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Overview

ID MAG02788
Name MMS3_bin.22
Sample SMP0066
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfobacteria
Order Desulfobacterales
Family Desulfosalsimonadaceae
Genus
Species
Assembly information
Completeness (%) 83.81
Contamination (%) 2.75
GC content (%) 54.0
N50 (bp) 8,846
Genome size (bp) 3,347,702

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2964

Gene name Description KEGG GOs EC E-value Score Sequence
MMS3_k127_1007430_0 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 318.0
MMS3_k127_1007430_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002159 286.0
MMS3_k127_1007430_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001235 266.0
MMS3_k127_1007430_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000004901 239.0
MMS3_k127_1042654_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1387.0
MMS3_k127_1042654_1 Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000009977 158.0
MMS3_k127_1051704_0 haemagglutination activity domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 562.0
MMS3_k127_1051704_1 - - - - 0.00000000000000000000000000000000000000000000000000288 184.0
MMS3_k127_1051704_2 viral genome integration into host DNA K04763 - - 0.00000000000000000000000000000000000000000000000002434 183.0
MMS3_k127_1051704_3 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000001051 94.0
MMS3_k127_1051704_4 toxin-antitoxin pair type II binding - - - 0.0000000000000002168 81.0
MMS3_k127_1059252_0 PFAM Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 349.0
MMS3_k127_1059252_1 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 308.0
MMS3_k127_1059252_10 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.0000000000000000000001779 98.0
MMS3_k127_1059252_11 - - - - 0.00000000000000003173 86.0
MMS3_k127_1059252_12 - - - - 0.0000000000000002646 80.0
MMS3_k127_1059252_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 282.0
MMS3_k127_1059252_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007603 246.0
MMS3_k127_1059252_4 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000002286 233.0
MMS3_k127_1059252_5 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000001062 208.0
MMS3_k127_1059252_6 - - - - 0.0000000000000000000000000000000000004905 147.0
MMS3_k127_1059252_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000001106 129.0
MMS3_k127_1059252_8 - - - - 0.0000000000000000000000000005094 115.0
MMS3_k127_1061546_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 1.553e-229 721.0
MMS3_k127_1061546_1 PFAM Radical SAM domain protein K22226 - - 1.175e-218 682.0
MMS3_k127_1061546_2 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 559.0
MMS3_k127_1061546_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 527.0
MMS3_k127_1061546_4 PFAM glycoside hydrolase family 3 domain protein K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 348.0
MMS3_k127_1061546_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 283.0
MMS3_k127_1061546_6 Peptidase family C69 - - - 0.000000000000000000000000000000000000009136 156.0
MMS3_k127_1075467_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.525e-220 698.0
MMS3_k127_1075467_1 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 439.0
MMS3_k127_1075467_2 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 407.0
MMS3_k127_1075467_3 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000004574 184.0
MMS3_k127_11083_0 Major Facilitator Superfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009268 571.0
MMS3_k127_11083_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 349.0
MMS3_k127_11083_2 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003915 269.0
MMS3_k127_11083_3 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000000000000005321 188.0
MMS3_k127_11083_4 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000004431 195.0
MMS3_k127_11083_5 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000374 166.0
MMS3_k127_11083_6 transcriptional regulator, (TetR family - - - 0.00000000000000000000000000000000000001658 156.0
MMS3_k127_11083_7 - - - - 0.00000000000000000000000000000002268 132.0
MMS3_k127_1109006_0 PFAM peptidase M29 aminopeptidase II K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 409.0
MMS3_k127_1109006_1 Phosphomannose isomerase type I K01809,K01840 - 5.3.1.8,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 401.0
MMS3_k127_1109006_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001306 281.0
MMS3_k127_1109006_3 Domain of unknown function (DUF4124) - - - 0.0005787 45.0
MMS3_k127_1115772_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 398.0
MMS3_k127_1115772_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 398.0
MMS3_k127_1115772_2 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000339 256.0
MMS3_k127_1115772_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000005663 193.0
MMS3_k127_1126255_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1986.0
MMS3_k127_1126255_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 519.0
MMS3_k127_1126255_10 molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 - 2.7.7.77 0.00000000000000000000000000000000004542 139.0
MMS3_k127_1126255_11 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000007718 106.0
MMS3_k127_1126255_12 pilus assembly protein PilW - - - 0.00000000000000256 85.0
MMS3_k127_1126255_13 - - - - 0.00000008931 60.0
MMS3_k127_1126255_14 Pilin (bacterial filament) - - - 0.0001542 50.0
MMS3_k127_1126255_15 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0002688 48.0
MMS3_k127_1126255_2 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 532.0
MMS3_k127_1126255_3 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 408.0
MMS3_k127_1126255_4 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 383.0
MMS3_k127_1126255_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 353.0
MMS3_k127_1126255_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 318.0
MMS3_k127_1126255_7 Rhodopirellula transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000001487 189.0
MMS3_k127_1126255_8 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000005139 177.0
MMS3_k127_1126255_9 - - - - 0.00000000000000000000000000000000000000000000004275 180.0
MMS3_k127_1132981_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 1.104e-204 652.0
MMS3_k127_1132981_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 461.0
MMS3_k127_1132981_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.00000000008004 63.0
MMS3_k127_1137012_0 drug resistance transporter Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 597.0
MMS3_k127_1137012_1 Dehydrogenase K00004,K00008 - 1.1.1.14,1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 543.0
MMS3_k127_1137012_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 464.0
MMS3_k127_1137012_3 PFAM Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 299.0
MMS3_k127_1137012_4 PFAM Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000122 234.0
MMS3_k127_1137012_5 Flavodoxin - - - 0.0000000000000000000000000000000000000000000000001446 181.0
MMS3_k127_1137012_6 PFAM AraC-type transcriptional regulator - - - 0.0000000000000000000000000000000000000000009175 159.0
MMS3_k127_1137012_7 PFAM Iron-containing alcohol dehydrogenase K00001,K08325 - 1.1.1.1 0.000004207 49.0
MMS3_k127_1137012_8 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00006219 47.0
MMS3_k127_115273_0 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 488.0
MMS3_k127_115273_1 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 459.0
MMS3_k127_115273_10 peptidase - - - 0.00000000127 64.0
MMS3_k127_115273_11 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.000000001409 60.0
MMS3_k127_115273_2 Oxidoreductase FAD-binding domain K00523,K14581,K16246,K18225 - 1.17.1.1,1.18.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 408.0
MMS3_k127_115273_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K21577 - 1.21.4.2,1.21.4.3,1.21.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 406.0
MMS3_k127_115273_4 Polypeptide-transport-associated domain protein ShlB-type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009638 349.0
MMS3_k127_115273_5 Glycine reductase complex component B subunit gamma K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 320.0
MMS3_k127_115273_6 Glycine/sarcosine/betaine reductase component B subunits K10671 - 1.21.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000005086 265.0
MMS3_k127_115273_7 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002691 230.0
MMS3_k127_115273_8 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.0000000000000000000000003741 108.0
MMS3_k127_115273_9 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10672 - 1.21.4.2 0.0000000000000001098 82.0
MMS3_k127_115383_0 Beta-eliminating lyase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 542.0
MMS3_k127_115383_1 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 485.0
MMS3_k127_115383_2 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 393.0
MMS3_k127_115383_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 349.0
MMS3_k127_115383_4 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000002014 181.0
MMS3_k127_115383_5 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000001885 175.0
MMS3_k127_115383_6 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000001994 130.0
MMS3_k127_115383_7 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000001209 90.0
MMS3_k127_1160202_0 Elongation factor Tu domain 2 K02355 - - 5e-324 1002.0
MMS3_k127_1160202_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 3.305e-197 619.0
MMS3_k127_1160202_10 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 411.0
MMS3_k127_1160202_11 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 390.0
MMS3_k127_1160202_12 Amidohydrolase family K20810 - 3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 365.0
MMS3_k127_1160202_13 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 343.0
MMS3_k127_1160202_14 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001309 284.0
MMS3_k127_1160202_15 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000802 250.0
MMS3_k127_1160202_16 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000003433 242.0
MMS3_k127_1160202_17 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000001412 196.0
MMS3_k127_1160202_18 lyase activity - - - 0.0000000000000000000000000000000000000000000000000001704 198.0
MMS3_k127_1160202_19 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000000000000000002434 198.0
MMS3_k127_1160202_2 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 599.0
MMS3_k127_1160202_20 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000006473 180.0
MMS3_k127_1160202_21 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000002061 156.0
MMS3_k127_1160202_22 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000006552 130.0
MMS3_k127_1160202_23 Methyltransferase domain - - - 0.0000000000000000000722 90.0
MMS3_k127_1160202_24 PilZ domain - - - 0.0006633 48.0
MMS3_k127_1160202_3 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 556.0
MMS3_k127_1160202_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 514.0
MMS3_k127_1160202_5 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 508.0
MMS3_k127_1160202_6 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 448.0
MMS3_k127_1160202_7 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 436.0
MMS3_k127_1160202_8 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 426.0
MMS3_k127_1160202_9 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 411.0
MMS3_k127_1168596_0 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 447.0
MMS3_k127_1168596_1 Alpha beta hydrolase superfamily K01563 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 329.0
MMS3_k127_1168596_2 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003992 276.0
MMS3_k127_1168596_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002701 250.0
MMS3_k127_1168596_4 - - - - 0.00000000000000000000000000000006708 126.0
MMS3_k127_1168596_5 PFAM TOBE domain K02019 - - 0.000000000000001256 78.0
MMS3_k127_1168596_6 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0001665 45.0
MMS3_k127_1171449_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 488.0
MMS3_k127_1171449_1 PFAM TrkA-N domain K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 406.0
MMS3_k127_1171449_2 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 311.0
MMS3_k127_1171449_3 PFAM peptidase K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 299.0
MMS3_k127_1171449_4 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000166 286.0
MMS3_k127_1171449_5 PFAM ABC transporter K09812 - - 0.000000000000000000001513 96.0
MMS3_k127_1171449_6 Part of the ABC transporter FtsEX involved in cellular division K09811 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0009274,GO:0009276,GO:0009987,GO:0016020,GO:0016021,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032153,GO:0044425,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000002375 90.0
MMS3_k127_1176684_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 2.888e-280 871.0
MMS3_k127_1176684_1 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 1.556e-207 662.0
MMS3_k127_1176684_2 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002022 261.0
MMS3_k127_1176684_3 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000001223 160.0
MMS3_k127_1176684_4 - K03571 - - 0.00000000000000009645 87.0
MMS3_k127_1176684_5 - - - - 0.00000003061 54.0
MMS3_k127_1176768_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 1.249e-300 937.0
MMS3_k127_1176768_1 VWA containing CoxE family protein K09989 - - 9.822e-203 636.0
MMS3_k127_1176768_2 PFAM AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 475.0
MMS3_k127_1176768_3 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 428.0
MMS3_k127_1176768_4 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 383.0
MMS3_k127_1176768_5 SH3 domain - - - 0.000000000000000000000000000000000000000001138 162.0
MMS3_k127_1176768_6 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000009302 118.0
MMS3_k127_1176768_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000005592 73.0
MMS3_k127_1176768_8 - - - - 0.00000003061 54.0
MMS3_k127_1188322_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1313.0
MMS3_k127_1188322_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 384.0
MMS3_k127_1188322_2 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 355.0
MMS3_k127_1188322_3 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 307.0
MMS3_k127_1188322_4 DNA polymerase III, delta' K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 310.0
MMS3_k127_1188322_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 296.0
MMS3_k127_1188322_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000002799 193.0
MMS3_k127_1188322_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000003951 166.0
MMS3_k127_1188322_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000004804 94.0
MMS3_k127_1188322_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000001883 82.0
MMS3_k127_1198437_0 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 353.0
MMS3_k127_1198437_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 333.0
MMS3_k127_1198437_2 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000005984 190.0
MMS3_k127_1198437_3 YacP-like NYN domain K06962 - - 0.0000003972 54.0
MMS3_k127_1213830_0 Peptidase M16C associated K06972 - - 0.0 1167.0
MMS3_k127_1213830_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000001508 132.0
MMS3_k127_1213830_2 - - - - 0.00000000000001038 78.0
MMS3_k127_12252_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 325.0
MMS3_k127_12252_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000003145 235.0
MMS3_k127_12252_2 - - - - 0.000000000000000000000000000000000000000001877 156.0
MMS3_k127_12252_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000003145 117.0
MMS3_k127_1231651_0 Aldo/keto reductase family K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 602.0
MMS3_k127_1231651_1 NADH flavin oxidoreductase NADH oxidase K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 595.0
MMS3_k127_1231651_2 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 484.0
MMS3_k127_1231651_3 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 359.0
MMS3_k127_1231651_4 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.00000000000000000000000000000000000000000000000000000000000000001034 231.0
MMS3_k127_1231651_5 Domain of unknown function (DUF362) - - - 0.0000000002327 73.0
MMS3_k127_126875_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.067e-302 942.0
MMS3_k127_126875_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 1.484e-251 783.0
MMS3_k127_126875_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 514.0
MMS3_k127_126875_3 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 428.0
MMS3_k127_126875_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000002149 229.0
MMS3_k127_126875_5 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000002386 106.0
MMS3_k127_126875_6 Belongs to the thioredoxin family K03671 - - 0.000000000000000000001481 94.0
MMS3_k127_1286670_0 Belongs to the methyltransferase superfamily K06969,K12297 - 2.1.1.173,2.1.1.191,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 436.0
MMS3_k127_1286670_1 NMT1/THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 338.0
MMS3_k127_1286670_2 acetylesterase activity - - - 0.00000000000000000000000000000000000000000000000000000000000006942 226.0
MMS3_k127_1297906_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 548.0
MMS3_k127_1297906_1 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 534.0
MMS3_k127_1297906_2 FAD dependent oxidoreductase K00313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 406.0
MMS3_k127_1297906_3 Electron transfer flavoprotein K03522,K22432 - 1.3.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 293.0
MMS3_k127_1297906_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03855 - - 0.0000000000000000000000001008 109.0
MMS3_k127_1297906_5 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000001791 90.0
MMS3_k127_1297906_6 Electron transfer flavoprotein K03521 - - 0.00000000000000003682 86.0
MMS3_k127_1303588_0 PFAM sigma-54 factor interaction domain-containing protein - - - 7.488e-311 977.0
MMS3_k127_1303588_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897,K02182,K22133 - 6.2.1.3,6.2.1.48,6.2.1.8 2.876e-222 701.0
MMS3_k127_1303588_10 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000000000000008644 136.0
MMS3_k127_1303588_11 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000001108 54.0
MMS3_k127_1303588_2 PFAM Mammalian cell entry related domain protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 548.0
MMS3_k127_1303588_3 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 509.0
MMS3_k127_1303588_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 381.0
MMS3_k127_1303588_5 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 323.0
MMS3_k127_1303588_6 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003744 281.0
MMS3_k127_1303588_7 Paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001089 273.0
MMS3_k127_1303588_8 Paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000000000000000000000000000001193 203.0
MMS3_k127_1303588_9 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000075 188.0
MMS3_k127_1314947_0 Pyridine nucleotide-disulphide oxidoreductase - - - 2.374e-305 959.0
MMS3_k127_1314947_1 binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 6.09e-223 706.0
MMS3_k127_132125_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 429.0
MMS3_k127_132125_1 Domain of unknown function (DUF4301) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 336.0
MMS3_k127_132125_2 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003426 259.0
MMS3_k127_132125_3 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000006141 157.0
MMS3_k127_1328419_0 Belongs to the thiolase family K00626 - 2.3.1.9 1.721e-205 646.0
MMS3_k127_1328419_1 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 612.0
MMS3_k127_1328419_2 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003246 254.0
MMS3_k127_1328419_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000001131 220.0
MMS3_k127_1328419_4 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.000000000000000000000000000000000000000006192 154.0
MMS3_k127_1340934_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.0 1060.0
MMS3_k127_1389177_0 oxidoreductase activity - - - 1.116e-243 777.0
MMS3_k127_1389177_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 562.0
MMS3_k127_1389177_2 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 429.0
MMS3_k127_1389177_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 376.0
MMS3_k127_1389177_4 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 353.0
MMS3_k127_1389177_5 - - - - 0.000000000000000000000000000000000000000002528 169.0
MMS3_k127_1389177_6 SurA N-terminal domain K03770 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552 5.2.1.8 0.000000000001773 80.0
MMS3_k127_1390960_0 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 1.798e-267 828.0
MMS3_k127_1390960_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 581.0
MMS3_k127_1390960_2 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006957 266.0
MMS3_k127_1390960_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000006715 80.0
MMS3_k127_1404017_0 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 3.125e-230 726.0
MMS3_k127_1404017_1 light absorption K06893 - - 0.00000000000000000000000000000000000000000000000004222 183.0
MMS3_k127_1404017_2 DegV family - - - 0.0000000000000000000000000000000000000002853 160.0
MMS3_k127_1409082_0 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 473.0
MMS3_k127_1409082_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 296.0
MMS3_k127_1412427_0 Berberine and berberine like - - - 1.458e-214 675.0
MMS3_k127_1412427_1 PFAM formate C-acetyltransferase glycine radical K00656,K20038 - 2.3.1.54,4.3.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 507.0
MMS3_k127_1412427_2 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 473.0
MMS3_k127_1412427_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001785 278.0
MMS3_k127_1412427_4 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000284 249.0
MMS3_k127_1412427_5 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000001162 68.0
MMS3_k127_143367_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003582 275.0
MMS3_k127_143367_1 DNA integration - - - 0.0006339 46.0
MMS3_k127_1442119_0 AMP-binding enzyme K01897 - 6.2.1.3 2.715e-271 845.0
MMS3_k127_1442119_1 Transposase and inactivated derivatives, TnpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 427.0
MMS3_k127_1442119_2 PFAM Acetyl-CoA hydrolase transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 387.0
MMS3_k127_1442119_3 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 336.0
MMS3_k127_1442119_4 L COG1961 Site-specific recombinases, DNA invertase Pin homologs K14060 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 319.0
MMS3_k127_1442119_5 - - - - 0.0000000000000000000001753 99.0
MMS3_k127_1442119_6 - - - - 0.000000000000000000004804 94.0
MMS3_k127_1442119_7 - - - - 0.0000000000000002691 80.0
MMS3_k127_1442119_8 Putative regulatory protein - - - 0.0000000001335 64.0
MMS3_k127_144986_0 SMART Elongator protein 3 MiaB NifB - - - 4.34e-231 727.0
MMS3_k127_144986_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 1.408e-202 636.0
MMS3_k127_144986_2 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 305.0
MMS3_k127_145598_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1576.0
MMS3_k127_145598_1 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 392.0
MMS3_k127_145598_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 337.0
MMS3_k127_1462289_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1028.0
MMS3_k127_1462289_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.000000000000000000000000000000000000000000000000000000003372 207.0
MMS3_k127_146429_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 1.19e-318 1013.0
MMS3_k127_146429_1 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 9.797e-230 724.0
MMS3_k127_146429_2 PD-(D/E)XK nuclease superfamily - - - 4.408e-225 728.0
MMS3_k127_146429_3 Belongs to the aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 532.0
MMS3_k127_146429_4 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 508.0
MMS3_k127_146429_5 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 417.0
MMS3_k127_146429_6 metal-dependent phosphohydrolase HD region K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 391.0
MMS3_k127_146429_7 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 303.0
MMS3_k127_146429_8 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002461 262.0
MMS3_k127_146429_9 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.00000001223 57.0
MMS3_k127_14705_0 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 3.925e-234 734.0
MMS3_k127_14705_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 451.0
MMS3_k127_14705_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 350.0
MMS3_k127_14705_3 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003935 265.0
MMS3_k127_1482080_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 5.806e-237 742.0
MMS3_k127_1482080_1 helix_turn_helix, Lux Regulon K02479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 301.0
MMS3_k127_1482080_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001426 259.0
MMS3_k127_1482080_3 PAS fold - - - 0.000000000000000000000000000002063 136.0
MMS3_k127_1482080_4 - - - - 0.000000000000000000000000000008725 121.0
MMS3_k127_1482080_5 - - - - 0.0005888 46.0
MMS3_k127_1488281_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1179.0
MMS3_k127_1488281_1 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 447.0
MMS3_k127_1488281_2 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000005065 166.0
MMS3_k127_1488281_3 Belongs to the P(II) protein family - - - 0.00000000000000000000003576 102.0
MMS3_k127_1488281_4 ubiE/COQ5 methyltransferase family - - - 0.000000000000001979 81.0
MMS3_k127_1489223_0 Methylmalonyl-CoA mutase - - - 1.112e-300 928.0
MMS3_k127_1489223_1 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 430.0
MMS3_k127_1489223_2 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 392.0
MMS3_k127_1489223_3 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002705 207.0
MMS3_k127_1489223_4 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000006611 164.0
MMS3_k127_1493542_0 PFAM Protein kinase domain K05385,K12132,K13590 - 2.7.11.1,2.7.7.65 5.256e-266 871.0
MMS3_k127_1493542_1 TIGRFAM threonine synthase K01733 - 4.2.3.1 8.617e-243 758.0
MMS3_k127_1493542_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 5.731e-208 653.0
MMS3_k127_1493542_3 AAA ATPase K07478 - - 6.944e-197 622.0
MMS3_k127_1493542_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 556.0
MMS3_k127_1493542_5 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000353 206.0
MMS3_k127_1493542_6 Cytidylate kinase-like family - - - 0.00000000000000007963 83.0
MMS3_k127_1493542_7 AAA domain - - - 0.0000000009337 66.0
MMS3_k127_1493542_8 LysM domain - - - 0.000000008318 59.0
MMS3_k127_1538660_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1177.0
MMS3_k127_1538660_1 PFAM ferredoxin - - - 6.059e-306 948.0
MMS3_k127_1538660_10 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000002735 61.0
MMS3_k127_1538660_11 Uncharacterised nucleotidyltransferase - - - 0.00000006537 64.0
MMS3_k127_1538660_12 Peptidase S24-like K13280 - 3.4.21.89 0.00002396 53.0
MMS3_k127_1538660_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.718e-299 934.0
MMS3_k127_1538660_3 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 7.623e-204 646.0
MMS3_k127_1538660_4 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 547.0
MMS3_k127_1538660_5 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006562 276.0
MMS3_k127_1538660_6 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005677 262.0
MMS3_k127_1538660_7 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000149 192.0
MMS3_k127_1538660_8 ATPase-coupled phosphate ion transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000005752 179.0
MMS3_k127_1538660_9 Belongs to the Fur family K03711 - - 0.0000000000000000000003101 98.0
MMS3_k127_1542604_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1031.0
MMS3_k127_1542604_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 1.287e-194 627.0
MMS3_k127_1542604_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 597.0
MMS3_k127_1542604_3 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 514.0
MMS3_k127_1542604_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 427.0
MMS3_k127_1542604_5 RimK-like ATP-grasp domain K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 351.0
MMS3_k127_1542604_6 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000007825 191.0
MMS3_k127_1542604_7 - - - - 0.0000000000000000000004685 106.0
MMS3_k127_15437_0 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 561.0
MMS3_k127_15437_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 465.0
MMS3_k127_15437_2 Bifunctional protein K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 351.0
MMS3_k127_15437_3 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 282.0
MMS3_k127_15437_4 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000001136 97.0
MMS3_k127_15437_5 Belongs to the UPF0235 family K09131 - - 0.00000000000000000005769 97.0
MMS3_k127_15437_6 - - - - 0.00000000006576 63.0
MMS3_k127_15437_7 Transposase IS200 like K07491 - - 0.0000004763 53.0
MMS3_k127_1551771_0 Belongs to the GPI family K01810 - 5.3.1.9 7.066e-217 685.0
MMS3_k127_1551771_1 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 351.0
MMS3_k127_1551771_2 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000009493 107.0
MMS3_k127_1556892_0 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K11384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 464.0
MMS3_k127_1556892_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 342.0
MMS3_k127_1556892_2 nucleotidyltransferase activity K00984 - 2.7.7.47 0.000000000000000000000000000000000000273 153.0
MMS3_k127_1556892_3 phosphorelay signal transduction system K07713,K07714 - - 0.000000000000006917 81.0
MMS3_k127_1556892_4 Histidine kinase - - - 0.00000000002621 68.0
MMS3_k127_156455_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 8.918e-310 975.0
MMS3_k127_156455_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.153e-211 674.0
MMS3_k127_156455_2 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 591.0
MMS3_k127_156455_3 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000001201 182.0
MMS3_k127_156455_4 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000000000000002291 133.0
MMS3_k127_156455_5 Regulatory protein - - - 0.000000000000000000000000004171 114.0
MMS3_k127_1566662_0 Psort location Cytoplasmic, score K07137 - - 8.948e-211 666.0
MMS3_k127_1566662_1 UPF0210 protein K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 565.0
MMS3_k127_1566662_10 Glutamate-cysteine ligase family 2(GCS2) - - - 0.00000000000000000000000000000000000000001936 158.0
MMS3_k127_1566662_11 Histidine kinase - - - 0.000000000000000000000009976 113.0
MMS3_k127_1566662_12 ACT domain protein K07166 - - 0.000000000000000000001069 97.0
MMS3_k127_1566662_13 PFAM Response regulator receiver domain - - - 0.0000000000000003508 89.0
MMS3_k127_1566662_14 Nucleotidyltransferase substrate binding protein like - - - 0.0000000000107 72.0
MMS3_k127_1566662_15 metal-dependent phosphohydrolase HD - - - 0.0001178 46.0
MMS3_k127_1566662_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 325.0
MMS3_k127_1566662_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006746 276.0
MMS3_k127_1566662_4 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001585 253.0
MMS3_k127_1566662_5 Carbohydrate-binding family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003896 250.0
MMS3_k127_1566662_6 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000159 222.0
MMS3_k127_1566662_7 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000006485 201.0
MMS3_k127_1566662_8 2TM domain - - - 0.0000000000000000000000000000000000000000000000000005474 196.0
MMS3_k127_1566662_9 spheroidene biosynthetic process - - - 0.0000000000000000000000000000000000000000000000304 183.0
MMS3_k127_1578220_0 4Fe-4S dicluster domain - - - 2.342e-296 919.0
MMS3_k127_1578220_1 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 574.0
MMS3_k127_1578220_2 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 507.0
MMS3_k127_1578220_3 PFAM Electron transfer flavoprotein alpha K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 467.0
MMS3_k127_1578220_4 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 443.0
MMS3_k127_1578220_5 Putative Fe-S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000009777 224.0
MMS3_k127_1578220_6 Domain of unknown function (DUF3482) - - - 0.00000000000000000000000000000000000000000000000000008373 195.0
MMS3_k127_1578220_7 regulatory protein, arsR K03892 - - 0.000000000000000000000000000000000000000000966 159.0
MMS3_k127_1578220_8 Thioredoxin domain - - - 0.0000000000000000000000000002728 115.0
MMS3_k127_1578578_0 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 1.251e-229 715.0
MMS3_k127_1578578_1 Amidohydrolase family - - - 0.0000000001797 64.0
MMS3_k127_1582965_0 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 425.0
MMS3_k127_1582965_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 357.0
MMS3_k127_1582965_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 310.0
MMS3_k127_1582965_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000001842 213.0
MMS3_k127_158481_0 Subunit ChlI of Mg-chelatase K01338 - 3.4.21.53 1.088e-262 824.0
MMS3_k127_158481_1 Nucleoside recognition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 499.0
MMS3_k127_158491_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.002e-214 682.0
MMS3_k127_158491_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000003843 221.0
MMS3_k127_158491_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000002071 108.0
MMS3_k127_158491_3 TIGRFAM phosphocarrier, HPr family K11189 - - 0.0000000000000000000004941 98.0
MMS3_k127_1585096_0 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 495.0
MMS3_k127_1585096_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002357 254.0
MMS3_k127_1585096_2 PAS domain K02488 - 2.7.7.65 0.000000000000000000000000000000000000497 160.0
MMS3_k127_1586621_0 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000004725 226.0
MMS3_k127_1586621_1 Uncharacterized ACR, COG1993 - - - 0.000000000000000000000000000000000000000000000000000000000001323 211.0
MMS3_k127_1586621_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000002218 182.0
MMS3_k127_1586621_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000003961 176.0
MMS3_k127_1586621_4 phosphoribosyl-ATP diphosphatase activity K01523,K01814,K11755 GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 0.0000000000000000000000000000000002247 133.0
MMS3_k127_1586943_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1092.0
MMS3_k127_1586943_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 1.457e-230 719.0
MMS3_k127_1586943_2 PFAM sodium neurotransmitter symporter K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 565.0
MMS3_k127_1586943_3 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 471.0
MMS3_k127_1586943_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003918 260.0
MMS3_k127_1586943_5 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000002091 142.0
MMS3_k127_1586943_6 Domain of unknown function (DUF4445) - - - 0.000000000000000008043 84.0
MMS3_k127_1591039_0 Belongs to the thiolase family K00626 - 2.3.1.9 9.599e-220 687.0
MMS3_k127_1591039_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 333.0
MMS3_k127_1591039_2 Putative exonuclease, RdgC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003302 246.0
MMS3_k127_1591039_3 May be involved in recombination - - - 0.00000000000000000000000000000000000000000000000000000000000007444 218.0
MMS3_k127_1591039_4 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000000000000000000000000000000000002778 205.0
MMS3_k127_1591039_5 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000003507 99.0
MMS3_k127_1591039_6 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000008322 99.0
MMS3_k127_1592589_0 PFAM CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 2.217e-307 956.0
MMS3_k127_1592589_1 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 1.829e-249 780.0
MMS3_k127_1592589_10 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000008277 220.0
MMS3_k127_1592589_11 SAM-dependent RNA methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000001229 206.0
MMS3_k127_1592589_12 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000001519 211.0
MMS3_k127_1592589_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000002831 166.0
MMS3_k127_1592589_14 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000004757 171.0
MMS3_k127_1592589_15 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000254 158.0
MMS3_k127_1592589_16 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000002507 144.0
MMS3_k127_1592589_17 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000002358 133.0
MMS3_k127_1592589_18 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000005759 134.0
MMS3_k127_1592589_19 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000000002619 130.0
MMS3_k127_1592589_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 8.743e-211 662.0
MMS3_k127_1592589_3 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 445.0
MMS3_k127_1592589_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 407.0
MMS3_k127_1592589_5 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 336.0
MMS3_k127_1592589_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 308.0
MMS3_k127_1592589_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003023 280.0
MMS3_k127_1592589_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005599 247.0
MMS3_k127_1592589_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000002573 241.0
MMS3_k127_1604610_0 PFAM 2-nitropropane dioxygenase NPD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 573.0
MMS3_k127_1604610_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 347.0
MMS3_k127_1604610_2 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000005579 198.0
MMS3_k127_1604610_3 - - - - 0.000000008293 61.0
MMS3_k127_1616087_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 539.0
MMS3_k127_1616087_1 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 485.0
MMS3_k127_1616087_2 PFAM PEBP family protein K06910 - - 0.000000000000000000000000000000000000002031 147.0
MMS3_k127_1640854_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 308.0
MMS3_k127_1640854_1 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001226 222.0
MMS3_k127_1640854_2 PFAM UBA THIF-type NAD FAD binding - - - 0.000000000000000000000000000000001901 135.0
MMS3_k127_1640854_3 Rubrerythrin - - - 0.0000000000000000000004243 101.0
MMS3_k127_1649409_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 3.549e-231 736.0
MMS3_k127_1649409_1 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 605.0
MMS3_k127_1649409_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 416.0
MMS3_k127_1649409_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000006826 221.0
MMS3_k127_1649409_4 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.000000000000000000000004499 104.0
MMS3_k127_1649409_5 PhoQ Sensor - - - 0.00000000000000006554 81.0
MMS3_k127_1667597_0 family UPF0324 - - - 8.608e-217 684.0
MMS3_k127_1667597_1 membrane transporter protein K07090 - - 2.262e-205 646.0
MMS3_k127_1667597_2 chitin binding K07407 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 419.0
MMS3_k127_1667597_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 355.0
MMS3_k127_1667597_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009561 258.0
MMS3_k127_1667597_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003512 256.0
MMS3_k127_1667597_6 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K15327,K15329,K15469 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000003376 198.0
MMS3_k127_1667597_7 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000213 139.0
MMS3_k127_1672044_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1347.0
MMS3_k127_1672044_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 490.0
MMS3_k127_1672044_10 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000008515 130.0
MMS3_k127_1672044_11 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000001652 124.0
MMS3_k127_1672044_12 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000003713 116.0
MMS3_k127_1672044_13 FAD dependent oxidoreductase - - - 0.0000000000000000000000000005665 113.0
MMS3_k127_1672044_2 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 477.0
MMS3_k127_1672044_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 480.0
MMS3_k127_1672044_4 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 378.0
MMS3_k127_1672044_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 353.0
MMS3_k127_1672044_6 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000333 203.0
MMS3_k127_1672044_7 helix_turn_helix, Lux Regulon K02479 - - 0.00000000000000000000000000000000000000000000000000000003608 203.0
MMS3_k127_1672044_8 helix_turn_helix, Lux Regulon K02479 - - 0.0000000000000000000000000000000000000000000000005068 184.0
MMS3_k127_1672044_9 PFAM thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000000000000006138 179.0
MMS3_k127_1677844_0 Dynamin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 628.0
MMS3_k127_1677844_1 PFAM Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 533.0
MMS3_k127_1677844_2 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 482.0
MMS3_k127_1677844_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000003826 238.0
MMS3_k127_1677844_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000006789 207.0
MMS3_k127_1677844_5 HemY protein - - - 0.00000000000000000000000000000000000000000000000000003304 197.0
MMS3_k127_1677844_6 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000003725 160.0
MMS3_k127_1677844_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000000284 100.0
MMS3_k127_1677844_8 - - - - 0.0000000000008206 70.0
MMS3_k127_1685981_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 1.064e-216 728.0
MMS3_k127_1685981_1 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000001736 219.0
MMS3_k127_1685981_10 - - - - 0.00001406 53.0
MMS3_k127_1685981_11 type IV pilus modification protein PilV K02671,K02681,K10927 - - 0.00009807 51.0
MMS3_k127_1685981_2 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000005274 207.0
MMS3_k127_1685981_3 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000000000003373 175.0
MMS3_k127_1685981_4 - - - - 0.000000000000000000000000000003187 129.0
MMS3_k127_1685981_5 Pfam:N_methyl_2 - - - 0.000000000000000000000001597 112.0
MMS3_k127_1685981_6 domain-containing protein K16726 GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 - 0.000000000000000000000001878 112.0
MMS3_k127_1685981_8 Type II transport protein GspH K08084 - - 0.00000000005182 70.0
MMS3_k127_1728611_0 DEAD DEAH box helicase - - - 2e-272 856.0
MMS3_k127_1728611_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008465 517.0
MMS3_k127_1728611_2 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 390.0
MMS3_k127_1728611_3 PFAM peptidase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 291.0
MMS3_k127_1728611_4 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000004025 215.0
MMS3_k127_1760557_0 PFAM AMP-dependent synthetase and ligase K01907 - 6.2.1.16 2e-322 996.0
MMS3_k127_1760557_1 Carboxyl transferase domain K01969,K13778 - 6.4.1.4,6.4.1.5 3.919e-277 859.0
MMS3_k127_1760557_10 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 298.0
MMS3_k127_1760557_11 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 289.0
MMS3_k127_1760557_12 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 293.0
MMS3_k127_1760557_13 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000003967 195.0
MMS3_k127_1760557_14 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000007306 165.0
MMS3_k127_1760557_15 - - - - 0.00000000000000000004505 91.0
MMS3_k127_1760557_2 HMGL-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 574.0
MMS3_k127_1760557_3 AsmA-like C-terminal region K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 590.0
MMS3_k127_1760557_4 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 552.0
MMS3_k127_1760557_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 542.0
MMS3_k127_1760557_6 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 387.0
MMS3_k127_1760557_7 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 379.0
MMS3_k127_1760557_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 348.0
MMS3_k127_1760557_9 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 324.0
MMS3_k127_1775340_0 NAD dependent epimerase/dehydratase family K06118 - 3.13.1.1 1.776e-198 625.0
MMS3_k127_1775340_1 PFAM Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 465.0
MMS3_k127_1775340_2 TIGRFAM nucleotidyltransferase substrate binding protein, HI0074 family - - - 0.000000000000000000000000005198 111.0
MMS3_k127_1783426_0 AIR synthase related protein, N-terminal domain K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 525.0
MMS3_k127_1783426_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 509.0
MMS3_k127_1783426_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 456.0
MMS3_k127_1783426_3 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.000000000000000000000000000000000000000000000000000000001003 207.0
MMS3_k127_1783426_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000009947 81.0
MMS3_k127_1783426_5 - - - - 0.00000546 48.0
MMS3_k127_1788653_0 PFAM Nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 1.513e-196 622.0
MMS3_k127_1788653_1 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 487.0
MMS3_k127_1788653_2 hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 468.0
MMS3_k127_1788653_3 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 402.0
MMS3_k127_1788653_4 PFAM NADH ubiquinone K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 392.0
MMS3_k127_1788653_5 TIGRFAM hydrogenase maturation protease K00442 - - 0.00000000000000000000000000000000000000000000000002318 183.0
MMS3_k127_1799084_0 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 371.0
MMS3_k127_1799084_1 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000007858 196.0
MMS3_k127_1799084_2 MASE2 domain - - - 0.000000000000000000000000000000005076 149.0
MMS3_k127_1802340_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1088.0
MMS3_k127_1802340_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.918e-218 685.0
MMS3_k127_1802340_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006721 400.0
MMS3_k127_1802340_3 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 386.0
MMS3_k127_1802340_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002285 273.0
MMS3_k127_1804178_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.967e-228 714.0
MMS3_k127_1804178_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.019e-222 698.0
MMS3_k127_1804178_10 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000001218 88.0
MMS3_k127_1804178_11 Sporulation related domain - - - 0.00000000006939 71.0
MMS3_k127_1804178_12 - - - - 0.0000000002237 65.0
MMS3_k127_1804178_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 617.0
MMS3_k127_1804178_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 536.0
MMS3_k127_1804178_4 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 536.0
MMS3_k127_1804178_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 421.0
MMS3_k127_1804178_6 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 386.0
MMS3_k127_1804178_7 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 324.0
MMS3_k127_1804178_8 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000001029 180.0
MMS3_k127_1804178_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000002125 114.0
MMS3_k127_1811450_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 520.0
MMS3_k127_1811450_1 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 423.0
MMS3_k127_1811450_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 345.0
MMS3_k127_1811450_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000005476 206.0
MMS3_k127_1811450_4 AAA domain K07321 - - 0.000000000000000000000000000000000000000001622 169.0
MMS3_k127_1811450_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000001759 98.0
MMS3_k127_1811450_7 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 0.000000213 53.0
MMS3_k127_184477_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 1.022e-196 624.0
MMS3_k127_184477_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 550.0
MMS3_k127_184477_2 cellulase activity - - - 0.000000001889 65.0
MMS3_k127_1845601_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 430.0
MMS3_k127_1845601_1 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 419.0
MMS3_k127_1845601_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 413.0
MMS3_k127_1845601_3 phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 421.0
MMS3_k127_1845601_4 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 291.0
MMS3_k127_1845601_5 Signal transduction histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000004277 186.0
MMS3_k127_1846925_0 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 406.0
MMS3_k127_1846925_1 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 307.0
MMS3_k127_1846925_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002376 263.0
MMS3_k127_1846925_3 Putative molybdenum carrier - - - 0.000000000000000000000000000000000000000000000000001824 188.0
MMS3_k127_1847248_0 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 566.0
MMS3_k127_1847248_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 333.0
MMS3_k127_1847248_2 intermembrane phospholipid transfer K07323 - - 0.00000000000000000000000000000000003146 142.0
MMS3_k127_1847248_3 B12 binding domain - - - 0.000001497 53.0
MMS3_k127_1859177_0 acyl-CoA dehydrogenase K09456 - - 6.203e-285 885.0
MMS3_k127_1859177_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 6.464e-255 794.0
MMS3_k127_1859177_2 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 352.0
MMS3_k127_1859177_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 301.0
MMS3_k127_1859177_4 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001353 273.0
MMS3_k127_1859177_5 Tetracycline transcriptional regulator YsiA domain protein K13770 - - 0.00000000000000000000000000000000000000000000000000000000000000003255 229.0
MMS3_k127_1859177_7 4Fe-4S dicluster domain - - - 0.00000000000000000006381 91.0
MMS3_k127_1859177_8 Hsp20/alpha crystallin family K13993 - - 0.000000000000000001174 93.0
MMS3_k127_1861923_0 Poxvirus D5 protein-like K06919 - - 3.334e-242 771.0
MMS3_k127_1861923_1 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 479.0
MMS3_k127_1861923_2 Terminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 355.0
MMS3_k127_1861923_3 - - - - 0.0000000000000000000000000000000000001627 150.0
MMS3_k127_1861923_5 Helix-turn-helix domain - - - 0.000005702 51.0
MMS3_k127_1865569_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1150.0
MMS3_k127_1865569_1 Biotin carboxylase - - - 1.329e-225 704.0
MMS3_k127_1865569_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 578.0
MMS3_k127_1865569_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 529.0
MMS3_k127_1865569_4 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 426.0
MMS3_k127_1865569_5 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 396.0
MMS3_k127_1865569_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.000000000000000000000000000000000000000000000000000000006747 204.0
MMS3_k127_1865569_7 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.00000000001744 64.0
MMS3_k127_187119_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 581.0
MMS3_k127_187119_1 TonB dependent receptor K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 567.0
MMS3_k127_187119_10 Cobalt transport protein K16785 - - 0.000000000000000000000000000000000000000000000001235 183.0
MMS3_k127_187119_11 - - - - 0.000000000000000000000000000000000000000000001094 171.0
MMS3_k127_187119_12 - - - - 0.00000000000000006554 82.0
MMS3_k127_187119_2 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 495.0
MMS3_k127_187119_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 450.0
MMS3_k127_187119_4 ABC transporter K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 380.0
MMS3_k127_187119_5 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 315.0
MMS3_k127_187119_6 PFAM Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 306.0
MMS3_k127_187119_7 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001878 279.0
MMS3_k127_187119_8 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004401 240.0
MMS3_k127_187119_9 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000502 207.0
MMS3_k127_1874849_0 HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide K00333,K12142,K14090,K15830 GO:0003674,GO:0005488,GO:0016151,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 461.0
MMS3_k127_1874849_1 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006464 441.0
MMS3_k127_1874849_2 HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide K12138,K12139,K15829 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0033554,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 365.0
MMS3_k127_1874849_3 PFAM NADH Ubiquinone plastoquinone K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 364.0
MMS3_k127_1874849_4 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 334.0
MMS3_k127_1874849_5 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000155 250.0
MMS3_k127_1874849_6 Hydrogenase 4 membrane K12140 GO:0008150,GO:0040007 - 0.0000000000000000000000000008108 121.0
MMS3_k127_1877062_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1234.0
MMS3_k127_1877062_1 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 4.804e-264 825.0
MMS3_k127_1877062_2 PFAM response regulator receiver K02481,K07712 - - 6.209e-212 668.0
MMS3_k127_1877062_3 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 487.0
MMS3_k127_1877062_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 343.0
MMS3_k127_1877062_5 Pyridoxamine 5'-phosphate oxidase K09979 - - 0.000000000000000000000008127 109.0
MMS3_k127_1877523_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.172e-235 737.0
MMS3_k127_1877523_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.032e-223 705.0
MMS3_k127_1877523_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000003025 242.0
MMS3_k127_1887928_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007664 328.0
MMS3_k127_1887928_1 - - - - 0.0000000000002715 74.0
MMS3_k127_1887928_2 NlpC/P60 family K21471 - - 0.00000000002168 71.0
MMS3_k127_1887928_3 - - - - 0.0002488 47.0
MMS3_k127_1887928_4 - - - - 0.0008324 47.0
MMS3_k127_1898404_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 362.0
MMS3_k127_1898404_1 ThiF family K03148 - 2.7.7.73 0.0000000000000000000000000000000000000000000000000000000007182 212.0
MMS3_k127_1898404_2 - - - - 0.000000000000000000000000002417 121.0
MMS3_k127_1898404_3 EamA-like transporter family - - - 0.0000000000000000002219 89.0
MMS3_k127_1898404_4 Mut7-C ubiquitin - - - 0.000000000001815 71.0
MMS3_k127_1904525_0 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 584.0
MMS3_k127_1904525_1 PFAM Radical SAM domain protein K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 539.0
MMS3_k127_1904525_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 539.0
MMS3_k127_1904525_3 Methyltransferase, type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 417.0
MMS3_k127_1904525_4 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006021 265.0
MMS3_k127_1904525_5 Acetyltransferase (GNAT) family K06977 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000135 215.0
MMS3_k127_1904525_6 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000007852 203.0
MMS3_k127_190544_0 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 5.753e-243 761.0
MMS3_k127_190544_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K02482 - 2.7.13.3 0.0000000000000000000000000000000000000003032 164.0
MMS3_k127_190544_2 Sporulation related domain - - - 0.000000000002433 77.0
MMS3_k127_1914672_0 PFAM Formylmethanofuran dehydrogenase, subunit E region K11261 - 1.2.7.12 2.258e-222 702.0
MMS3_k127_1914672_1 PFAM DAHP synthetase I K03856,K04516 - 2.5.1.54,5.4.99.5 3.647e-204 645.0
MMS3_k127_1914672_2 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 544.0
MMS3_k127_1914672_3 4Fe-4S ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 320.0
MMS3_k127_1914672_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000362 269.0
MMS3_k127_1914672_5 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000003982 179.0
MMS3_k127_1915730_0 PFAM formate C-acetyltransferase glycine radical K00656,K20038 - 2.3.1.54,4.3.99.4 0.0 1166.0
MMS3_k127_1915730_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 293.0
MMS3_k127_1915730_2 Pyridine nucleotide-disulfide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 292.0
MMS3_k127_1915730_3 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001595 244.0
MMS3_k127_1915730_4 WHG domain - - - 0.00000000000000000000000000000000000002356 152.0
MMS3_k127_1915983_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 1.223e-210 671.0
MMS3_k127_1915983_1 PFAM Pyruvoyl-dependent arginine decarboxylase K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003222 273.0
MMS3_k127_1915983_2 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000000000000000000000000005372 169.0
MMS3_k127_1915983_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000000000000000000005013 159.0
MMS3_k127_1915983_4 - - - - 0.00000000000002592 76.0
MMS3_k127_1915983_5 Sigma-54 interaction domain - - - 0.0007178 45.0
MMS3_k127_1930992_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 0.0 1604.0
MMS3_k127_1930992_1 PFAM molybdopterin oxidoreductase K00336,K05299 - 1.17.1.10,1.6.5.3 2.181e-285 902.0
MMS3_k127_1930992_2 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008689 507.0
MMS3_k127_1930992_3 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 458.0
MMS3_k127_1930992_4 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 328.0
MMS3_k127_1930992_5 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 309.0
MMS3_k127_1930992_6 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000007786 239.0
MMS3_k127_1930992_7 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000005349 160.0
MMS3_k127_193997_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 565.0
MMS3_k127_1951597_0 Hydantoinaseoxoprolinase domain protein - - - 7.028e-195 623.0
MMS3_k127_1951597_1 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 538.0
MMS3_k127_1951597_2 PFAM Pterin binding enzyme K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 392.0
MMS3_k127_1951597_3 Protein of unknown function (DUF1638) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002918 253.0
MMS3_k127_1951597_4 ACT domain - - - 0.0000000000000000000000000000000000000002645 155.0
MMS3_k127_1951597_5 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000008676 129.0
MMS3_k127_1952941_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.0000000000000000000000000000000000000000000000000002984 191.0
MMS3_k127_1952941_1 acetyl-CoA catabolic process K00197,K00226,K08941,K17723 - 1.3.1.1,1.3.98.1,2.1.1.245 0.0000000000000000000000000000000000000000000000000004279 198.0
MMS3_k127_1952941_2 methyltransferase K03183,K05929 - 2.1.1.103,2.1.1.163,2.1.1.201 0.0000000000000000000007265 104.0
MMS3_k127_1953288_0 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 563.0
MMS3_k127_1953288_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 525.0
MMS3_k127_1953288_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 426.0
MMS3_k127_1953288_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 400.0
MMS3_k127_1953288_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 344.0
MMS3_k127_1953288_5 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 329.0
MMS3_k127_1953288_6 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001269 259.0
MMS3_k127_1954788_0 anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1118.0
MMS3_k127_1954788_1 PFAM type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 601.0
MMS3_k127_1954788_10 YGGT family K02221 - - 0.0000000000000000000000000000000001965 134.0
MMS3_k127_1954788_11 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000001925 132.0
MMS3_k127_1954788_12 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000004234 82.0
MMS3_k127_1954788_13 - - - - 0.000000003675 60.0
MMS3_k127_1954788_2 PFAM type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 592.0
MMS3_k127_1954788_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 366.0
MMS3_k127_1954788_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 316.0
MMS3_k127_1954788_5 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005605 269.0
MMS3_k127_1954788_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001047 258.0
MMS3_k127_1954788_7 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000003908 223.0
MMS3_k127_1954788_8 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000005045 181.0
MMS3_k127_1954788_9 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000001244 164.0
MMS3_k127_1956303_0 Protein of unknown function (DUF2868) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 422.0
MMS3_k127_1956303_1 GHKL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 396.0
MMS3_k127_1956303_2 Domain of unknown function (DUF3482) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 362.0
MMS3_k127_1956303_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 368.0
MMS3_k127_1956303_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 310.0
MMS3_k127_1956303_5 PHP-associated - - - 0.0000000000000000000000000000000001278 145.0
MMS3_k127_1956389_0 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 558.0
MMS3_k127_1956389_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 505.0
MMS3_k127_1956389_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 493.0
MMS3_k127_1956389_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 415.0
MMS3_k127_1956389_4 Protein of unknown function (DUF3795) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 293.0
MMS3_k127_1956389_5 PFAM ATP-binding region - - - 0.0000000000004809 71.0
MMS3_k127_1956389_6 5'-nucleotidase, C-terminal domain K01081,K07004,K08693,K11751 - 3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45 0.000006212 59.0
MMS3_k127_1956389_7 Helix-turn-helix domain - - - 0.0003405 46.0
MMS3_k127_1959612_0 pfam abc-1 K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 593.0
MMS3_k127_1959612_1 Acetyl-CoA dehydrogenase C-terminal like K09456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 582.0
MMS3_k127_1959612_10 - - - - 0.00000000000000000007381 94.0
MMS3_k127_1959612_2 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 396.0
MMS3_k127_1959612_3 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 355.0
MMS3_k127_1959612_4 Pyruvate kinase, alpha/beta domain K09126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001008 283.0
MMS3_k127_1959612_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001046 274.0
MMS3_k127_1959612_6 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005375 248.0
MMS3_k127_1959612_7 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.0000000000000000000000000000000000000000000000000000000000000007563 226.0
MMS3_k127_1959612_8 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000155 219.0
MMS3_k127_1959612_9 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000000000000001059 106.0
MMS3_k127_2030406_0 COGs COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001533 267.0
MMS3_k127_2030406_1 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000004841 118.0
MMS3_k127_203667_0 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 571.0
MMS3_k127_203667_1 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 442.0
MMS3_k127_203667_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000001792 149.0
MMS3_k127_203667_3 2Fe-2S iron-sulfur cluster binding domain K00123 - 1.17.1.9 0.00000000000000000000000000000000000000876 152.0
MMS3_k127_203667_4 4Fe-4S dicluster domain K00196 - - 0.00000000000000000000000000000000001509 140.0
MMS3_k127_203667_5 Rhodanese Homology Domain - - - 0.0000000000000000000000000003637 117.0
MMS3_k127_203667_6 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000001819 61.0
MMS3_k127_2041643_0 Insulinase (Peptidase family M16) K07263 - - 6.136e-197 627.0
MMS3_k127_2041643_1 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000008592 244.0
MMS3_k127_2053055_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 6.941e-247 772.0
MMS3_k127_2053055_1 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 571.0
MMS3_k127_2053055_10 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000001263 211.0
MMS3_k127_2053055_11 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.00000000000000000000000000000000000000000000000000000000007433 207.0
MMS3_k127_2053055_12 PFAM Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000001257 205.0
MMS3_k127_2053055_13 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000005943 177.0
MMS3_k127_2053055_14 Protein of unknown function (DUF3373) - - - 0.00000000000000000000000000000000000003394 162.0
MMS3_k127_2053055_15 - - - - 0.000000000000000000000826 102.0
MMS3_k127_2053055_16 Type II secretion system protein B K02451 - - 0.000000001686 68.0
MMS3_k127_2053055_2 S-adenosylmethionine-dependent methyltransferase K06969,K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.191,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 502.0
MMS3_k127_2053055_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 468.0
MMS3_k127_2053055_4 PFAM Peptidoglycan-binding domain 1 protein K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 434.0
MMS3_k127_2053055_5 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458 346.0
MMS3_k127_2053055_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 325.0
MMS3_k127_2053055_7 Domain of unknown function (DUF4872) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 314.0
MMS3_k127_2053055_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 300.0
MMS3_k127_2053055_9 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 294.0
MMS3_k127_2062631_0 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 469.0
MMS3_k127_2062631_1 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 397.0
MMS3_k127_2062631_2 Rubredoxin - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000001421 104.0
MMS3_k127_2065719_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 4.124e-314 994.0
MMS3_k127_2065719_1 Cache domain K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000777 617.0
MMS3_k127_2065719_10 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000158 45.0
MMS3_k127_2065719_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 563.0
MMS3_k127_2065719_3 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 461.0
MMS3_k127_2065719_4 response regulator - - - 0.000000000000000000000000000000000000000000000000000000001177 206.0
MMS3_k127_2065719_5 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.00000000000000000000000000000000000000001244 162.0
MMS3_k127_2065719_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000001939 148.0
MMS3_k127_2065719_7 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000002255 126.0
MMS3_k127_2065719_8 - - - - 0.000000000000000000006437 97.0
MMS3_k127_2065719_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000003168 72.0
MMS3_k127_2084608_0 response regulator receiver - - - 3.413e-217 686.0
MMS3_k127_2084608_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 516.0
MMS3_k127_2084608_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 413.0
MMS3_k127_2084608_3 - - - - 0.00009277 45.0
MMS3_k127_2099056_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.499e-210 667.0
MMS3_k127_2099056_1 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 577.0
MMS3_k127_2099056_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 569.0
MMS3_k127_2099056_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 491.0
MMS3_k127_2099056_4 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 319.0
MMS3_k127_2099056_5 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000007395 204.0
MMS3_k127_2099056_6 Predicted membrane protein (DUF2232) - - - 0.000000000001843 68.0
MMS3_k127_2107270_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 8.804e-260 809.0
MMS3_k127_2107270_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 597.0
MMS3_k127_2107270_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009551 280.0
MMS3_k127_2107270_3 PFAM peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000003115 199.0
MMS3_k127_2107270_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000001883 175.0
MMS3_k127_2111911_0 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 5.611e-277 866.0
MMS3_k127_2111911_1 drug resistance transporter, EmrB QacA subfamily K03446 - - 4.432e-219 691.0
MMS3_k127_2111911_2 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 424.0
MMS3_k127_2111911_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009699 443.0
MMS3_k127_2111911_4 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 373.0
MMS3_k127_2111911_5 Biotin-lipoyl like K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 371.0
MMS3_k127_2111911_6 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 361.0
MMS3_k127_2111911_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004031 245.0
MMS3_k127_2111911_8 Psort location Cytoplasmic, score K00945,K01812,K16139 - 2.7.4.25,5.3.1.12 0.0000000000000000000000000000000000000000000000000000000001033 213.0
MMS3_k127_2111911_9 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000839 189.0
MMS3_k127_2125375_0 Lysylphosphatidylglycerol synthase TM region K07027,K14205 - 2.3.2.3 3.745e-285 899.0
MMS3_k127_2125375_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 5.625e-230 728.0
MMS3_k127_2125375_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 466.0
MMS3_k127_2125375_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 407.0
MMS3_k127_2125375_4 Alcohol dehydrogenase class IV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 410.0
MMS3_k127_2130126_0 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.0 1030.0
MMS3_k127_2130126_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 449.0
MMS3_k127_2130126_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 450.0
MMS3_k127_2130126_3 Activates fatty acids by binding to coenzyme A K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 327.0
MMS3_k127_2130126_4 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000005839 154.0
MMS3_k127_2130189_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 400.0
MMS3_k127_2130189_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 384.0
MMS3_k127_2130189_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 325.0
MMS3_k127_2130189_3 Glycosyltransferase family 9 (heptosyltransferase) K12982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 291.0
MMS3_k127_2130189_4 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000002665 175.0
MMS3_k127_2130189_5 protein kinase activity K11211 - 2.7.1.166 0.0000000000000000000000000000000000000006496 157.0
MMS3_k127_2130189_6 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000002231 130.0
MMS3_k127_2130189_7 O-Antigen ligase K02847 - - 0.0000000000000000000000001032 121.0
MMS3_k127_2130189_8 Galactose-3-O-sulfotransferase - - - 0.000000000000000000002824 104.0
MMS3_k127_2149768_0 CoA binding domain K01905 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005593 578.0
MMS3_k127_2149768_1 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 391.0
MMS3_k127_2149768_2 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001407 251.0
MMS3_k127_215310_0 prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 467.0
MMS3_k127_215310_1 Alpha/beta hydrolase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 391.0
MMS3_k127_215310_2 and a GGDEF domain' - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 385.0
MMS3_k127_215310_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 308.0
MMS3_k127_215310_4 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002481 271.0
MMS3_k127_215310_5 PFAM phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000004464 239.0
MMS3_k127_215310_6 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000005511 214.0
MMS3_k127_215310_7 Response regulator receiver - - - 0.00000000000000000000000000005926 135.0
MMS3_k127_215310_8 YsiA-like protein, C-terminal region - - - 0.00000000001328 65.0
MMS3_k127_2155985_0 DEAD DEAH box helicase K06877 - - 0.0 1212.0
MMS3_k127_2155985_1 Domain of unknown function (DUF3369) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000236 258.0
MMS3_k127_2155985_2 DNA polymerase III, delta' K02340 - 2.7.7.7 0.00000004705 55.0
MMS3_k127_2158247_0 chelatase, subunit ChlI K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 415.0
MMS3_k127_2158247_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 393.0
MMS3_k127_2172234_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.727e-299 934.0
MMS3_k127_2172234_1 Cellulose 1,4-beta-cellobiosidase - - - 0.00000000000000000000000000000000000000000000000000000000005109 213.0
MMS3_k127_2172234_2 Iron (Metal) dependent repressor, DtxR family K03709 - - 0.00000000000000000000000000000000000000000000008811 174.0
MMS3_k127_2172234_3 PFAM FeoA K04758 - - 0.000000000000000000000000001094 115.0
MMS3_k127_2172234_4 Virus attachment protein p12 family - - - 0.0002197 47.0
MMS3_k127_2172856_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 602.0
MMS3_k127_2172856_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 391.0
MMS3_k127_2172856_10 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000002779 77.0
MMS3_k127_2172856_11 peptidyl-tyrosine sulfation - - - 0.000000002107 64.0
MMS3_k127_2172856_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 365.0
MMS3_k127_2172856_3 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 358.0
MMS3_k127_2172856_4 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 363.0
MMS3_k127_2172856_5 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 321.0
MMS3_k127_2172856_6 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 297.0
MMS3_k127_2172856_7 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003238 291.0
MMS3_k127_2172856_8 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000001914 173.0
MMS3_k127_2172856_9 PFAM CheW domain protein K03408 - - 0.000000000000000000000000005886 117.0
MMS3_k127_2174131_0 4Fe-4S dicluster domain - - - 1.017e-301 930.0
MMS3_k127_2174131_1 class II (D K and N) K01893 - 6.1.1.22 1.263e-207 656.0
MMS3_k127_2174131_10 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000005282 153.0
MMS3_k127_2174131_11 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000007883 143.0
MMS3_k127_2174131_12 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000005773 120.0
MMS3_k127_2174131_13 - - - - 0.000000000000000000000000002637 117.0
MMS3_k127_2174131_14 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000261 53.0
MMS3_k127_2174131_15 - - - - 0.000000297 59.0
MMS3_k127_2174131_16 LTXXQ motif family protein - - - 0.00005329 50.0
MMS3_k127_2174131_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 556.0
MMS3_k127_2174131_3 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 431.0
MMS3_k127_2174131_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 429.0
MMS3_k127_2174131_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 348.0
MMS3_k127_2174131_6 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 335.0
MMS3_k127_2174131_7 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 336.0
MMS3_k127_2174131_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000011 224.0
MMS3_k127_2174131_9 - - - - 0.000000000000000000000000000000000000000000001159 168.0
MMS3_k127_2179535_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 353.0
MMS3_k127_2179535_1 NUBPL iron-transfer P-loop NTPase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008683 253.0
MMS3_k127_2179535_2 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000001542 139.0
MMS3_k127_2179535_3 TonB C terminal K03832 - - 0.000000000000000136 81.0
MMS3_k127_2179535_4 Putative zinc-finger - - - 0.0004768 49.0
MMS3_k127_2185449_0 type II secretion system protein E K02454 - - 4.419e-228 720.0
MMS3_k127_2185449_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 368.0
MMS3_k127_2185449_2 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000001182 220.0
MMS3_k127_2185449_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000008756 207.0
MMS3_k127_2185449_4 SMART Tetratricopeptide - - - 0.0000000000000000000000002984 111.0
MMS3_k127_2198205_0 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 445.0
MMS3_k127_2203252_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1079.0
MMS3_k127_2203252_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.015e-207 651.0
MMS3_k127_2203252_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 335.0
MMS3_k127_2203252_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 322.0
MMS3_k127_2204618_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.813e-292 910.0
MMS3_k127_2204618_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.093e-238 745.0
MMS3_k127_2204618_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 7.125e-228 716.0
MMS3_k127_2204618_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 475.0
MMS3_k127_2204618_4 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 441.0
MMS3_k127_2204618_5 signal peptide peptidase SppA K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 326.0
MMS3_k127_2204618_6 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 321.0
MMS3_k127_2204618_7 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008434 280.0
MMS3_k127_2204618_8 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000001158 261.0
MMS3_k127_2204618_9 Cytochrome b subunit of the bc complex K15879 - - 0.000001046 53.0
MMS3_k127_2212215_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 8.694e-255 799.0
MMS3_k127_2212215_1 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 6.198e-216 683.0
MMS3_k127_2212215_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 396.0
MMS3_k127_2212215_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007791 254.0
MMS3_k127_2212215_4 TIGRFAM sugar-phosphate isomerases, RpiB LacA LacB family K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000008449 204.0
MMS3_k127_2214325_0 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 1.994e-282 873.0
MMS3_k127_2214325_1 Biotin carboxylase C-terminal domain K01965,K01968 - 6.4.1.3,6.4.1.4 3.082e-210 669.0
MMS3_k127_2214325_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 439.0
MMS3_k127_2214325_3 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 342.0
MMS3_k127_2214325_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000002234 219.0
MMS3_k127_2214325_5 metal cluster binding K06940 - - 0.0000000000000000000000000000000000000000000006163 168.0
MMS3_k127_2214325_6 Domain of unknown function (DUF4875) - - - 0.00005221 53.0
MMS3_k127_2224449_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 7.523e-202 637.0
MMS3_k127_2224449_1 PFAM metal-dependent phosphohydrolase HD sub - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 347.0
MMS3_k127_2224449_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 325.0
MMS3_k127_2224449_3 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006778 247.0
MMS3_k127_2224449_4 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000002302 163.0
MMS3_k127_2235307_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 3.3e-276 861.0
MMS3_k127_2235307_1 PFAM Radical SAM domain protein K07139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 427.0
MMS3_k127_2235307_2 heat shock protein DnaJ domain protein K03686,K05516 - - 0.00000000000000000000000000000000000000009141 154.0
MMS3_k127_2240461_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 9.862e-294 910.0
MMS3_k127_2240461_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 3.943e-218 698.0
MMS3_k127_2240461_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000007531 228.0
MMS3_k127_2240461_3 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
MMS3_k127_2247854_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1111.0
MMS3_k127_2247854_1 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 4.417e-296 918.0
MMS3_k127_2247854_2 Acyl-CoA synthetase AMP-acid ligase K01895 - 6.2.1.1 3.81e-218 691.0
MMS3_k127_2247854_3 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 413.0
MMS3_k127_2247854_4 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.00000000000000000000000002524 117.0
MMS3_k127_2257016_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 1.366e-286 896.0
MMS3_k127_2257016_1 PFAM Starch synthase catalytic K00703,K01176 - 2.4.1.21,3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 424.0
MMS3_k127_2257016_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 359.0
MMS3_k127_2257016_3 PFAM GAF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 319.0
MMS3_k127_2257016_4 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001277 275.0
MMS3_k127_2257016_5 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000003598 238.0
MMS3_k127_2257016_6 dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000288 97.0
MMS3_k127_2257016_7 Domain of unknown function (DUF4203) - - - 0.000000000000000009116 89.0
MMS3_k127_2257016_8 - - - - 0.0000000000000003509 81.0
MMS3_k127_2278143_0 ATPase BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 474.0
MMS3_k127_2278143_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008622 426.0
MMS3_k127_2278143_2 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 341.0
MMS3_k127_2278143_3 ABC transporter, ATP-binding protein K06147 - - 0.0000000000002301 79.0
MMS3_k127_2280450_0 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 492.0
MMS3_k127_2280450_1 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 471.0
MMS3_k127_2280450_2 PFAM GHMP kinase K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 417.0
MMS3_k127_2287190_0 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 411.0
MMS3_k127_2287190_1 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004347 243.0
MMS3_k127_2287190_2 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000001082 238.0
MMS3_k127_2302862_0 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 5.933e-317 974.0
MMS3_k127_2302862_1 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 603.0
MMS3_k127_2302862_2 glutamate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006125 288.0
MMS3_k127_2317626_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.894e-204 641.0
MMS3_k127_2317626_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.532e-200 633.0
MMS3_k127_2317626_10 Capsular polysaccharide synthesis protein - - - 0.0000453 55.0
MMS3_k127_2317626_2 UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 593.0
MMS3_k127_2317626_3 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 320.0
MMS3_k127_2317626_4 UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000007264 223.0
MMS3_k127_2317626_5 DsrE/DsrF-like family K06039 - - 0.0000000000000000000000000000000000000000000000000000000001493 205.0
MMS3_k127_2317626_6 Proteobacterial lipase chaperone protein - - - 0.0000000000000000000000000000000000000000000000000000002424 208.0
MMS3_k127_2317626_7 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000000000000001021 171.0
MMS3_k127_2317626_8 pathogenesis - - - 0.000000000007308 68.0
MMS3_k127_2317626_9 - - - - 0.00000000001785 68.0
MMS3_k127_2327774_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1410.0
MMS3_k127_2327774_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 2.414e-301 931.0
MMS3_k127_2327774_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 331.0
MMS3_k127_2327774_3 outer membrane efflux protein - - - 0.000000000000000005738 87.0
MMS3_k127_2327774_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000009429 53.0
MMS3_k127_2331308_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.997e-282 875.0
MMS3_k127_2331308_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 1.746e-278 865.0
MMS3_k127_2331308_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 447.0
MMS3_k127_2331308_3 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000001683 241.0
MMS3_k127_2331308_4 Prolyl oligopeptidase family K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000363 235.0
MMS3_k127_2331915_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1585.0
MMS3_k127_2331915_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 602.0
MMS3_k127_2331915_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 407.0
MMS3_k127_2331915_3 PFAM ABC 3 transport family K09816,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
MMS3_k127_2331915_4 PFAM ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008443 310.0
MMS3_k127_2331915_5 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 296.0
MMS3_k127_2331915_6 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000008776 173.0
MMS3_k127_2331915_7 PFAM glycoside hydrolase, family 13 domain protein - - - 0.0000000000000000000000000000007137 128.0
MMS3_k127_2331915_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000004291 126.0
MMS3_k127_2331915_9 Glycosyltransferase like family 2 - - - 0.00000005034 65.0
MMS3_k127_2332831_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 9.199e-286 899.0
MMS3_k127_2332831_1 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 515.0
MMS3_k127_2332831_2 epimerase dehydratase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 333.0
MMS3_k127_2332831_3 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000006282 254.0
MMS3_k127_2332831_4 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000008674 144.0
MMS3_k127_2332831_5 Protein of unknown function (DUF2892) - - - 0.00000000000000000000008162 99.0
MMS3_k127_2332831_6 Heavy-metal-associated domain - - - 0.000000000000000000002359 95.0
MMS3_k127_2332831_7 Protein of unknown function (DUF2400) - - - 0.00000000000000000000376 96.0
MMS3_k127_2336664_0 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005736 282.0
MMS3_k127_2336664_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000001401 258.0
MMS3_k127_2336664_2 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007617 236.0
MMS3_k127_2336664_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000001898 217.0
MMS3_k127_2336664_4 Belongs to the UPF0296 family K09777 - - 0.00000000000000000000000000000006598 129.0
MMS3_k127_2336664_5 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000006112 120.0
MMS3_k127_2336664_6 Belongs to the UPF0434 family K09791 - - 0.0000000000000000000000696 98.0
MMS3_k127_2381802_0 PFAM CoA-binding domain protein K09181 - - 0.0 1029.0
MMS3_k127_2381802_1 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009262 273.0
MMS3_k127_2381802_2 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000305 236.0
MMS3_k127_2381802_3 cheY-homologous receiver domain - - - 0.000000000000000000000000006787 115.0
MMS3_k127_2381802_4 - - - - 0.00000000000000000000000008034 111.0
MMS3_k127_2381802_5 response regulator K03413 - - 0.000000000000000002942 93.0
MMS3_k127_2386258_0 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 336.0
MMS3_k127_2386258_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005064 271.0
MMS3_k127_2386258_2 - - - - 0.0000000000001588 76.0
MMS3_k127_2386258_3 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000003663 67.0
MMS3_k127_2388109_0 PFAM peptidase K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 479.0
MMS3_k127_2388109_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 392.0
MMS3_k127_2388109_2 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000004886 136.0
MMS3_k127_2388109_4 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000007847 58.0
MMS3_k127_2392357_0 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 436.0
MMS3_k127_2392357_1 TIGRFAM TIGR00268 family protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000239 257.0
MMS3_k127_2392357_2 Ferritin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000002518 209.0
MMS3_k127_2392357_3 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000002615 161.0
MMS3_k127_2393020_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.738e-244 764.0
MMS3_k127_2393020_1 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000005027 184.0
MMS3_k127_2393020_2 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000008324 169.0
MMS3_k127_2393020_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000002877 151.0
MMS3_k127_2393020_4 redox protein regulator of disulfide bond formation K07092 - - 0.00000000000000000000000001007 112.0
MMS3_k127_2393020_5 HxlR-like helix-turn-helix - - - 0.000000000002267 73.0
MMS3_k127_2393020_6 - - - - 0.0001483 48.0
MMS3_k127_2405660_0 PFAM formate C-acetyltransferase glycine radical K00656,K20038 - 2.3.1.54,4.3.99.4 0.0 1444.0
MMS3_k127_2405660_1 Phosphate acyltransferases K03928 - 3.1.1.1 1.299e-251 796.0
MMS3_k127_2405660_10 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000000000000000000000000000946 212.0
MMS3_k127_2405660_12 GrpE - - - 0.000000000000000000000000000000000000000000000006274 182.0
MMS3_k127_2405660_13 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000001123 173.0
MMS3_k127_2405660_14 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000042 136.0
MMS3_k127_2405660_15 Hydrogenase/urease nickel incorporation, metallochaperone, hypA - - - 0.000000000000000000000000000003016 124.0
MMS3_k127_2405660_17 Galactose oxidase, central domain - - - 0.000000147 58.0
MMS3_k127_2405660_2 MreB/Mbl protein - - - 4.56e-250 782.0
MMS3_k127_2405660_3 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 543.0
MMS3_k127_2405660_4 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 442.0
MMS3_k127_2405660_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 416.0
MMS3_k127_2405660_6 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 372.0
MMS3_k127_2405660_7 TIGRFAM hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 303.0
MMS3_k127_2405660_8 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003339 279.0
MMS3_k127_2405660_9 WHG domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002293 244.0
MMS3_k127_2411888_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 506.0
MMS3_k127_2411888_1 Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 324.0
MMS3_k127_2411888_2 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000002887 178.0
MMS3_k127_2411888_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685,K07053 - 3.1.26.3,3.1.3.97 0.000000000000000000000000000000000001972 141.0
MMS3_k127_2411888_4 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0001032 45.0
MMS3_k127_2411904_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 499.0
MMS3_k127_2411904_1 Nickel-dependent hydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 492.0
MMS3_k127_2411904_10 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000005107 113.0
MMS3_k127_2411904_11 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000001395 95.0
MMS3_k127_2411904_12 GAF domain - - - 0.0000000000000000001485 104.0
MMS3_k127_2411904_13 Domain of unknown function (DUF4339) - - - 0.0000000000001243 77.0
MMS3_k127_2411904_2 PFAM Silent information regulator protein Sir2 K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 342.0
MMS3_k127_2411904_3 Oxidoreductase NAD-binding domain K15765 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 336.0
MMS3_k127_2411904_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 302.0
MMS3_k127_2411904_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000385 282.0
MMS3_k127_2411904_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001809 237.0
MMS3_k127_2411904_7 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000009648 157.0
MMS3_k127_2411904_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000003242 163.0
MMS3_k127_2411904_9 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000003206 141.0
MMS3_k127_2413843_0 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 422.0
MMS3_k127_2413843_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 391.0
MMS3_k127_2413843_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 292.0
MMS3_k127_2413843_3 - - - - 0.00000000000000000002071 92.0
MMS3_k127_2413843_4 Tetratricopeptide repeat - - - 0.00000000000004767 79.0
MMS3_k127_2442206_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1343.0
MMS3_k127_2442206_1 Belongs to the catalase family K03781 - 1.11.1.6 4.425e-292 900.0
MMS3_k127_2442206_10 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001998 281.0
MMS3_k127_2442206_11 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005823 282.0
MMS3_k127_2442206_12 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000002977 222.0
MMS3_k127_2442206_13 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.0000000000000000000000000000000000000001062 152.0
MMS3_k127_2442206_2 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 6.497e-227 713.0
MMS3_k127_2442206_3 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 8.55e-212 660.0
MMS3_k127_2442206_4 ferredoxin oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 2.168e-200 630.0
MMS3_k127_2442206_5 rRNA small subunit methyltransferase G K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 605.0
MMS3_k127_2442206_6 TIGRFAM Pyridine nucleotide-disulfide oxidoreductase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 469.0
MMS3_k127_2442206_7 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 444.0
MMS3_k127_2442206_8 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 338.0
MMS3_k127_2442206_9 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 331.0
MMS3_k127_2448749_0 PFAM Radical SAM - - - 4.416e-231 728.0
MMS3_k127_2448749_1 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 475.0
MMS3_k127_2448749_10 Response regulator, receiver - - - 0.000000000000000000003634 97.0
MMS3_k127_2448749_11 Chagasin family peptidase inhibitor I42 K14475 - - 0.00000000000002874 84.0
MMS3_k127_2448749_2 Cobyrinic acid ac-diamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 391.0
MMS3_k127_2448749_3 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 370.0
MMS3_k127_2448749_4 Cobyrinic acid ac-diamide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 337.0
MMS3_k127_2448749_5 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.00000000000000000000000000000000000000000000000004099 183.0
MMS3_k127_2448749_6 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000003402 169.0
MMS3_k127_2448749_7 nitrogen fixation - - - 0.000000000000000000000000000000000000000005611 158.0
MMS3_k127_2448749_9 TIGRFAM regulatory protein, FmdB - - - 0.00000000000000000000003584 104.0
MMS3_k127_2457382_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 295.0
MMS3_k127_2457382_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000001915 205.0
MMS3_k127_2457382_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000006927 200.0
MMS3_k127_2457382_3 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000105 203.0
MMS3_k127_2469098_0 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 452.0
MMS3_k127_2469098_1 General secretion pathway protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 332.0
MMS3_k127_2469098_2 Fimbrial assembly family protein K02461 - - 0.000000000000000000000000000000000000000000000000000000000000000000008399 252.0
MMS3_k127_2469098_3 General secretion pathway protein C K02452 - - 0.00000000000000000000000000000000000000000000000000000000000001302 226.0
MMS3_k127_2469098_4 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000009094 167.0
MMS3_k127_2469098_5 Type II secretion system (T2SS), protein M K02462 - - 0.0000000000000000000000000000000000008347 146.0
MMS3_k127_2469098_6 General secretion pathway protein K02459 - - 0.0000000000000000000000002267 115.0
MMS3_k127_2469098_7 - - - - 0.00000000000000000000000648 112.0
MMS3_k127_2469098_8 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000000000000000006439 104.0
MMS3_k127_2469098_9 Prokaryotic N-terminal methylation motif K02458 - - 0.000000000001289 73.0
MMS3_k127_2477746_0 Radical SAM superfamily K06871 - - 6.724e-199 628.0
MMS3_k127_2477746_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 408.0
MMS3_k127_2477746_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 314.0
MMS3_k127_2477746_3 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000003238 191.0
MMS3_k127_2477746_4 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000000000001509 190.0
MMS3_k127_2477746_5 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000005517 130.0
MMS3_k127_2488465_0 Domain of unknown function (DUF362) - - - 1.024e-203 642.0
MMS3_k127_2488465_1 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 498.0
MMS3_k127_2488465_2 COG1335 Amidases related to nicotinamidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 477.0
MMS3_k127_2488465_3 PFAM 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.000000000000000000000000000000000009033 137.0
MMS3_k127_2488465_4 - - - - 0.00000000000000004121 86.0
MMS3_k127_2498905_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 559.0
MMS3_k127_2498905_1 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 554.0
MMS3_k127_2498905_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 349.0
MMS3_k127_2498905_3 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000007078 144.0
MMS3_k127_2511534_0 PFAM Glycoside hydrolase 15-related - - - 7.45e-274 862.0
MMS3_k127_2511534_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 6.117e-195 630.0
MMS3_k127_2511534_10 Transcriptional regulator - - - 0.00000000000000000000000000215 115.0
MMS3_k127_2511534_11 Domain of unknown function (DUF374) K09778 - - 0.000000000000000002347 91.0
MMS3_k127_2511534_12 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000003324 72.0
MMS3_k127_2511534_2 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 558.0
MMS3_k127_2511534_3 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 487.0
MMS3_k127_2511534_4 AMMECR1 K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 470.0
MMS3_k127_2511534_5 radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 385.0
MMS3_k127_2511534_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 326.0
MMS3_k127_2511534_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 307.0
MMS3_k127_2511534_8 3D domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001545 243.0
MMS3_k127_2511534_9 PFAM Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000009127 230.0
MMS3_k127_2525250_0 sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 1.809e-245 762.0
MMS3_k127_2525250_1 Radical SAM superfamily K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 413.0
MMS3_k127_2525250_2 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000001254 236.0
MMS3_k127_2525250_3 - - - - 0.0000000000000000000000000000000000000000000000000000002029 205.0
MMS3_k127_2528161_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 7.153e-227 709.0
MMS3_k127_2528161_1 Uncharacterized ACR, COG1993 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 509.0
MMS3_k127_2528161_2 COG0531 Amino acid transporters - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 497.0
MMS3_k127_2528161_3 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001444 258.0
MMS3_k127_2528161_4 Belongs to the LeuD family K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000006136 256.0
MMS3_k127_2528161_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000000000000001999 173.0
MMS3_k127_2528161_6 response to stress - - - 0.00000000000000000000000000000000000000000000009703 172.0
MMS3_k127_2528161_7 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000838 156.0
MMS3_k127_2528161_8 serine threonine protein kinase - - - 0.0000000000000001119 80.0
MMS3_k127_2546432_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 445.0
MMS3_k127_2546432_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000204 209.0
MMS3_k127_2546432_2 Prokaryotic cytochrome b561 - - - 0.000000000262 65.0
MMS3_k127_2551292_0 synthetase K00666,K01897 - 6.2.1.3 4.832e-243 761.0
MMS3_k127_2551292_1 Serine aminopeptidase, S33 K01048 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 318.0
MMS3_k127_2551292_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000002075 200.0
MMS3_k127_2551292_3 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000005772 185.0
MMS3_k127_2551292_4 Alkaline phosphatase - - - 0.00000007542 63.0
MMS3_k127_2564191_0 hydrolase activity, hydrolyzing O-glycosyl compounds K01176,K01187 - 3.2.1.1,3.2.1.20 2.949e-294 926.0
MMS3_k127_2564191_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 4.604e-194 612.0
MMS3_k127_2564191_10 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
MMS3_k127_2564191_11 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001486 275.0
MMS3_k127_2564191_12 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000001989 271.0
MMS3_k127_2564191_13 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000004051 244.0
MMS3_k127_2564191_14 Protein of unknown function (DUF2905) - - - 0.000000000000000000000682 96.0
MMS3_k127_2564191_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 602.0
MMS3_k127_2564191_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 572.0
MMS3_k127_2564191_4 NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 502.0
MMS3_k127_2564191_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 501.0
MMS3_k127_2564191_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 466.0
MMS3_k127_2564191_7 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 422.0
MMS3_k127_2564191_8 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 331.0
MMS3_k127_2564191_9 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 309.0
MMS3_k127_2574198_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 463.0
MMS3_k127_2574198_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006684 467.0
MMS3_k127_2574198_2 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001611 281.0
MMS3_k127_2574198_3 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000002298 247.0
MMS3_k127_2574198_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000007919 215.0
MMS3_k127_2574198_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000004296 163.0
MMS3_k127_2589731_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0 1067.0
MMS3_k127_2589731_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0 1007.0
MMS3_k127_2589731_10 elongation factor Tu domain 2 protein K06207 - - 0.00000000000000000000000000000000000000000000000002904 180.0
MMS3_k127_2589731_11 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000007513 180.0
MMS3_k127_2589731_12 PFAM regulatory protein, ArsR K21903 - - 0.00000000000000000000000000000000000000004682 154.0
MMS3_k127_2589731_13 TIGRFAM Cytochrome o ubiquinol oxidase subunit IV K02300 - - 0.000000000000000000000000000000000009835 140.0
MMS3_k127_2589731_14 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000001266 135.0
MMS3_k127_2589731_15 Extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000005687 133.0
MMS3_k127_2589731_16 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000001696 105.0
MMS3_k127_2589731_17 C-terminal PDZ domain K04771 - 3.4.21.107 0.00001774 47.0
MMS3_k127_2589731_2 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 8.564e-230 731.0
MMS3_k127_2589731_3 TIGRFAM phosphoenolpyruvate-protein phosphotransferase K08484 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 527.0
MMS3_k127_2589731_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 403.0
MMS3_k127_2589731_5 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 393.0
MMS3_k127_2589731_6 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 371.0
MMS3_k127_2589731_7 cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 310.0
MMS3_k127_2589731_8 PFAM Sulphate transporter K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 319.0
MMS3_k127_2589731_9 TIGRFAM Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like K08966 - 3.1.3.87 0.00000000000000000000000000000000000000000000000000000000000007837 220.0
MMS3_k127_2607525_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1160.0
MMS3_k127_2607525_1 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 3.688e-209 669.0
MMS3_k127_2607525_2 ABC transporter transmembrane region K06147,K18890 - - 5.722e-203 651.0
MMS3_k127_2607525_3 ABC transporter transmembrane region K06147,K18889 - - 4.266e-199 636.0
MMS3_k127_2607525_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 578.0
MMS3_k127_2607525_5 Mechanosensitive ion channel K05802,K22051 GO:0005575,GO:0005623,GO:0005886,GO:0006884,GO:0008150,GO:0008361,GO:0009987,GO:0009992,GO:0016020,GO:0016043,GO:0019725,GO:0030104,GO:0032535,GO:0042592,GO:0044464,GO:0048878,GO:0055082,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 475.0
MMS3_k127_2607525_6 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 451.0
MMS3_k127_2607525_7 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 352.0
MMS3_k127_2607525_8 PFAM Pyruvoyl-dependent arginine decarboxylase K02626 - 4.1.1.19 0.0000000000000000000000000000000000000001427 150.0
MMS3_k127_2607525_9 PAP2 superfamily - - - 0.0000001546 62.0
MMS3_k127_261193_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 5.262e-256 809.0
MMS3_k127_261193_1 response regulator receiver K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 555.0
MMS3_k127_261193_2 chelatase, subunit ChlI K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 474.0
MMS3_k127_261193_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 382.0
MMS3_k127_261193_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 322.0
MMS3_k127_261193_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000001949 245.0
MMS3_k127_261193_6 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000000000007441 198.0
MMS3_k127_261193_7 PFAM conserved K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000004707 184.0
MMS3_k127_261193_8 Ion transport 2 domain protein K10716 - - 0.0000000000000117 75.0
MMS3_k127_2616698_0 Aconitate B N-terminal domain K01682 - 4.2.1.3,4.2.1.99 0.0 1100.0
MMS3_k127_2616698_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 587.0
MMS3_k127_2616698_10 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000003419 74.0
MMS3_k127_2616698_11 transposase activity - - - 0.0000000002302 63.0
MMS3_k127_2616698_12 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0002378 45.0
MMS3_k127_2616698_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 387.0
MMS3_k127_2616698_3 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 375.0
MMS3_k127_2616698_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002205 280.0
MMS3_k127_2616698_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002169 254.0
MMS3_k127_2616698_6 carbohydrate transport K11688 - - 0.000000000000000000000000000000000000000004438 169.0
MMS3_k127_2616698_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000002872 145.0
MMS3_k127_2616698_8 transposase activity - - - 0.00000000000000000000246 99.0
MMS3_k127_2616698_9 FCD - - - 0.0000000000000001407 89.0
MMS3_k127_2626718_0 Transglycosylase - - - 1.411e-292 929.0
MMS3_k127_2626718_1 ErfK YbiS YcfS YnhG family protein K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006082 282.0
MMS3_k127_2644644_0 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 2.562e-306 953.0
MMS3_k127_2644644_1 Alpha amylase, catalytic domain K00690 - 2.4.1.7 8.334e-217 681.0
MMS3_k127_2644644_2 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000112 241.0
MMS3_k127_2644644_3 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000002488 230.0
MMS3_k127_2644644_4 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000575 213.0
MMS3_k127_2644644_5 MlaD protein K06192 - - 0.000005824 57.0
MMS3_k127_2666818_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1339.0
MMS3_k127_2666818_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 3.997e-208 659.0
MMS3_k127_2666818_2 TIGRFAM acetylornithine and succinylornithine aminotransferase K00821,K05830,K09251 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009987,GO:0016740,GO:0016769,GO:0019842,GO:0030170,GO:0033094,GO:0034641,GO:0036094,GO:0042402,GO:0042802,GO:0043167,GO:0043168,GO:0044106,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:0097164,GO:1901363,GO:1901564,GO:1901565,GO:1901575 2.6.1.11,2.6.1.17,2.6.1.82 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 458.0
MMS3_k127_2666818_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000267 240.0
MMS3_k127_2694646_0 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 527.0
MMS3_k127_2694646_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000008455 51.0
MMS3_k127_2700619_0 TIGRFAM glycine betaine L-proline transport ATP binding subunit K02000 - 3.6.3.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 518.0
MMS3_k127_2700619_1 PFAM Binding-protein-dependent transport system inner membrane component K02001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 418.0
MMS3_k127_2700619_2 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000502 256.0
MMS3_k127_2702949_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 5.751e-292 920.0
MMS3_k127_2702949_1 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 453.0
MMS3_k127_2711992_0 type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006599 517.0
MMS3_k127_2711992_1 nitric oxide dioxygenase activity K21405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 349.0
MMS3_k127_2711992_2 PFAM Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000002112 157.0
MMS3_k127_2711992_3 Pilus assembly protein, PilP K02665 - - 0.000000000000000000000007372 110.0
MMS3_k127_2711992_4 PFAM Fimbrial assembly K02663 - - 0.000000000004243 68.0
MMS3_k127_2712738_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 399.0
MMS3_k127_2712738_1 PFAM oxidoreductase domain protein K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 381.0
MMS3_k127_2712738_2 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 344.0
MMS3_k127_2712738_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000001931 231.0
MMS3_k127_2712738_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.0000000000001162 72.0
MMS3_k127_2722054_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1091.0
MMS3_k127_2722054_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 532.0
MMS3_k127_2722054_2 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 355.0
MMS3_k127_2722054_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 312.0
MMS3_k127_2722054_4 Haemolysin-III related K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 279.0
MMS3_k127_2722054_5 GGDEF domain K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008687 290.0
MMS3_k127_2722054_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001847 236.0
MMS3_k127_2722054_7 Domain of unknown function (DUF4301) - - - 0.0000000000000000000000000000000000000000000000000000000000000001717 225.0
MMS3_k127_2722054_8 Glycosyl transferase WecB/TagA/CpsF family - - - 0.00000000882 68.0
MMS3_k127_2722054_9 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.000002321 60.0
MMS3_k127_2735141_0 PFAM Radical SAM domain protein K07139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 431.0
MMS3_k127_2735141_1 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 342.0
MMS3_k127_2735141_2 cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000149 233.0
MMS3_k127_2735141_3 cyclic nucleotide-binding K10914 - - 0.0000000000000000000009312 109.0
MMS3_k127_2735141_4 - - - - 0.000000000000000000005507 97.0
MMS3_k127_2749699_0 RNA-metabolising metallo-beta-lactamase K07576 - - 2.124e-224 706.0
MMS3_k127_2749699_1 PFAM MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 338.0
MMS3_k127_2749699_2 MGS-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 310.0
MMS3_k127_2749699_3 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 293.0
MMS3_k127_2749699_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001251 269.0
MMS3_k127_2761134_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 2.25e-221 704.0
MMS3_k127_2761134_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 486.0
MMS3_k127_2761134_10 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000001113 202.0
MMS3_k127_2761134_11 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000001069 199.0
MMS3_k127_2761134_12 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000002881 192.0
MMS3_k127_2761134_13 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000009496 161.0
MMS3_k127_2761134_14 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.000000000000000000000000000008848 133.0
MMS3_k127_2761134_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000002863 121.0
MMS3_k127_2761134_16 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000003502 95.0
MMS3_k127_2761134_2 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 357.0
MMS3_k127_2761134_3 PFAM ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 340.0
MMS3_k127_2761134_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 302.0
MMS3_k127_2761134_5 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 286.0
MMS3_k127_2761134_6 CHASE4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001572 280.0
MMS3_k127_2761134_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000002298 232.0
MMS3_k127_2761134_8 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000000000000000000000000000000007013 229.0
MMS3_k127_2761134_9 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000002164 210.0
MMS3_k127_2772424_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 0.0 1013.0
MMS3_k127_2772424_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 7.546e-270 853.0
MMS3_k127_2772424_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 586.0
MMS3_k127_2772424_3 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 306.0
MMS3_k127_2772424_4 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003022 263.0
MMS3_k127_2772424_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000008121 207.0
MMS3_k127_2772424_6 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.0000000000000000000000000000000000000001889 153.0
MMS3_k127_2779618_0 Transport of potassium into the cell K03549 - - 5.435e-246 775.0
MMS3_k127_2779618_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03316 - - 9.73e-244 768.0
MMS3_k127_2779618_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 424.0
MMS3_k127_2779618_3 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 408.0
MMS3_k127_2779618_4 alpha/beta hydrolase fold K22318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 362.0
MMS3_k127_2779618_5 PFAM ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 326.0
MMS3_k127_2779618_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000003223 227.0
MMS3_k127_2779618_7 peptidyl-prolyl cis-trans isomerase activity K03769,K03770 - 5.2.1.8 0.00000000000000000000000000001822 131.0
MMS3_k127_2779618_8 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000004759 115.0
MMS3_k127_2779618_9 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000000000000001045 99.0
MMS3_k127_2783810_0 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 6.691e-215 681.0
MMS3_k127_2783810_1 SMART molybdopterin oxidoreductase Fe4S4 region, NADH ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 349.0
MMS3_k127_2783810_2 class II (D K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000006464 205.0
MMS3_k127_2783810_3 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000000000167 187.0
MMS3_k127_2783810_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000003951 170.0
MMS3_k127_2783810_5 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000006853 164.0
MMS3_k127_2787353_0 ABC1 family - - - 7.53e-226 718.0
MMS3_k127_2787353_1 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 504.0
MMS3_k127_2787353_2 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 358.0
MMS3_k127_2787353_3 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000006737 202.0
MMS3_k127_2787353_4 MlaC protein K07323 - - 0.000000000000000000000000000000000000000009528 160.0
MMS3_k127_2796787_0 collagen metabolic process K08677 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 487.0
MMS3_k127_2796787_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 455.0
MMS3_k127_2796787_2 collagen metabolic process K08677 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 465.0
MMS3_k127_2796787_3 Fibronectin type III domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003493 308.0
MMS3_k127_2796787_4 Iron (Metal) dependent repressor, DtxR family K03709 - - 0.000000000000000000001787 102.0
MMS3_k127_2796787_5 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.00000000000000000004277 106.0
MMS3_k127_2798458_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1224.0
MMS3_k127_2798458_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 5.651e-204 646.0
MMS3_k127_2798458_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 359.0
MMS3_k127_2798458_3 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005866 276.0
MMS3_k127_2798458_4 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000002066 264.0
MMS3_k127_2798458_5 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000004985 234.0
MMS3_k127_2798777_0 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 4.929e-256 801.0
MMS3_k127_2798777_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 391.0
MMS3_k127_2798777_2 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000001904 212.0
MMS3_k127_2798777_3 Domain of unknown function (DUF1992) - - - 0.0000000000000000000000000000000000000005572 153.0
MMS3_k127_2798777_4 phosphorelay sensor kinase activity K03407 - 2.7.13.3 0.000000000000000000000000000000000000002386 170.0
MMS3_k127_2798777_5 - - - - 0.00000000000000000000000004479 113.0
MMS3_k127_2799376_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 466.0
MMS3_k127_2799376_1 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 297.0
MMS3_k127_2799376_2 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000004751 74.0
MMS3_k127_2802080_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.996e-280 865.0
MMS3_k127_2802080_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.166e-268 830.0
MMS3_k127_2802080_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000001265 175.0
MMS3_k127_2802080_11 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000008868 134.0
MMS3_k127_2802080_12 - - - - 0.00000000000008966 73.0
MMS3_k127_2802080_13 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division - - - 0.00000000000279 70.0
MMS3_k127_2802080_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 2.051e-214 676.0
MMS3_k127_2802080_3 Domain of unknown function (DUF362) K07138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 518.0
MMS3_k127_2802080_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 431.0
MMS3_k127_2802080_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 411.0
MMS3_k127_2802080_6 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 371.0
MMS3_k127_2802080_7 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000273 238.0
MMS3_k127_2802080_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000294 224.0
MMS3_k127_2802080_9 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000005207 175.0
MMS3_k127_2804990_0 PHP domain protein - - - 0.0 1106.0
MMS3_k127_2804990_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3.951e-308 957.0
MMS3_k127_2804990_10 NIL - - - 0.0000000000000000000000000000000000000000000008893 168.0
MMS3_k127_2804990_11 - - - - 0.0000000007506 65.0
MMS3_k127_2804990_13 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.00003042 50.0
MMS3_k127_2804990_2 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 602.0
MMS3_k127_2804990_3 Protein of unknown function (DUF3141) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 604.0
MMS3_k127_2804990_4 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 440.0
MMS3_k127_2804990_5 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 349.0
MMS3_k127_2804990_6 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 329.0
MMS3_k127_2804990_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 331.0
MMS3_k127_2804990_8 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000005799 235.0
MMS3_k127_2804990_9 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000000000000007781 233.0
MMS3_k127_2809190_0 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 8.804e-244 777.0
MMS3_k127_2809190_1 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 460.0
MMS3_k127_2809190_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000004529 208.0
MMS3_k127_2809190_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000001014 136.0
MMS3_k127_2809190_4 Colicin V production protein K03558 - - 0.0000000000000000000000000003484 117.0
MMS3_k127_2814360_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 429.0
MMS3_k127_2814360_1 Evidence 5 No homology to any previously reported sequences K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 327.0
MMS3_k127_2821342_0 phosphorylase K00688 - 2.4.1.1 0.0 1110.0
MMS3_k127_2821342_1 alpha amylase catalytic - - - 3.993e-198 629.0
MMS3_k127_2821342_2 PFAM Starch synthase catalytic K00703,K01176 - 2.4.1.21,3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 389.0
MMS3_k127_2830868_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 9.784e-234 732.0
MMS3_k127_2830868_1 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 456.0
MMS3_k127_2830868_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 422.0
MMS3_k127_2830868_3 SMART Chromosomal replication initiator DnaA domain - - - 0.00002599 49.0
MMS3_k127_2832706_0 Voltage gated chloride channel K03281 - - 3.596e-256 803.0
MMS3_k127_2832706_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 488.0
MMS3_k127_2832706_2 PFAM aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 325.0
MMS3_k127_2832706_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001054 281.0
MMS3_k127_2832706_4 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002184 277.0
MMS3_k127_2832706_5 Glycosyltransferase family 25 (LPS biosynthesis protein) - - - 0.00000000000000000000000000000000000000000000558 172.0
MMS3_k127_2841691_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 605.0
MMS3_k127_2842572_0 Domain of Unknown Function (DUF748) - - - 7.413e-211 690.0
MMS3_k127_2842572_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 405.0
MMS3_k127_2842572_2 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 305.0
MMS3_k127_2851974_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0 1175.0
MMS3_k127_2851974_1 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000002011 209.0
MMS3_k127_2851974_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000000000000000000000000000000001694 188.0
MMS3_k127_2851974_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000003 102.0
MMS3_k127_2851974_4 GtrA-like protein - - - 0.000000002622 63.0
MMS3_k127_2862916_0 NADH flavin oxidoreductase NADH oxidase - - - 1.096e-259 814.0
MMS3_k127_2862916_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 408.0
MMS3_k127_2862916_2 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.00000000000000000000000000000000000000000000000000000000000000000004125 235.0
MMS3_k127_2862916_3 Predicted metal-binding protein (DUF2284) - - - 0.00000000000000000000000000000000000000000000000002672 186.0
MMS3_k127_2862916_4 FAD dependent oxidoreductase K05898 - 1.3.99.4 0.00000000000000000000000000000000001605 137.0
MMS3_k127_2862916_5 SnoaL-like domain K01822 - 5.3.3.1 0.00000000000000006648 85.0
MMS3_k127_2867298_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1703.0
MMS3_k127_2867298_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 465.0
MMS3_k127_2867298_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000008251 115.0
MMS3_k127_2867298_3 - - - - 0.0000000006316 66.0
MMS3_k127_2868216_0 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 3.368e-213 676.0
MMS3_k127_2868216_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 303.0
MMS3_k127_288271_0 PFAM formate C-acetyltransferase glycine radical K00656,K20038 - 2.3.1.54,4.3.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 606.0
MMS3_k127_288271_1 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 522.0
MMS3_k127_288271_2 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 356.0
MMS3_k127_288271_3 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001222 270.0
MMS3_k127_288271_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000001371 51.0
MMS3_k127_2884431_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 505.0
MMS3_k127_2884431_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 333.0
MMS3_k127_2884431_2 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 336.0
MMS3_k127_2884431_3 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 296.0
MMS3_k127_2884431_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001371 211.0
MMS3_k127_2884431_5 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000007218 187.0
MMS3_k127_2884431_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000002192 168.0
MMS3_k127_2898354_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 608.0
MMS3_k127_2898354_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 441.0
MMS3_k127_2898354_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000003911 50.0
MMS3_k127_2900937_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 5.566e-217 687.0
MMS3_k127_2900937_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 526.0
MMS3_k127_2900937_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 435.0
MMS3_k127_2900937_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02668,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 310.0
MMS3_k127_2900937_4 PFAM response regulator receiver - - - 0.000000000000000000000000001804 116.0
MMS3_k127_2906302_0 aldolase class-II K01624 - 4.1.2.13 2.413e-199 629.0
MMS3_k127_2906302_1 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000001198 201.0
MMS3_k127_2906302_2 - - - - 0.0003718 44.0
MMS3_k127_2922334_0 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 2.066e-250 782.0
MMS3_k127_2922334_1 SMART molybdopterin oxidoreductase Fe4S4 region, NADH ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 318.0
MMS3_k127_2922334_2 Ferredoxin K17992 - 1.12.1.3 0.00000000000000000000000000000000000000000000000002599 181.0
MMS3_k127_2922334_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000004039 130.0
MMS3_k127_2922334_4 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000001489 116.0
MMS3_k127_2922334_5 Ferredoxin K17992 - 1.12.1.3 0.000000000000000000000001285 113.0
MMS3_k127_2946717_0 formate C-acetyltransferase glycine radical - - - 0.0 1188.0
MMS3_k127_2946717_1 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 567.0
MMS3_k127_2946717_10 PFAM ATP-binding region ATPase domain protein K10819 - 2.7.13.3 0.0000001181 54.0
MMS3_k127_2946717_2 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 316.0
MMS3_k127_2946717_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001154 262.0
MMS3_k127_2946717_4 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000006233 211.0
MMS3_k127_2946717_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000001452 194.0
MMS3_k127_2946717_6 Universal stress protein family - - - 0.000000000000000000000000000000000000000000001769 172.0
MMS3_k127_2946717_7 Protein of unknown function (DUF2889) - - - 0.00000000000000000000000000000000000000000009222 168.0
MMS3_k127_2946717_8 Transcriptional regulator, GntR family K05799 - - 0.0000000000000000000000000000000000000005949 158.0
MMS3_k127_2946717_9 Pfam Response regulator receiver - - - 0.0000000000000000008066 91.0
MMS3_k127_295070_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 601.0
MMS3_k127_295070_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 572.0
MMS3_k127_2950724_0 RQC K03654 - 3.6.4.12 1.499e-236 752.0
MMS3_k127_2950724_1 PFAM alpha beta hydrolase fold K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 309.0
MMS3_k127_2950724_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000002401 131.0
MMS3_k127_2950724_3 Alpha beta hydrolase K01563 - 3.8.1.5 0.0000000000003424 70.0
MMS3_k127_2951903_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 593.0
MMS3_k127_2951903_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 555.0
MMS3_k127_2951903_10 Transcriptional regulator - - - 0.0000000000000000000000000000000000002728 145.0
MMS3_k127_2951903_11 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000003442 98.0
MMS3_k127_2951903_12 4'-phosphopantetheinyl transferase superfamily - - - 0.00000000000345 75.0
MMS3_k127_2951903_2 COG0332 3-oxoacyl- acyl-carrier-protein synthase III K16872 - 2.3.1.207 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 527.0
MMS3_k127_2951903_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 406.0
MMS3_k127_2951903_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 331.0
MMS3_k127_2951903_6 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K15327,K15329,K15469 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 322.0
MMS3_k127_2951903_7 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016863,GO:0019171,GO:0019752,GO:0032787,GO:0034017,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 282.0
MMS3_k127_2951903_8 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007347 256.0
MMS3_k127_2951903_9 FabA-like domain K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000962 175.0
MMS3_k127_2954874_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 7.699e-203 647.0
MMS3_k127_2954874_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 591.0
MMS3_k127_2954874_2 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 357.0
MMS3_k127_2954874_3 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 356.0
MMS3_k127_2954874_4 PFAM Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001242 270.0
MMS3_k127_2954874_5 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000001719 198.0
MMS3_k127_2954874_6 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000004586 155.0
MMS3_k127_2958299_0 Pfam:DUF1446 - - - 2.419e-269 840.0
MMS3_k127_2958299_1 Acetyl propionyl-CoA carboxylase, alpha subunit K01968,K13777 - 6.4.1.4,6.4.1.5 1.11e-246 777.0
MMS3_k127_2958299_2 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K13778 - 6.4.1.5 6.815e-230 723.0
MMS3_k127_2958299_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 3.386e-229 721.0
MMS3_k127_2958299_4 PFAM acyl-CoA dehydrogenase domain protein K11731 - - 6.379e-195 613.0
MMS3_k127_2958299_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 333.0
MMS3_k127_2958299_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000008555 259.0
MMS3_k127_2958299_7 PFAM transcription factor CarD K07736 - - 0.00000000000000000000000000000000000000000000000000000000000000000006192 235.0
MMS3_k127_2958299_8 intracellular protein transport K05989 - 3.2.1.40 0.00000003227 61.0
MMS3_k127_2966654_0 TIGRFAM Acetoacetyl-CoA synthase K01907 - 6.2.1.16 3.592e-311 966.0
MMS3_k127_2966654_1 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 3.547e-284 885.0
MMS3_k127_2966654_2 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 305.0
MMS3_k127_2966654_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000006402 231.0
MMS3_k127_2979535_0 4Fe-4S dicluster domain - - - 5.069e-245 766.0
MMS3_k127_2979535_1 Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006731 248.0
MMS3_k127_2979535_2 cheY-homologous receiver domain - - - 0.0000000000000000000001641 101.0
MMS3_k127_2979535_3 helix_turn_helix, Lux Regulon - - - 0.000686 44.0
MMS3_k127_300563_0 AAA domain (Cdc48 subfamily) K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 475.0
MMS3_k127_300563_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000007957 128.0
MMS3_k127_300563_2 - - - - 0.00000000001685 72.0
MMS3_k127_3007145_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 4.673e-230 719.0
MMS3_k127_3007145_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000001554 143.0
MMS3_k127_3043359_0 MreB/Mbl protein - - - 2.313e-231 730.0
MMS3_k127_3043359_1 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 612.0
MMS3_k127_3043359_2 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 467.0
MMS3_k127_3043359_3 TIGRFAM molybdate ABC transporter, inner membrane subunit K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 353.0
MMS3_k127_3043359_4 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000146 137.0
MMS3_k127_3043359_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000682 130.0
MMS3_k127_3053640_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 4.45e-259 819.0
MMS3_k127_3053640_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 591.0
MMS3_k127_3053640_10 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000000000000000000000000000000000000000000000000002618 224.0
MMS3_k127_3053640_11 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000001973 203.0
MMS3_k127_3053640_12 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000001517 158.0
MMS3_k127_3053640_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 524.0
MMS3_k127_3053640_3 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 447.0
MMS3_k127_3053640_4 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 381.0
MMS3_k127_3053640_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008608 383.0
MMS3_k127_3053640_6 PFAM Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 346.0
MMS3_k127_3053640_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001848 302.0
MMS3_k127_3053640_8 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008767 265.0
MMS3_k127_3053640_9 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002464 257.0
MMS3_k127_3055444_0 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 2.756e-287 893.0
MMS3_k127_3055444_1 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 348.0
MMS3_k127_3055444_2 Nitronate monooxygenase - - - 0.000000000000000000000000000000000000000000001513 174.0
MMS3_k127_3055444_3 Molydopterin dinucleotide binding domain - - - 0.000000000000000000000000008558 118.0
MMS3_k127_3064204_0 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 9.037e-286 887.0
MMS3_k127_3064204_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.061e-244 762.0
MMS3_k127_3064204_2 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 461.0
MMS3_k127_3064204_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004099 233.0
MMS3_k127_3064570_0 phage portal protein, lambda - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 295.0
MMS3_k127_3064570_1 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000003187 226.0
MMS3_k127_3064570_2 - - - - 0.0000000000000000000000000000000000000000000000000000006741 205.0
MMS3_k127_3064570_3 - - - - 0.000000000000000000000000000000000009764 149.0
MMS3_k127_3064570_5 - - - - 0.000005409 56.0
MMS3_k127_3073986_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1163.0
MMS3_k127_3073986_1 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 6.315e-311 964.0
MMS3_k127_3073986_2 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000000000000000002289 214.0
MMS3_k127_3083607_0 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 498.0
MMS3_k127_3083607_1 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004604 291.0
MMS3_k127_3083607_2 Potential Queuosine, Q, salvage protein family - - - 0.000000000000000000000000000000000000000000008903 168.0
MMS3_k127_3083607_3 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000007721 82.0
MMS3_k127_3084915_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1752.0
MMS3_k127_3084915_1 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002293 283.0
MMS3_k127_3084915_2 Pyridoxal-dependent decarboxylase conserved domain K01634 - 4.1.2.27 0.00000000000000000000000000000000000000000000000000000000000001241 218.0
MMS3_k127_3084915_3 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000003847 186.0
MMS3_k127_3084915_4 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000000000000000002235 180.0
MMS3_k127_3084915_5 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000000000008751 99.0
MMS3_k127_3084915_6 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000008124 85.0
MMS3_k127_3094460_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 3.291e-195 620.0
MMS3_k127_3094460_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 537.0
MMS3_k127_3094460_2 Proton-conducting membrane transporter K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 522.0
MMS3_k127_3094460_3 Proton-conducting membrane transporter K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 427.0
MMS3_k127_3094460_4 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002786 285.0
MMS3_k127_3094460_5 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004396 265.0
MMS3_k127_3094460_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000007509 192.0
MMS3_k127_3094460_7 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000009971 149.0
MMS3_k127_3096063_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1325.0
MMS3_k127_3096063_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 305.0
MMS3_k127_3096063_2 4Fe-4S single cluster domain - - - 0.00000000000000000000000000009902 120.0
MMS3_k127_3102053_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007463 486.0
MMS3_k127_3102053_1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.0000000000000000000000000000000000000000000000000000000001078 209.0
MMS3_k127_3102053_2 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000001082 198.0
MMS3_k127_3102053_3 - - - - 0.0000000000000000000002384 100.0
MMS3_k127_3102053_4 nucleotidyltransferase activity K01153 - 3.1.21.3 0.000000000001315 69.0
MMS3_k127_3102053_5 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0006524 42.0
MMS3_k127_3103227_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 452.0
MMS3_k127_3103227_1 PFAM iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 338.0
MMS3_k127_3103227_2 transcriptional regulator K03577 - - 0.00000000000000000000000000000000000000000006525 168.0
MMS3_k127_3103227_3 alcohol dehydrogenase - - - 0.00000000000000000000000000284 116.0
MMS3_k127_3103227_4 Domain of unknown function (DUF4404) - - - 0.0000000000000000000000004427 108.0
MMS3_k127_3117988_0 Acyl-CoA dehydrogenase type 2 domain - - - 2.91e-227 710.0
MMS3_k127_3117988_1 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 519.0
MMS3_k127_3117988_2 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 456.0
MMS3_k127_3117988_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 377.0
MMS3_k127_3117988_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000001784 213.0
MMS3_k127_3117988_5 PFAM Extracellular solute-binding protein, family 3 - - - 0.0000000000000000000000000000000000000000000000005068 184.0
MMS3_k127_3117988_6 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000001411 124.0
MMS3_k127_3117988_7 Pkd domain containing protein K20276 - - 0.00000000000000000178 90.0
MMS3_k127_3121929_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 387.0
MMS3_k127_3121929_1 Protein of unknown function (DUF1638) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 360.0
MMS3_k127_3121929_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 323.0
MMS3_k127_3121929_3 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000001393 165.0
MMS3_k127_3121929_4 regulatory protein TetR - - - 0.0000000000000000000000000000002212 130.0
MMS3_k127_3122948_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 7.597e-268 842.0
MMS3_k127_3122948_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 569.0
MMS3_k127_3122948_10 Universal stress protein family - - - 0.000000000000000000000000000000000000000001617 160.0
MMS3_k127_3122948_11 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000000000000000000005507 153.0
MMS3_k127_3122948_12 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.000000006172 61.0
MMS3_k127_3122948_13 Belongs to the glycosyl hydrolase 30 family - - - 0.0000001115 65.0
MMS3_k127_3122948_2 collagen metabolic process K08677 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 542.0
MMS3_k127_3122948_3 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 362.0
MMS3_k127_3122948_4 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 331.0
MMS3_k127_3122948_5 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 299.0
MMS3_k127_3122948_6 cyclic nucleotide-binding K01420,K21563 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001711 266.0
MMS3_k127_3122948_7 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000002483 199.0
MMS3_k127_3122948_8 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.000000000000000000000000000000000000000000000001533 179.0
MMS3_k127_3122948_9 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.000000000000000000000000000000000000000000003008 167.0
MMS3_k127_312533_0 PFAM Type II IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 544.0
MMS3_k127_312533_1 PFAM Type II IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 473.0
MMS3_k127_312533_2 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 458.0
MMS3_k127_312533_3 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 419.0
MMS3_k127_312533_4 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 304.0
MMS3_k127_312533_5 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006067 250.0
MMS3_k127_312533_6 Pfam:TPM K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009126 253.0
MMS3_k127_312533_7 TPM domain K08988 - - 0.00000000000000000000000000000000000000000000000000000000000000000003151 238.0
MMS3_k127_312533_8 - - - - 0.000000000004367 69.0
MMS3_k127_3130627_0 PFAM AMP-dependent synthetase and ligase - - - 4.696e-206 656.0
MMS3_k127_3130627_1 CoA-transferase family III K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 486.0
MMS3_k127_3130627_2 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 445.0
MMS3_k127_3130627_3 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 319.0
MMS3_k127_3130627_4 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000305 269.0
MMS3_k127_3130627_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000001207 175.0
MMS3_k127_3130627_6 MerR, DNA binding - - - 0.00000000000000000000000000000000000005827 146.0
MMS3_k127_3130627_7 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000004315 81.0
MMS3_k127_3134648_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 450.0
MMS3_k127_3134648_1 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 338.0
MMS3_k127_3134648_2 - - - - 0.00000000000000000000000000000000000000000000000001777 183.0
MMS3_k127_3134648_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000003651 124.0
MMS3_k127_3154534_0 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 526.0
MMS3_k127_3154534_1 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 487.0
MMS3_k127_3171595_0 Belongs to the peptidase M16 family K07263 - - 1.194e-294 930.0
MMS3_k127_3171595_1 Protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000347 241.0
MMS3_k127_3171595_2 Peptidoglycan-synthase activator LpoB K07337 - - 0.000000000000000000000000000000000000000000000000000001306 199.0
MMS3_k127_3171595_3 PFAM ResB family protein K07399 - - 0.0001727 45.0
MMS3_k127_3186241_0 oxidoreductase activity - - - 6.322e-249 786.0
MMS3_k127_3186241_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 2.805e-222 698.0
MMS3_k127_3186241_2 PFAM Iron-containing alcohol dehydrogenase K00001,K19954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001023 286.0
MMS3_k127_3186241_3 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000000000278 89.0
MMS3_k127_3187498_0 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 527.0
MMS3_k127_3187498_1 5'-nucleotidase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000003906 236.0
MMS3_k127_3187498_2 PFAM peptidase S45 penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 0.0000000000000000000000000000002958 126.0
MMS3_k127_3187498_3 - - - - 0.000000000000000000000000000002363 123.0
MMS3_k127_3187498_4 surface antigen - - - 0.00001272 57.0
MMS3_k127_3187498_5 17 kDa outer membrane surface antigen - - - 0.00009106 54.0
MMS3_k127_3219832_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 579.0
MMS3_k127_3219832_1 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 325.0
MMS3_k127_3219832_2 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003903 256.0
MMS3_k127_3219832_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000001795 178.0
MMS3_k127_3233854_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 476.0
MMS3_k127_3233854_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000006109 233.0
MMS3_k127_3233854_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000002114 177.0
MMS3_k127_3233854_3 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000007051 99.0
MMS3_k127_3237374_0 acyl-coa dehydrogenase K09456 - - 4.279e-277 863.0
MMS3_k127_3237374_1 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 3.109e-255 790.0
MMS3_k127_3237374_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 433.0
MMS3_k127_3237374_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000009761 227.0
MMS3_k127_3239615_0 malic protein domain protein K00029 - 1.1.1.40 4.819e-260 811.0
MMS3_k127_3239615_1 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000006003 154.0
MMS3_k127_3240747_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 329.0
MMS3_k127_3240747_1 anion-transporting ATPase - - - 0.0000000000000000000000000000000000000000000000007978 183.0
MMS3_k127_3240747_2 CobQ/CobB/MinD/ParA nucleotide binding domain - - - 0.000000000000000000000000000000000000000000008217 176.0
MMS3_k127_3240747_3 PFAM Patatin K07001 - - 0.0000000000000000000000000000005156 134.0
MMS3_k127_3240747_4 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000000008996 110.0
MMS3_k127_3240747_5 PHB/PHA accumulation regulator DNA-binding domain - - - 0.0008754 49.0
MMS3_k127_3243801_0 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 609.0
MMS3_k127_3243801_1 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 349.0
MMS3_k127_3243801_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 299.0
MMS3_k127_3243801_3 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 288.0
MMS3_k127_3243801_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001423 271.0
MMS3_k127_3243801_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001307 272.0
MMS3_k127_3243801_6 TIGRFAM maf protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000001524 229.0
MMS3_k127_3243801_7 PFAM Mammalian cell entry related domain protein K02067,K06192 - - 0.000000000000000000000000000000000000000000000000000000000009398 219.0
MMS3_k127_3243801_8 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000001631 122.0
MMS3_k127_3247890_0 Protein of unknown function (DUF3373) - - - 1.394e-203 648.0
MMS3_k127_3247890_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 488.0
MMS3_k127_3247890_2 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 478.0
MMS3_k127_3247890_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 353.0
MMS3_k127_3247890_4 - - - - 0.000000000000000000000000000000000000000004357 156.0
MMS3_k127_3247890_5 - - - - 0.000000000000000000000000000006577 123.0
MMS3_k127_3247890_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000008012 118.0
MMS3_k127_3247890_7 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000000007485 111.0
MMS3_k127_3247890_8 Nitrate reductase delta subunit - - - 0.00000000000000000004049 99.0
MMS3_k127_3247890_9 - - - - 0.000000001106 62.0
MMS3_k127_3248435_0 pyruvate phosphate dikinase K01007 - 2.7.9.2 0.0 1102.0
MMS3_k127_3248435_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 495.0
MMS3_k127_3248435_2 radical SAM domain protein - - - 0.00000000000000000000000000000000001212 147.0
MMS3_k127_3254378_0 Phosphofructokinase K00895,K21071 - 2.7.1.11,2.7.1.90 5.415e-310 963.0
MMS3_k127_3254378_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 570.0
MMS3_k127_3254378_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 550.0
MMS3_k127_3254378_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 373.0
MMS3_k127_3254378_4 Protein of unknown function DUF134 - - - 0.000000000000000000000000000000000000000000000002649 176.0
MMS3_k127_3261361_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 524.0
MMS3_k127_3261361_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 500.0
MMS3_k127_3261361_2 3-dehydroquinate synthase (EC 4.6.1.3) K11646 - 1.4.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 498.0
MMS3_k127_3261361_3 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 427.0
MMS3_k127_3261361_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 313.0
MMS3_k127_3261361_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000004973 173.0
MMS3_k127_3287239_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847 - 5.4.99.2 0.0 1111.0
MMS3_k127_3287239_1 General secretory system II protein E domain protein - - - 0.0 1050.0
MMS3_k127_3287239_10 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 369.0
MMS3_k127_3287239_11 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 350.0
MMS3_k127_3287239_12 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 339.0
MMS3_k127_3287239_13 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 335.0
MMS3_k127_3287239_14 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 336.0
MMS3_k127_3287239_15 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 294.0
MMS3_k127_3287239_16 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000000000000000000000002199 213.0
MMS3_k127_3287239_17 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000002351 207.0
MMS3_k127_3287239_18 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000008557 184.0
MMS3_k127_3287239_19 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000001318 183.0
MMS3_k127_3287239_2 PFAM ABC transporter K06158 - - 1.707e-240 758.0
MMS3_k127_3287239_20 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000622 172.0
MMS3_k127_3287239_21 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000003186 111.0
MMS3_k127_3287239_22 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000001018 111.0
MMS3_k127_3287239_23 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000009689 103.0
MMS3_k127_3287239_24 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000002358 103.0
MMS3_k127_3287239_25 - - - - 0.000006504 51.0
MMS3_k127_3287239_26 ergothioneine biosynthetic process K01919 - 6.3.2.2 0.00000839 48.0
MMS3_k127_3287239_27 PFAM type IV pilus assembly PilZ - - - 0.00001345 52.0
MMS3_k127_3287239_28 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.0004847 50.0
MMS3_k127_3287239_3 sigma-54 factor interaction domain-containing protein K02667 - - 5.601e-212 666.0
MMS3_k127_3287239_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 561.0
MMS3_k127_3287239_5 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 520.0
MMS3_k127_3287239_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 511.0
MMS3_k127_3287239_7 PFAM 4Fe-4S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 506.0
MMS3_k127_3287239_8 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 426.0
MMS3_k127_3287239_9 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 386.0
MMS3_k127_3291755_0 Penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 1.126e-240 771.0
MMS3_k127_3291755_1 Peptidase family M20/M25/M40 K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 482.0
MMS3_k127_3291755_2 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 364.0
MMS3_k127_3291755_3 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
MMS3_k127_3291755_4 Tyrosine phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000009387 214.0
MMS3_k127_3291755_5 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000001483 127.0
MMS3_k127_3291755_6 - - - - 0.0000000000000000000000003405 108.0
MMS3_k127_3291755_7 S-layer homology domain - - - 0.00001301 54.0
MMS3_k127_3294332_0 Saccharopine dehydrogenase K00290 - 1.5.1.7 1.062e-216 677.0
MMS3_k127_3294332_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.999e-202 637.0
MMS3_k127_3294332_10 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000007883 184.0
MMS3_k127_3294332_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 610.0
MMS3_k127_3294332_3 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K13747 - 4.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 507.0
MMS3_k127_3294332_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 493.0
MMS3_k127_3294332_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 490.0
MMS3_k127_3294332_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 452.0
MMS3_k127_3294332_7 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 438.0
MMS3_k127_3294332_8 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 424.0
MMS3_k127_3294332_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 323.0
MMS3_k127_3305771_0 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 1.862e-215 681.0
MMS3_k127_3305771_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 485.0
MMS3_k127_3305771_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000002986 143.0
MMS3_k127_3305771_11 PDGLE domain - - - 0.0000000000000000000000000003396 117.0
MMS3_k127_3305771_2 2Fe-2S iron-sulfur cluster binding domain K05299 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0044237,GO:0044424,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.17.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 407.0
MMS3_k127_3305771_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 374.0
MMS3_k127_3305771_4 Cobalt uptake substrate-specific transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 301.0
MMS3_k127_3305771_5 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 305.0
MMS3_k127_3305771_6 Part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001583 259.0
MMS3_k127_3305771_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000008681 236.0
MMS3_k127_3305771_8 Cobalt transport protein K02008 - - 0.0000000000000000000000000000000000000000000000000000001852 204.0
MMS3_k127_3305771_9 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000004706 163.0
MMS3_k127_3310218_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 606.0
MMS3_k127_3310218_1 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 569.0
MMS3_k127_3310218_3 isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000004444 89.0
MMS3_k127_3310218_4 gag-polyprotein putative aspartyl protease - - - 0.000000002889 70.0
MMS3_k127_3310218_5 - - - - 0.0001618 50.0
MMS3_k127_3321571_0 type II secretion system K02454 - - 7.139e-226 711.0
MMS3_k127_3321571_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 3.989e-209 705.0
MMS3_k127_3321571_2 Prokaryotic N-terminal methylation motif K08084 - - 0.000000000000005819 81.0
MMS3_k127_3321571_3 Type II transport protein GspH K08084 - - 0.0000000000004274 76.0
MMS3_k127_3321571_4 Pfam:N_methyl_2 - - - 0.000000000002237 77.0
MMS3_k127_3321571_5 - - - - 0.00000001514 63.0
MMS3_k127_3322947_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.254e-228 718.0
MMS3_k127_3322947_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 290.0
MMS3_k127_3322947_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000018 135.0
MMS3_k127_3322947_3 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000003924 104.0
MMS3_k127_3328859_0 Ethanolamine ammonia lyase large subunit (EutB) K03735 - 4.3.1.7 9.398e-208 651.0
MMS3_k127_3328859_1 Ethanolamine ammonia-lyase light chain (EutC) K03736 - 4.3.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 288.0
MMS3_k127_3328859_2 protein contains double-stranded beta-helix domain - - - 0.000000000000000000000000000000000000000000000000000000001283 206.0
MMS3_k127_3328859_3 Domain of unknown function (DUF386) - - - 0.00000000000000000000000000000000000000000000000000003374 191.0
MMS3_k127_3338597_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.243e-242 770.0
MMS3_k127_3338597_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 548.0
MMS3_k127_3338597_2 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 470.0
MMS3_k127_3338597_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 381.0
MMS3_k127_3338597_4 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009139 278.0
MMS3_k127_3338597_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000002309 239.0
MMS3_k127_3338597_6 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000002646 189.0
MMS3_k127_3338597_7 PFAM Outer membrane K06142 - - 0.0000000000000000000000000000000001075 140.0
MMS3_k127_3339729_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 1.872e-258 812.0
MMS3_k127_3339729_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 357.0
MMS3_k127_3339729_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000003988 258.0
MMS3_k127_3339729_3 CGGC - - - 0.00000000000000000000000000000000000000000000000000001428 191.0
MMS3_k127_3339729_4 COGs COG4087 Soluble P-type ATPase - - - 0.0000000000000000000000000000000000000000000000000000322 191.0
MMS3_k127_3339729_5 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000001523 145.0
MMS3_k127_3339729_6 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000255 122.0
MMS3_k127_3339729_7 - - - - 0.00000000000000000001738 97.0
MMS3_k127_3345402_0 Molecular chaperone. Has ATPase activity K04079 - - 1.992e-268 839.0
MMS3_k127_3345402_1 General secretory system II protein E domain protein K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009849 358.0
MMS3_k127_3345402_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004912 272.0
MMS3_k127_3345402_3 response regulator K03413,K07688 - - 0.00000000000000000000000003786 112.0
MMS3_k127_3346607_0 acyl-coa dehydrogenase K09456 - - 2.241e-261 818.0
MMS3_k127_3346607_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 486.0
MMS3_k127_3346607_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 398.0
MMS3_k127_3346607_3 all-trans-retinol 13,14-reductase activity K09516 GO:0001523,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005640,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0009987,GO:0010817,GO:0012505,GO:0016020,GO:0016101,GO:0016491,GO:0016627,GO:0019867,GO:0031090,GO:0031965,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0034308,GO:0034754,GO:0042175,GO:0042445,GO:0042572,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0051786,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0098588,GO:0098805,GO:0098827,GO:1901615 1.3.99.23 0.00000000000000000000001209 116.0
MMS3_k127_3346607_4 - - - - 0.00000006728 58.0
MMS3_k127_3353039_0 thiolester hydrolase activity K02170,K07002 - 3.1.1.85 0.000000000000000000000000000000000000000000000296 173.0
MMS3_k127_3353039_1 - - - - 0.000000000000000000000000000000000000000007482 162.0
MMS3_k127_3353039_2 Belongs to the phosphatidylserine decarboxylase family K01613 - 4.1.1.65 0.0000000000000003374 79.0
MMS3_k127_3353039_3 - - - - 0.00000000000000176 80.0
MMS3_k127_3353039_4 PFAM prolipoprotein diacylglyceryl transferase - - - 0.00000000000001646 75.0
MMS3_k127_33627_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 3.664e-300 938.0
MMS3_k127_33627_1 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 577.0
MMS3_k127_33627_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 353.0
MMS3_k127_33627_3 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001914 281.0
MMS3_k127_33627_4 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000001279 187.0
MMS3_k127_33627_5 PFAM ferredoxin thioredoxin reductase beta - - - 0.0000000000000000000000000000000000000000000000001691 179.0
MMS3_k127_33627_6 protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000000000000000000000000000369 184.0
MMS3_k127_33627_7 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.000000000000000000000000000000000000000001312 162.0
MMS3_k127_33627_8 PFAM Glutaredoxin K06191 - - 0.000000000000000000000000000000000009123 138.0
MMS3_k127_33627_9 - - - - 0.000000000000000000000000001365 113.0
MMS3_k127_3364638_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1114.0
MMS3_k127_3371203_0 Sugar (and other) transporter K03446 - - 4.363e-195 621.0
MMS3_k127_3371203_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 483.0
MMS3_k127_3371203_2 HlyD membrane-fusion protein of T1SS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 377.0
MMS3_k127_3371203_3 Bacterial regulatory proteins TetR family - - - 0.000000000000000001164 87.0
MMS3_k127_337126_0 oxidoreductase activity - - - 1.964e-229 730.0
MMS3_k127_337126_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 442.0
MMS3_k127_337126_2 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000883 385.0
MMS3_k127_337126_3 GPR1 FUN34 yaaH family protein K07034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001683 263.0
MMS3_k127_337126_4 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001342 245.0
MMS3_k127_337126_5 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000005867 146.0
MMS3_k127_337126_6 dihydromethanopterin reductase activity - - - 0.0000000000000000000000000000000006374 133.0
MMS3_k127_3377461_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0 1237.0
MMS3_k127_3377461_1 Acetyl-CoA dehydrogenase C-terminal like - - - 7.132e-261 815.0
MMS3_k127_3377461_10 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000004674 152.0
MMS3_k127_3377461_11 - K09986 - - 0.000000000000000000000000000000000000003034 151.0
MMS3_k127_3377461_12 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000009523 147.0
MMS3_k127_3377461_13 - - - - 0.00000002409 61.0
MMS3_k127_3377461_2 acyl-CoA dehydrogenase K16173 - 1.3.99.32 4.14e-197 620.0
MMS3_k127_3377461_3 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 609.0
MMS3_k127_3377461_4 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 428.0
MMS3_k127_3377461_5 Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily K01661 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 420.0
MMS3_k127_3377461_6 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 409.0
MMS3_k127_3377461_7 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009626 346.0
MMS3_k127_3377461_8 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008927 271.0
MMS3_k127_3377461_9 Acyl-ACP thioesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000224 227.0
MMS3_k127_3379983_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1294.0
MMS3_k127_3379983_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1163.0
MMS3_k127_3379983_2 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 324.0
MMS3_k127_3379983_3 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 302.0
MMS3_k127_3379983_4 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001191 280.0
MMS3_k127_3379983_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004913 273.0
MMS3_k127_3379983_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000009429 173.0
MMS3_k127_3379983_7 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000000000003023 163.0
MMS3_k127_3388189_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 3.807e-253 796.0
MMS3_k127_3388189_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 2.84e-221 694.0
MMS3_k127_3388189_11 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000347 149.0
MMS3_k127_3388189_12 Domain of unknown function (DUF1844) - - - 0.00000000000000000000001385 103.0
MMS3_k127_3388189_13 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000003639 106.0
MMS3_k127_3388189_14 PilZ domain - - - 0.00006577 52.0
MMS3_k127_3388189_2 Belongs to the RtcB family K14415 - 6.5.1.3 1.961e-216 680.0
MMS3_k127_3388189_3 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 501.0
MMS3_k127_3388189_4 Peptidase family M1 domain K01256,K13722 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 502.0
MMS3_k127_3388189_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 357.0
MMS3_k127_3388189_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 331.0
MMS3_k127_3388189_7 PFAM GGDEF domain containing protein K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 292.0
MMS3_k127_3388189_8 Psort location Cytoplasmic, score 8.87 K07023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000389 246.0
MMS3_k127_3388189_9 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000007044 231.0
MMS3_k127_3390652_0 Carbohydrate phosphorylase K00688,K16153 - 2.4.1.1,2.4.1.11 5.925e-308 959.0
MMS3_k127_3390652_1 4Fe-4S dicluster domain - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.321e-264 818.0
MMS3_k127_3390652_10 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000001813 166.0
MMS3_k127_3390652_11 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.0000000000000000000000000000000000007617 141.0
MMS3_k127_3390652_12 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000007915 98.0
MMS3_k127_3390652_2 PFAM Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 580.0
MMS3_k127_3390652_3 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 481.0
MMS3_k127_3390652_4 PFAM cytochrome c class III - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 452.0
MMS3_k127_3390652_5 4Fe-4S dicluster domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 434.0
MMS3_k127_3390652_6 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 369.0
MMS3_k127_3390652_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 362.0
MMS3_k127_3390652_8 nitrate reductase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 295.0
MMS3_k127_3390652_9 ABC transporter K02013,K05776 - 3.6.3.34 0.000000000000000000000000000000000000000000000000414 185.0
MMS3_k127_3410973_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009004 388.0
MMS3_k127_3410973_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 294.0
MMS3_k127_3410973_2 AsnC-type helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000001277 207.0
MMS3_k127_3410973_3 TIGRFAM secondary thiamine-phosphate synthase enzyme - - - 0.000000000000000000000000000000000000000000000000166 182.0
MMS3_k127_3410973_4 transcriptional regulator - - - 0.000000000000000000000000000000000002929 144.0
MMS3_k127_3419016_0 phosphoenolpyruvate-dependent sugar phosphotransferase system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388 524.0
MMS3_k127_3419016_1 Uncharacterized protein family (UPF0051) K07033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 487.0
MMS3_k127_3419016_2 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 355.0
MMS3_k127_3419016_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000003403 230.0
MMS3_k127_3419016_4 Nitroreductase family - - - 0.00000000000000000005144 93.0
MMS3_k127_3419016_5 - - - - 0.000000000000000556 81.0
MMS3_k127_3420426_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 1.648e-235 739.0
MMS3_k127_3420426_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 6.282e-225 709.0
MMS3_k127_3420426_10 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000001322 203.0
MMS3_k127_3420426_11 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000002347 166.0
MMS3_k127_3420426_12 PFAM PEBP family protein K06910 - - 0.00000000000000000000000000000000000000000001447 170.0
MMS3_k127_3420426_13 PFAM HNH endonuclease K07451 - - 0.000000000000000000000000000000000000001512 148.0
MMS3_k127_3420426_14 Multidrug transporter - - - 0.0000000000002844 74.0
MMS3_k127_3420426_15 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000004165 51.0
MMS3_k127_3420426_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.512e-211 665.0
MMS3_k127_3420426_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 571.0
MMS3_k127_3420426_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 555.0
MMS3_k127_3420426_5 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 468.0
MMS3_k127_3420426_6 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 412.0
MMS3_k127_3420426_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 307.0
MMS3_k127_3420426_8 PFAM RimK domain protein ATP-grasp K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 293.0
MMS3_k127_3420426_9 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000001396 236.0
MMS3_k127_3426615_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 596.0
MMS3_k127_3426615_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 599.0
MMS3_k127_3426615_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 364.0
MMS3_k127_3426615_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009677 274.0
MMS3_k127_3426615_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000013 186.0
MMS3_k127_3426615_5 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000002632 154.0
MMS3_k127_3426771_0 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 6.283e-197 624.0
MMS3_k127_3426771_1 Periplasmic binding protein K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 461.0
MMS3_k127_3426771_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000004412 222.0
MMS3_k127_3426771_3 - - - - 0.00000004599 63.0
MMS3_k127_3426940_0 - - - - 0.00000000000000000000000000000000000000000000000000006235 216.0
MMS3_k127_3426940_1 Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division - - - 0.000000000000000000000000000000001058 152.0
MMS3_k127_3428347_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 7.437e-217 687.0
MMS3_k127_3428347_1 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 471.0
MMS3_k127_3428347_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009226 414.0
MMS3_k127_3428347_3 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 398.0
MMS3_k127_3428347_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 377.0
MMS3_k127_3428347_5 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 358.0
MMS3_k127_3436402_0 Belongs to the thiolase family K07550 - - 3.279e-206 647.0
MMS3_k127_3436402_1 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 569.0
MMS3_k127_3436402_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 563.0
MMS3_k127_3436402_3 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 292.0
MMS3_k127_3436402_4 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000001739 252.0
MMS3_k127_3450294_0 acyl-coa dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 603.0
MMS3_k127_3450294_1 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 543.0
MMS3_k127_3450294_2 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 514.0
MMS3_k127_3450294_3 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 534.0
MMS3_k127_3450294_4 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 429.0
MMS3_k127_3450294_5 alcohol dehydrogenase - - - 0.00000000000000000000000000000009188 129.0
MMS3_k127_345262_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 4.509e-268 836.0
MMS3_k127_345262_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 2.109e-236 738.0
MMS3_k127_345262_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426 - 3.5.1.4 1.659e-232 728.0
MMS3_k127_345262_3 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 1.668e-219 704.0
MMS3_k127_345262_4 CoA binding domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 569.0
MMS3_k127_345262_5 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000007109 194.0
MMS3_k127_345262_6 Protein of unknown function (DUF3795) - - - 0.0000000000000000000000000000002585 126.0
MMS3_k127_3456240_0 PFAM short-chain dehydrogenase reductase SDR - - - 0.0 1261.0
MMS3_k127_3456240_1 PFAM short-chain dehydrogenase reductase SDR - - - 4.896e-319 989.0
MMS3_k127_3456240_2 Belongs to the thiolase family K00626 - 2.3.1.9 4.271e-244 759.0
MMS3_k127_3456240_3 PFAM acyl-CoA dehydrogenase domain protein - - - 3.608e-243 760.0
MMS3_k127_3456240_4 Fungalysin metallopeptidase (M36) - - - 0.000000000000000000000000000000000000000000000000000000000000000005483 241.0
MMS3_k127_3470339_0 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 588.0
MMS3_k127_3470339_1 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.0000000002613 61.0
MMS3_k127_3472206_0 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 440.0
MMS3_k127_3472206_1 - - - - 0.0000000000000000000000000000000000002232 145.0
MMS3_k127_3472206_2 Smr domain - - - 0.00000000000000000000000000002164 118.0
MMS3_k127_3472206_3 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000001676 102.0
MMS3_k127_3485147_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 3.248e-263 819.0
MMS3_k127_3485147_1 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 561.0
MMS3_k127_3485147_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 422.0
MMS3_k127_3485147_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.00000000000000000000007746 100.0
MMS3_k127_3490843_0 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 3.874e-247 781.0
MMS3_k127_3490843_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 610.0
MMS3_k127_3490843_2 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 591.0
MMS3_k127_3490843_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 552.0
MMS3_k127_3496662_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 485.0
MMS3_k127_3496662_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 372.0
MMS3_k127_3496662_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 293.0
MMS3_k127_3496662_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000009659 159.0
MMS3_k127_3496662_4 Sigma-54 interaction domain K02584 - - 0.00000000000000000000000000006291 134.0
MMS3_k127_349827_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 433.0
MMS3_k127_349827_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 337.0
MMS3_k127_349827_2 SnoaL-like domain - - - 0.000000000000000000000000000000000000438 144.0
MMS3_k127_3500302_0 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001401 263.0
MMS3_k127_3500302_1 ThiJ/PfpI family-like K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000001129 265.0
MMS3_k127_3500302_2 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000000000006384 233.0
MMS3_k127_3500302_3 Domain of unknown function (DUF4405) - - - 0.000000000000000000000000000000002255 132.0
MMS3_k127_3500302_4 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000001006 119.0
MMS3_k127_3500302_5 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000001782 81.0
MMS3_k127_3500302_6 (ABC) transporter - - - 0.000000000000001053 79.0
MMS3_k127_3508276_0 Voltage gated chloride channel K03281 - - 1.735e-229 723.0
MMS3_k127_3508276_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 311.0
MMS3_k127_3508276_2 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000148 243.0
MMS3_k127_3508276_3 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000000000000000000000000000000000000000000000000008329 194.0
MMS3_k127_3508276_4 Rhomboid family - - - 0.0000000000000000000000000000001725 128.0
MMS3_k127_3530783_0 cysteinyl-tRNA synthetase K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.0 1019.0
MMS3_k127_3530783_1 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 1.189e-257 814.0
MMS3_k127_3530783_10 4Fe-4S binding domain - - - 0.00000000000000000000000000000001574 126.0
MMS3_k127_3530783_11 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000005989 120.0
MMS3_k127_3530783_12 - - - - 0.00000000000000001158 94.0
MMS3_k127_3530783_2 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 5.265e-238 746.0
MMS3_k127_3530783_3 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 624.0
MMS3_k127_3530783_4 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 405.0
MMS3_k127_3530783_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000137 238.0
MMS3_k127_3530783_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001212 233.0
MMS3_k127_3530783_7 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000001077 214.0
MMS3_k127_3530783_8 Belongs to the bacterial histone-like protein family K05788 - - 0.000000000000000000000000000000000000000003779 156.0
MMS3_k127_3530783_9 - - - - 0.000000000000000000000000000000000009123 138.0
MMS3_k127_3534338_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.453e-258 805.0
MMS3_k127_3534338_1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 349.0
MMS3_k127_3534338_2 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 322.0
MMS3_k127_3534338_3 - - - - 0.0000000000000000000000000000000000000000000000000000005095 203.0
MMS3_k127_3534338_4 metal cluster binding K06940 - - 0.00000000000000000000000000000000000000000000000000001692 193.0
MMS3_k127_3534338_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000002468 195.0
MMS3_k127_3534338_6 UPF0056 membrane protein K05595 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000001485 186.0
MMS3_k127_3534338_7 COG3040 Bacterial lipocalin K03098 - - 0.00000000000000000000000000000000000000000002014 169.0
MMS3_k127_3534338_8 Bacterial SH3 domain homologues K07184 - - 0.0000000000000000000000001527 114.0
MMS3_k127_3534338_9 SMART Cold shock protein K03704 - - 0.00000000000000000000005004 100.0
MMS3_k127_3542962_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 1.577e-306 967.0
MMS3_k127_3542962_1 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 2.645e-213 670.0
MMS3_k127_3542962_2 PFAM Histone deacetylase K04768 - - 1.715e-210 662.0
MMS3_k127_3542962_3 PFAM Hydantoinase oxoprolinase - - - 5.356e-209 668.0
MMS3_k127_3542962_4 class II (D K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 334.0
MMS3_k127_3542962_5 PFAM CMP dCMP deaminase zinc-binding K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000003091 198.0
MMS3_k127_3542962_6 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000158 187.0
MMS3_k127_3542962_7 PilZ domain - - - 0.00000000000000000000000000000000004575 140.0
MMS3_k127_3549813_0 BadF BadG BcrA BcrD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 568.0
MMS3_k127_3549813_1 Carbamoyl-phosphate synthetase large chain domain protein K01958 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 441.0
MMS3_k127_3549813_2 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 339.0
MMS3_k127_3549813_3 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 336.0
MMS3_k127_3549813_4 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000009983 206.0
MMS3_k127_3553229_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 5.424e-197 619.0
MMS3_k127_3553229_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 293.0
MMS3_k127_3553229_2 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 288.0
MMS3_k127_3553229_3 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.00000000000000000000000000000000000000000000000000000000005868 209.0
MMS3_k127_3553229_4 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000000000000000000000000009455 151.0
MMS3_k127_3553229_5 Protein conserved in bacteria - - - 0.0000001749 55.0
MMS3_k127_3553296_0 Protein of unknown function (DUF933) K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 393.0
MMS3_k127_3553296_1 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 323.0
MMS3_k127_3553296_2 phosphomethylpyrimidine kinase activity K00941,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000007916 233.0
MMS3_k127_3553296_3 ANTAR - - - 0.000000002994 59.0
MMS3_k127_3557154_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1142.0
MMS3_k127_3557154_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 439.0
MMS3_k127_3557154_10 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000001063 171.0
MMS3_k127_3557154_11 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000005717 119.0
MMS3_k127_3557154_12 - - - - 0.00000000004256 66.0
MMS3_k127_3557154_2 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 423.0
MMS3_k127_3557154_3 PFAM nucleoside H symporter K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 416.0
MMS3_k127_3557154_4 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 391.0
MMS3_k127_3557154_5 PFAM MltA K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 367.0
MMS3_k127_3557154_6 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 360.0
MMS3_k127_3557154_7 Signal transduction response regulator, receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 293.0
MMS3_k127_3557154_8 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000004844 235.0
MMS3_k127_3557154_9 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000004235 216.0
MMS3_k127_3562962_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 380.0
MMS3_k127_3562962_1 Biotin carboxylase, N-terminal domain K01958 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 367.0
MMS3_k127_3562962_2 SMART serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 312.0
MMS3_k127_3562962_3 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007879 263.0
MMS3_k127_3562962_4 SMART serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000001719 132.0
MMS3_k127_3562962_5 secretion system protein G K02456 - - 0.000002205 50.0
MMS3_k127_3563953_0 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 335.0
MMS3_k127_3563953_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 312.0
MMS3_k127_3563953_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004666 279.0
MMS3_k127_3563953_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000002424 196.0
MMS3_k127_3567807_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 439.0
MMS3_k127_3567807_1 Na alanine symporter K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 430.0
MMS3_k127_3567807_2 sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000009926 245.0
MMS3_k127_3567807_3 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000003464 222.0
MMS3_k127_3567807_4 dehydratase K09709 - 4.2.1.153 0.00000000000000000000000000000000006823 141.0
MMS3_k127_3567807_5 MaoC like domain - - - 0.000000000000000000000000003891 115.0
MMS3_k127_3568540_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007937 566.0
MMS3_k127_3568540_1 glycosyl transferase family 2 K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 298.0
MMS3_k127_3568540_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003652 252.0
MMS3_k127_3568540_3 YdjC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003758 246.0
MMS3_k127_3568540_4 PilZ domain - - - 0.00000000005759 69.0
MMS3_k127_3568943_0 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 612.0
MMS3_k127_3568943_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 438.0
MMS3_k127_3568943_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 389.0
MMS3_k127_3568943_3 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001337 280.0
MMS3_k127_3568943_4 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000002892 187.0
MMS3_k127_3568943_5 - - - - 0.0000000000000000000000000000449 117.0
MMS3_k127_3568943_6 TIGRFAM geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.00000002608 66.0
MMS3_k127_3596885_0 Belongs to the ClpX chaperone family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 613.0
MMS3_k127_3596885_1 signal transduction histidine kinase K07678 - 2.7.13.3 0.00000000000000000000000005235 112.0
MMS3_k127_3596885_2 Dodecin K09165 - - 0.0000000000000000000002633 97.0
MMS3_k127_3596885_3 - - - - 0.000000000631 64.0
MMS3_k127_3600178_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1196.0
MMS3_k127_3600178_1 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002977 281.0
MMS3_k127_3600178_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000006597 138.0
MMS3_k127_3600951_0 Acyl-CoA dehydrogenase N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001821 259.0
MMS3_k127_3600951_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000009666 224.0
MMS3_k127_3605163_0 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 381.0
MMS3_k127_3605163_1 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007922 266.0
MMS3_k127_3605163_2 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000006336 201.0
MMS3_k127_3606945_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 317.0
MMS3_k127_3606945_1 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000003277 71.0
MMS3_k127_3606945_2 VirC1 protein K03496 - - 0.000000008146 65.0
MMS3_k127_3615068_0 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 506.0
MMS3_k127_3615068_1 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 340.0
MMS3_k127_3615068_2 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000000000000000000000000000001448 186.0
MMS3_k127_3615068_3 Outer membrane efflux protein - - - 0.0000006764 55.0
MMS3_k127_361646_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1036.0
MMS3_k127_361646_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K00658 - 2.3.1.12,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 454.0
MMS3_k127_361646_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 293.0
MMS3_k127_361646_3 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008475 272.0
MMS3_k127_361646_4 Hydrolases of the alpha beta superfamily K06889,K07397 - - 0.000000000000000000000000000000000000000000000000002346 192.0
MMS3_k127_3617506_0 MCM2/3/5 family K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 347.0
MMS3_k127_3617506_1 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000437 250.0
MMS3_k127_3617506_2 Stage II sporulation protein M - - - 0.00000000000000000000000000000000000000000000004278 182.0
MMS3_k127_3617506_3 RDD family - - - 0.00000000000000000000000000000003463 137.0
MMS3_k127_3617506_4 - - - - 0.00000000007692 74.0
MMS3_k127_363071_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 611.0
MMS3_k127_363071_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 353.0
MMS3_k127_363071_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000003267 178.0
MMS3_k127_363071_3 alginic acid biosynthetic process K01406 - 3.4.24.40 0.00000001402 57.0
MMS3_k127_3630907_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0 1013.0
MMS3_k127_3630907_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 1.88e-296 928.0
MMS3_k127_3630907_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 - 1.559e-285 889.0
MMS3_k127_3630907_3 flavodoxin nitric oxide synthase - - - 6.614e-199 625.0
MMS3_k127_3630907_4 Bacterial virulence protein (VirJ) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 508.0
MMS3_k127_3630907_5 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 351.0
MMS3_k127_3630907_6 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003269 232.0
MMS3_k127_3630907_7 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000007227 206.0
MMS3_k127_3633334_0 ABC-type uncharacterized transport system - - - 1.892e-225 722.0
MMS3_k127_3633334_1 TIGRFAM TraB family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 456.0
MMS3_k127_3633334_2 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 384.0
MMS3_k127_3633334_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 330.0
MMS3_k127_3633334_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 332.0
MMS3_k127_3633334_5 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000001442 183.0
MMS3_k127_3638349_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1482.0
MMS3_k127_3638349_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.54e-225 702.0
MMS3_k127_3638349_10 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000008558 254.0
MMS3_k127_3638349_11 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000007071 201.0
MMS3_k127_3638349_12 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000001126 148.0
MMS3_k127_3638349_13 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000003086 115.0
MMS3_k127_3638349_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 508.0
MMS3_k127_3638349_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 483.0
MMS3_k127_3638349_4 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 399.0
MMS3_k127_3638349_5 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 396.0
MMS3_k127_3638349_6 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 379.0
MMS3_k127_3638349_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 355.0
MMS3_k127_3638349_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 330.0
MMS3_k127_3638349_9 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 301.0
MMS3_k127_3643036_0 mannose-1-phosphate guanylyltransferase K00971,K16011 GO:0000271,GO:0003674,GO:0003824,GO:0004475,GO:0005975,GO:0005976,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008905,GO:0008928,GO:0009058,GO:0009059,GO:0009242,GO:0009628,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046377,GO:0050896,GO:0070568,GO:0071704,GO:1901135,GO:1901137,GO:1901576 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 415.0
MMS3_k127_3643036_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 340.0
MMS3_k127_3643036_2 Domain of unknown function (DUF296) - - - 0.000000000000000000000000000000000000000000000000002649 184.0
MMS3_k127_3643036_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000001513 163.0
MMS3_k127_3643036_4 Histidine Phosphotransfer domain K11527 - 2.7.13.3 0.00000000000007882 76.0
MMS3_k127_3643832_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 1.659e-272 864.0
MMS3_k127_3643832_1 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 1.511e-263 823.0
MMS3_k127_3643832_2 PFAM aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 536.0
MMS3_k127_3643832_3 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008637 511.0
MMS3_k127_3643832_4 Belongs to the DapB family K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 361.0
MMS3_k127_3643832_5 - - - - 0.000000000000000000000000004653 113.0
MMS3_k127_3660858_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 6.888e-248 773.0
MMS3_k127_3660858_1 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 406.0
MMS3_k127_3660858_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001256 283.0
MMS3_k127_3663612_0 molybdenum-iron protein alpha chain K02586 - 1.18.6.1 8.846e-296 914.0
MMS3_k127_3663612_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.4e-233 732.0
MMS3_k127_3663612_10 Belongs to the P(II) protein family K02590 - - 0.0000000000000000000000000000000000000000000000000005504 188.0
MMS3_k127_3663612_11 Ferredoxin - - - 0.000000000000000000000000000000000000000000000001501 174.0
MMS3_k127_3663612_12 Domain of unknown function (DUF4388) K03413 - - 0.00000000000000000000000000000000000000002934 170.0
MMS3_k127_3663612_13 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000001449 156.0
MMS3_k127_3663612_14 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase K15022 - 1.17.1.10 0.0000000000000000000000528 102.0
MMS3_k127_3663612_15 Acetyltransferase (GNAT) domain - - - 0.00000000000000003178 88.0
MMS3_k127_3663612_2 Belongs to the NifD NifK NifE NifN family K02587 - - 4.571e-228 714.0
MMS3_k127_3663612_3 GAF domain K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 601.0
MMS3_k127_3663612_4 Belongs to the NifD NifK NifE NifN family K02592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 554.0
MMS3_k127_3663612_5 cofactor biosynthesis protein NifB K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 539.0
MMS3_k127_3663612_6 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 496.0
MMS3_k127_3663612_7 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 360.0
MMS3_k127_3663612_8 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 329.0
MMS3_k127_3663612_9 Belongs to the P(II) protein family K02589 - - 0.000000000000000000000000000000000000000000000000000001245 196.0
MMS3_k127_3666165_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 372.0
MMS3_k127_3666165_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 358.0
MMS3_k127_3666165_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000004889 249.0
MMS3_k127_3666165_3 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000006258 167.0
MMS3_k127_3701253_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 475.0
MMS3_k127_3701253_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000003023 178.0
MMS3_k127_3701253_2 - - - - 0.0000000000000000000000000000000003602 141.0
MMS3_k127_3701341_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 572.0
MMS3_k127_3701341_1 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 413.0
MMS3_k127_3701341_2 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001551 243.0
MMS3_k127_3701341_3 Chalcone isomerase-like - - - 0.00000000000000000000000000000000001119 152.0
MMS3_k127_3701341_4 Methyltransferase domain - - - 0.00000000000007735 72.0
MMS3_k127_3701341_5 Belongs to the ompA family K03640 - - 0.0000000008791 71.0
MMS3_k127_3713055_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 4.512e-237 741.0
MMS3_k127_3713055_1 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 319.0
MMS3_k127_3713055_2 leucyltransferase activity K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 306.0
MMS3_k127_3713055_3 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000004447 205.0
MMS3_k127_3714370_0 Belongs to the IlvD Edd family K01687,K22396 - 4.2.1.82,4.2.1.9 1.154e-228 719.0
MMS3_k127_3714370_1 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001393 258.0
MMS3_k127_3714370_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000005261 168.0
MMS3_k127_3714370_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000006008 153.0
MMS3_k127_3723246_0 Alkyl sulfatase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 565.0
MMS3_k127_3723246_1 Biological Process cation transport (GO 0006812), Molecular Function solute hydrogen antiporter activity (GO 0015299), Cellular Component integral to membrane (GO 0016021), Biological Process transmembrane transport (GO 0055085) K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 501.0
MMS3_k127_3723246_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 411.0
MMS3_k127_3723246_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000003583 173.0
MMS3_k127_3727559_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.015e-286 887.0
MMS3_k127_3727559_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 534.0
MMS3_k127_3727559_10 Methyltransferase small domain K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000000003283 227.0
MMS3_k127_3727559_11 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001077 218.0
MMS3_k127_3727559_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000001645 198.0
MMS3_k127_3727559_13 PFAM adenylate cyclase K05873 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000006733 196.0
MMS3_k127_3727559_14 - - - - 0.0000000000000000000000000000000000000000000000000303 184.0
MMS3_k127_3727559_15 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000435 183.0
MMS3_k127_3727559_16 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000001276 168.0
MMS3_k127_3727559_17 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000002705 154.0
MMS3_k127_3727559_18 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000006344 155.0
MMS3_k127_3727559_19 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000002319 148.0
MMS3_k127_3727559_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 495.0
MMS3_k127_3727559_20 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000004362 147.0
MMS3_k127_3727559_21 TonB C terminal K03646,K03832 - - 0.000000000000000000000000000008478 130.0
MMS3_k127_3727559_22 GGDEF domain - - - 0.000000000000000000000000004467 113.0
MMS3_k127_3727559_23 regulatory protein, FmdB family - - - 0.0000000000000000000000116 103.0
MMS3_k127_3727559_24 Protein of unknown function (DUF721) - - - 0.00000000000006797 76.0
MMS3_k127_3727559_26 Mitochondrial domain of unknown function (DUF1713) - - - 0.00000004088 55.0
MMS3_k127_3727559_3 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 500.0
MMS3_k127_3727559_4 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 362.0
MMS3_k127_3727559_5 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 296.0
MMS3_k127_3727559_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001188 270.0
MMS3_k127_3727559_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000003652 255.0
MMS3_k127_3727559_8 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004348 257.0
MMS3_k127_3727559_9 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001379 247.0
MMS3_k127_3728583_0 Coenzyme A transferase K01026 - 2.8.3.1 8.039e-259 809.0
MMS3_k127_3744013_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 2.335e-221 708.0
MMS3_k127_3744013_1 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 456.0
MMS3_k127_3744013_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004102 269.0
MMS3_k127_3744013_3 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000001703 267.0
MMS3_k127_3744013_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001177 259.0
MMS3_k127_3744013_5 - - - - 0.0000000000000000000000000000000003425 139.0
MMS3_k127_3744013_6 Sh3 type 3 domain protein - - - 0.0000000000001088 84.0
MMS3_k127_3744013_7 Protein of unknown function (DUF1329) - - - 0.0000000000004805 80.0
MMS3_k127_3749268_0 Anthranilate synthase component I domain protein K01665 - 2.6.1.85 4.984e-218 693.0
MMS3_k127_3749268_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000001185 240.0
MMS3_k127_3750321_0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 543.0
MMS3_k127_3750321_1 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 525.0
MMS3_k127_3750321_10 - - - - 0.000002355 56.0
MMS3_k127_3750321_11 - - - - 0.0000621 48.0
MMS3_k127_3750321_12 Transposase IS66 family K07484 - - 0.0001477 46.0
MMS3_k127_3750321_2 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 386.0
MMS3_k127_3750321_3 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 302.0
MMS3_k127_3750321_4 MaoC like domain K17865 - 4.2.1.55 0.000000000000000000000000000000000000000000000000000000000000004989 219.0
MMS3_k127_3750321_5 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000002593 192.0
MMS3_k127_3750321_6 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.00000000000000000000000000000000000000000000000000115 194.0
MMS3_k127_3750321_7 PHB/PHA accumulation regulator DNA-binding domain - - - 0.000000000000000000000000000000000000002692 151.0
MMS3_k127_3750321_8 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000003355 150.0
MMS3_k127_3750321_9 - - - - 0.000000000000000002858 89.0
MMS3_k127_3751909_0 Aldehyde dehydrogenase family K00130 - 1.2.1.8 0.0 1256.0
MMS3_k127_3751909_1 Biotin carboxylase - - - 2.129e-252 797.0
MMS3_k127_3751909_2 2-nitropropane dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 405.0
MMS3_k127_3751909_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000756 394.0
MMS3_k127_3751909_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000001919 227.0
MMS3_k127_3751909_5 Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four- carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000001997 198.0
MMS3_k127_3751909_6 Bacterial membrane protein YfhO - - - 0.00000000000000000000000000000000000000000005105 183.0
MMS3_k127_3751909_7 PFAM Iron-sulphur cluster biosynthesis - - - 0.000000000000000001691 91.0
MMS3_k127_3769148_0 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 359.0
MMS3_k127_3769148_1 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000001238 146.0
MMS3_k127_3777493_0 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000005216 244.0
MMS3_k127_3777493_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000003236 239.0
MMS3_k127_380148_0 Squalene-hopene cyclase C-terminal domain K01852,K06045 - 4.2.1.129,5.4.99.17,5.4.99.7 2.588e-286 893.0
MMS3_k127_380148_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 7.787e-283 882.0
MMS3_k127_380148_2 Domain of unknown function (DUF3463) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 419.0
MMS3_k127_380148_3 Phosphorylase superfamily K01243 - 3.2.2.9 0.00000000182 64.0
MMS3_k127_380148_4 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K18284 - 3.2.2.30,3.2.2.9 0.0007876 47.0
MMS3_k127_3808530_0 Urea transporter - - - 3.093e-249 787.0
MMS3_k127_3808530_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 7.263e-224 700.0
MMS3_k127_3808530_10 Transcriptional regulatory protein, C terminal K07664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002525 268.0
MMS3_k127_3808530_11 transcriptional regulator, AsnC family - - - 0.00000000000000000000000000000000000000000000000000000000000003198 217.0
MMS3_k127_3808530_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000009928 199.0
MMS3_k127_3808530_13 Pas domain K02484,K07645,K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000001647 196.0
MMS3_k127_3808530_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000042 177.0
MMS3_k127_3808530_15 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000002 150.0
MMS3_k127_3808530_16 DoxX - - - 0.000000000000000000000000000007891 124.0
MMS3_k127_3808530_17 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000000000001051 96.0
MMS3_k127_3808530_18 Galactose oxidase, central domain - - - 0.0008102 52.0
MMS3_k127_3808530_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 565.0
MMS3_k127_3808530_3 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 541.0
MMS3_k127_3808530_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 501.0
MMS3_k127_3808530_5 ATP-grasp domain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 490.0
MMS3_k127_3808530_6 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 452.0
MMS3_k127_3808530_7 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 449.0
MMS3_k127_3808530_8 Histidine kinase HAMP K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009209 391.0
MMS3_k127_3808530_9 Alcohol dehydrogenase GroES-like domain K00004 - 1.1.1.303,1.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 344.0
MMS3_k127_3809542_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 582.0
MMS3_k127_3809542_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 432.0
MMS3_k127_3809542_2 Tagatose 6 phosphate kinase K16371 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 361.0
MMS3_k127_3809542_3 LUD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 302.0
MMS3_k127_3809542_4 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000003453 239.0
MMS3_k127_3809542_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000005251 224.0
MMS3_k127_3809542_6 TIGRFAM conserved - - - 0.000000000000000000000000000000000000000000001492 184.0
MMS3_k127_3809542_7 4Fe-4S binding domain K00171 - 1.2.7.1 0.00000000000000000000000000000000000000005128 153.0
MMS3_k127_3809542_8 Natural resistance-associated macrophage protein K03322 - - 0.000000000000000000000000000000004274 129.0
MMS3_k127_3811430_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2164.0
MMS3_k127_3811430_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2090.0
MMS3_k127_3811430_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.216e-239 743.0
MMS3_k127_3811430_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000008171 234.0
MMS3_k127_3811430_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000004933 235.0
MMS3_k127_3811430_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001312 232.0
MMS3_k127_3811430_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000001567 197.0
MMS3_k127_381531_0 Integrin alpha (beta-propellor repeats). - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 426.0
MMS3_k127_381531_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 359.0
MMS3_k127_381531_2 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 338.0
MMS3_k127_381531_3 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 299.0
MMS3_k127_381531_4 WbqC-like protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004935 279.0
MMS3_k127_381531_5 LmbE homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002666 263.0
MMS3_k127_381531_6 Type II secretory pathway component ExeA - - - 0.0000000000000000000000000000000000000000000000000000000000000003991 229.0
MMS3_k127_381531_7 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000004881 231.0
MMS3_k127_381531_8 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000003567 99.0
MMS3_k127_381531_9 NUBPL iron-transfer P-loop NTPase K16554 - - 0.000000000955 61.0
MMS3_k127_3821666_0 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 484.0
MMS3_k127_3821666_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 355.0
MMS3_k127_3821666_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 344.0
MMS3_k127_3824305_0 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 333.0
MMS3_k127_3824305_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 306.0
MMS3_k127_3824305_2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - - 0.000000000000000000000000000000000000000004725 166.0
MMS3_k127_3824305_3 Cytidylyltransferase-like - - - 0.0000000000000003139 84.0
MMS3_k127_3824305_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 GO:0000002,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006605,GO:0006612,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0006810,GO:0006873,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0019725,GO:0030572,GO:0031224,GO:0032048,GO:0032049,GO:0033036,GO:0034613,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045017,GO:0045184,GO:0046471,GO:0046474,GO:0046486,GO:0046907,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055082,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072657,GO:0090150,GO:0090407,GO:1901576 2.7.8.41 0.00000001375 63.0
MMS3_k127_3824305_5 Methyltransferase K16868 - 2.1.1.265 0.000003708 59.0
MMS3_k127_3824305_6 - - - - 0.0001036 50.0
MMS3_k127_384138_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 5.469e-198 623.0
MMS3_k127_384138_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 362.0
MMS3_k127_384138_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 334.0
MMS3_k127_384138_3 PFAM Phosphoglycerate mutase - - - 0.000000000000000000000000000000000000000000000000000000001532 208.0
MMS3_k127_384138_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000003587 125.0
MMS3_k127_3858821_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009806 556.0
MMS3_k127_3858821_2 CobQ CobB MinD ParA nucleotide binding domain - - - 0.000002986 50.0
MMS3_k127_3861936_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 501.0
MMS3_k127_3861936_1 acyl-CoA thioesterase II K10805 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 452.0
MMS3_k127_3861936_2 Transcriptional regulator, TraR DksA family - - - 0.0000000000000000000000000000000000007179 140.0
MMS3_k127_3861936_3 Alternative locus ID - - - 0.00000006486 58.0
MMS3_k127_3864244_0 Sensor diguanylate cyclase, PAS domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 331.0
MMS3_k127_3864244_1 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 317.0
MMS3_k127_3864244_2 Alpha/beta hydrolase family K01048 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004884 281.0
MMS3_k127_3864244_3 PFAM Metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000546 239.0
MMS3_k127_3864244_4 Thermophilic metalloprotease (M29) K19689 - - 0.000000000000000000000000005719 114.0
MMS3_k127_3864244_5 - - - - 0.0000000000000000000253 93.0
MMS3_k127_3864244_6 Ami_3 - - - 0.00004963 53.0
MMS3_k127_3880108_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1137.0
MMS3_k127_3880108_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 546.0
MMS3_k127_3880108_10 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000001579 220.0
MMS3_k127_3880108_11 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000006518 213.0
MMS3_k127_3880108_12 - - - - 0.000000000000000000000000000000000000000000000009569 187.0
MMS3_k127_3880108_13 - - - - 0.00000000000000000000000000002159 120.0
MMS3_k127_3880108_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 481.0
MMS3_k127_3880108_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 474.0
MMS3_k127_3880108_4 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 434.0
MMS3_k127_3880108_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 448.0
MMS3_k127_3880108_6 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 359.0
MMS3_k127_3880108_7 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 334.0
MMS3_k127_3880108_8 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004554 269.0
MMS3_k127_3880108_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004452 288.0
MMS3_k127_3892555_0 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 466.0
MMS3_k127_3892555_1 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000003584 145.0
MMS3_k127_3892555_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000005325 111.0
MMS3_k127_3893296_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1295.0
MMS3_k127_3893296_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 9.019e-308 952.0
MMS3_k127_3893296_2 Rhomboid family K07059 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 364.0
MMS3_k127_3893296_3 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 336.0
MMS3_k127_3893296_4 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 304.0
MMS3_k127_3893296_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000006658 239.0
MMS3_k127_3893296_6 PFAM Appr-1-p processing domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004465 229.0
MMS3_k127_3893296_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000004022 222.0
MMS3_k127_3893296_8 Belongs to the HesB IscA family - - - 0.000000000000007538 76.0
MMS3_k127_3893344_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 406.0
MMS3_k127_3893344_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 357.0
MMS3_k127_3893344_2 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000003727 265.0
MMS3_k127_3893344_3 glyoxalase III activity - - - 0.0000000000000000009194 93.0
MMS3_k127_3897686_0 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 367.0
MMS3_k127_3897686_1 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 344.0
MMS3_k127_3897686_10 - K02009 - - 0.0000000000000000000000000000633 121.0
MMS3_k127_3897686_11 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.0000000000000000000000000003887 116.0
MMS3_k127_3897686_2 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 328.0
MMS3_k127_3897686_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 313.0
MMS3_k127_3897686_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002645 290.0
MMS3_k127_3897686_5 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001009 274.0
MMS3_k127_3897686_6 PFAM Cobalt transport protein K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004684 263.0
MMS3_k127_3897686_7 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000001256 253.0
MMS3_k127_3897686_8 Precorrin-6x reductase CbiJ/CobK K05895 - 1.3.1.106,1.3.1.54 0.000000000000000000000000000000000000000000000000000000000000000002094 235.0
MMS3_k127_3897686_9 Tetrapyrrole (Corrin/Porphyrin) Methylases K03399 - 2.1.1.289 0.000000000000000000000000000000000000000000000002065 185.0
MMS3_k127_3901828_0 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 388.0
MMS3_k127_3901828_1 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 360.0
MMS3_k127_3901828_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001557 273.0
MMS3_k127_3909437_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.787e-301 937.0
MMS3_k127_3909437_1 Serine Threonine protein kinase - - - 5.911e-296 970.0
MMS3_k127_3909437_10 - - - - 0.000000001009 70.0
MMS3_k127_3909437_2 Sigma-54 interaction domain K07714,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 603.0
MMS3_k127_3909437_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 474.0
MMS3_k127_3909437_4 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 454.0
MMS3_k127_3909437_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007915 407.0
MMS3_k127_3909437_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003652 255.0
MMS3_k127_3909437_7 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000009174 192.0
MMS3_k127_3909437_8 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000003651 181.0
MMS3_k127_3910155_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 349.0
MMS3_k127_3910155_2 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.000000000000000000000000000000000000000000000000001831 187.0
MMS3_k127_3910155_3 4Fe-4S binding domain - - - 0.000000004289 63.0
MMS3_k127_3919078_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1165.0
MMS3_k127_3919078_1 Domain of unknown function (DUF4445) - - - 1.37e-282 883.0
MMS3_k127_3919078_2 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 348.0
MMS3_k127_3919078_3 CoA binding domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 344.0
MMS3_k127_3919078_4 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000245 280.0
MMS3_k127_3920466_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 4.015e-216 681.0
MMS3_k127_3920466_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000001041 171.0
MMS3_k127_3920466_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000004098 158.0
MMS3_k127_3920466_3 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000000008664 90.0
MMS3_k127_3920581_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 350.0
MMS3_k127_3920581_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001088 254.0
MMS3_k127_3920581_2 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000001443 161.0
MMS3_k127_3922032_0 GMC oxidoreductase K03333 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 1.342e-239 750.0
MMS3_k127_3922032_1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 6.57e-211 671.0
MMS3_k127_3922032_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 292.0
MMS3_k127_3922032_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000003991 220.0
MMS3_k127_3922032_4 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000008938 211.0
MMS3_k127_3933137_0 diguanylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 308.0
MMS3_k127_3933137_1 PFAM peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000153 291.0
MMS3_k127_3933137_2 PFAM Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000236 236.0
MMS3_k127_3934373_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1097.0
MMS3_k127_3934373_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 6.812e-215 676.0
MMS3_k127_3934373_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 564.0
MMS3_k127_3934373_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 381.0
MMS3_k127_3934373_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 381.0
MMS3_k127_3934373_5 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000001312 129.0
MMS3_k127_3934373_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000008367 119.0
MMS3_k127_3934373_7 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000007214 121.0
MMS3_k127_393783_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.222e-266 829.0
MMS3_k127_393783_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 404.0
MMS3_k127_3939326_0 General secretory system II protein E domain protein - - - 2.673e-281 885.0
MMS3_k127_3939326_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 468.0
MMS3_k127_3939326_2 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 454.0
MMS3_k127_3939326_3 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 402.0
MMS3_k127_3939326_4 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 299.0
MMS3_k127_3939326_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000005542 158.0
MMS3_k127_3939326_6 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000006845 138.0
MMS3_k127_3939751_0 Pfam:UPF0118 K03548 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 401.0
MMS3_k127_3939751_1 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008516 267.0
MMS3_k127_3939751_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000001301 256.0
MMS3_k127_3939751_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000007519 218.0
MMS3_k127_3939751_4 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.0000000000000000000000000000000000000000000000000001249 198.0
MMS3_k127_3939751_5 lipase activity K11018 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000004726 192.0
MMS3_k127_3941869_0 acyl-CoA dehydrogenase - - - 1.492e-274 858.0
MMS3_k127_3941869_1 PFAM ABC transporter K15738 - - 1.68e-248 782.0
MMS3_k127_3941869_10 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 445.0
MMS3_k127_3941869_11 Fatty acid desaturase K00496 - 1.14.15.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 305.0
MMS3_k127_3941869_12 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 300.0
MMS3_k127_3941869_13 PFAM isochorismatase hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007148 265.0
MMS3_k127_3941869_14 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000002458 206.0
MMS3_k127_3941869_15 - - - - 0.00000000000000000000000000000000000000000000000000001372 198.0
MMS3_k127_3941869_16 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000005095 192.0
MMS3_k127_3941869_17 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000001054 163.0
MMS3_k127_3941869_18 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000000001317 138.0
MMS3_k127_3941869_19 Domain of unknown function (DUF3783) - - - 0.00000000000000000000000000000004647 128.0
MMS3_k127_3941869_2 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 2.78e-246 767.0
MMS3_k127_3941869_20 MaoC like domain - - - 0.0000000000000000000000005489 105.0
MMS3_k127_3941869_22 to Saccharomyces cerevisiae ADY2 (YCR010C) and ATO2 (YNR002C) K07034 GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005886,GO:0006066,GO:0006067,GO:0006068,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006846,GO:0006847,GO:0006855,GO:0008028,GO:0008150,GO:0008152,GO:0008324,GO:0008509,GO:0008514,GO:0008519,GO:0009056,GO:0009987,GO:0015075,GO:0015123,GO:0015238,GO:0015318,GO:0015696,GO:0015711,GO:0015718,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0016999,GO:0017001,GO:0017144,GO:0019740,GO:0022857,GO:0031224,GO:0034220,GO:0034308,GO:0034310,GO:0035433,GO:0042221,GO:0042493,GO:0042737,GO:0042891,GO:0042895,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046164,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072488,GO:0098655,GO:0098656,GO:1901575,GO:1901615,GO:1901616,GO:1903825,GO:1905039 - 0.0000000002738 68.0
MMS3_k127_3941869_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.678e-245 765.0
MMS3_k127_3941869_4 PFAM sigma-54 factor interaction domain-containing protein - - - 2.222e-216 687.0
MMS3_k127_3941869_5 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 1.451e-213 679.0
MMS3_k127_3941869_6 transport system, permease and ATPase K02471 - - 5.654e-208 665.0
MMS3_k127_3941869_7 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 589.0
MMS3_k127_3941869_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 554.0
MMS3_k127_3941869_9 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 469.0
MMS3_k127_3942978_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.701e-270 839.0
MMS3_k127_3957558_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 526.0
MMS3_k127_3957558_1 COG0666 FOG Ankyrin repeat K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 321.0
MMS3_k127_3957558_2 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000257 244.0
MMS3_k127_3957558_3 protein histidine kinase activity K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000004322 202.0
MMS3_k127_3957558_4 Histidine kinase - - - 0.0000000000000000000000000000000001697 147.0
MMS3_k127_3957558_5 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000002111 130.0
MMS3_k127_3957558_6 PFAM Outer membrane K06142 - - 0.0000000000000000000003343 102.0
MMS3_k127_3957558_7 TIGRFAM TIGR00266 family protein - - - 0.00000008285 55.0
MMS3_k127_3958900_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 5.052e-303 935.0
MMS3_k127_3958900_1 - - - - 0.00000000000000000000000000000000000000000001999 165.0
MMS3_k127_3974450_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1011.0
MMS3_k127_3974450_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008308 555.0
MMS3_k127_3974450_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 547.0
MMS3_k127_3974450_3 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 436.0
MMS3_k127_3974450_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000006971 261.0
MMS3_k127_3974450_5 - - - - 0.00000000000000006234 81.0
MMS3_k127_397573_0 deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 424.0
MMS3_k127_397573_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 339.0
MMS3_k127_397573_2 HAD-hyrolase-like K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000009758 243.0
MMS3_k127_397573_3 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000004919 221.0
MMS3_k127_398094_0 PFAM CoA-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 447.0
MMS3_k127_398094_1 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 347.0
MMS3_k127_398094_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003451 256.0
MMS3_k127_398094_3 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000009766 178.0
MMS3_k127_4011308_0 CheY-like receiver, AAA-type ATPase, and DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055 504.0
MMS3_k127_4011308_1 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 473.0
MMS3_k127_4011308_2 - - - - 0.0005261 46.0
MMS3_k127_4015047_0 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003046 257.0
MMS3_k127_4015047_1 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000001409 251.0
MMS3_k127_4015047_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000003899 152.0
MMS3_k127_4015047_3 COGs COG1426 conserved - - - 0.0000001279 63.0
MMS3_k127_4015741_0 Belongs to the heat shock protein 70 family - - - 0.0 1158.0
MMS3_k127_4015741_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 3.038e-272 855.0
MMS3_k127_4015741_10 - - - - 0.0000000000000003857 87.0
MMS3_k127_4015741_11 polysaccharide export K01991,K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000003805 79.0
MMS3_k127_4015741_12 zinc ion binding - - - 0.0000000000004569 73.0
MMS3_k127_4015741_13 - - - - 0.0000000000006677 72.0
MMS3_k127_4015741_14 - - - - 0.00000000001397 69.0
MMS3_k127_4015741_15 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000006057 49.0
MMS3_k127_4015741_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 9.33e-244 762.0
MMS3_k127_4015741_3 Belongs to the heat shock protein 70 family - - - 1.607e-235 744.0
MMS3_k127_4015741_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 6.407e-199 630.0
MMS3_k127_4015741_5 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 301.0
MMS3_k127_4015741_6 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001649 278.0
MMS3_k127_4015741_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000004706 207.0
MMS3_k127_4015741_8 Domain of unknown function (DUF2760) - - - 0.0000000000000000000000000000000000000000000000000003109 194.0
MMS3_k127_4015741_9 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000001701 166.0
MMS3_k127_4016134_0 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 421.0
MMS3_k127_4016134_1 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002616 261.0
MMS3_k127_4016134_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004224 258.0
MMS3_k127_4016134_3 extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000007559 200.0
MMS3_k127_4016134_4 Glutaredoxin K03676 - - 0.00006289 46.0
MMS3_k127_4017421_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 491.0
MMS3_k127_4017421_1 radical SAM domain protein K03716 - 4.1.99.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 469.0
MMS3_k127_4017421_10 PilZ domain - - - 0.0000000000000000000000001251 109.0
MMS3_k127_4017421_11 TPR repeat - - - 0.0000000000000000001298 96.0
MMS3_k127_4017421_2 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 447.0
MMS3_k127_4017421_3 phosphorelay sensor kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 437.0
MMS3_k127_4017421_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 346.0
MMS3_k127_4017421_5 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 334.0
MMS3_k127_4017421_6 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 329.0
MMS3_k127_4017421_7 belongs to the thioredoxin family - - - 0.000000000000000000000000000000000000000000000000000000000000000503 231.0
MMS3_k127_4017421_8 ParB domain protein nuclease K03497 - - 0.0000000000000000000000000000000000000276 156.0
MMS3_k127_4017421_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000002678 130.0
MMS3_k127_4025400_0 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008618 458.0
MMS3_k127_4025400_1 Protein of unknown function (DUF1298) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 400.0
MMS3_k127_4025400_2 Putative serine esterase (DUF676) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003813 264.0
MMS3_k127_4025400_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000002381 216.0
MMS3_k127_4025400_4 PHB/PHA accumulation regulator DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000109 184.0
MMS3_k127_4025400_5 Patatin-like phospholipase - - - 0.0000000000000000000000000000009127 133.0
MMS3_k127_4025400_6 Anion-transporting ATPase - - - 0.0000000000000000009194 93.0
MMS3_k127_4028092_0 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008922 611.0
MMS3_k127_4028092_1 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000002388 112.0
MMS3_k127_4028092_2 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000001979 111.0
MMS3_k127_4028092_3 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000699 71.0
MMS3_k127_4028092_4 SMART Elongator protein 3 MiaB NifB - - - 0.0007555 45.0
MMS3_k127_4051290_0 PFAM CoA-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 524.0
MMS3_k127_4051290_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 402.0
MMS3_k127_4051290_2 Domain of unknown function (DUF1820) - - - 0.000000000000000000000000000000000003432 143.0
MMS3_k127_4057905_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 548.0
MMS3_k127_4059504_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1439.0
MMS3_k127_4059504_1 4Fe-4S dicluster domain - - - 5.48e-228 713.0
MMS3_k127_4059504_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 4.486e-226 708.0
MMS3_k127_4059504_3 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 580.0
MMS3_k127_4059504_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 370.0
MMS3_k127_4059504_5 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004462 261.0
MMS3_k127_4059504_6 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001773 252.0
MMS3_k127_4059504_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008536 249.0
MMS3_k127_4059504_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000004169 191.0
MMS3_k127_4059504_9 - - - - 0.00000000000000000003524 96.0
MMS3_k127_4065519_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 577.0
MMS3_k127_4065519_1 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 532.0
MMS3_k127_4065519_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 351.0
MMS3_k127_4065519_3 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 311.0
MMS3_k127_4065519_4 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 305.0
MMS3_k127_407831_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.76e-288 893.0
MMS3_k127_407831_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 372.0
MMS3_k127_407831_2 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001487 221.0
MMS3_k127_407831_3 - - - - 0.0000000000000000000000000000000000000007621 152.0
MMS3_k127_408758_0 Evidence 5 No homology to any previously reported sequences K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 383.0
MMS3_k127_408758_1 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000001788 119.0
MMS3_k127_4111901_0 amino acid K03294 - - 1.436e-210 677.0
MMS3_k127_4111901_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 551.0
MMS3_k127_4111901_10 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000000000000000000000000000000001157 172.0
MMS3_k127_4111901_12 PFAM GAF domain protein - - - 0.000000000000000000000000000003444 132.0
MMS3_k127_4111901_13 Universal stress protein family - - - 0.00000000000003187 78.0
MMS3_k127_4111901_14 TIGRFAM pheromone shutdown-related protein TraB - - - 0.00000000001114 69.0
MMS3_k127_4111901_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 510.0
MMS3_k127_4111901_3 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 479.0
MMS3_k127_4111901_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 465.0
MMS3_k127_4111901_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 387.0
MMS3_k127_4111901_6 PFAM Pyruvate phosphate dikinase, PEP pyruvate-binding K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 374.0
MMS3_k127_4111901_7 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006102 276.0
MMS3_k127_4111901_8 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000006201 184.0
MMS3_k127_4111901_9 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000004883 179.0
MMS3_k127_4136259_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 594.0
MMS3_k127_4136259_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 527.0
MMS3_k127_4136259_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 318.0
MMS3_k127_4136259_3 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000001993 238.0
MMS3_k127_4136259_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000001464 236.0
MMS3_k127_4136259_5 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000003777 216.0
MMS3_k127_4136259_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000006356 100.0
MMS3_k127_4136259_7 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000002505 92.0
MMS3_k127_4143435_0 BadF BadG BcrA BcrD - - - 0.0 1225.0
MMS3_k127_4148452_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 355.0
MMS3_k127_4148452_1 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003307 288.0
MMS3_k127_4148452_2 Sigma-54 interaction domain K02584 - - 0.00004754 45.0
MMS3_k127_4167856_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 7.325e-216 677.0
MMS3_k127_4167856_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 432.0
MMS3_k127_4167856_10 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000006666 196.0
MMS3_k127_4167856_11 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000001478 171.0
MMS3_k127_4167856_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000001002 164.0
MMS3_k127_4167856_13 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000005339 162.0
MMS3_k127_4167856_14 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000003701 157.0
MMS3_k127_4167856_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000000008699 139.0
MMS3_k127_4167856_16 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003598 136.0
MMS3_k127_4167856_17 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000575 134.0
MMS3_k127_4167856_18 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000001616 128.0
MMS3_k127_4167856_19 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000003385 108.0
MMS3_k127_4167856_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 342.0
MMS3_k127_4167856_20 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000188 106.0
MMS3_k127_4167856_21 Ribosomal protein L30p/L7e K02907 - - 0.00000000000000003311 83.0
MMS3_k127_4167856_22 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000003585 74.0
MMS3_k127_4167856_23 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000001227 68.0
MMS3_k127_4167856_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 289.0
MMS3_k127_4167856_4 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002824 275.0
MMS3_k127_4167856_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000284 256.0
MMS3_k127_4167856_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000004742 233.0
MMS3_k127_4167856_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000002579 224.0
MMS3_k127_4167856_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002765 218.0
MMS3_k127_4167856_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001715 208.0
MMS3_k127_4181020_0 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 624.0
MMS3_k127_4181020_1 Carbohydrate phosphorylase K00688 GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 557.0
MMS3_k127_4181020_10 30S ribosomal protein Thx K19033 - - 0.0003798 44.0
MMS3_k127_4181020_2 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 404.0
MMS3_k127_4181020_3 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 381.0
MMS3_k127_4181020_4 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 324.0
MMS3_k127_4181020_5 L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 294.0
MMS3_k127_4181020_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000004771 237.0
MMS3_k127_4181020_7 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000001353 229.0
MMS3_k127_4181020_8 - - - - 0.00000000000000000000000000000000000000000165 166.0
MMS3_k127_4181020_9 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000151 111.0
MMS3_k127_4184180_0 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 317.0
MMS3_k127_4184180_1 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 312.0
MMS3_k127_4184180_2 Bacterial transcriptional repressor C-terminal K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009925 270.0
MMS3_k127_4184180_3 Belongs to the proline racemase family K01777 - 5.1.1.4 0.0000000006732 61.0
MMS3_k127_4184180_4 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.0000000008966 61.0
MMS3_k127_4184180_5 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0002626 45.0
MMS3_k127_4191609_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.594e-269 832.0
MMS3_k127_4191609_1 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000005461 186.0
MMS3_k127_419442_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.286e-231 722.0
MMS3_k127_419442_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 347.0
MMS3_k127_419442_2 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000000000000000000529 228.0
MMS3_k127_419442_4 ACT domain - - - 0.000134 44.0
MMS3_k127_4195459_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 1.609e-207 652.0
MMS3_k127_4195459_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 311.0
MMS3_k127_4195459_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane K16076,K18093 - - 0.000000000000000000000000000000001494 132.0
MMS3_k127_420628_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.553e-289 899.0
MMS3_k127_420628_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 499.0
MMS3_k127_420628_10 Elongation factor Tu domain 2 K02355 - - 0.00000000000003154 72.0
MMS3_k127_420628_11 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713,K07714 - - 0.00002597 51.0
MMS3_k127_420628_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 469.0
MMS3_k127_420628_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00972 - 2.7.7.23,2.7.7.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 461.0
MMS3_k127_420628_4 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 340.0
MMS3_k127_420628_5 Belongs to the BI1 family K06890,K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 317.0
MMS3_k127_420628_6 PFAM ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 315.0
MMS3_k127_420628_7 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713,K07714 - - 0.000000000000000000000000002988 115.0
MMS3_k127_420628_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000004713 100.0
MMS3_k127_420628_9 - - - - 0.00000000000000000004362 93.0
MMS3_k127_4208597_0 alpha amylase catalytic - - - 0.0 1111.0
MMS3_k127_4208597_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 566.0
MMS3_k127_4208597_2 PFAM VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000008741 214.0
MMS3_k127_4208597_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000002539 179.0
MMS3_k127_421264_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.599e-233 734.0
MMS3_k127_421264_1 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 619.0
MMS3_k127_421264_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 597.0
MMS3_k127_421264_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000009368 177.0
MMS3_k127_421264_4 - K09143 - - 0.00000000000000000000000000000000000000000000002105 173.0
MMS3_k127_421264_5 antisigma factor binding K04749,K06378 - - 0.00000000000000000000003876 104.0
MMS3_k127_4212956_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.224e-244 776.0
MMS3_k127_4212956_1 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 300.0
MMS3_k127_4212956_2 PFAM purine or other phosphorylase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000397 207.0
MMS3_k127_4212956_3 - - - - 0.000000000000000000000000000000000000006069 146.0
MMS3_k127_4212956_4 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000000001307 114.0
MMS3_k127_4225331_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 438.0
MMS3_k127_4225331_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002435 235.0
MMS3_k127_4225331_2 Desulfoferrodoxin K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000000000002086 211.0
MMS3_k127_4225331_3 identical protein binding K07285 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0016020,GO:0019867,GO:0042802 - 0.000000000000000000000000000001143 130.0
MMS3_k127_4225331_4 Competence protein K02238 - - 0.0006046 44.0
MMS3_k127_4236874_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 306.0
MMS3_k127_4236874_1 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000003956 237.0
MMS3_k127_4236874_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000006411 199.0
MMS3_k127_4236874_3 PFAM Abortive infection protein K07052 - - 0.00000001333 61.0
MMS3_k127_4241352_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 365.0
MMS3_k127_4241352_1 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000001087 242.0
MMS3_k127_4241352_2 - - - - 0.0000000000000000000000003259 115.0
MMS3_k127_4241352_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000006742 84.0
MMS3_k127_4249909_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 326.0
MMS3_k127_4249909_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002567 273.0
MMS3_k127_4249909_10 Arsenical pump membrane protein K03893 - - 0.000003911 50.0
MMS3_k127_4249909_2 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000005115 226.0
MMS3_k127_4249909_3 - - - - 0.000000000000000000000000000000000000000000000000000000929 197.0
MMS3_k127_4249909_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814,K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000004253 157.0
MMS3_k127_4249909_5 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.000000000000000000000000000009934 124.0
MMS3_k127_4249909_6 Cytidylate kinase-like family - - - 0.00000000000000000000000000008013 126.0
MMS3_k127_4249909_7 lactoylglutathione lyase activity - - - 0.000000000000000000000004146 106.0
MMS3_k127_4249909_8 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000112 85.0
MMS3_k127_4249909_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000001496 74.0
MMS3_k127_4255310_0 Elongation factor Tu domain 2 K06207 - - 3.077e-252 785.0
MMS3_k127_4255310_1 PFAM Thiamine pyrophosphate K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 528.0
MMS3_k127_4261571_0 O-acetylhomoserine sulfhydrylase K01740 - 2.5.1.49 9.279e-194 612.0
MMS3_k127_4261571_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 592.0
MMS3_k127_4261571_10 PFAM response regulator receiver - - - 0.0000000000000000001618 95.0
MMS3_k127_4261571_11 Formiminotransferase-cyclodeaminase - - - 0.0000000002015 69.0
MMS3_k127_4261571_2 TIGRFAM cysteine synthase A K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 453.0
MMS3_k127_4261571_3 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 432.0
MMS3_k127_4261571_4 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 409.0
MMS3_k127_4261571_5 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 312.0
MMS3_k127_4261571_6 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 287.0
MMS3_k127_4261571_7 PFAM Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000003389 151.0
MMS3_k127_4261571_8 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000003941 154.0
MMS3_k127_4261571_9 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.0000000000000000000000000007166 113.0
MMS3_k127_4272077_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 361.0
MMS3_k127_4272077_1 radical SAM K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000005152 234.0
MMS3_k127_4272077_2 - - - - 0.00000000000000008424 86.0
MMS3_k127_4281250_0 AAA-like domain - - - 3.652e-290 904.0
MMS3_k127_4281250_1 FGGY family of carbohydrate kinases, N-terminal domain - - - 1.178e-231 727.0
MMS3_k127_4281250_2 Acyl-CoA dehydrogenase type 2 domain K00249,K11731 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 582.0
MMS3_k127_4281250_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 428.0
MMS3_k127_4281250_4 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 391.0
MMS3_k127_4281250_5 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 322.0
MMS3_k127_4281250_6 fatty acid responsive transcription factor FadR domain protein K03603 - - 0.000000000000000000000000000000000000000000000000000000000000000000004135 242.0
MMS3_k127_4281250_7 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000001451 213.0
MMS3_k127_4281250_8 dehydratase K17865 - 4.2.1.55 0.00000000000000000000000000000000000000000000000000000000036 205.0
MMS3_k127_4287832_0 Asp/Glu/Hydantoin racemase K01779 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 349.0
MMS3_k127_4287832_1 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000004451 242.0
MMS3_k127_4287832_2 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000024 168.0
MMS3_k127_4287832_3 Glutamine amidotransferase class-I - - - 0.000000000000000000000003115 104.0
MMS3_k127_4287832_4 TRL-like protein family - - - 0.000001086 54.0
MMS3_k127_4334210_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 3.557e-281 871.0
MMS3_k127_4334210_1 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000683 473.0
MMS3_k127_4334210_2 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000008406 160.0
MMS3_k127_4334210_3 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000000000000001911 102.0
MMS3_k127_4334210_4 - - - - 0.00000005773 62.0
MMS3_k127_4338745_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 433.0
MMS3_k127_4338745_1 Secretion protein, HlyD K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 391.0
MMS3_k127_4338745_2 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 351.0
MMS3_k127_4338745_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001483 256.0
MMS3_k127_445662_0 Tetratricopeptide TPR_2 - - - 0.0000000000000000000000000000000000000000000000000000000007638 210.0
MMS3_k127_445662_1 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000004165 161.0
MMS3_k127_445662_2 - - - - 0.000000000000000000000000000000000000843 151.0
MMS3_k127_445662_3 LysM domain - - - 0.000000000000000000000000000000006471 143.0
MMS3_k127_446520_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 594.0
MMS3_k127_446520_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 576.0
MMS3_k127_446520_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 305.0
MMS3_k127_446520_3 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000003333 225.0
MMS3_k127_446520_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000002459 217.0
MMS3_k127_446520_5 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000004465 203.0
MMS3_k127_446520_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000003213 132.0
MMS3_k127_446520_7 Dissimilatory sulfite reductase - - - 0.0000000000000000000000000000001068 124.0
MMS3_k127_446520_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.00000000000001387 79.0
MMS3_k127_446591_0 Elongation factor SelB winged helix K03833 - - 2.927e-253 798.0
MMS3_k127_446591_1 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 516.0
MMS3_k127_446591_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 496.0
MMS3_k127_446591_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 431.0
MMS3_k127_446591_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 389.0
MMS3_k127_446591_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007763 352.0
MMS3_k127_446591_6 Polyribonucleotide nucleotidyltransferase - - - 0.00000000000000000000003734 105.0
MMS3_k127_446591_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000001495 49.0
MMS3_k127_460951_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 2.388e-249 775.0
MMS3_k127_460951_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.374e-214 672.0
MMS3_k127_460951_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 470.0
MMS3_k127_460951_3 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002767 273.0
MMS3_k127_460951_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000003036 241.0
MMS3_k127_460951_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000006728 170.0
MMS3_k127_460951_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000002366 146.0
MMS3_k127_477968_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 427.0
MMS3_k127_477968_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 328.0
MMS3_k127_477968_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000005432 218.0
MMS3_k127_480285_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 580.0
MMS3_k127_480285_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 529.0
MMS3_k127_480285_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 451.0
MMS3_k127_480285_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 382.0
MMS3_k127_480285_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000002345 235.0
MMS3_k127_480285_5 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000001436 143.0
MMS3_k127_480285_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000002218 98.0
MMS3_k127_480285_7 Cell division protein FtsL - - - 0.000000000003776 72.0
MMS3_k127_486415_0 Cation transporter/ATPase, N-terminus K01531,K16905 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132 3.6.3.2 0.0 1450.0
MMS3_k127_486415_1 Domain of unknown function (DUF4105) - - - 2.335e-216 689.0
MMS3_k127_486415_2 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 464.0
MMS3_k127_486415_3 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 431.0
MMS3_k127_486415_4 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 360.0
MMS3_k127_486415_5 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000000000004015 188.0
MMS3_k127_486415_6 - - - - 0.000000000000000000000005895 104.0
MMS3_k127_48695_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 559.0
MMS3_k127_48695_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 452.0
MMS3_k127_48695_2 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 321.0
MMS3_k127_48695_3 surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 308.0
MMS3_k127_48695_4 PFAM ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002033 282.0
MMS3_k127_48695_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000004422 256.0
MMS3_k127_48695_6 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.0000000004583 68.0
MMS3_k127_511963_0 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 511.0
MMS3_k127_511963_1 SigmaW regulon antibacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 492.0
MMS3_k127_511963_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 381.0
MMS3_k127_511963_3 PFAM Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000001317 262.0
MMS3_k127_511963_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000009545 264.0
MMS3_k127_511963_5 Belongs to the P(II) protein family - - - 0.000000000000000000000000000000000002963 140.0
MMS3_k127_511963_6 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000000000000000003053 144.0
MMS3_k127_511963_7 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.0000000000000000000000000000001423 129.0
MMS3_k127_511963_8 Acetoacetate decarboxylase (ADC) - - - 0.0000000000000000000005144 106.0
MMS3_k127_511963_9 Ammonium Transporter Family K03320 - - 0.0000000008418 59.0
MMS3_k127_512307_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 342.0
MMS3_k127_512307_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000007252 142.0
MMS3_k127_512594_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 3.967e-210 665.0
MMS3_k127_512594_1 permease YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 379.0
MMS3_k127_512594_2 permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 307.0
MMS3_k127_512594_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000002791 272.0
MMS3_k127_512594_4 Phospholipid methyltransferase - - - 0.0000000001567 65.0
MMS3_k127_520645_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 7.467e-265 823.0
MMS3_k127_520645_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 491.0
MMS3_k127_520645_2 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000007175 182.0
MMS3_k127_520645_3 - - - - 0.000000000000000002628 90.0
MMS3_k127_520645_4 Sigma-54 interaction domain - - - 0.000000000001544 71.0
MMS3_k127_543151_0 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 530.0
MMS3_k127_543151_1 type IV pilus assembly PilZ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 373.0
MMS3_k127_543151_2 PFAM ThiJ PfpI domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 295.0
MMS3_k127_543151_3 - - - - 0.00000000000000000005268 93.0
MMS3_k127_543151_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.000002045 57.0
MMS3_k127_561034_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01920 - 6.3.2.3 2.665e-196 623.0
MMS3_k127_561034_1 Glutamate-cysteine ligase family 2(GCS2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 458.0
MMS3_k127_561034_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 301.0
MMS3_k127_561034_3 PFAM N-formylglutamate amidohydrolase - - - 0.000000000000001012 79.0
MMS3_k127_589292_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.04e-206 649.0
MMS3_k127_589292_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 6.433e-196 617.0
MMS3_k127_589292_10 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000006708 244.0
MMS3_k127_589292_11 Essential cell division protein K03589 - - 0.0000000000000000000000000000000000000000000001016 179.0
MMS3_k127_589292_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 483.0
MMS3_k127_589292_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 444.0
MMS3_k127_589292_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 431.0
MMS3_k127_589292_5 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 394.0
MMS3_k127_589292_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 359.0
MMS3_k127_589292_7 4Fe-4S dicluster domain K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 315.0
MMS3_k127_589292_8 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 297.0
MMS3_k127_589292_9 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000105 269.0
MMS3_k127_611797_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000002514 260.0
MMS3_k127_611797_1 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000000000000000000001107 176.0
MMS3_k127_637291_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 7.069e-273 846.0
MMS3_k127_640237_0 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 334.0
MMS3_k127_640237_1 Glycosyltransferase, group 2 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 290.0
MMS3_k127_640237_2 PFAM glycosyl transferase family 9 K02843 - - 0.0000000000000000000000000000000000000000000000000000000000008981 223.0
MMS3_k127_640237_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000006226 120.0
MMS3_k127_640237_4 Asparagine synthase K01953 - 6.3.5.4 0.000005492 49.0
MMS3_k127_650592_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 2.888e-209 704.0
MMS3_k127_650592_1 pilus assembly protein PilW - - - 0.0000000000000000000004301 106.0
MMS3_k127_650592_3 Type II transport protein GspH K08084 - - 0.00000001873 62.0
MMS3_k127_650592_4 Prokaryotic N-terminal methylation motif K02671 - - 0.0000002241 59.0
MMS3_k127_650592_5 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.00005061 52.0
MMS3_k127_679360_0 Plasma-membrane proton-efflux K01535 - 3.6.3.6 0.0 1030.0
MMS3_k127_69189_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 391.0
MMS3_k127_69189_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 370.0
MMS3_k127_69189_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000002594 233.0
MMS3_k127_69189_4 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000008018 112.0
MMS3_k127_696573_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 - 6.2.1.1,6.2.1.17 5.502e-223 693.0
MMS3_k127_696573_1 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 494.0
MMS3_k127_696573_2 NUBPL iron-transfer P-loop NTPase K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 415.0
MMS3_k127_696573_3 O-Antigen Polymerase K02847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 358.0
MMS3_k127_696573_4 domain protein K14194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 381.0
MMS3_k127_696880_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K05587,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 538.0
MMS3_k127_696880_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 442.0
MMS3_k127_696880_10 Cytochrome C assembly protein - - - 0.000000000000001118 76.0
MMS3_k127_696880_2 Iron only hydrogenase large subunit, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 332.0
MMS3_k127_696880_3 PHP-associated K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000001852 229.0
MMS3_k127_696880_4 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000009735 211.0
MMS3_k127_696880_5 Histidine kinase-like ATPase domain K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000147 169.0
MMS3_k127_696880_6 PhoQ Sensor - - - 0.0000000000000000000000000000000000002261 143.0
MMS3_k127_696880_7 Iron only hydrogenase large subunit, C-terminal domain - - - 0.000000000000000000000000000004649 122.0
MMS3_k127_696880_8 4Fe-4S dicluster domain - - - 0.00000000000000000000000000006589 127.0
MMS3_k127_696880_9 DRTGG domain - - - 0.00000000000000000000000005449 112.0
MMS3_k127_699383_0 Heat shock 70 kDa protein K04043 - - 0.0 1007.0
MMS3_k127_699383_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000005073 175.0
MMS3_k127_722394_0 Histone deacetylase - - - 4.719e-231 729.0
MMS3_k127_722394_1 SMART Elongator protein 3 MiaB NifB - - - 2.578e-224 711.0
MMS3_k127_722394_10 acetoacetate decarboxylase K01574 - 4.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 288.0
MMS3_k127_722394_11 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003766 259.0
MMS3_k127_722394_12 His Kinase A (phosphoacceptor) domain - - - 0.00000000009707 66.0
MMS3_k127_722394_13 Histidine kinase K07677 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0033554,GO:0035556,GO:0036211,GO:0042710,GO:0043170,GO:0043412,GO:0044010,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051716,GO:0065007,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0104004,GO:0140096,GO:1901564 2.7.13.3 0.00005974 51.0
MMS3_k127_722394_14 biotin synthase activity K00833,K01012 - 2.6.1.62,2.8.1.6 0.0003354 48.0
MMS3_k127_722394_2 FAD dependent oxidoreductase K00111 - 1.1.5.3 1.299e-201 640.0
MMS3_k127_722394_3 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 594.0
MMS3_k127_722394_4 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 551.0
MMS3_k127_722394_5 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 508.0
MMS3_k127_722394_6 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 437.0
MMS3_k127_722394_7 Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 401.0
MMS3_k127_722394_8 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 382.0
MMS3_k127_722394_9 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 308.0
MMS3_k127_727064_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 1.96e-260 812.0
MMS3_k127_727064_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 1.642e-209 657.0
MMS3_k127_727064_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 308.0
MMS3_k127_727064_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000000003148 197.0
MMS3_k127_727064_4 ATP synthase subunit K K02124 - - 0.000000000000000000000000000000000000000006655 158.0
MMS3_k127_727064_5 4Fe-4S dicluster domain - - - 0.000000000000000000000000000009373 122.0
MMS3_k127_727064_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000000000000000000000001386 114.0
MMS3_k127_727064_7 Protein of unknown function (DUF2764) - - - 0.0000000000000000001413 95.0
MMS3_k127_756241_0 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 359.0
MMS3_k127_756241_1 Squalene phytoene synthase K00801 - 2.5.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 355.0
MMS3_k127_756241_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 355.0
MMS3_k127_787940_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.143e-201 640.0
MMS3_k127_787940_1 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 581.0
MMS3_k127_787940_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 430.0
MMS3_k127_787940_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 425.0
MMS3_k127_787940_4 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 350.0
MMS3_k127_787940_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001329 258.0
MMS3_k127_787940_6 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000981 89.0
MMS3_k127_813330_0 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 2.383e-194 619.0
MMS3_k127_813330_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000491 231.0
MMS3_k127_813330_2 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000004702 209.0
MMS3_k127_813330_3 cheY-homologous receiver domain K07773 - - 0.00000000000000000000000000000000000000000000000000000000001356 208.0
MMS3_k127_813330_4 aspartate kinase activity - - - 0.00000000000000000000000000000000000000000289 168.0
MMS3_k127_813430_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 7.043e-264 821.0
MMS3_k127_813430_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 601.0
MMS3_k127_813430_2 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003893 255.0
MMS3_k127_825145_0 PFAM aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 515.0
MMS3_k127_825145_1 PFAM Glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008672 477.0
MMS3_k127_825145_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 381.0
MMS3_k127_825145_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 374.0
MMS3_k127_825145_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 344.0
MMS3_k127_825145_5 Domain of unknown function (DUF1848) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 332.0
MMS3_k127_825145_6 PFAM transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000757 287.0
MMS3_k127_825145_7 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002126 271.0
MMS3_k127_825145_8 - - - - 0.00000000000000000000000000007311 119.0
MMS3_k127_82667_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 4.348e-268 835.0
MMS3_k127_82667_1 PFAM inositol monophosphatase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 305.0
MMS3_k127_838090_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 3.034e-265 832.0
MMS3_k127_838090_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 1.247e-199 631.0
MMS3_k127_838090_10 4Fe-4S binding domain - - - 0.000000003482 59.0
MMS3_k127_838090_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 614.0
MMS3_k127_838090_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009674 515.0
MMS3_k127_838090_4 PFAM ATPase BadF BadG BcrA BcrD type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 359.0
MMS3_k127_838090_5 PFAM ATPase BadF BadG BcrA BcrD type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 337.0
MMS3_k127_838090_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 303.0
MMS3_k127_838090_7 Anion-transporting ATPase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008411 272.0
MMS3_k127_838090_8 choline dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008184 253.0
MMS3_k127_838090_9 CO dehydrogenase/acetyl-CoA synthase complex beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009727 251.0
MMS3_k127_860773_0 acyl-CoA dehydrogenase - - - 1.779e-242 756.0
MMS3_k127_860773_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 518.0
MMS3_k127_860773_2 Nitrite and sulphite reductase 4Fe-4S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 511.0
MMS3_k127_860773_3 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 387.0
MMS3_k127_860773_4 PFAM regulatory protein MerR - - - 0.00000000000000000000000000000000000000000000000000000000000000006818 229.0
MMS3_k127_868174_0 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 586.0
MMS3_k127_868174_1 Glycosyl transferase, family 2 K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 493.0
MMS3_k127_868174_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 361.0
MMS3_k127_868174_3 peptidase dimerisation domain protein - - - 0.000000000000000000000000000001702 133.0
MMS3_k127_868174_4 Outer membrane efflux protein - - - 0.0000000000000001154 93.0
MMS3_k127_874891_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.291e-252 790.0
MMS3_k127_874891_1 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000002502 233.0
MMS3_k127_874891_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000002195 157.0
MMS3_k127_878627_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 1.163e-206 654.0
MMS3_k127_878627_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 420.0
MMS3_k127_878627_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 377.0
MMS3_k127_878627_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000001914 224.0
MMS3_k127_878627_4 regulatory protein, FmdB family - - - 0.000000000000000000000002974 104.0
MMS3_k127_878627_5 outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000005611 86.0
MMS3_k127_878627_6 peptidase - - - 0.0003166 44.0
MMS3_k127_884517_0 Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 577.0
MMS3_k127_884517_1 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 350.0
MMS3_k127_884517_2 Flavodoxin domain K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000008685 256.0
MMS3_k127_884517_3 Protein of unknown function (DUF1614) - - - 0.000000000000000000000000000000000000000000000000001588 190.0
MMS3_k127_884517_4 Enzyme of the cupin superfamily K06995 - - 0.00000000000000002437 82.0
MMS3_k127_884517_6 Protein of unknown function (DUF861) K06995 - - 0.0002123 47.0
MMS3_k127_888216_0 ATPase BadF BadG BcrA BcrD type - - - 0.0 1182.0
MMS3_k127_888216_1 NYN domain - - - 0.0000000000000000000000000000000000004446 143.0
MMS3_k127_888518_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 402.0
MMS3_k127_888518_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0000000000000000000000000000000000000000000000000003213 188.0
MMS3_k127_888518_2 SPTR PilT protein domain protein - - - 0.0000000000000000000000001696 107.0
MMS3_k127_888518_3 Virulence-associated protein K18829 - - 0.0000001251 53.0
MMS3_k127_889197_0 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 321.0
MMS3_k127_889197_1 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000001487 189.0
MMS3_k127_889197_2 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000006207 166.0
MMS3_k127_896178_0 RND efflux system, outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000007106 208.0
MMS3_k127_896178_1 PFAM Carbohydrate-selective porin OprB K07267 - - 0.0000000000000000000000000000000000000000000000000000000002155 221.0
MMS3_k127_896178_2 Glycine zipper - - - 0.0000000000000000000000000000000000000000000000000001561 193.0
MMS3_k127_896178_3 MreB/Mbl protein - - - 0.000000000000000000000001035 104.0
MMS3_k127_896178_4 AAA domain - - - 0.0001288 50.0
MMS3_k127_896178_5 Peptidase propeptide and YPEB domain - - - 0.0006717 49.0
MMS3_k127_901166_0 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 574.0
MMS3_k127_901166_1 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 556.0
MMS3_k127_901166_2 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 352.0
MMS3_k127_901166_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000001877 117.0
MMS3_k127_901166_4 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase K15022 - 1.17.1.10 0.0008002 42.0
MMS3_k127_90173_0 PFAM thiamine pyrophosphate protein domain protein TPP-binding K01652 - 2.2.1.6 6.865e-293 905.0
MMS3_k127_90173_1 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 561.0
MMS3_k127_90173_2 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 524.0
MMS3_k127_90173_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000001171 156.0
MMS3_k127_90173_4 - - - - 0.000000000000000000000000000000000000006295 149.0
MMS3_k127_90173_5 PFAM regulatory protein TetR - - - 0.00000007661 55.0
MMS3_k127_927358_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 408.0
MMS3_k127_927358_1 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003874 280.0
MMS3_k127_927358_2 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000000001031 212.0
MMS3_k127_927358_3 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000004478 132.0
MMS3_k127_927358_4 Domain of unknown function (DUF4911) - - - 0.00000000000000001797 85.0
MMS3_k127_9285_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.5e-322 1012.0
MMS3_k127_9285_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 5.516e-279 870.0
MMS3_k127_9285_2 PFAM penicillin-binding protein transpeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 354.0
MMS3_k127_9285_3 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 305.0
MMS3_k127_9285_4 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001353 265.0
MMS3_k127_9285_5 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000003368 171.0
MMS3_k127_9285_6 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.000000004052 59.0
MMS3_k127_941249_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 381.0
MMS3_k127_941249_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008108 271.0
MMS3_k127_941249_2 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000001836 198.0
MMS3_k127_941249_3 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000002594 179.0
MMS3_k127_951071_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 429.0
MMS3_k127_951071_1 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 325.0
MMS3_k127_951071_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001868 236.0
MMS3_k127_967991_0 Acetyl-CoA hydrolase transferase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 591.0
MMS3_k127_967991_1 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 359.0
MMS3_k127_967991_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 352.0
MMS3_k127_978916_0 Belongs to the methyltransferase superfamily K06969,K12297 - 2.1.1.173,2.1.1.191,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 344.0
MMS3_k127_978916_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 327.0
MMS3_k127_978916_2 geranylgeranyl reductase activity - GO:0000166,GO:0003674,GO:0005488,GO:0008150,GO:0008152,GO:0009404,GO:0009987,GO:0019748,GO:0030153,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0048037,GO:0050660,GO:0050662,GO:0097159,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000008633 198.0
MMS3_k127_978916_3 HD domain K07814 - - 0.000000000000000007994 94.0
MMS3_k127_990424_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000002739 185.0
MMS3_k127_990424_1 Belongs to the UPF0296 family K09777 - - 0.00000000000000005374 87.0
MMS3_k127_990764_0 CBS domain K00974 - 2.7.7.72 5e-324 1015.0
MMS3_k127_990764_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005375 248.0
MMS3_k127_990764_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000002417 220.0
MMS3_k127_990764_3 Peptidase M50 - - - 0.000000000000000000000000000000000000000000001102 173.0
MMS3_k127_993282_0 DNA methylAse - - - 7.711e-285 895.0
MMS3_k127_993282_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 403.0
MMS3_k127_99375_0 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 480.0
MMS3_k127_99375_1 acetyl-CoA catabolic process K00197,K00226,K08941,K17723 - 1.3.1.1,1.3.98.1,2.1.1.245 0.00000000000000000000000000000000000000000001017 166.0
MMS3_k127_99375_2 Methyltransferase type 11 K01990,K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000441 135.0
MMS3_k127_999037_0 PFAM sigma-54 factor interaction domain-containing protein - - - 1.153e-199 631.0
MMS3_k127_999037_1 Bacterial regulatory protein, Fis family - - - 1.22e-199 632.0
MMS3_k127_999037_10 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000000000001863 87.0
MMS3_k127_999037_11 Family of unknown function (DUF5320) - - - 0.0000000000000003234 83.0
MMS3_k127_999037_2 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 511.0
MMS3_k127_999037_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 321.0
MMS3_k127_999037_4 PFAM formylmethanofuran dehydrogenase subunit E region K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 286.0
MMS3_k127_999037_5 PFAM regulatory protein TetR K16137 - - 0.00000000000000000000000000000000000000000000007362 176.0
MMS3_k127_999037_6 PFAM ATP synthase I chain - - - 0.00000000000000000000000000000001076 131.0
MMS3_k127_999037_7 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000002942 126.0
MMS3_k127_999037_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000001049 121.0
MMS3_k127_999037_9 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000557 119.0