS2_k127_1209707_2 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 572.0
MMS2_k127_1209707_3 CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 438.0
MMS2_k127_1209707_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 347.0
MMS2_k127_1209707_5 general secretion pathway protein K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 306.0
MMS2_k127_1209707_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001189 253.0
MMS2_k127_1209707_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000876 257.0
MMS2_k127_1209707_8 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000000000000007524 213.0
MMS2_k127_1209707_9 - - - - 0.0000000000000000000000000000000000000000000000000008283 186.0
MMS2_k127_1220954_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.069e-245 769.0
MMS2_k127_1220954_1 Carboxyltransferase domain, subdomain A and B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 520.0
MMS2_k127_1220954_2 (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 423.0
MMS2_k127_1220954_3 Allophanate hydrolase subunit 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 351.0
MMS2_k127_1220954_4 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001127 267.0
MMS2_k127_1220954_5 Lysine methyltransferase - - - 0.00000001525 57.0
MMS2_k127_1226305_0 ATP-dependent helicase K03578 - 3.6.4.13 0.0 1301.0
MMS2_k127_1253249_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.719e-203 633.0
MMS2_k127_1253249_1 peptidase - - - 4.888e-201 633.0
MMS2_k127_1253249_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 419.0
MMS2_k127_1253249_3 sulfur carrier activity K04085 - - 0.00000000000000000000001044 102.0
MMS2_k127_1258767_0 Amino Acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 574.0
MMS2_k127_1258767_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 380.0
MMS2_k127_1258767_2 FeoC like transcriptional regulator - - - 0.00000000000000000000000000000000000057 141.0
MMS2_k127_1258767_3 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000000006494 134.0
MMS2_k127_1258767_4 ATP-dependent helicase K03578 - 3.6.4.13 0.00000000000159 67.0
MMS2_k127_1259354_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 6.788e-242 749.0
MMS2_k127_1259354_1 TIGRFAM 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 530.0
MMS2_k127_1259354_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000001233 242.0
MMS2_k127_126150_0 major facilitator superfamily - - - 3.141e-240 748.0
MMS2_k127_126150_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 329.0
MMS2_k127_126150_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000168 213.0
MMS2_k127_1267174_0 receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583 542.0
MMS2_k127_1267174_1 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000001185 93.0
MMS2_k127_1281574_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 385.0
MMS2_k127_1281574_1 AsnC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 281.0
MMS2_k127_1281574_2 Protein of unknown function (DUF3175) - - - 0.0000000000000000000000000000000002153 134.0
MMS2_k127_1312425_0 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 433.0
MMS2_k127_1312425_1 ABC transporter permease K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000232 252.0
MMS2_k127_1312425_2 Protein of unknown function DUF72 - - - 0.0000000001331 68.0
MMS2_k127_1325640_0 Tetratricopeptide repeat - - - 9.556e-313 972.0
MMS2_k127_1333018_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.096e-291 895.0
MMS2_k127_1333018_1 Peptidase M16C associated K06972 - - 9.057e-226 708.0
MMS2_k127_1333018_2 Cupin superfamily protein K18850 - 1.14.11.47 4.868e-211 659.0
MMS2_k127_1333018_3 H( )-stimulated, divalent metal cation uptake system K03322 GO:0000041,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015075,GO:0015077,GO:0015078,GO:0015086,GO:0015291,GO:0015292,GO:0015293,GO:0015318,GO:0015672,GO:0015684,GO:0015691,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042221,GO:0044425,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070574,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 483.0
MMS2_k127_1359565_0 von Willebrand factor (vWF) type A domain K07114 - - 1.179e-246 777.0
MMS2_k127_1359565_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 465.0
MMS2_k127_1359565_2 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 452.0
MMS2_k127_1359565_3 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 420.0
MMS2_k127_1359565_4 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 406.0
MMS2_k127_1378159_0 PFAM Aminotransferase class I and II K14261 - - 5.256e-258 796.0
MMS2_k127_1378159_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 491.0
MMS2_k127_1378159_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 432.0
MMS2_k127_1378159_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 415.0
MMS2_k127_1378159_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 380.0
MMS2_k127_1378159_5 Peptidase family M23 K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 326.0
MMS2_k127_1378159_6 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 302.0
MMS2_k127_1378159_7 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000000000000005418 183.0
MMS2_k127_1378159_8 PFAM Smr - - - 0.0000000000000000000000000000000000000000001799 165.0
MMS2_k127_1378159_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000000000142 127.0
MMS2_k127_1380305_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 5.578e-224 696.0
MMS2_k127_1380305_1 High frequency lysogenization protein hflD homolog K07153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 349.0
MMS2_k127_1380305_2 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 326.0
MMS2_k127_1387594_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 2.143e-214 670.0
MMS2_k127_1387594_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 314.0
MMS2_k127_1392318_0 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 395.0
MMS2_k127_139406_0 DHH family K07462 - - 3.555e-259 807.0
MMS2_k127_139406_1 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000000000000000000005355 234.0
MMS2_k127_1397533_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 4.375e-284 890.0
MMS2_k127_1397533_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 9.207e-213 664.0
MMS2_k127_1397533_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000003832 263.0
MMS2_k127_1397533_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000158 235.0
MMS2_k127_1411475_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 353.0
MMS2_k127_1411475_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 298.0
MMS2_k127_1414759_0 Heat shock 70 kDa protein K04043 - - 0.0 1174.0
MMS2_k127_1414759_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002319 258.0
MMS2_k127_1415378_0 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 503.0
MMS2_k127_1415378_1 Zn_pept - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 442.0
MMS2_k127_1415378_2 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 354.0
MMS2_k127_1415378_3 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000000000000008168 125.0
MMS2_k127_1416552_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 424.0
MMS2_k127_1416552_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 406.0
MMS2_k127_1416552_2 Low-potential electron donor to a number of redox enzymes K03839,K03840 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 337.0
MMS2_k127_1416552_3 N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005852 278.0
MMS2_k127_1416552_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001164 239.0
MMS2_k127_1416552_5 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000004932 209.0
MMS2_k127_1416552_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000002825 129.0
MMS2_k127_1416552_7 - - - - 0.00000000000000000000000000000001558 127.0
MMS2_k127_1421848_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1541.0
MMS2_k127_1421848_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007283 271.0
MMS2_k127_1421848_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000001503 136.0
MMS2_k127_1426140_0 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0 2140.0
MMS2_k127_1426140_1 Amidase K01457 - 3.5.1.54 2.869e-301 932.0
MMS2_k127_1426140_2 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 440.0
MMS2_k127_1426140_3 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 425.0
MMS2_k127_1457903_0 chemotaxis, protein K03406,K03776 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0016020,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0042802,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0051716,GO:0052128,GO:0052131,GO:0065007,GO:0071944 - 1.195e-240 762.0
MMS2_k127_1457903_1 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000001834 85.0
MMS2_k127_1458885_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 - 3.6.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 581.0
MMS2_k127_1459641_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1191.0
MMS2_k127_1459641_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000002552 123.0
MMS2_k127_1459641_2 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000009078 57.0
MMS2_k127_1462428_0 NMT1-like family K15576 - - 2.432e-235 728.0
MMS2_k127_1462428_1 transporter, permease K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 600.0
MMS2_k127_1462428_2 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 586.0
MMS2_k127_1462428_3 TIGRFAM Nitrate transport ATP-binding K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 508.0
MMS2_k127_1479253_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain III K01835 - 5.4.2.2 1.37e-283 874.0
MMS2_k127_1490165_0 growth of symbiont in host cell K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 354.0
MMS2_k127_1490165_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000001888 120.0
MMS2_k127_1496469_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 427.0
MMS2_k127_1496469_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 385.0
MMS2_k127_1496469_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001621 273.0
MMS2_k127_1496469_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000001247 127.0
MMS2_k127_1509865_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.039e-303 947.0
MMS2_k127_1509865_1 diguanylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 449.0
MMS2_k127_1509865_2 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 442.0
MMS2_k127_1509865_3 ABC-type multidrug transport system, ATPase component K13926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 314.0
MMS2_k127_1509865_4 Short C-terminal domain K08982 - - 0.00000000000006026 75.0
MMS2_k127_152608_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1787.0
MMS2_k127_152608_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 481.0
MMS2_k127_152608_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000001378 255.0
MMS2_k127_1538406_0 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 326.0
MMS2_k127_1538406_1 Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC K02016,K06858 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0008144,GO:0008150,GO:0015889,GO:0015893,GO:0019842,GO:0030288,GO:0030313,GO:0031419,GO:0031975,GO:0036094,GO:0042221,GO:0042493,GO:0042597,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 307.0
MMS2_k127_1538406_2 Type II secretion system (T2SS), protein N K02463 - - 0.000000000000000000000000000000000000002927 156.0
MMS2_k127_1538406_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000006812 107.0
MMS2_k127_1538406_4 - - - - 0.00000000000000000001223 93.0
MMS2_k127_1538406_5 Type II secretion system (T2SS), protein M K02462 - - 0.00000000002683 67.0
MMS2_k127_1541627_0 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 577.0
MMS2_k127_1541627_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000111 252.0
MMS2_k127_1541627_2 NlpC/P60 family K13695 - - 0.000000000000000000000000000000000000000000000005393 176.0
MMS2_k127_1556651_0 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 565.0
MMS2_k127_1556651_1 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 460.0
MMS2_k127_1556651_2 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 421.0
MMS2_k127_1563940_0 ABC transporter permease K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 394.0
MMS2_k127_1563940_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 329.0
MMS2_k127_1563940_2 toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 288.0
MMS2_k127_1563940_3 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002698 269.0
MMS2_k127_1563940_4 response to antibiotic K07122 - - 0.00000000000000000000000000003661 120.0
MMS2_k127_1575099_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1157.0
MMS2_k127_1575099_1 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 5.906e-298 924.0
MMS2_k127_1575099_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 488.0
MMS2_k127_1577524_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.0 1125.0
MMS2_k127_1577524_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 441.0
MMS2_k127_1577524_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 372.0
MMS2_k127_1582915_0 phosphate-selective porin O and P - - - 1.171e-197 620.0
MMS2_k127_1582915_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 306.0
MMS2_k127_1582915_2 AntiSigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004032 265.0
MMS2_k127_1582915_3 - K09004 - - 0.0000000000000000000000000000000000000000000000000000000000005708 213.0
MMS2_k127_1582915_4 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000002203 57.0
MMS2_k127_1590081_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0 1041.0
MMS2_k127_1590081_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 1.964e-238 742.0
MMS2_k127_1590081_2 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 548.0
MMS2_k127_1590081_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 460.0
MMS2_k127_1590081_4 PFAM CheW domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 449.0
MMS2_k127_1590081_5 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 385.0
MMS2_k127_1590081_6 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000005687 238.0
MMS2_k127_1611284_0 Involved in the TonB-independent uptake of proteins K03641 - - 2.371e-200 629.0
MMS2_k127_1611284_1 Membrane K03646 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 360.0
MMS2_k127_1611284_2 biopolymer transport protein K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000004633 223.0
MMS2_k127_1611284_3 MotA TolQ ExbB proton channel K03562 - - 0.000000000549 60.0
MMS2_k127_1614967_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 511.0
MMS2_k127_1614967_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 464.0
MMS2_k127_1614967_2 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 368.0
MMS2_k127_1614967_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 352.0
MMS2_k127_1615980_0 Outer membrane protein beta-barrel family K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 460.0
MMS2_k127_1615980_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain III K01835 - 5.4.2.2 0.000000000000000000000000000000001013 131.0
MMS2_k127_1623544_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1105.0
MMS2_k127_1623544_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 576.0
MMS2_k127_1628047_0 Na H antiporter - - - 4.713e-207 648.0
MMS2_k127_1628047_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 453.0
MMS2_k127_164429_0 PFAM aminotransferase class-III K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 4.691e-206 646.0
MMS2_k127_164429_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 549.0
MMS2_k127_164429_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 474.0
MMS2_k127_164429_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 303.0
MMS2_k127_1646426_0 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 360.0
MMS2_k127_1646426_1 Oxidoreductase NAD-binding domain K00380 - 1.8.1.2 0.00000000000000000000000000000000000000000002167 164.0
MMS2_k127_1647690_0 PFAM Peptidase family M48 K06013 - 3.4.24.84 9.673e-212 662.0
MMS2_k127_1647690_1 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 291.0
MMS2_k127_1665770_0 Putative diguanylate phosphodiesterase - - - 5.505e-221 694.0
MMS2_k127_1665770_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000001321 230.0
MMS2_k127_1669965_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794 612.0
MMS2_k127_1669965_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 372.0
MMS2_k127_1669965_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 287.0
MMS2_k127_1669965_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000001201 235.0
MMS2_k127_1669965_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000002189 111.0
MMS2_k127_1669965_5 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000003219 108.0
MMS2_k127_1670340_0 chemotaxis, protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005914 485.0
MMS2_k127_1670340_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 283.0
MMS2_k127_1670340_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000006238 94.0
MMS2_k127_1678354_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 467.0
MMS2_k127_1678354_1 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 398.0
MMS2_k127_1678354_2 Competence protein - - - 0.00000000000000000000000000000000000000000000000000000000004548 214.0
MMS2_k127_1719164_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 572.0
MMS2_k127_1719164_1 protein involved in response to NO K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 493.0
MMS2_k127_1719164_2 - - - - 0.00000000000000000000000000000000000000000000000000007192 193.0
MMS2_k127_172206_0 Belongs to the ParA family K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 471.0
MMS2_k127_172206_1 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 331.0
MMS2_k127_172206_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 322.0
MMS2_k127_172206_3 Peptidoglycan-binding protein, CsiV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 302.0
MMS2_k127_172206_4 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000000000000000000001926 154.0
MMS2_k127_1724132_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1504.0
MMS2_k127_1724132_1 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 510.0
MMS2_k127_1724132_2 efflux transmembrane transporter activity K12340,K12538 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 489.0
MMS2_k127_1724132_3 Domain of unknown function (DUF1949) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 301.0
MMS2_k127_1724132_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.00000000000000000000000000002271 118.0
MMS2_k127_1724132_5 CHAD - - - 0.000000000000000000000006346 109.0
MMS2_k127_1753059_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009549 510.0
MMS2_k127_1753059_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 410.0
MMS2_k127_1753059_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 323.0
MMS2_k127_1753059_3 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000000000000002204 149.0
MMS2_k127_1761445_0 Sodium Bile acid symporter family K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 362.0
MMS2_k127_1761445_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 355.0
MMS2_k127_1761445_2 Belongs to the SlyX family K03745 - - 0.0000000003779 60.0
MMS2_k127_1761445_3 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000002909 51.0
MMS2_k127_1769383_0 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 512.0
MMS2_k127_1774793_0 Domain of unknown function (DUF4395) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 438.0
MMS2_k127_1774793_1 ZIP Zinc transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 362.0
MMS2_k127_1774793_2 Uncharacterized protein conserved in bacteria (DUF2058) K09912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 308.0
MMS2_k127_1774793_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 298.0
MMS2_k127_1774793_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002065 228.0
MMS2_k127_1774793_5 Permeases of the drug metabolite transporter (DMT) superfamily - GO:0000099,GO:0000101,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:1901682,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000001047 199.0
MMS2_k127_1774793_6 - - - - 0.00000000000000000000000000000000000000000000214 171.0
MMS2_k127_1774793_7 - - - - 0.00000000000000000000000000000000000000000002399 162.0
MMS2_k127_1775763_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 416.0
MMS2_k127_1775763_1 Type III secretion system lipoprotein chaperone (YscW) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003671 239.0
MMS2_k127_1775763_2 response to heat K03668 - - 0.00000000000000000000000000005805 121.0
MMS2_k127_1775763_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000006933 77.0
MMS2_k127_1782841_0 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.0 1386.0
MMS2_k127_1782841_1 FixH - - - 0.000000000000000000000004965 101.0
MMS2_k127_1782841_2 Cytochrome oxidase maturation protein - - - 0.0000000000000000004776 89.0
MMS2_k127_1800091_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 525.0
MMS2_k127_1800091_1 Low molecular weight phosphatase family - - - 0.00000000002265 64.0
MMS2_k127_1810421_0 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 476.0
MMS2_k127_1810421_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002564 260.0
MMS2_k127_1810421_2 Cytidylyltransferase K00983,K18431 - 2.7.7.43,2.7.7.82 0.0000000000000000000000000000000000000000000000000000000000000000001947 237.0
MMS2_k127_1820820_0 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 361.0
MMS2_k127_1820820_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 289.0
MMS2_k127_1823055_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 534.0
MMS2_k127_1823055_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000006532 221.0
MMS2_k127_1823055_2 biopolymer transport protein K03559 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000005628 163.0
MMS2_k127_1823055_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000002439 151.0
MMS2_k127_1833260_0 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 511.0
MMS2_k127_1833260_1 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 314.0
MMS2_k127_1840294_0 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17229 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.8.2.3 2.556e-215 672.0
MMS2_k127_1840294_1 PFAM Cytochrome C K17230 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000159 181.0
MMS2_k127_1840294_2 PFAM Type II secretion system protein E K02670 - - 0.000000000000000002267 84.0
MMS2_k127_1840860_0 FAD linked oxidases, C-terminal domain - - - 2.836e-273 844.0
MMS2_k127_1840860_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 7.367e-232 719.0
MMS2_k127_1840860_2 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 554.0
MMS2_k127_1840860_3 Cysteine-rich domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 554.0
MMS2_k127_1840860_4 - - - - 0.000000009545 59.0
MMS2_k127_184466_0 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 446.0
MMS2_k127_184466_1 TIGRFAM urea ABC transporter, ATP-binding protein UrtE K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 419.0
MMS2_k127_184466_2 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003806 264.0
MMS2_k127_184466_3 branched-chain amino acid transport system, permease component K11961 - - 0.0000000000000000000000000000000000000000000000000000006071 194.0
MMS2_k127_1847440_0 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 570.0
MMS2_k127_1847440_1 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 520.0
MMS2_k127_1847440_2 Uncharacterized protein domain (DUF2202) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 318.0
MMS2_k127_1847440_3 Nitrite-sensitive transcriptional repressor NsrR K13771 - - 0.000000000000000000000000000000000000000000000000000000678 198.0
MMS2_k127_1847440_4 NikR C terminal nickel binding domain K07722 - - 0.0000000000000000000000000001853 118.0
MMS2_k127_1851533_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0 1123.0
MMS2_k127_1851533_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0 1032.0
MMS2_k127_1851533_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.031e-280 867.0
MMS2_k127_1851533_3 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 374.0
MMS2_k127_1851533_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 322.0
MMS2_k127_1851533_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000003811 241.0
MMS2_k127_186512_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.22e-314 966.0
MMS2_k127_186512_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 508.0
MMS2_k127_186512_2 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000003886 242.0
MMS2_k127_186512_3 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002068 240.0
MMS2_k127_186512_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000000000000000002051 159.0
MMS2_k127_186512_5 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000003301 72.0
MMS2_k127_1890134_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5e-324 996.0
MMS2_k127_1890134_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 604.0
MMS2_k127_1890134_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 357.0
MMS2_k127_19010_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 345.0
MMS2_k127_19010_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 327.0
MMS2_k127_1923655_0 Amino acid kinase family K00928 - 2.7.2.4 1.664e-295 909.0
MMS2_k127_1923655_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 428.0
MMS2_k127_1923655_2 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000001838 251.0
MMS2_k127_1923655_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.000001333 49.0
MMS2_k127_1944612_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 391.0
MMS2_k127_1944612_1 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000047 259.0
MMS2_k127_1944612_2 Prokaryotic glutathione synthetase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003072 224.0
MMS2_k127_1944612_4 Chromate K07240 - - 0.000000000000000000000007467 102.0
MMS2_k127_1971432_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 1.049e-205 641.0
MMS2_k127_1971432_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 387.0
MMS2_k127_1971432_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 297.0
MMS2_k127_1971432_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001084 270.0
MMS2_k127_1971432_4 Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000001847 217.0
MMS2_k127_1971432_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.00000000000000000000000000000000000000001488 157.0
MMS2_k127_1971432_6 ChaB K06197 - - 0.0000000000000000000000000000001797 126.0
MMS2_k127_1971432_7 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000007644 83.0
MMS2_k127_2021703_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 4.596e-246 762.0
MMS2_k127_2021703_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 393.0
MMS2_k127_2021703_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 387.0
MMS2_k127_2021703_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000001309 103.0
MMS2_k127_2025540_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.901e-309 953.0
MMS2_k127_2025540_1 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 345.0
MMS2_k127_2025540_2 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001112 281.0
MMS2_k127_2033959_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.0 1368.0
MMS2_k127_2033959_1 Serine dehydratase beta chain K01752 - 4.3.1.17 8.879e-231 721.0
MMS2_k127_2033959_2 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 4.234e-216 674.0
MMS2_k127_2033959_3 Permeases of the drug metabolite transporter (DMT) superfamily - GO:0000099,GO:0000101,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:1901682,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 511.0
MMS2_k127_2033959_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 499.0
MMS2_k127_2033959_5 Repeat of Unknown Function (DUF347) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 398.0
MMS2_k127_2033959_6 Protein of unknown function (DUF808) K09781 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 350.0
MMS2_k127_2033959_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000004143 162.0
MMS2_k127_2036766_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 2.971e-226 709.0
MMS2_k127_2036766_1 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000006239 99.0
MMS2_k127_2039616_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1330.0
MMS2_k127_2039616_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008399 508.0
MMS2_k127_2039616_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 503.0
MMS2_k127_2039616_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 304.0
MMS2_k127_2039616_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000002322 182.0
MMS2_k127_2068648_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 550.0
MMS2_k127_2068648_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 364.0
MMS2_k127_207109_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.612e-200 627.0
MMS2_k127_210301_0 Bacterial extracellular solute-binding protein K02064 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 379.0
MMS2_k127_210301_1 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.00000000000000000000000000000000000000005269 157.0
MMS2_k127_210644_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.34e-304 936.0
MMS2_k127_210644_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 522.0
MMS2_k127_210644_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 495.0
MMS2_k127_210644_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 407.0
MMS2_k127_210644_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000004838 129.0
MMS2_k127_210843_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 406.0
MMS2_k127_210843_1 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 402.0
MMS2_k127_210843_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001759 281.0
MMS2_k127_210843_3 YcgL domain K09902 - - 0.0000000000000000000000000000000000000000009675 160.0
MMS2_k127_210843_4 Protein of unknown function (DUF2892) - - - 0.000000000000000001863 88.0
MMS2_k127_2110856_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 476.0
MMS2_k127_2110856_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001439 232.0
MMS2_k127_2110856_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000001024 142.0
MMS2_k127_2111083_0 branched-chain amino acid transport system, permease component K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 507.0
MMS2_k127_2111083_1 urea ABC transporter, permease protein UrtB K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 369.0
MMS2_k127_2119900_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002111 253.0
MMS2_k127_2119900_1 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000001854 145.0
MMS2_k127_2147272_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 394.0
MMS2_k127_2147272_1 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 303.0
MMS2_k127_2147643_0 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 385.0
MMS2_k127_2147643_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000005096 81.0
MMS2_k127_2150720_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1782.0
MMS2_k127_2150720_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 8.803e-305 940.0
MMS2_k127_2150720_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 4.059e-259 802.0
MMS2_k127_2150720_3 PFAM CBS domain - - - 2.248e-214 670.0
MMS2_k127_2150720_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 8.549e-208 653.0
MMS2_k127_2150720_5 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 415.0
MMS2_k127_2150720_6 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 354.0
MMS2_k127_2150720_7 NUDIX domain K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 322.0
MMS2_k127_2151213_0 PFAM MoeZ MoeB domain K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 401.0
MMS2_k127_2151213_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 288.0
MMS2_k127_217744_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 372.0
MMS2_k127_217744_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 332.0
MMS2_k127_217744_2 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000000000000000003317 151.0
MMS2_k127_217744_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000038 108.0
MMS2_k127_2193482_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1317.0
MMS2_k127_219758_0 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 478.0
MMS2_k127_219758_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 331.0
MMS2_k127_219758_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003479 270.0
MMS2_k127_219758_3 Hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002734 248.0
MMS2_k127_2205083_0 Permease YjgP YjgQ K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 512.0
MMS2_k127_2214322_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 511.0
MMS2_k127_2214322_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001945 276.0
MMS2_k127_226573_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 3.765e-208 666.0
MMS2_k127_226573_1 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000001072 123.0
MMS2_k127_2268363_0 Peptidylprolyl isomerase K03770 - 5.2.1.8 1.734e-290 903.0
MMS2_k127_2268363_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.274e-259 803.0
MMS2_k127_2268363_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 601.0
MMS2_k127_2268363_3 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 338.0
MMS2_k127_2268363_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000003227 194.0
MMS2_k127_2268363_5 Protein of unknown function (DUF861) K06995 - - 0.00000000000000000000000000000000000000000953 158.0
MMS2_k127_2268363_6 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000000004097 91.0
MMS2_k127_2268363_7 High frequency lysogenization protein hflD homolog K07153 - - 0.000000000000009732 74.0
MMS2_k127_2289677_0 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 386.0
MMS2_k127_2289677_1 PFAM Haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 382.0
MMS2_k127_2289677_2 short-chain dehydrogenase reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 349.0
MMS2_k127_2299177_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 610.0
MMS2_k127_2299177_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000773 488.0
MMS2_k127_2299177_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 430.0
MMS2_k127_2299177_3 FliG C-terminal domain K02410 - - 0.00000000000000000000000000000000000000000000000000000007677 198.0
MMS2_k127_2299177_4 FliG C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000248 197.0
MMS2_k127_2299177_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000002265 166.0
MMS2_k127_230294_0 Belongs to the UPF0061 (SELO) family - - - 1.642e-257 799.0
MMS2_k127_230294_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005907 239.0
MMS2_k127_230294_2 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000001082 96.0
MMS2_k127_2318980_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 527.0
MMS2_k127_2318980_1 Low molecular weight phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002292 241.0
MMS2_k127_2318980_2 Thioredoxin domain - - - 0.00000000000000000000000000000007862 126.0
MMS2_k127_2337464_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 574.0
MMS2_k127_2337464_1 Protein conserved in bacteria - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 300.0
MMS2_k127_2337464_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003939 259.0
MMS2_k127_235147_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1668.0
MMS2_k127_235147_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 424.0
MMS2_k127_235147_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 389.0
MMS2_k127_235147_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 363.0
MMS2_k127_235147_4 Belongs to the UPF0260 family K09160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001925 249.0
MMS2_k127_235147_5 Domain of unknown function DUF302 K12308 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000005445 206.0
MMS2_k127_235147_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000001192 202.0
MMS2_k127_2364265_0 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 567.0
MMS2_k127_2364265_1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000005436 226.0
MMS2_k127_2364265_2 - - - - 0.0000000000000000000000000000000000000000000000000000006559 198.0
MMS2_k127_236747_0 Sulfate permease family K03321 - - 1.472e-278 863.0
MMS2_k127_236747_1 major facilitator superfamily K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 577.0
MMS2_k127_236747_2 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000005976 255.0
MMS2_k127_236747_3 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000000000003907 188.0
MMS2_k127_236747_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000004363 158.0
MMS2_k127_2370101_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.315e-298 919.0
MMS2_k127_2370101_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 514.0
MMS2_k127_2374654_0 Ammonium Transporter Family K03320 - - 7.924e-232 720.0
MMS2_k127_2374654_1 Belongs to the peptidase S16 family K04770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007787 266.0
MMS2_k127_2404908_0 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 436.0
MMS2_k127_2404908_1 flagellar hook-associated protein K02396 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 354.0
MMS2_k127_2404908_2 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 0.00000000000000000000000000000000000000000000000000000000000000000009038 231.0
MMS2_k127_2404908_3 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 0.0000000000000000000000000000000000000000002359 168.0
MMS2_k127_2409033_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 604.0
MMS2_k127_2409033_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 593.0
MMS2_k127_2409033_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 514.0
MMS2_k127_2409033_3 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 327.0
MMS2_k127_2409033_4 Maf-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006485 265.0
MMS2_k127_2409033_5 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000114 249.0
MMS2_k127_2409033_6 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000003006 111.0
MMS2_k127_2422711_0 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 415.0
MMS2_k127_2422711_1 Domain of unknown function (DUF4395) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 388.0
MMS2_k127_2422711_2 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 340.0
MMS2_k127_2422711_3 - - - - 0.00000000000000000000000000000000001227 137.0
MMS2_k127_2422711_4 SNARE associated Golgi protein - - - 0.00000000000000009005 81.0
MMS2_k127_2426460_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 9.327e-264 812.0
MMS2_k127_2426460_1 O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 372.0
MMS2_k127_2426460_2 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 315.0
MMS2_k127_2426460_3 ATP dependent DNA ligase domain K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000001395 118.0
MMS2_k127_2426852_0 dUTPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 349.0
MMS2_k127_2426852_1 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.000000000000000000000000001421 112.0
MMS2_k127_2426852_2 Acetyltransferase (GNAT) domain - - - 0.0000000114 57.0
MMS2_k127_2456492_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 562.0
MMS2_k127_2456492_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 520.0
MMS2_k127_2456492_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002488 269.0
MMS2_k127_2456492_3 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000000000003679 201.0
MMS2_k127_2467067_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 337.0
MMS2_k127_2467067_1 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000001271 223.0
MMS2_k127_2467136_0 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 466.0
MMS2_k127_2467136_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000002993 177.0
MMS2_k127_2469134_0 Acetyltransferase (GNAT) domain - - - 9.793e-229 711.0
MMS2_k127_2469134_2 2OG-Fe(II) oxygenase K07394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 323.0
MMS2_k127_2469134_3 cell redox homeostasis K12057 - - 0.00000000000000000000000000000000000000000000000000397 181.0
MMS2_k127_2474150_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.102e-195 612.0
MMS2_k127_2474150_1 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 439.0
MMS2_k127_2475628_0 M61 glycyl aminopeptidase - - - 2.41e-276 862.0
MMS2_k127_2475628_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.14e-257 799.0
MMS2_k127_2475628_2 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 500.0
MMS2_k127_2475628_3 Voltage-dependent anion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 487.0
MMS2_k127_2475628_4 C4-dicarboxylate transporter malic acid transport protein K03304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 355.0
MMS2_k127_2475628_5 - - - - 0.00000005197 55.0
MMS2_k127_2475628_6 - - - - 0.0000003478 55.0
MMS2_k127_2516385_0 nitrogen regulation protein NR(I) K07712 - - 2.852e-239 741.0
MMS2_k127_2516385_1 - - - - 0.000000000000000000000000000000000000000000000003328 178.0
MMS2_k127_2520164_0 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 353.0
MMS2_k127_2520164_1 Thioredoxin-like - - - 0.00000000000002464 77.0
MMS2_k127_2520857_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 602.0
MMS2_k127_2520857_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 285.0
MMS2_k127_2520857_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000009674 214.0
MMS2_k127_2524156_0 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 2.485e-230 717.0
MMS2_k127_2524156_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 598.0
MMS2_k127_2524156_2 Flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009035 321.0
MMS2_k127_2524156_3 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000005198 90.0
MMS2_k127_2524625_0 Carbohydrate kinase, FGGY K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 477.0
MMS2_k127_2524625_1 PFAM Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001248 261.0
MMS2_k127_2539510_0 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 328.0
MMS2_k127_2539510_1 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005241 268.0
MMS2_k127_2539510_2 EXOIII K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001831 271.0
MMS2_k127_2539510_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000004795 167.0
MMS2_k127_2590481_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001782 283.0
MMS2_k127_2590481_1 antisigma factor binding K04749 - - 0.0000000000000000000000000000000000003327 142.0
MMS2_k127_2598229_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 488.0
MMS2_k127_2598229_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 474.0
MMS2_k127_2598229_2 - K09004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004839 250.0
MMS2_k127_2598229_3 RF-1 domain K15034 - - 0.000000000000000008526 83.0
MMS2_k127_2599688_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.748e-235 734.0
MMS2_k127_2599688_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 6.499e-221 687.0
MMS2_k127_2599688_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 454.0
MMS2_k127_2599688_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000005951 216.0
MMS2_k127_2599688_4 methylated-DNA-[protein]-cysteine S-methyltransferase activity K00567 - 2.1.1.63 0.000000000000000000000000000000000001045 141.0
MMS2_k127_2621129_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1260.0
MMS2_k127_2621129_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1186.0
MMS2_k127_2621129_2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 319.0
MMS2_k127_2621129_3 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 308.0
MMS2_k127_2621129_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 295.0
MMS2_k127_2621129_6 Heavy-metal-associated domain K07213 - - 0.000000000000000000000000003545 114.0
MMS2_k127_263511_0 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 469.0
MMS2_k127_263511_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001899 278.0
MMS2_k127_263511_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000007876 187.0
MMS2_k127_263511_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000003538 186.0
MMS2_k127_2679137_0 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 424.0
MMS2_k127_2679137_1 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005569 252.0
MMS2_k127_2679137_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000003543 237.0
MMS2_k127_2680214_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 3.585e-209 651.0
MMS2_k127_2680214_1 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 441.0
MMS2_k127_2680214_2 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 312.0
MMS2_k127_2680214_3 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000003087 70.0
MMS2_k127_2693849_0 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 574.0
MMS2_k127_2693849_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 529.0
MMS2_k127_2693849_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 338.0
MMS2_k127_2693849_3 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000001446 153.0
MMS2_k127_2694237_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 588.0
MMS2_k127_2694237_1 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 423.0
MMS2_k127_2694237_2 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001715 250.0
MMS2_k127_2711325_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.569e-252 785.0
MMS2_k127_2711325_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 1.18e-233 734.0
MMS2_k127_2711325_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 600.0
MMS2_k127_2711325_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 527.0
MMS2_k127_2711325_4 - - - - 0.000000000000000000000000000000000000000000000000003827 184.0
MMS2_k127_2711325_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000001221 168.0
MMS2_k127_2711325_6 arsenate reductase K00537 - 1.20.4.1 0.000000000000000000000000000000000000000001819 159.0
MMS2_k127_2711325_7 Gentisate 1,2-dioxygenase - - - 0.0000000000000000000000000000000000004408 141.0
MMS2_k127_2711325_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000000001365 113.0
MMS2_k127_2717345_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 5.054e-309 951.0
MMS2_k127_2717345_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 550.0
MMS2_k127_2717345_2 PFAM CobW HypB UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 369.0
MMS2_k127_2717345_3 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002571 272.0
MMS2_k127_2717345_4 Malate quinone- oxidoreductase K00116 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.5.4 0.00000000000000004905 82.0
MMS2_k127_2726118_0 COG3156 Type II secretory pathway component PulK K02460 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001009 259.0
MMS2_k127_2726118_1 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000000000000000003471 193.0
MMS2_k127_2726118_2 General secretion pathway protein J K02459 - - 0.0000000000000000000000000000000000000000000000003762 181.0
MMS2_k127_2726118_3 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.0004631 45.0
MMS2_k127_2742194_0 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 8.084e-201 625.0
MMS2_k127_2742194_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 457.0
MMS2_k127_2746720_0 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 404.0
MMS2_k127_2746720_1 homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000937 183.0
MMS2_k127_2746720_2 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000003542 134.0
MMS2_k127_2746720_4 Protein of unknown function (DUF2846) - - - 0.000000414 58.0
MMS2_k127_2746720_5 Phenazine biosynthesis-like protein - - - 0.0001088 45.0
MMS2_k127_2748133_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 604.0
MMS2_k127_2748133_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 312.0
MMS2_k127_2748133_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 288.0
MMS2_k127_2752798_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 453.0
MMS2_k127_2752798_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000001897 232.0
MMS2_k127_2752798_2 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000423 194.0
MMS2_k127_2756345_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1118.0
MMS2_k127_2756345_1 Aminotransferase K00812 - 2.6.1.1 4.339e-197 616.0
MMS2_k127_2756762_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 1.322e-234 731.0
MMS2_k127_2756762_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 1.11e-228 711.0
MMS2_k127_2756762_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 474.0
MMS2_k127_2756762_3 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 350.0
MMS2_k127_2756762_5 YGGT family K02221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 299.0
MMS2_k127_2756762_6 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002001 274.0
MMS2_k127_2756762_7 - - - - 0.000000000000000000000000000000000000000000000000000001972 194.0
MMS2_k127_2756762_8 - - - - 0.00000000000000001245 85.0
MMS2_k127_2756996_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 9.48e-205 641.0
MMS2_k127_2756996_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 612.0
MMS2_k127_2756996_2 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001478 250.0
MMS2_k127_2757888_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 5.164e-204 643.0
MMS2_k127_2757888_1 Esterase-like activity of phytase K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008813 280.0
MMS2_k127_2780044_0 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 409.0
MMS2_k127_2780044_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 281.0
MMS2_k127_2780044_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000002309 123.0
MMS2_k127_2784928_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1239.0
MMS2_k127_2809026_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1257.0
MMS2_k127_2809026_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 603.0
MMS2_k127_2809026_2 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 422.0
MMS2_k127_2809026_3 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000002535 244.0
MMS2_k127_2809026_4 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000003511 145.0
MMS2_k127_2818375_0 Belongs to the GPI family K01810 - 5.3.1.9 7.512e-303 933.0
MMS2_k127_2818375_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 541.0
MMS2_k127_2818375_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000002564 150.0
MMS2_k127_2818375_3 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000004728 147.0
MMS2_k127_2827360_0 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000462 257.0
MMS2_k127_2827360_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001902 249.0
MMS2_k127_2827360_2 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues - - - 0.0000000000000000000000000000000000000000000000000000001389 201.0
MMS2_k127_2827360_5 PFAM FecR protein - - - 0.0000000000007462 70.0
MMS2_k127_2846836_0 ABC transporter K13926 - - 2.542e-263 821.0
MMS2_k127_2846836_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 413.0
MMS2_k127_2846836_2 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000001614 185.0
MMS2_k127_2850983_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 558.0
MMS2_k127_2850983_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 487.0
MMS2_k127_2850983_2 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001559 276.0
MMS2_k127_2854508_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.5e-323 997.0
MMS2_k127_2854508_1 Efflux transporter, RND family, MFP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 484.0
MMS2_k127_2866609_0 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 422.0
MMS2_k127_2889052_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 548.0
MMS2_k127_2889052_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 413.0
MMS2_k127_2892342_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 498.0
MMS2_k127_2892342_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007865 411.0
MMS2_k127_2892342_2 Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 285.0
MMS2_k127_2892342_3 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000000000000000000000000000000000000000209 213.0
MMS2_k127_2892342_4 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000001103 172.0
MMS2_k127_2892342_5 Iron-storage protein K02217 - 1.16.3.2 0.000000000003484 67.0
MMS2_k127_2896952_0 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 413.0
MMS2_k127_2898387_0 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 570.0
MMS2_k127_2898387_1 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 287.0
MMS2_k127_2898387_2 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002211 260.0
MMS2_k127_2904369_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1008.0
MMS2_k127_2904369_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 404.0
MMS2_k127_293800_0 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 310.0
MMS2_k127_293800_1 Belongs to the peptidase S24 family K03503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 302.0
MMS2_k127_293800_2 PilZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 284.0
MMS2_k127_293800_3 Domain of unknown function (DUF4113) - - - 0.00000000000000000000000000000000000000000000000000000000002196 209.0
MMS2_k127_293800_5 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.0000000000000000000004727 98.0
MMS2_k127_2940128_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.642e-227 711.0
MMS2_k127_2946305_0 Two component signalling adaptor domain K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000629 533.0
MMS2_k127_2946305_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006401 276.0
MMS2_k127_2965023_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 419.0
MMS2_k127_2965023_1 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 314.0
MMS2_k127_29804_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 391.0
MMS2_k127_2983662_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K00533,K18006 - 1.12.1.2,1.12.7.2 0.0 1316.0
MMS2_k127_2983662_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 3.819e-205 641.0
MMS2_k127_2983662_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 599.0
MMS2_k127_2983662_3 PFAM NADH flavin oxidoreductase NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 454.0
MMS2_k127_2983662_4 Nitroreductase family K10679 - 1.5.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 345.0
MMS2_k127_2983662_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000001162 179.0
MMS2_k127_2983662_6 - - - - 0.0000000000000000000000000000000000000000000008118 168.0
MMS2_k127_2983662_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000002836 118.0
MMS2_k127_2993504_0 TonB dependent receptor - - - 2.531e-206 662.0
MMS2_k127_2993504_1 Right handed beta helix region - - - 0.00000000000000000000000000000000000001286 154.0
MMS2_k127_2993504_2 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000001559 65.0
MMS2_k127_2994103_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.12e-301 930.0
MMS2_k127_2994103_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 9.977e-258 799.0
MMS2_k127_2994103_10 Putative FMN-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001376 214.0
MMS2_k127_2994103_13 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000000000000000000001871 130.0
MMS2_k127_2994103_14 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000003636 122.0
MMS2_k127_2994103_2 Sodium:alanine symporter family K03310 - - 1.04e-253 786.0
MMS2_k127_2994103_3 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 4.993e-198 623.0
MMS2_k127_2994103_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 603.0
MMS2_k127_2994103_5 permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 473.0
MMS2_k127_2994103_6 Thioredoxin K03671,K05838 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0008150,GO:0008152,GO:0009987,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0061077 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 428.0
MMS2_k127_2994103_7 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008902 381.0
MMS2_k127_2994103_8 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 327.0
MMS2_k127_2994103_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000000000000000000000000000000000000000000006686 228.0
MMS2_k127_3008182_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 572.0
MMS2_k127_3008182_1 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 391.0
MMS2_k127_3008182_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000000001198 195.0
MMS2_k127_3013074_0 Domain of unknown function (DUF3400) - - - 0.0 1943.0
MMS2_k127_3013074_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.31e-273 845.0
MMS2_k127_301720_0 Major Facilitator Superfamily - - - 1.017e-207 653.0
MMS2_k127_301720_1 DNA RNA non-specific endonuclease K01173 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 441.0
MMS2_k127_301720_2 Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs K06219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 420.0
MMS2_k127_301720_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 309.0
MMS2_k127_301720_4 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001365 275.0
MMS2_k127_301720_6 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 0.0003504 43.0
MMS2_k127_3020732_0 Bacterial transcription activator, effector binding domain K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 396.0
MMS2_k127_3020732_1 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 284.0
MMS2_k127_3020732_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000007285 218.0
MMS2_k127_3031152_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 433.0
MMS2_k127_3031152_1 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 305.0
MMS2_k127_3031152_2 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000008315 169.0
MMS2_k127_3031152_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000001297 151.0
MMS2_k127_3040940_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 614.0
MMS2_k127_3040940_1 pfam ammecr1 K09141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002095 259.0
MMS2_k127_3040940_2 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001291 242.0
MMS2_k127_3040940_3 belongs to the CobB CobQ family K13788 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000001977 207.0
MMS2_k127_3041909_0 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 329.0
MMS2_k127_3041909_1 Sulphur transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 291.0
MMS2_k127_3041909_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000001444 198.0
MMS2_k127_3041909_3 cytochrome - - - 0.00000000000000000000000000000000000000000000000002561 180.0
MMS2_k127_3041909_4 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000005076 171.0
MMS2_k127_3043102_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 7.776e-236 735.0
MMS2_k127_3043102_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 454.0
MMS2_k127_3043102_2 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000003988 122.0
MMS2_k127_3052719_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 8.147e-219 682.0
MMS2_k127_3052719_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 1.368e-194 612.0
MMS2_k127_3052719_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits K01899 - 6.2.1.4,6.2.1.5 0.0000000003991 60.0
MMS2_k127_3088158_0 Flagellar hook protein FlgE K02390 - - 2.877e-243 761.0
MMS2_k127_3088158_1 flagellar basal-body rod protein FlgG K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 455.0
MMS2_k127_3088158_2 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 422.0
MMS2_k127_3088158_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002448 250.0
MMS2_k127_3101332_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.7e-296 913.0
MMS2_k127_3101332_1 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 344.0
MMS2_k127_3101332_2 PFAM Cytochrome c, class I - - - 0.00000000000000000000000000000000000002534 150.0
MMS2_k127_3102591_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0 1555.0
MMS2_k127_3102591_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 9.849e-244 756.0
MMS2_k127_3102591_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 567.0
MMS2_k127_3102591_3 ACT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003025 238.0
MMS2_k127_3102591_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000000000000000000000000000000001953 234.0
MMS2_k127_3102591_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000006232 216.0
MMS2_k127_3102591_6 ATPase (AAA K07478 - - 0.0000000000000000000000000000000000000000000000000000000001317 204.0
MMS2_k127_3147553_0 phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 556.0
MMS2_k127_3147553_1 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 369.0
MMS2_k127_3147553_2 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000005882 183.0
MMS2_k127_3147553_3 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000004074 129.0
MMS2_k127_3158635_0 peptidoglycan biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 372.0
MMS2_k127_3158635_1 TIGRFAM aminopeptidase N, Escherichia coli type K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 304.0
MMS2_k127_3158635_3 LPP20 lipoprotein K09860 - - 0.00000000000000000000000000000000000000000000000000000000000000885 222.0
MMS2_k127_3168531_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005385 572.0
MMS2_k127_3168531_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 395.0
MMS2_k127_3168531_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 354.0
MMS2_k127_3168531_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000001173 99.0
MMS2_k127_3223874_0 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 384.0
MMS2_k127_3223874_1 Protein of unknown function (DUF3010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 284.0
MMS2_k127_3223874_2 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001739 258.0
MMS2_k127_3223874_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000001301 51.0
MMS2_k127_3233372_0 cell division protein K03466 - - 0.0 1218.0
MMS2_k127_3233372_1 ATPase (AAA K07478 - - 1.493e-238 742.0
MMS2_k127_3233372_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 321.0
MMS2_k127_3233372_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000403 236.0
MMS2_k127_3247292_0 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 480.0
MMS2_k127_3247292_1 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 289.0
MMS2_k127_3254027_0 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 379.0
MMS2_k127_3254027_2 - - - - 0.000000000004152 66.0
MMS2_k127_3260520_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 2.68e-238 744.0
MMS2_k127_3260520_1 TIGRFAM KamA family protein K19810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 451.0
MMS2_k127_3260520_2 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 365.0
MMS2_k127_3260520_3 class II (D, K and N) K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 347.0
MMS2_k127_3262850_0 ABC transporter transmembrane region K12541 - - 5.708e-227 709.0
MMS2_k127_3262850_1 LapD/MoxY periplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 502.0
MMS2_k127_3264038_0 PFAM Transglycosylase SLT domain K08307 - - 2.481e-272 843.0
MMS2_k127_3264038_1 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 515.0
MMS2_k127_328048_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 4.523e-300 921.0
MMS2_k127_328048_1 SbmA/BacA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 596.0
MMS2_k127_328048_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000002307 176.0
MMS2_k127_328048_3 Zinc-finger domain - - - 0.00000000000000000000000000000133 121.0
MMS2_k127_3314713_0 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 289.0
MMS2_k127_3314713_1 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 284.0
MMS2_k127_3314713_3 response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000001204 231.0
MMS2_k127_3314713_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000001129 162.0
MMS2_k127_3314713_5 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000000000000000002059 140.0
MMS2_k127_3314713_6 STAS domain - - - 0.00000000000000000000000000000004628 127.0
MMS2_k127_3318995_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.013e-249 772.0
MMS2_k127_3318995_1 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 604.0
MMS2_k127_3318995_2 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 439.0
MMS2_k127_3318995_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 360.0
MMS2_k127_3318995_4 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000001393 266.0
MMS2_k127_3318995_5 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000001451 214.0
MMS2_k127_3318995_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000007629 143.0
MMS2_k127_3332071_0 diguanylate cyclase K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 527.0
MMS2_k127_3332071_1 magnesium chelatase K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003056 244.0
MMS2_k127_3332071_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642,K03749 - - 0.0000000000000000000000000000000000000003818 154.0
MMS2_k127_3332071_3 Membrane fusogenic activity K09806 - - 0.0000000000000000000000000001258 118.0
MMS2_k127_3344696_0 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 336.0
MMS2_k127_3344696_1 - - - - 0.00000000000000000000000000000000000000000000000000001376 204.0
MMS2_k127_3348852_0 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 502.0
MMS2_k127_3348852_1 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 413.0
MMS2_k127_3348852_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 342.0
MMS2_k127_3348852_3 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001371 254.0
MMS2_k127_3352160_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1014.0
MMS2_k127_3352160_1 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004349 241.0
MMS2_k127_3352160_2 SpoIIAA-like - - - 0.000000000000000000000000000000000000000000000000000000001566 202.0
MMS2_k127_3352160_3 TraB family - - - 0.000000000000000000000004219 105.0
MMS2_k127_3355454_0 KR domain K00034 - 1.1.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 433.0
MMS2_k127_3382227_0 Diguanylate cyclase - - - 3.894e-223 701.0
MMS2_k127_3382227_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 338.0
MMS2_k127_3382227_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000003863 106.0
MMS2_k127_3403449_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 423.0
MMS2_k127_3403449_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 419.0
MMS2_k127_3403449_2 SURF4 family - - - 0.000000000000000000000000000000000000000000000000000000004465 201.0
MMS2_k127_3405394_0 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 539.0
MMS2_k127_3405394_1 Peptidase family S49 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 479.0
MMS2_k127_3405394_2 Chemoreceptor zinc-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008687 313.0
MMS2_k127_3409207_0 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 473.0
MMS2_k127_3409207_2 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 398.0
MMS2_k127_3409207_3 Belongs to the DnaA family. HdA subfamily K10763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 289.0
MMS2_k127_3409207_4 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001094 252.0
MMS2_k127_3409207_5 - - - - 0.00000000000000000000000000000000000000000000000000005768 187.0
MMS2_k127_3409207_6 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000000000001232 95.0
MMS2_k127_3414075_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.028e-270 842.0
MMS2_k127_3414075_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007047 270.0
MMS2_k127_3414305_0 flagellar hook-associated protein K02396 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 389.0
MMS2_k127_3414305_1 Rod binding protein K02395 - - 0.0000000000000000000000000000000000000000002812 162.0
MMS2_k127_3414305_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000621 56.0
MMS2_k127_3415936_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1137.0
MMS2_k127_3415936_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 599.0
MMS2_k127_3415936_2 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 344.0
MMS2_k127_3415936_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 334.0
MMS2_k127_3415936_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 314.0
MMS2_k127_3415936_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 306.0
MMS2_k127_3427095_0 TonB dependent receptor K02014 - - 0.0 1023.0
MMS2_k127_3427095_1 COG0348 Polyferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 330.0
MMS2_k127_3450994_0 aromatic hydrocarbon degradation K06076 - - 4.254e-200 628.0
MMS2_k127_3450994_1 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 469.0
MMS2_k127_3450994_2 FxsA cytoplasmic membrane protein K07113 - - 0.000000000000000000000000000000000001138 141.0
MMS2_k127_3457540_0 Type I restriction enzyme R protein N terminus (HSDR_N) K07504 - - 0.000000000000000000000000000000000000000000000000000000001005 210.0
MMS2_k127_3457540_1 PFAM FAD dependent oxidoreductase K09471 - - 0.0000000000000000002405 92.0
MMS2_k127_3488780_0 Type II/IV secretion system protein K02283 - - 2.006e-260 807.0
MMS2_k127_3488780_1 AAA domain K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 556.0
MMS2_k127_3488780_2 Type II secretion system (T2SS), protein F K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 411.0
MMS2_k127_3488780_3 Flp pilus assembly protein TadC K12511 - - 0.0000000000000000000000000009599 117.0
MMS2_k127_3489940_0 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 534.0
MMS2_k127_3489940_1 Protein of unknown function (DUF3087) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007159 240.0
MMS2_k127_3489940_2 Peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001954 231.0
MMS2_k127_3489940_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000001385 214.0
MMS2_k127_3489940_5 - K06950 - - 0.0000000008907 63.0
MMS2_k127_3507467_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0 1204.0
MMS2_k127_3507467_1 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009704 590.0
MMS2_k127_3507467_2 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 534.0
MMS2_k127_3507467_3 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004673 239.0
MMS2_k127_3507467_4 Protein of unknown function (DUF2798) - - - 0.000000000000000000000000000000000006417 137.0
MMS2_k127_3507467_6 Acyl-ACP thioesterase K07107 - - 0.0000000000000000000000000000004489 123.0
MMS2_k127_3512475_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1591.0
MMS2_k127_351419_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0 1057.0
MMS2_k127_351419_1 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 324.0
MMS2_k127_351419_2 UreD urease accessory protein K03190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 322.0
MMS2_k127_351419_3 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.000000000000000000000000000000000000000000000000000002693 191.0
MMS2_k127_351419_4 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.0000000000000000000000000000000000000000000000001131 178.0
MMS2_k127_351419_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000001514 106.0
MMS2_k127_3524112_0 Belongs to the CarB family K01955 - 6.3.5.5 8.802e-300 921.0
MMS2_k127_3524112_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 469.0
MMS2_k127_3524500_0 peptidase K01414 - 3.4.24.70 0.0 1129.0
MMS2_k127_3524500_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 483.0
MMS2_k127_3524500_2 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 465.0
MMS2_k127_3524500_3 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 350.0
MMS2_k127_3529254_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 390.0
MMS2_k127_3529254_1 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000000000000000000004242 193.0
MMS2_k127_3529254_2 SprA-related family - - - 0.0000000000000000000000000000000000000001883 159.0
MMS2_k127_3529254_3 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000002023 65.0
MMS2_k127_353101_0 ABC transporter K15738 - - 3.439e-305 943.0
MMS2_k127_353101_1 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 398.0
MMS2_k127_353101_2 NUDIX domain K08312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 319.0
MMS2_k127_353101_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 321.0
MMS2_k127_353101_4 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
MMS2_k127_353101_5 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001243 280.0
MMS2_k127_353101_6 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000005854 95.0
MMS2_k127_3532772_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 610.0
MMS2_k127_3532772_1 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 535.0
MMS2_k127_3532772_2 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002765 236.0
MMS2_k127_3533517_0 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 315.0
MMS2_k127_3533517_1 PFAM sodium calcium exchanger K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 314.0
MMS2_k127_3540714_0 PFAM FAD dependent oxidoreductase K00116 - 1.1.5.4 1.72e-261 808.0
MMS2_k127_3540714_1 PFAM CobW HypB UreG, nucleotide-binding domain - - - 0.00000000019 62.0
MMS2_k127_3543951_0 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001656 256.0
MMS2_k127_3543951_1 protein conserved in bacteria K11900 - - 0.000000000000000000000000000000000000004508 147.0
MMS2_k127_3543951_2 ImpA, N-terminal, type VI secretion system K11902 - - 0.000000000000000000000003924 104.0
MMS2_k127_3550563_0 Putative diguanylate phosphodiesterase - - - 0.0 1086.0
MMS2_k127_3550563_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 405.0
MMS2_k127_3550563_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 332.0
MMS2_k127_3550563_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003181 273.0
MMS2_k127_3550563_4 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000000001045 202.0
MMS2_k127_3555749_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 7.154e-255 788.0
MMS2_k127_3555749_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581,K01586 - 4.1.1.17,4.1.1.20 6.079e-248 767.0
MMS2_k127_3555749_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 552.0
MMS2_k127_3555749_3 PFAM OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001321 272.0
MMS2_k127_3555749_5 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000002266 120.0
MMS2_k127_3578816_1 energy transducer activity K03832,K07261 - - 0.00000000000000000000007774 99.0
MMS2_k127_3585356_0 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 466.0
MMS2_k127_3585356_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 408.0
MMS2_k127_3585356_10 Asparaginase, N-terminal K01424 - 3.5.1.1 0.00000005365 56.0
MMS2_k127_3585356_2 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 388.0
MMS2_k127_3585356_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 359.0
MMS2_k127_3585356_4 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 332.0
MMS2_k127_3585356_5 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 318.0
MMS2_k127_3585356_6 Peptidase S24-like K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 282.0
MMS2_k127_3585356_7 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001309 274.0
MMS2_k127_3585356_8 PFAM YCII-related K09780 - - 0.0000000000000000000000000000000000000000000006409 167.0
MMS2_k127_3585356_9 Asparaginase, N-terminal K01424 - 3.5.1.1 0.00000000000000000000000000000000000000003542 154.0
MMS2_k127_360367_0 Putative diguanylate phosphodiesterase - - - 6.317e-275 856.0
MMS2_k127_360367_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 1.379e-207 648.0
MMS2_k127_360367_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001631 276.0
MMS2_k127_360367_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000003226 100.0
MMS2_k127_3636879_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 9.654e-206 642.0
MMS2_k127_3636879_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 467.0
MMS2_k127_3636879_2 AefR-like transcriptional repressor, C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008893 242.0
MMS2_k127_3641094_0 May be involved in recombinational repair of damaged DNA K03631 - - 4.138e-245 767.0
MMS2_k127_3641094_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 548.0
MMS2_k127_3641094_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 514.0
MMS2_k127_3641094_3 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 338.0
MMS2_k127_3641094_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000004443 139.0
MMS2_k127_367033_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 1.665e-225 700.0
MMS2_k127_367033_1 HDOD domain - - - 1.444e-195 616.0
MMS2_k127_367033_2 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 403.0
MMS2_k127_367033_3 nuclease K01174 - 3.1.31.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 332.0
MMS2_k127_3671030_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2240.0
MMS2_k127_3671476_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 2.665e-242 753.0
MMS2_k127_3671476_1 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 385.0
MMS2_k127_3671476_2 Secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001207 244.0
MMS2_k127_3671476_3 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000001484 185.0
MMS2_k127_3674638_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1585.0
MMS2_k127_3674638_1 F plasmid transfer operon, TraF, protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 597.0
MMS2_k127_3674638_2 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 492.0
MMS2_k127_3674638_3 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 362.0
MMS2_k127_3674638_4 - - - - 0.000000000000000000000000000000000000000000000000000004796 194.0
MMS2_k127_3679349_0 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 449.0
MMS2_k127_3679349_1 - K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 323.0
MMS2_k127_3679349_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 305.0
MMS2_k127_3679349_3 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 303.0
MMS2_k127_3679349_4 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 287.0
MMS2_k127_3687717_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1195.0
MMS2_k127_3687717_1 TIGRFAM lytic murein transglycosylase K08305 - - 6.142e-196 617.0
MMS2_k127_3687717_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005414 246.0
MMS2_k127_3696456_0 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 466.0
MMS2_k127_3696456_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 419.0
MMS2_k127_3696456_2 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 331.0
MMS2_k127_3696456_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 319.0
MMS2_k127_3696456_4 COG3637 Opacity protein and related surface antigens - - - 0.00000000000000000000000000000000000000000000000000000000009186 210.0
MMS2_k127_3696456_5 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000009558 96.0
MMS2_k127_3705769_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 3.585e-304 935.0
MMS2_k127_3705769_1 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 455.0
MMS2_k127_3705769_2 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 332.0
MMS2_k127_3715378_0 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 284.0
MMS2_k127_3715378_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000005354 229.0
MMS2_k127_3722950_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1031.0
MMS2_k127_3722950_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 578.0
MMS2_k127_3722950_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 384.0
MMS2_k127_3722950_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000002477 149.0
MMS2_k127_3725543_0 Outer membrane efflux protein - - - 8.116e-213 669.0
MMS2_k127_3725543_1 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 423.0
MMS2_k127_3725543_2 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 326.0
MMS2_k127_3725543_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000002922 124.0
MMS2_k127_3727438_0 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 505.0
MMS2_k127_3727438_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000002528 64.0
MMS2_k127_3742815_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 586.0
MMS2_k127_3742815_1 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 552.0
MMS2_k127_3742815_2 PFAM ATPase associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 503.0
MMS2_k127_3742815_3 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006913 499.0
MMS2_k127_3742815_4 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 421.0
MMS2_k127_3742815_5 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 373.0
MMS2_k127_3742815_7 von Willebrand factor, type A K07114 - - 0.00000000000000000004177 94.0
MMS2_k127_3751383_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000005706 226.0
MMS2_k127_3751383_1 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000000000001034 175.0
MMS2_k127_3751383_2 - - - - 0.000000000000000000000000002165 114.0
MMS2_k127_3770123_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0 1051.0
MMS2_k127_3770123_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 482.0
MMS2_k127_3772006_0 Cytochrome c - - - 1.656e-226 705.0
MMS2_k127_3776113_0 Amino Acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 407.0
MMS2_k127_3776113_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 363.0
MMS2_k127_3776113_2 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007383 239.0
MMS2_k127_3776113_3 VIT family - - - 0.00000000002037 66.0
MMS2_k127_3787574_0 TonB-dependent Receptor Plug K16092 - - 1.893e-299 930.0
MMS2_k127_3787574_1 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.00000000000000000000000000000000000000001972 155.0
MMS2_k127_3787574_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000002183 127.0
MMS2_k127_3791553_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 510.0
MMS2_k127_3791553_1 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 482.0
MMS2_k127_3791553_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 306.0
MMS2_k127_3791553_3 - - - - 0.00000000004577 64.0
MMS2_k127_3791727_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 6.763e-203 635.0
MMS2_k127_3791727_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642,K03749 - - 0.000000000000000000000000000000000000000000000000000000000001249 216.0
MMS2_k127_3793283_0 PAS domain K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 542.0
MMS2_k127_3793283_1 Sigma-54 interaction domain K10941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 295.0
MMS2_k127_3795274_0 NmrA-like family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 604.0
MMS2_k127_3795274_1 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 534.0
MMS2_k127_3795274_10 Belongs to the bacterial flagellin family K02397 - - 0.000000000000000000000000000001001 121.0
MMS2_k127_3795274_2 UDP-N-acetylglucosamine 2-epimerase K01791,K18429 - 3.2.1.184,5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 529.0
MMS2_k127_3795274_3 N-acetyl sugar amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 494.0
MMS2_k127_3795274_4 NeuB family K01654,K15898,K18430 - 2.5.1.101,2.5.1.56,2.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 497.0
MMS2_k127_3795274_5 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 472.0
MMS2_k127_3795274_6 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005048 281.0
MMS2_k127_3795274_7 N-acetyl sugar amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003856 232.0
MMS2_k127_3795274_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000002713 204.0
MMS2_k127_3795274_9 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000576 159.0
MMS2_k127_3798340_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 480.0
MMS2_k127_3798340_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 470.0
MMS2_k127_3798340_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 372.0
MMS2_k127_3798340_3 imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 365.0
MMS2_k127_3798340_4 PFAM phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000001005 162.0
MMS2_k127_3798478_0 HI0933-like protein K07007 - - 2.249e-204 642.0
MMS2_k127_3798478_1 Molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 430.0
MMS2_k127_3798478_2 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243,K18284 - 3.2.2.30,3.2.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 425.0
MMS2_k127_3798478_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002725 256.0
MMS2_k127_3798478_4 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) K07173 - 4.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000003303 226.0
MMS2_k127_3801544_0 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 501.0
MMS2_k127_3801544_1 BMC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 391.0
MMS2_k127_3801544_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 338.0
MMS2_k127_3801544_5 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000005732 51.0
MMS2_k127_3811111_0 Beta-Casp domain K07576 - - 9.952e-274 845.0
MMS2_k127_3811111_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 7.359e-257 792.0
MMS2_k127_3811111_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 542.0
MMS2_k127_3811111_3 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 389.0
MMS2_k127_3811111_4 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007181 268.0
MMS2_k127_3811111_5 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008163 263.0
MMS2_k127_3811111_6 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000003859 217.0
MMS2_k127_3811111_7 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000008949 177.0
MMS2_k127_3811111_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000006254 165.0
MMS2_k127_382961_0 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 412.0
MMS2_k127_382961_1 VIT family - - - 0.000000000000000000000000000000000001138 141.0
MMS2_k127_3869072_0 Succinylglutamate desuccinylase aspartoacylase K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 583.0
MMS2_k127_3869072_1 Belongs to the RimK family K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 550.0
MMS2_k127_3869072_2 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000002111 219.0
MMS2_k127_3869072_3 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000000000000000000000001828 209.0
MMS2_k127_3879527_0 DNA helicase K03657 - 3.6.4.12 0.0 1237.0
MMS2_k127_3879527_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.979e-209 651.0
MMS2_k127_3879527_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 4.58e-201 641.0
MMS2_k127_3879527_3 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000000002181 217.0
MMS2_k127_3880282_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009736 458.0
MMS2_k127_3880282_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000001263 98.0
MMS2_k127_391807_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000124 251.0
MMS2_k127_391807_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000004106 207.0
MMS2_k127_3920210_0 Tetratricopeptide repeat - - - 6.333e-218 691.0
MMS2_k127_3920210_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 602.0
MMS2_k127_3920210_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 344.0
MMS2_k127_3920210_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 329.0
MMS2_k127_3920210_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000004381 173.0
MMS2_k127_3920210_5 - - - - 0.00000009989 53.0
MMS2_k127_3920320_0 ABC transporter transmembrane region K06148 - - 1.026e-275 852.0
MMS2_k127_3920320_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 4.935e-201 628.0
MMS2_k127_3920320_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 355.0
MMS2_k127_39354_0 glutamate--cysteine ligase K01919 - 6.3.2.2 5.254e-252 782.0
MMS2_k127_39354_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 1.006e-235 733.0
MMS2_k127_39354_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 4.648e-200 625.0
MMS2_k127_39354_3 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 586.0
MMS2_k127_39354_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 509.0
MMS2_k127_39354_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 323.0
MMS2_k127_39354_6 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 320.0
MMS2_k127_39354_7 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000000000000001066 226.0
MMS2_k127_39354_8 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.00000000000000000000000000000000000000000001116 170.0
MMS2_k127_3962343_0 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 582.0
MMS2_k127_3962343_1 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 394.0
MMS2_k127_3962343_2 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 322.0
MMS2_k127_3962343_3 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000322 170.0
MMS2_k127_3962343_4 Role in flagellar biosynthesis K02420 - - 0.000000000000000000000000000000000000000001304 157.0
MMS2_k127_3979919_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.681e-280 864.0
MMS2_k127_3979919_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.959e-215 670.0
MMS2_k127_3979919_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000001574 151.0
MMS2_k127_4005424_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 6.427e-200 625.0
MMS2_k127_4005424_1 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000001822 175.0
MMS2_k127_4010282_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 2.173e-240 747.0
MMS2_k127_4010282_1 Belongs to the EPSP synthase family. MurA subfamily K00790 - 2.5.1.7 3.674e-229 713.0
MMS2_k127_4010282_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 397.0
MMS2_k127_4010282_3 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000034 258.0
MMS2_k127_4010282_4 2 iron, 2 sulfur cluster binding K07390 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.0000000000000000000000000000005203 123.0
MMS2_k127_401090_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 6.622e-213 663.0
MMS2_k127_401090_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 559.0
MMS2_k127_401090_2 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 556.0
MMS2_k127_401090_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 389.0
MMS2_k127_401090_4 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000473 209.0
MMS2_k127_4011931_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.749e-302 931.0
MMS2_k127_4011931_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.072e-297 918.0
MMS2_k127_4011931_2 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 542.0
MMS2_k127_4011931_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 421.0
MMS2_k127_4011931_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 364.0
MMS2_k127_4011931_5 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002922 250.0
MMS2_k127_4011931_6 response to oxidative stress K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000002951 166.0
MMS2_k127_4017171_0 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 536.0
MMS2_k127_4017171_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000008523 260.0
MMS2_k127_4017171_2 Belongs to the PsiE family K13256 - - 0.00000000000000000000000000000000000000000000000000000001375 200.0
MMS2_k127_4052985_1 Thioredoxin - - - 0.00000000000000000000000000000000000000000000107 166.0
MMS2_k127_4053361_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.715e-259 800.0
MMS2_k127_4053361_1 PFAM Cytochrome C1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 361.0
MMS2_k127_4053361_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 355.0
MMS2_k127_4053361_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000004009 84.0
MMS2_k127_4072725_0 Peptidogalycan biosysnthesis/recognition K09919 - - 4.196e-201 634.0
MMS2_k127_4072725_1 HAD-superfamily subfamily IIA hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 357.0
MMS2_k127_4072725_2 Cyclin-dependent kinase inhibitor 3 (CDKN3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002088 270.0
MMS2_k127_4072725_3 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000007027 181.0
MMS2_k127_4072725_5 - - - - 0.0000000000000000000000000000000000000000682 156.0
MMS2_k127_4072725_6 Domain of unknown function (DUF4156) - - - 0.000000000000000000000000000000002336 134.0
MMS2_k127_4095868_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 - 6.2.1.1,6.2.1.17 5.266e-274 845.0
MMS2_k127_4095868_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000002002 130.0
MMS2_k127_4111178_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 395.0
MMS2_k127_4114048_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1118.0
MMS2_k127_4114048_1 growth of symbiont in host cell K07003 - - 0.0000000000000000004419 91.0
MMS2_k127_4116442_0 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 553.0
MMS2_k127_4116442_1 chemotaxis, protein K03406,K03776 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0016020,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0042802,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0051716,GO:0052128,GO:0052131,GO:0065007,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 410.0
MMS2_k127_4121787_0 Bacterial periplasmic substrate-binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 536.0
MMS2_k127_4129718_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 403.0
MMS2_k127_4129718_2 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000369 128.0
MMS2_k127_4130354_0 Belongs to the 5'-nucleotidase family K17224 - - 0.0 1261.0
MMS2_k127_4130354_1 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 294.0
MMS2_k127_4130354_2 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001111 273.0
MMS2_k127_4130354_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008266 263.0
MMS2_k127_4144402_0 Type II and III secretion system protein K02453 - - 4.487e-250 790.0
MMS2_k127_4144402_1 Type II IV secretion system protein K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008366 266.0
MMS2_k127_4144402_2 protein transport across the cell outer membrane K02452 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000000007246 67.0
MMS2_k127_4151638_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.113e-255 790.0
MMS2_k127_4151638_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 513.0
MMS2_k127_4151638_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006881 441.0
MMS2_k127_4151638_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 334.0
MMS2_k127_4151638_4 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000006408 255.0
MMS2_k127_4151638_5 nitrogen regulatory protein P-II K04752 - - 0.000000000000000000000000000000000000000000000000000000000000005614 217.0
MMS2_k127_4151638_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000002112 199.0
MMS2_k127_4151638_7 - - - - 0.00000000000000000000000009037 107.0
MMS2_k127_4153973_0 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 527.0
MMS2_k127_4153973_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 506.0
MMS2_k127_4168847_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 7.288e-210 659.0
MMS2_k127_4168847_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 470.0
MMS2_k127_4176128_0 receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 522.0
MMS2_k127_4176128_1 nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000000000000000000000000000001793 191.0
MMS2_k127_4176128_2 YKOF-related Family - - - 0.0000000000000000000000000000000000000000009501 157.0
MMS2_k127_4176839_0 molecular chaperone K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 544.0
MMS2_k127_4176839_1 Outer membrane protein beta-barrel family K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 295.0
MMS2_k127_4176839_2 PFAM HopJ type III effector protein - - - 0.0000000000000000000000000000000000000000000000009549 176.0
MMS2_k127_4176839_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000007511 89.0
MMS2_k127_4186141_0 Histidine kinase - - - 1.047e-238 743.0
MMS2_k127_4186141_1 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000001282 207.0
MMS2_k127_4189980_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.284e-314 971.0
MMS2_k127_4189980_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 531.0
MMS2_k127_4189980_2 Preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000000000001596 117.0
MMS2_k127_4192134_0 PFAM response regulator receiver K10943 - - 6.399e-208 649.0
MMS2_k127_4198261_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 330.0
MMS2_k127_4198261_1 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000002198 208.0
MMS2_k127_4209396_0 Belongs to the peptidase M16 family K07263 - - 1.686e-222 697.0
MMS2_k127_4209396_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 436.0
MMS2_k127_4209396_2 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000001066 220.0
MMS2_k127_4209396_3 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000197 138.0
MMS2_k127_4211793_0 Histidine kinase - - - 1.072e-214 677.0
MMS2_k127_4215654_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1077.0
MMS2_k127_4215654_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 499.0
MMS2_k127_4215654_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 459.0
MMS2_k127_4215654_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000000000000001985 219.0
MMS2_k127_4215654_4 Tellurite resistance protein TehB - - - 0.000000000000002055 78.0
MMS2_k127_4216387_0 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 6.112e-214 674.0
MMS2_k127_4216387_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 586.0
MMS2_k127_4216387_2 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000000000000000000000000000000000000004294 205.0
MMS2_k127_4218595_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 386.0
MMS2_k127_4218595_1 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 375.0
MMS2_k127_4218595_2 Protein of unknown function (DUF2927) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 289.0
MMS2_k127_4218595_3 TatD related DNase K03424 - - 0.0009594 44.0
MMS2_k127_4226806_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1316.0
MMS2_k127_4229282_0 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 604.0
MMS2_k127_4229282_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 364.0
MMS2_k127_4229282_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 301.0
MMS2_k127_4233049_0 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000004394 241.0
MMS2_k127_4233049_1 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000001377 231.0
MMS2_k127_4233049_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000003221 128.0
MMS2_k127_4238835_0 Belongs to the UPF0753 family K09822 - - 0.0 1347.0
MMS2_k127_4238835_1 Acetamidase/Formamidase family K01455 - 3.5.1.49 4.724e-209 649.0
MMS2_k127_4238835_2 Proton-conducting membrane transporter K05577 - 1.6.5.3 1.037e-208 654.0
MMS2_k127_4238835_3 FmdB family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000004923 171.0
MMS2_k127_4240599_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1039.0
MMS2_k127_4240599_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 1.199e-276 856.0
MMS2_k127_4240599_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000008539 204.0
MMS2_k127_4250469_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 372.0
MMS2_k127_4250469_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 314.0
MMS2_k127_4250469_2 Protein of unknown function (DUF3579) - - - 0.000000000000000000000000000000000000000000000002269 174.0
MMS2_k127_4250469_3 antisigma factor binding K04749 - - 0.00000000000000000000000000000000002063 138.0
MMS2_k127_4250469_4 queuosine biosynthesis protein QueD K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000002966 125.0
MMS2_k127_4258651_0 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.732e-298 918.0
MMS2_k127_4258651_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 458.0
MMS2_k127_4261638_0 Hydroxymethylglutaryl-coenzyme A reductase K00021 - 1.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 602.0
MMS2_k127_4261638_1 Belongs to the peptidase S8 family K12685,K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 522.0
MMS2_k127_4261638_2 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 394.0
MMS2_k127_4277986_0 Belongs to the peptidase S16 family K04770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 401.0
MMS2_k127_4277986_1 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 291.0
MMS2_k127_4277986_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000004504 179.0
MMS2_k127_4280824_0 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 462.0
MMS2_k127_4281163_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 542.0
MMS2_k127_4281163_1 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000001462 237.0
MMS2_k127_4281163_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000007792 107.0
MMS2_k127_4285219_0 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 413.0
MMS2_k127_4285219_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.000000000000000000000000000001862 122.0
MMS2_k127_4290400_0 Belongs to the glycosyl hydrolase 57 family - - - 1.259e-248 773.0
MMS2_k127_4290400_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 478.0
MMS2_k127_4292682_0 (ABC) transporter K13926 - - 2.716e-250 787.0
MMS2_k127_4292682_1 PFAM aminotransferase class-III K01845 - 5.4.3.8 4.556e-208 648.0
MMS2_k127_4292682_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 299.0
MMS2_k127_4292682_3 protein conserved in bacteria K09906 GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016705,GO:0016709,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0055114,GO:0071704,GO:0072580,GO:1901260,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008338 273.0
MMS2_k127_4307587_0 Part of a membrane complex involved in electron transport K03615 - - 3.501e-255 807.0
MMS2_k127_4307587_1 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 606.0
MMS2_k127_4307587_2 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 340.0
MMS2_k127_4307587_3 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 319.0
MMS2_k127_4307587_4 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000521 175.0
MMS2_k127_4312399_0 argininosuccinate lyase K01755 - 4.3.2.1 1.748e-275 850.0
MMS2_k127_4312399_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.017e-235 734.0
MMS2_k127_4312399_2 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000003278 233.0
MMS2_k127_4315172_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07708 - 2.7.13.3 3.695e-219 681.0
MMS2_k127_4315172_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 413.0
MMS2_k127_4315172_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 399.0
MMS2_k127_4315172_3 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 341.0
MMS2_k127_4315172_4 - - - - 0.00000000000000000000000000000000000761 137.0
MMS2_k127_4315172_5 nitrogen regulation protein NR(I) K07712 - - 0.00000000000000000000000000006801 116.0
MMS2_k127_4315172_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000003252 98.0
MMS2_k127_4315172_7 - - - - 0.00002848 47.0
MMS2_k127_4315172_8 - - - - 0.00002848 47.0
MMS2_k127_4317146_0 Diguanylate cyclase - - - 0.0 1092.0
MMS2_k127_4317146_1 Diguanylate cyclase - - - 1.265e-319 991.0
MMS2_k127_4317146_2 transporter, dctM subunit - - - 1.434e-238 743.0
MMS2_k127_4317146_3 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 527.0
MMS2_k127_4317146_4 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000306 249.0
MMS2_k127_4317146_5 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001135 246.0
MMS2_k127_4336634_0 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 498.0
MMS2_k127_4336634_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000237 282.0
MMS2_k127_4371002_0 Protein of unknown function DUF115 - - - 1.73e-315 987.0
MMS2_k127_4371002_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000003181 144.0
MMS2_k127_4371002_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.00000000000000006248 82.0
MMS2_k127_4376719_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0 1085.0
MMS2_k127_4376719_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 559.0
MMS2_k127_4376719_2 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 367.0
MMS2_k127_4376719_3 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000000000000000000000001257 220.0
MMS2_k127_4383125_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 2283.0
MMS2_k127_4383125_1 YqcI/YcgG family - - - 1.876e-204 642.0
MMS2_k127_4383125_2 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 - 2.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 403.0
MMS2_k127_4383125_3 Cache domain - - - 0.00000000000000000000000000000000000000000000000009068 179.0
MMS2_k127_4390946_0 PFAM FAD dependent oxidoreductase K00116 - 1.1.5.4 1.13e-207 647.0
MMS2_k127_4390946_1 permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 475.0
MMS2_k127_4390946_2 DNA-binding transcription factor activity K03892 - - 0.0000000000000000000000000000000002736 136.0
MMS2_k127_4390946_3 Thioredoxin domain - - - 0.00000000000000000000000000000003234 126.0
MMS2_k127_4395303_0 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 479.0
MMS2_k127_4395303_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 483.0
MMS2_k127_4395303_2 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 388.0
MMS2_k127_4395303_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000735 118.0
MMS2_k127_4395303_4 - - - - 0.0000000000000000000005181 98.0
MMS2_k127_4396206_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1036.0
MMS2_k127_4396206_1 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 1.7e-204 640.0
MMS2_k127_4396206_2 Tetrahydrodipicolinate N-succinyltransferase middle - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 587.0
MMS2_k127_4396206_3 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 485.0
MMS2_k127_4396206_4 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009605 257.0
MMS2_k127_4396206_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000000000000000000000000000000000000000000000000000002778 201.0
MMS2_k127_4396206_6 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000000000000000000000003825 195.0
MMS2_k127_4396219_0 Exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 490.0
MMS2_k127_4396219_1 Universal stress protein family K06149 - - 0.000000000000000000000000000000000000000000000000000000000000006576 219.0
MMS2_k127_4396219_2 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000008053 122.0
MMS2_k127_4396219_4 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000005824 83.0
MMS2_k127_4399414_0 Cytochrome c-type biogenesis protein Ccs1 ResB K07399 - - 0.0 1116.0
MMS2_k127_4399414_1 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 372.0
MMS2_k127_4399414_2 - - - - 0.00000000000000000000000000000000000000000000000000000002229 199.0
MMS2_k127_4399414_3 PFAM Cytochrome c assembly protein - - - 0.00000000000000000002453 91.0
MMS2_k127_4414821_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 4.205e-207 646.0
MMS2_k127_4434480_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 313.0
MMS2_k127_4434480_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000117 260.0
MMS2_k127_4445478_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 1.475e-283 877.0
MMS2_k127_4445478_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 598.0
MMS2_k127_4445478_2 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 559.0
MMS2_k127_4450502_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000002412 163.0
MMS2_k127_4450502_1 COG0500 SAM-dependent methyltransferases K15256 - - 0.00000000000000001839 83.0
MMS2_k127_446321_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 9.982e-244 757.0
MMS2_k127_446321_1 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 586.0
MMS2_k127_446321_2 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 486.0
MMS2_k127_446321_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 474.0
MMS2_k127_446321_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 345.0
MMS2_k127_446321_5 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008477 256.0
MMS2_k127_446321_6 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000000000204 153.0
MMS2_k127_446321_7 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000000000004449 94.0
MMS2_k127_4464366_0 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 593.0
MMS2_k127_4464366_1 ABC 3 transport family K02075,K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 340.0
MMS2_k127_4464366_2 ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 259.0
MMS2_k127_4487614_0 chemotaxis, protein K03406 - - 5.335e-237 747.0
MMS2_k127_4487614_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 431.0
MMS2_k127_4487614_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 334.0
MMS2_k127_4487614_3 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 321.0
MMS2_k127_4487614_4 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006243 269.0
MMS2_k127_4487614_5 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000002062 221.0
MMS2_k127_4490047_0 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 380.0
MMS2_k127_4490047_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 363.0
MMS2_k127_4490047_2 Cytochrome c - - - 0.0000000000000000000000000000000000002888 142.0
MMS2_k127_4490047_3 Glycoprotease family K14742 - - 0.000000000000005897 76.0
MMS2_k127_4494813_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.545e-314 966.0
MMS2_k127_4494813_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 8.705e-200 627.0
MMS2_k127_4494813_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 593.0
MMS2_k127_4494813_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000000009932 175.0
MMS2_k127_4494813_4 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000002219 75.0
MMS2_k127_4517627_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 3.342e-279 860.0
MMS2_k127_4517627_1 Glutaredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 470.0
MMS2_k127_4517627_2 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000001355 222.0
MMS2_k127_4517627_3 deaminase K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000000003749 202.0
MMS2_k127_4517627_4 nicotinamide mononucleotide transporter K03811 - - 0.0000000000000009667 78.0
MMS2_k127_453063_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 3.108e-208 650.0
MMS2_k127_453063_1 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 336.0
MMS2_k127_453063_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002942 271.0
MMS2_k127_4568843_0 phosphate-selective porin O and P - - - 5.121e-225 704.0
MMS2_k127_4583466_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 567.0
MMS2_k127_4583466_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 518.0
MMS2_k127_4583466_2 FMN_bind - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008639 272.0
MMS2_k127_4583466_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002968 276.0
MMS2_k127_4583466_4 - - - - 0.00000000000000000000000000000000000000000000000000000008755 199.0
MMS2_k127_4583466_5 Sulphur transport K07112 - - 0.000000000000000000000004361 103.0
MMS2_k127_4586108_0 Cation transporter/ATPase, N-terminus - - - 0.0 1381.0
MMS2_k127_4586108_1 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 578.0
MMS2_k127_4586108_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000007728 205.0
MMS2_k127_4599893_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1279.0
MMS2_k127_4599893_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 1.523e-214 675.0
MMS2_k127_4599893_2 Drug resistance transporter Bcr CflA subfamily K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 554.0
MMS2_k127_4599893_3 PFAM Glycosyl transferase, family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 425.0
MMS2_k127_4599893_4 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 382.0
MMS2_k127_4599893_5 Domain of unknown function (DUF4113) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 357.0
MMS2_k127_4599893_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.7.7.77 0.0000000000000000000000000000000000000000000000008624 181.0
MMS2_k127_4623223_0 Bacterial periplasmic substrate-binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 431.0
MMS2_k127_4623223_1 Bacterial periplasmic substrate-binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 426.0
MMS2_k127_4625022_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 518.0
MMS2_k127_4625022_1 Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 412.0
MMS2_k127_4625022_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 407.0
MMS2_k127_4625022_3 TIGRFAM molybdenum cofactor synthesis K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 342.0
MMS2_k127_4625022_4 Domain of Unknown Function (DUF748) - - - 0.000002439 51.0
MMS2_k127_4629689_0 response regulator K07679 - 2.7.13.3 0.0 1860.0
MMS2_k127_4629689_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.000000000000000000000000009749 109.0
MMS2_k127_4637277_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 492.0
MMS2_k127_4637277_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000233 190.0
MMS2_k127_4637277_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000001703 108.0
MMS2_k127_4644064_0 hydrolase, TatD K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 323.0
MMS2_k127_4644064_1 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.0000000000000000000000000000000000000000000000000003847 192.0
MMS2_k127_4663393_0 response regulator K02488 - 2.7.7.65 2.614e-230 719.0
MMS2_k127_4663393_1 Isocitrate dehydrogenase NADP-dependent, monomeric type K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 359.0
MMS2_k127_4663393_2 PhnA Zinc-Ribbon K06193 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 324.0
MMS2_k127_4683992_0 Belongs to the CarB family K01955 - 6.3.5.5 2.294e-296 911.0
MMS2_k127_4683992_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000003591 143.0
MMS2_k127_4706007_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.512e-314 964.0
MMS2_k127_4706007_1 Belongs to the GARS family K01945,K13713 - 6.3.2.6,6.3.4.13 6.64e-245 760.0
MMS2_k127_4706007_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 487.0
MMS2_k127_4706007_3 Methylates ribosomal protein L11 K02687 - - 0.0000000000000000000000000000000000000000001386 160.0
MMS2_k127_4706007_4 Late competence development protein ComFB - - - 0.00000000000000000000000000000000000005743 144.0
MMS2_k127_4706007_5 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.000000000000000000000000000000005866 129.0
MMS2_k127_4707617_0 ABC transporter - - - 7.305e-259 799.0
MMS2_k127_4707617_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 557.0
MMS2_k127_4707617_2 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005533 256.0
MMS2_k127_4719450_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.047e-318 980.0
MMS2_k127_473319_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 377.0
MMS2_k127_473319_1 PFAM MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 344.0
MMS2_k127_473319_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 313.0
MMS2_k127_473319_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001595 281.0
MMS2_k127_473319_4 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000008352 127.0
MMS2_k127_4734539_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 596.0
MMS2_k127_4734539_1 General glycosylation pathway protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 422.0
MMS2_k127_4734539_2 HAD-superfamily hydrolase, subfamily IIB K07026,K15918 - 2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 420.0
MMS2_k127_4734539_3 response regulator K07183 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008689 244.0
MMS2_k127_4734539_4 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.000000000000000000000000000002465 120.0
MMS2_k127_473557_0 polyphosphate kinase 2 K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 459.0
MMS2_k127_473557_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 309.0
MMS2_k127_473557_2 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001658 274.0
MMS2_k127_4750628_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.876e-221 691.0
MMS2_k127_4750628_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 554.0
MMS2_k127_4756974_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007226 503.0
MMS2_k127_4777969_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.322e-247 767.0
MMS2_k127_4777969_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000008405 212.0
MMS2_k127_478767_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 470.0
MMS2_k127_478767_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000375 98.0
MMS2_k127_4788103_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 332.0
MMS2_k127_4788103_1 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 302.0
MMS2_k127_4792648_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 381.0
MMS2_k127_4792648_1 Phosphoheptose isomerase K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 310.0
MMS2_k127_4792648_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000007966 95.0
MMS2_k127_4794187_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000001388 231.0
MMS2_k127_4794187_1 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.000000000000000000000000000000000000000000000000000000001328 204.0
MMS2_k127_4794187_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000009806 185.0
MMS2_k127_4794187_3 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000002352 66.0
MMS2_k127_4828057_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1398.0
MMS2_k127_4828057_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 7.195e-218 681.0
MMS2_k127_4828057_2 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 539.0
MMS2_k127_4828057_3 DNA-J related protein - - - 0.00000000000000000000000000000000000000000000000000000001069 205.0
MMS2_k127_4828057_4 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000000000000000001965 190.0
MMS2_k127_4828057_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000004803 124.0
MMS2_k127_483010_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007087 237.0
MMS2_k127_483010_1 DTW - - - 0.000000000000000000000000000000000000000000000000000302 192.0
MMS2_k127_483010_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000001316 157.0
MMS2_k127_483010_3 -acetyltransferase - - - 0.00000000000000000000003184 104.0
MMS2_k127_4858468_0 Part of the ABC transporter complex MglABC involved in galactose methyl galactoside import. Responsible for energy coupling to the transport system K02056,K10441,K10542,K10548,K17215 - 3.6.3.17 3.924e-245 762.0
MMS2_k127_4858468_1 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 380.0
MMS2_k127_4862377_0 The M ring may be actively involved in energy transduction K02409 - - 6.374e-290 897.0
MMS2_k127_4862377_1 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000000000000000000000000000007492 161.0
MMS2_k127_4862377_2 PFAM response regulator receiver K10943 - - 0.000000000000000000000000000003225 122.0
MMS2_k127_4868627_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 4.956e-215 668.0
MMS2_k127_4868627_1 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 362.0
MMS2_k127_4868627_2 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 295.0
MMS2_k127_4872850_0 Pilus formation protein N terminal region K02280 - - 7.917e-280 866.0
MMS2_k127_4872850_1 Flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 440.0
MMS2_k127_4872850_3 AAA domain K02282 - - 0.00000000000000000000000000004652 119.0
MMS2_k127_4873216_0 Tryptophan/tyrosine permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 546.0
MMS2_k127_4873216_1 CorA-like Mg2+ transporter protein K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 517.0
MMS2_k127_4873216_2 Sulfate permease family K03321 - - 0.0001124 47.0
MMS2_k127_4874826_0 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 552.0
MMS2_k127_4874826_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 406.0
MMS2_k127_4874826_2 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000000000000000003355 187.0
MMS2_k127_4874826_3 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.00000000000000000000000000001223 118.0
MMS2_k127_4875826_0 Stringent starvation protein A K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 372.0
MMS2_k127_4875826_1 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000000000000002686 193.0
MMS2_k127_4875826_2 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.0000000000000000000000000000000189 126.0
MMS2_k127_4887895_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.628e-196 629.0
MMS2_k127_4887895_1 chemotaxis, protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 548.0
MMS2_k127_4887895_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 357.0
MMS2_k127_490799_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526,K03676 - 1.17.4.1 2.001e-227 708.0
MMS2_k127_490799_1 ABC transporter K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 321.0
MMS2_k127_490799_2 AntiSigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000003446 225.0
MMS2_k127_4909741_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 4.525e-213 665.0
MMS2_k127_4909741_1 Lipopolysaccharide heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 411.0
MMS2_k127_4911697_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000001163 228.0
MMS2_k127_4911697_2 protein conserved in bacteria K09929 - - 0.0000000000000000000000000000000000002771 145.0
MMS2_k127_4924382_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 8.964e-256 794.0
MMS2_k127_4924382_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 305.0
MMS2_k127_4938524_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 6.349e-285 882.0
MMS2_k127_4938524_1 Diguanylate cyclase - - - 4.092e-256 803.0
MMS2_k127_4938524_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 471.0
MMS2_k127_4938524_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 332.0
MMS2_k127_4942109_0 Alpha amylase, catalytic domain K00690 - 2.4.1.7 5.498e-224 698.0
MMS2_k127_4942109_1 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 9.684e-221 686.0
MMS2_k127_4945444_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 362.0
MMS2_k127_4945444_1 KR domain - - - 0.000000000000000000004341 95.0
MMS2_k127_4955979_0 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 431.0
MMS2_k127_4955979_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 375.0
MMS2_k127_4955979_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002822 274.0
MMS2_k127_4955979_3 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000006346 241.0
MMS2_k127_4955979_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000001147 126.0
MMS2_k127_4966559_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 1.194e-216 675.0
MMS2_k127_4966559_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 2.42e-209 654.0
MMS2_k127_4966559_2 Belongs to the peptidase S11 family K07258 - 3.4.16.4 3.078e-199 626.0
MMS2_k127_4966559_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 8.092e-194 607.0
MMS2_k127_4966559_4 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 436.0
MMS2_k127_4966559_5 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 412.0
MMS2_k127_4966559_6 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 371.0
MMS2_k127_4966559_7 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 285.0
MMS2_k127_4966559_8 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003268 281.0
MMS2_k127_4966559_9 Protein of unknown function (DUF493) K09158 - - 0.0000000000000000000000000000000000000000000001768 168.0
MMS2_k127_4976851_0 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 526.0
MMS2_k127_4976851_1 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 465.0
MMS2_k127_4976851_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 430.0
MMS2_k127_4991023_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 8.495e-212 662.0
MMS2_k127_4991023_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 561.0
MMS2_k127_4991023_2 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 348.0
MMS2_k127_4991023_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007543 265.0
MMS2_k127_499713_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 543.0
MMS2_k127_499713_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 449.0
MMS2_k127_499713_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 453.0
MMS2_k127_499713_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 426.0
MMS2_k127_5007789_0 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 483.0
MMS2_k127_5007789_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 326.0
MMS2_k127_5010820_0 Protein of unknown function (DUF455) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 452.0
MMS2_k127_5010820_1 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 413.0
MMS2_k127_5010820_2 Pfam Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001634 234.0
MMS2_k127_5014677_0 GHMP kinases N terminal domain K00869 - 2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 498.0
MMS2_k127_5014677_1 decarboxylase K01597 - 4.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 466.0
MMS2_k127_5014677_2 GHMP kinases N terminal domain K00869 - 2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 348.0
MMS2_k127_5014677_3 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006211 261.0
MMS2_k127_5014776_0 von Willebrand factor type A domain - - - 0.0 1309.0
MMS2_k127_5014776_1 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601 - 4.1.1.39 6.305e-296 909.0
MMS2_k127_5014776_2 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 531.0
MMS2_k127_5014776_3 Transcriptional regulator, LysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 492.0
MMS2_k127_5014776_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000004949 53.0
MMS2_k127_504700_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 9.038e-224 698.0
MMS2_k127_504700_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 490.0
MMS2_k127_504700_2 cell division K03586 GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000000000000000002045 145.0
MMS2_k127_504700_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000005574 119.0
MMS2_k127_513503_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 400.0
MMS2_k127_513503_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000001566 106.0
MMS2_k127_535391_0 Diguanylate cyclase - - - 0.0 1881.0
MMS2_k127_535391_1 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 489.0
MMS2_k127_535391_2 LPP20 lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009588 284.0
MMS2_k127_535391_3 homoserine dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000008904 207.0
MMS2_k127_538781_0 Diguanylate cyclase phosphodiesterase - - - 0.0 1125.0
MMS2_k127_544749_0 Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 418.0
MMS2_k127_544749_1 Diguanylate cyclase K13069,K13590,K18967 GO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0016740,GO:0016772,GO:0016779,GO:0019825,GO:0020037,GO:0036094,GO:0042165,GO:0043167,GO:0043169,GO:0046906,GO:0048037,GO:0052621,GO:0070025,GO:0097159,GO:1901363 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 319.0
MMS2_k127_54802_0 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 420.0
MMS2_k127_54802_1 Gentisate 1,2-dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 408.0
MMS2_k127_54802_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008086 256.0
MMS2_k127_565839_0 Co Zn Cd efflux system component K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 409.0
MMS2_k127_565839_1 Diguanylate cyclase phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 383.0
MMS2_k127_565839_2 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 313.0
MMS2_k127_588910_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 2.364e-196 616.0
MMS2_k127_611908_0 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 581.0
MMS2_k127_611908_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 583.0
MMS2_k127_611908_2 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 350.0
MMS2_k127_611908_3 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000002057 169.0
MMS2_k127_616933_0 ABC transporter, ATP-binding protein - - - 2.006e-302 931.0
MMS2_k127_616933_1 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 460.0
MMS2_k127_620524_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1259.0
MMS2_k127_620524_1 Peptidase M16C associated K06972 - - 3.32e-284 878.0
MMS2_k127_623586_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 388.0
MMS2_k127_623586_1 Belongs to the MtfA family K09933 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006508,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0043170,GO:0043433,GO:0044092,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 374.0
MMS2_k127_623586_2 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001289 271.0
MMS2_k127_623586_4 membrane transporter protein K07090,K11312 - - 0.000000000000000000000000000000000000000000000000003039 182.0
MMS2_k127_624858_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 550.0
MMS2_k127_624858_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 286.0
MMS2_k127_625330_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 503.0
MMS2_k127_625330_1 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 284.0
MMS2_k127_625330_2 membrane K08973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005303 254.0
MMS2_k127_625330_3 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000004431 70.0
MMS2_k127_62715_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 444.0
MMS2_k127_62715_1 Alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 358.0
MMS2_k127_627503_0 inner membrane component K02034,K15582 - - 8.928e-200 631.0
MMS2_k127_627503_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 561.0
MMS2_k127_627503_2 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000003312 67.0
MMS2_k127_635228_0 PFAM TonB-dependent Receptor K02014 - - 0.0 1021.0
MMS2_k127_635228_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 2.943e-280 869.0
MMS2_k127_635228_2 PFAM Copper chaperone SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009412 267.0
MMS2_k127_635228_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000008702 261.0
MMS2_k127_635228_6 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000000000000000000000000000006552 214.0
MMS2_k127_635455_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1630.0
MMS2_k127_635455_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 8.662e-303 934.0
MMS2_k127_635455_2 H( )-stimulated, divalent metal cation uptake system K03322 GO:0000041,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015075,GO:0015077,GO:0015078,GO:0015086,GO:0015291,GO:0015292,GO:0015293,GO:0015318,GO:0015672,GO:0015684,GO:0015691,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042221,GO:0044425,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070574,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 600.0
MMS2_k127_635455_3 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 456.0
MMS2_k127_65133_0 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 467.0
MMS2_k127_65133_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 389.0
MMS2_k127_65133_2 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005897 256.0
MMS2_k127_65133_3 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 - - 0.00000000000000000000000000000000000000000000006491 170.0
MMS2_k127_654162_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1230.0
MMS2_k127_654162_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 502.0
MMS2_k127_654162_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 462.0
MMS2_k127_654162_3 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 353.0
MMS2_k127_654162_4 Bacterial transferase hexapeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 304.0
MMS2_k127_654162_5 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000008074 243.0
MMS2_k127_654162_7 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000002005 91.0
MMS2_k127_654162_8 thiamine diphosphate biosynthetic process K03149,K03154 - 2.8.1.10 0.000000000000003283 78.0
MMS2_k127_65893_0 Catalyzes the conversion of dihydroorotate to orotate K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 576.0
MMS2_k127_65893_1 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 283.0
MMS2_k127_65893_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000003499 117.0
MMS2_k127_65893_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000003287 99.0
MMS2_k127_659590_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 1.404e-261 815.0
MMS2_k127_659590_1 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 512.0
MMS2_k127_659590_2 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004875 405.0
MMS2_k127_659590_3 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000001105 94.0
MMS2_k127_663896_0 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 560.0
MMS2_k127_663896_1 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 466.0
MMS2_k127_663896_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 424.0
MMS2_k127_663896_3 PFAM binding-protein-dependent transport systems inner membrane component K02033,K15581 - - 0.00000000000000000000000000004442 115.0
MMS2_k127_669413_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 521.0
MMS2_k127_669413_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 426.0
MMS2_k127_669413_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000007866 138.0
MMS2_k127_672438_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1737.0
MMS2_k127_672438_1 TIGRFAM efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 - - 3.389e-223 701.0
MMS2_k127_696868_0 AsmA family K07289 - - 1.511e-232 741.0
MMS2_k127_696868_1 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 407.0
MMS2_k127_696868_2 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 401.0
MMS2_k127_711430_0 helicase superfamily c-terminal domain - - - 3.578e-222 692.0
MMS2_k127_711430_1 PFAM NADH flavin oxidoreductase NADH oxidase family K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 344.0
MMS2_k127_711430_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000004279 161.0
MMS2_k127_711430_3 Flavodoxin-like fold - - - 0.0000000000000000000000000000007664 122.0
MMS2_k127_715492_0 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 2.05e-303 932.0
MMS2_k127_715492_1 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 533.0
MMS2_k127_715492_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 335.0
MMS2_k127_715492_3 phosphate transport regulator (Distant homolog of PhoU) K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 325.0
MMS2_k127_715492_4 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001506 266.0
MMS2_k127_724143_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 539.0
MMS2_k127_724143_1 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 360.0
MMS2_k127_724143_2 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 345.0
MMS2_k127_724143_3 - - - - 0.0000000000001855 71.0
MMS2_k127_732771_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 533.0
MMS2_k127_732771_2 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000122 221.0
MMS2_k127_732771_3 HemY protein N-terminus K02498 - - 0.000000000000001536 76.0
MMS2_k127_737981_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 602.0
MMS2_k127_737981_1 SRP54-type protein, GTPase domain K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 561.0
MMS2_k127_737981_2 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000649 251.0
MMS2_k127_740726_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 9.263e-217 677.0
MMS2_k127_740726_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 407.0
MMS2_k127_740726_2 Double sensory domain of two-component sensor kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 282.0
MMS2_k127_740726_3 glycine decarboxylation via glycine cleavage system K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000000000002323 187.0
MMS2_k127_744771_0 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 359.0
MMS2_k127_744771_1 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000102 284.0
MMS2_k127_748481_0 Molecular chaperone. Has ATPase activity K04079 - - 5e-324 996.0
MMS2_k127_748481_1 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.00000000000000000000000000000000000000000000000000000000000003442 216.0
MMS2_k127_753853_0 Cell wall formation K00075 - 1.3.1.98 5.826e-202 632.0
MMS2_k127_753853_1 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000003851 162.0
MMS2_k127_753853_2 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000009691 130.0
MMS2_k127_754323_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 435.0
MMS2_k127_754323_1 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 299.0
MMS2_k127_754323_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 297.0
MMS2_k127_754323_3 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 287.0
MMS2_k127_756871_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 577.0
MMS2_k127_756871_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 432.0
MMS2_k127_756871_2 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000001538 149.0
MMS2_k127_756892_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 555.0
MMS2_k127_758564_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 361.0
MMS2_k127_758564_1 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000004659 145.0
MMS2_k127_758564_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000002341 143.0
MMS2_k127_758564_3 LppC putative lipoprotein K07121 - - 0.000000000000000000003314 96.0
MMS2_k127_766764_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 409.0
MMS2_k127_766764_1 - - - - 0.00000000000000000001675 94.0
MMS2_k127_769599_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0 1183.0
MMS2_k127_769599_1 COG0348 Polyferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000009566 233.0
MMS2_k127_769599_2 peptidase K01414 - 3.4.24.70 0.0000000000005695 70.0
MMS2_k127_774110_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 603.0
MMS2_k127_774110_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 587.0
MMS2_k127_774110_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 342.0
MMS2_k127_774110_4 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004211 222.0
MMS2_k127_79694_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 574.0
MMS2_k127_79694_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000004204 160.0
MMS2_k127_799913_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 430.0
MMS2_k127_812449_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000008462 238.0
MMS2_k127_815379_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1147.0
MMS2_k127_815379_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.875e-287 886.0
MMS2_k127_815379_2 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 359.0
MMS2_k127_815379_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002661 276.0
MMS2_k127_824834_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 1.052e-254 789.0
MMS2_k127_824834_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 581.0
MMS2_k127_824834_2 sodium:proton antiporter activity K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008705 404.0
MMS2_k127_824834_3 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000000000000000000000000000000000000007969 206.0
MMS2_k127_824834_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000005178 67.0
MMS2_k127_834793_0 Pfam:DUF258 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 603.0
MMS2_k127_834793_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 571.0
MMS2_k127_834793_2 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 545.0
MMS2_k127_844210_0 PFAM von Willebrand factor type A - - - 0.0 1316.0
MMS2_k127_844210_1 PFAM AAA domain (dynein-related subfamily) K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 395.0
MMS2_k127_858324_0 PFAM alpha amylase, catalytic K05341 - 2.4.1.4 0.0 1206.0
MMS2_k127_858324_1 sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial K00696 - 2.4.1.14 0.0 1170.0
MMS2_k127_858324_2 PFAM PfkB domain protein K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 376.0
MMS2_k127_858324_3 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 341.0
MMS2_k127_858324_4 EamA-like transporter family - - - 0.0000000000000000003118 89.0
MMS2_k127_874291_0 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 361.0
MMS2_k127_874291_1 CHAD - - - 0.000000004176 60.0
MMS2_k127_878892_0 FAD linked oxidases, C-terminal domain - - - 6.27e-203 637.0
MMS2_k127_879062_0 Peptidoglycan polymerase that is essential for cell division K03588 - - 1.107e-216 676.0
MMS2_k127_879062_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 560.0
MMS2_k127_879062_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 459.0
MMS2_k127_879062_3 KR domain K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000008513 261.0
MMS2_k127_879062_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000006835 186.0
MMS2_k127_892788_0 chemotaxis, protein K03406 - - 2.224e-278 870.0
MMS2_k127_892788_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 361.0
MMS2_k127_900589_0 PFAM Peptidase family U32 K08303 - - 5.343e-318 975.0
MMS2_k127_900589_1 DNA glycosylase K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 283.0
MMS2_k127_900589_2 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000000005187 186.0
MMS2_k127_900589_3 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000000000007554 190.0
MMS2_k127_900589_4 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0000000000000000000000000000000005595 135.0
MMS2_k127_914143_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0 1045.0
MMS2_k127_914143_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 9.402e-307 948.0
MMS2_k127_914143_10 AefR-like transcriptional repressor, C-terminal region - - - 0.00000000000004705 73.0
MMS2_k127_914143_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 4.499e-266 820.0
MMS2_k127_914143_3 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 3.206e-263 812.0
MMS2_k127_914143_4 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.979e-257 796.0
MMS2_k127_914143_5 PFAM Peptidase family M20 M25 M40 K01436 - - 3.222e-220 687.0
MMS2_k127_914143_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 4.82e-201 629.0
MMS2_k127_914143_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 293.0
MMS2_k127_914143_8 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000000000000000000002941 231.0
MMS2_k127_914143_9 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000000006184 134.0
MMS2_k127_91853_0 HPP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 424.0
MMS2_k127_91853_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 296.0
MMS2_k127_91853_2 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 291.0
MMS2_k127_91853_3 Protein of unknown function (DUF2789) - - - 0.00000000000000000000008835 100.0
MMS2_k127_91853_4 Diguanylate cyclase - - - 0.0000006709 55.0
MMS2_k127_92205_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 0.0 1173.0
MMS2_k127_92205_1 PFAM YicC-like family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 291.0
MMS2_k127_946546_0 Carboxysome Shell Carbonic Anhydrase - - - 4.515e-261 805.0
MMS2_k127_946546_1 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 331.0
MMS2_k127_946546_2 PFAM Microcompartment protein, bacteria - - - 0.00000000000000000000000000000000000000000000000000009156 186.0
MMS2_k127_946546_3 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.0000000000000000000000000000000000000000000000000003749 185.0
MMS2_k127_946546_4 utilization protein K04027 - - 0.000000000000000000000000000000000000000000000000001654 183.0
MMS2_k127_946546_5 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000000000000000000000000000000000000000108 163.0
MMS2_k127_946546_6 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml - - - 0.000000000000000000000000000000000000000006266 156.0
MMS2_k127_946546_7 Pterin 4 alpha carbinolamine dehydratase - - - 0.00000000000000000000001424 100.0
MMS2_k127_958056_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 493.0
MMS2_k127_958056_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 436.0
MMS2_k127_958056_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 392.0
MMS2_k127_958056_3 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 392.0
MMS2_k127_958056_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 311.0
MMS2_k127_961942_0 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 499.0
MMS2_k127_961942_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 429.0
MMS2_k127_961942_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 299.0
MMS2_k127_966026_0 acid synthase K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000001031 261.0
MMS2_k127_966026_1 glutamine metabolic process K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000978 226.0
MMS2_k127_966026_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000001266 201.0
MMS2_k127_966026_3 Phosphotransferase enzyme family - - - 0.000000156 60.0
MMS2_k127_966896_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.334e-267 827.0
MMS2_k127_966896_1 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 1.146e-238 743.0
MMS2_k127_966896_2 Belongs to the DEAD box helicase family K05590 - 3.6.4.13 7.77e-197 619.0
MMS2_k127_966896_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 387.0
MMS2_k127_966896_4 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 382.0
MMS2_k127_966896_5 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000003751 189.0
MMS2_k127_987068_0 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 403.0
MMS2_k127_987068_1 Protein of unknown function (DUF3616) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 313.0
MMS2_k127_987068_2 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004034 261.0
MMS2_k127_987068_3 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000004302 235.0
MMS2_k127_987068_4 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000000000000000004843 226.0