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Overview

ID MAG02800
Name MMS3_bin.37
Sample SMP0066
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Ferrovibrionales
Family Ferrovibrionaceae
Genus JAJYTL01
Species
Assembly information
Completeness (%) 82.96
Contamination (%) 3.02
GC content (%) 63.0
N50 (bp) 9,608
Genome size (bp) 1,748,941

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1734

Gene name Description KEGG GOs EC E-value Score Sequence
MMS3_k127_1013112_0 Lon protease (S16) C-terminal proteolytic domain K01338 - 3.4.21.53 0.0 1062.0
MMS3_k127_1013112_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.593e-310 960.0
MMS3_k127_1013112_2 Radical SAM - - - 8.585e-252 785.0
MMS3_k127_1013112_3 Aminotransferase class-V K00281,K00283 - 1.4.4.2 3.675e-244 763.0
MMS3_k127_1013112_4 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 602.0
MMS3_k127_1013112_5 Glycine cleavage system T protein K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 403.0
MMS3_k127_1013112_6 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 325.0
MMS3_k127_1013112_7 YdjC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 302.0
MMS3_k127_1013112_8 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000004653 177.0
MMS3_k127_1085209_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.132e-220 702.0
MMS3_k127_1085209_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 522.0
MMS3_k127_1085209_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 493.0
MMS3_k127_1085209_3 Cell wall formation K00075,K01921 - 1.3.1.98,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 374.0
MMS3_k127_1085209_4 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 363.0
MMS3_k127_1085209_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 325.0
MMS3_k127_1085209_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 320.0
MMS3_k127_1085209_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000373 284.0
MMS3_k127_1085209_8 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000001189 188.0
MMS3_k127_1088604_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 3.27e-236 739.0
MMS3_k127_1088604_1 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 3.308e-219 699.0
MMS3_k127_1088604_10 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000113 284.0
MMS3_k127_1088604_11 enoyl-CoA hydratase K13766,K13779 - 4.2.1.18,4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005732 274.0
MMS3_k127_1088604_12 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000005702 256.0
MMS3_k127_1088604_13 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009947 251.0
MMS3_k127_1088604_14 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006991 242.0
MMS3_k127_1088604_15 acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000001155 232.0
MMS3_k127_1088604_16 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000005916 184.0
MMS3_k127_1088604_17 Protein of unknown function (DUF1489) - - - 0.0000000000000000000000000000000000001513 151.0
MMS3_k127_1088604_18 Phosphohistidine phosphatase SixA K08296 - - 0.0000000000000000000000000000000000004934 149.0
MMS3_k127_1088604_19 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.000000000000000000004952 94.0
MMS3_k127_1088604_2 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 9.075e-210 656.0
MMS3_k127_1088604_20 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000032 87.0
MMS3_k127_1088604_3 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 486.0
MMS3_k127_1088604_4 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 442.0
MMS3_k127_1088604_5 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 449.0
MMS3_k127_1088604_6 carboxylase K01969 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 439.0
MMS3_k127_1088604_7 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006423 404.0
MMS3_k127_1088604_8 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 347.0
MMS3_k127_1088604_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254 333.0
MMS3_k127_1092448_0 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 528.0
MMS3_k127_1092448_1 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001993 250.0
MMS3_k127_1092448_2 transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000007445 207.0
MMS3_k127_1092448_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000001427 150.0
MMS3_k127_1092448_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000003298 73.0
MMS3_k127_1095359_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 492.0
MMS3_k127_1095359_1 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000001542 177.0
MMS3_k127_1100332_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 2.211e-232 747.0
MMS3_k127_1100332_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 467.0
MMS3_k127_1100332_2 Enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 384.0
MMS3_k127_1100332_3 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 303.0
MMS3_k127_1100332_4 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000000000000000000699 140.0
MMS3_k127_1100332_5 transcriptional - - - 0.0000000000000000000000000000006137 130.0
MMS3_k127_1100332_6 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000000284 114.0
MMS3_k127_1100332_7 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000008041 72.0
MMS3_k127_1100332_8 CoA-transferase family III K07749 - 2.8.3.16 0.0000007245 51.0
MMS3_k127_1104539_0 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 364.0
MMS3_k127_1104539_1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000004925 267.0
MMS3_k127_1104539_2 double-strand break repair protein AddB - - - 0.00000000000000000000000001139 113.0
MMS3_k127_1111103_0 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 306.0
MMS3_k127_1111103_1 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001974 275.0
MMS3_k127_1111103_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001375 254.0
MMS3_k127_1111103_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000004519 183.0
MMS3_k127_1111103_4 domain, Protein - - - 0.0000000000000000000000000000000000000000000000007399 175.0
MMS3_k127_1111103_5 PAS domain - - - 0.000000000000000000000000000000000000000000000001723 178.0
MMS3_k127_1111103_6 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000005338 139.0
MMS3_k127_1111410_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1614.0
MMS3_k127_1111410_1 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 496.0
MMS3_k127_1111410_2 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001278 285.0
MMS3_k127_1111410_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000126 217.0
MMS3_k127_1112168_0 Catalase K03781 - 1.11.1.6 1.15e-262 814.0
MMS3_k127_1112168_1 ABC transporter K01995,K01996 - - 5.544e-203 646.0
MMS3_k127_1112168_10 - - - - 0.0000004958 55.0
MMS3_k127_1112168_2 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 607.0
MMS3_k127_1112168_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 508.0
MMS3_k127_1112168_4 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 448.0
MMS3_k127_1112168_5 PFAM inner-membrane translocator K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 391.0
MMS3_k127_1112168_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 368.0
MMS3_k127_1112168_7 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 295.0
MMS3_k127_1112168_8 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000001044 196.0
MMS3_k127_1112168_9 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000003917 166.0
MMS3_k127_111322_0 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 373.0
MMS3_k127_111322_1 PrpF protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 371.0
MMS3_k127_111322_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000001942 92.0
MMS3_k127_1147131_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - 0.0 1236.0
MMS3_k127_1147131_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 492.0
MMS3_k127_1147131_10 - - - - 0.00000000000000000000000000000000000003898 161.0
MMS3_k127_1147131_11 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000001238 141.0
MMS3_k127_1147131_2 Epoxide hydrolase N terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 444.0
MMS3_k127_1147131_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 413.0
MMS3_k127_1147131_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 379.0
MMS3_k127_1147131_5 Epoxide hydrolase N terminus K01253 - 3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 356.0
MMS3_k127_1147131_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 342.0
MMS3_k127_1147131_7 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 323.0
MMS3_k127_1147131_8 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000002101 238.0
MMS3_k127_1147131_9 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000001011 214.0
MMS3_k127_1157922_0 Acetyl-CoA dehydrogenase C-terminal like K00248,K00249 - 1.3.8.1,1.3.8.7 1.562e-242 761.0
MMS3_k127_1157922_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 535.0
MMS3_k127_1157922_2 Carbamoyl-phosphate synthase L chain, ATP-binding K13777 - 6.4.1.5 0.00000000000001914 76.0
MMS3_k127_1158993_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 2.172e-293 920.0
MMS3_k127_1158993_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 581.0
MMS3_k127_1158993_10 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000002529 214.0
MMS3_k127_1158993_11 ROS/MUCR transcriptional regulator protein - - - 0.000000000000000000000000000000000000000000000000000009991 192.0
MMS3_k127_1158993_12 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000003018 161.0
MMS3_k127_1158993_13 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.000000000000000000000000000000000001948 146.0
MMS3_k127_1158993_14 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000001484 115.0
MMS3_k127_1158993_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009368 524.0
MMS3_k127_1158993_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 504.0
MMS3_k127_1158993_4 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 429.0
MMS3_k127_1158993_5 SMART metal-dependent phosphohydrolase, HD K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 413.0
MMS3_k127_1158993_6 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 282.0
MMS3_k127_1158993_7 NADH dehydrogenase nad(P)h nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002959 274.0
MMS3_k127_1158993_8 COG0694 Thioredoxin-like proteins and domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002137 271.0
MMS3_k127_1158993_9 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000004215 250.0
MMS3_k127_1159919_0 AMP-binding enzyme C-terminal domain K01895,K08295 - 6.2.1.1,6.2.1.32 2.892e-220 696.0
MMS3_k127_1159919_1 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000897 452.0
MMS3_k127_1159919_2 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 342.0
MMS3_k127_1159919_3 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 306.0
MMS3_k127_1159919_4 Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009261 281.0
MMS3_k127_1159919_5 alpha beta K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003141 244.0
MMS3_k127_1159919_6 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000001081 187.0
MMS3_k127_1159919_7 MarR family transcriptional regulator - - - 0.000000000000000000000000000000001079 132.0
MMS3_k127_1159919_8 NAD(P)H quinone oxidoreductase K00344 - 1.6.5.5 0.0006591 45.0
MMS3_k127_1178830_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008412 508.0
MMS3_k127_1178830_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 491.0
MMS3_k127_1178830_10 Putative bacterial sensory transduction regulator - - - 0.00000000000000000000000000000006436 130.0
MMS3_k127_1178830_11 Membrane fusogenic activity K09806 - - 0.0000000000000000001117 92.0
MMS3_k127_1178830_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 362.0
MMS3_k127_1178830_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 323.0
MMS3_k127_1178830_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003401 270.0
MMS3_k127_1178830_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002206 265.0
MMS3_k127_1178830_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000005001 244.0
MMS3_k127_1178830_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
MMS3_k127_1178830_8 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000003858 190.0
MMS3_k127_1178830_9 PFAM MaoC domain protein dehydratase - - - 0.000000000000000000000000000000000000000000000001176 177.0
MMS3_k127_1198328_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 430.0
MMS3_k127_1198328_1 COG1253 Hemolysins and related proteins containing CBS domains K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 310.0
MMS3_k127_1198328_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000236 52.0
MMS3_k127_1199719_0 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 2.819e-238 742.0
MMS3_k127_1199719_1 single-stranded-DNA-specific exonuclease recJ K07462 - - 6.782e-206 657.0
MMS3_k127_1199719_10 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001633 258.0
MMS3_k127_1199719_11 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000002715 230.0
MMS3_k127_1199719_12 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000002344 199.0
MMS3_k127_1199719_13 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03646,K03832 - - 0.000000000000000000000000000000000000000000000006699 185.0
MMS3_k127_1199719_14 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000001173 176.0
MMS3_k127_1199719_15 Belongs to the Fur family K09826 - - 0.00000000000000000000000000000000000000000002856 165.0
MMS3_k127_1199719_16 protein conserved in bacteria K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000009382 163.0
MMS3_k127_1199719_17 - - - - 0.000000000000000000000000003386 117.0
MMS3_k127_1199719_18 in Escherichia coli this protein forms a dimer and binds manganese K11532 - 3.1.3.11,3.1.3.37 0.0000000002233 61.0
MMS3_k127_1199719_2 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 618.0
MMS3_k127_1199719_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 540.0
MMS3_k127_1199719_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038,K21977 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 527.0
MMS3_k127_1199719_5 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 520.0
MMS3_k127_1199719_6 Cysteine synthase K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 481.0
MMS3_k127_1199719_7 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 371.0
MMS3_k127_1199719_8 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 360.0
MMS3_k127_1199719_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 308.0
MMS3_k127_1209373_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 494.0
MMS3_k127_1209373_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 344.0
MMS3_k127_1209373_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 0.00000000003477 64.0
MMS3_k127_1219147_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 575.0
MMS3_k127_1219147_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 439.0
MMS3_k127_1219147_2 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 416.0
MMS3_k127_1219147_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 415.0
MMS3_k127_1219147_4 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009786 261.0
MMS3_k127_1219147_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000009447 248.0
MMS3_k127_1219147_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000001479 223.0
MMS3_k127_1219147_7 Uncharacterized protein conserved in bacteria (DUF2066) - - - 0.0000000000000000000000000000000000000000000000000000000002694 218.0
MMS3_k127_1219147_8 AI-2E family transporter - - - 0.000000000000007002 79.0
MMS3_k127_1221216_0 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 409.0
MMS3_k127_1221216_1 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000000004623 108.0
MMS3_k127_1248355_0 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 2.696e-263 842.0
MMS3_k127_1248355_1 AMP-binding enzyme K12508 - 6.2.1.34 1.389e-237 750.0
MMS3_k127_1248355_2 ABC transporter K02471 - - 7.895e-201 640.0
MMS3_k127_1248355_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 607.0
MMS3_k127_1248355_4 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 452.0
MMS3_k127_1248355_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 419.0
MMS3_k127_1248355_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 351.0
MMS3_k127_1248355_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 340.0
MMS3_k127_1248355_8 Dehydroquinase class II - - - 0.000000000000000000000000000003194 123.0
MMS3_k127_1248355_9 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000005012 106.0
MMS3_k127_1252037_0 CTP synthase N-terminus K01937 - 6.3.4.2 9.814e-275 853.0
MMS3_k127_1252037_1 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 383.0
MMS3_k127_1252037_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001985 278.0
MMS3_k127_1252037_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001317 279.0
MMS3_k127_1252037_4 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000002182 98.0
MMS3_k127_1252037_5 Preprotein translocase subunit SecG K03075 - - 0.0000000000000003489 85.0
MMS3_k127_1252109_0 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 558.0
MMS3_k127_1252109_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 518.0
MMS3_k127_1252109_10 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000002657 244.0
MMS3_k127_1252109_11 Uncharacterized protein conserved in bacteria (DUF2093) - - - 0.00000000000000003088 83.0
MMS3_k127_1252109_2 Acyl-CoA dehydrogenase, N-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 490.0
MMS3_k127_1252109_3 PFAM CoA-transferase family III K07544,K07749,K18702 - 2.8.3.15,2.8.3.16,2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 476.0
MMS3_k127_1252109_4 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 451.0
MMS3_k127_1252109_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 321.0
MMS3_k127_1252109_6 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 311.0
MMS3_k127_1252109_7 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 299.0
MMS3_k127_1252109_8 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 294.0
MMS3_k127_1252109_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000008277 258.0
MMS3_k127_1256932_0 COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - - - 5.425e-212 672.0
MMS3_k127_1256932_1 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 533.0
MMS3_k127_1256932_2 Bacterial periplasmic substrate-binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 398.0
MMS3_k127_1256932_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 390.0
MMS3_k127_1256932_4 of ABC transporters with duplicated ATPase K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 331.0
MMS3_k127_1256932_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000168 280.0
MMS3_k127_127415_0 ABC transporter transmembrane region K02021 - - 5.637e-264 839.0
MMS3_k127_127415_1 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 501.0
MMS3_k127_127415_2 S-adenosyl-L-methionine methyltransferase - - - 0.00000000000000000000000000000000000000000000000000001379 197.0
MMS3_k127_127415_3 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000005278 187.0
MMS3_k127_127415_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000008436 77.0
MMS3_k127_1294936_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 472.0
MMS3_k127_1294936_1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 360.0
MMS3_k127_1294936_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004491 280.0
MMS3_k127_1294936_3 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000725 260.0
MMS3_k127_1294936_4 COG2885 outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.0000000002076 72.0
MMS3_k127_1301616_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 538.0
MMS3_k127_1301616_1 COG0768 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 544.0
MMS3_k127_1301616_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 514.0
MMS3_k127_1301616_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 448.0
MMS3_k127_1301616_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 363.0
MMS3_k127_1301616_5 HpcH/HpaI aldolase/citrate lyase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003272 268.0
MMS3_k127_1301616_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000006468 207.0
MMS3_k127_1301616_7 Cupin domain - - - 0.0000000000000000000000002311 110.0
MMS3_k127_1301616_8 transcription regulator activity K03925 - - 0.000000000000000000000001264 109.0
MMS3_k127_1301616_9 periplasmic protein - - - 0.000002298 56.0
MMS3_k127_1303611_0 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 546.0
MMS3_k127_1303611_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 407.0
MMS3_k127_1303611_2 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 347.0
MMS3_k127_1303611_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 340.0
MMS3_k127_1303611_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 318.0
MMS3_k127_1303611_5 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 287.0
MMS3_k127_1303611_6 SpoU rRNA Methylase family - - - 0.0000000000000000000000000000000000000000000000000000000000001338 217.0
MMS3_k127_1303611_7 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000000009271 198.0
MMS3_k127_1303611_8 Molecular chaperone. Has ATPase activity K04079 - - 0.000000000000000000000000000000000000000173 153.0
MMS3_k127_1303611_9 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000001347 143.0
MMS3_k127_1304456_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 554.0
MMS3_k127_1304456_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 505.0
MMS3_k127_1304456_2 SNARE associated Golgi protein - - - 0.000000000000000000000003642 115.0
MMS3_k127_1304456_3 Signal transduction histidine kinase - - - 0.000000000006638 69.0
MMS3_k127_1308537_0 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 460.0
MMS3_k127_1308537_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 375.0
MMS3_k127_1308537_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 336.0
MMS3_k127_1308537_3 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 296.0
MMS3_k127_1308537_4 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009797 279.0
MMS3_k127_1308537_5 Mycolic acid cyclopropane synthetase - - - 0.0000000000001781 82.0
MMS3_k127_1308537_6 major facilitator superfamily - - - 0.000000000001428 70.0
MMS3_k127_1311741_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 460.0
MMS3_k127_1311741_1 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 344.0
MMS3_k127_1315177_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.615e-272 853.0
MMS3_k127_1315177_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 566.0
MMS3_k127_1315177_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009789 452.0
MMS3_k127_1343922_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 379.0
MMS3_k127_1343922_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 359.0
MMS3_k127_1343922_2 protein conserved in bacteria K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001033 260.0
MMS3_k127_1343922_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000001174 220.0
MMS3_k127_1343922_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000007959 162.0
MMS3_k127_1344843_0 Methionine synthase K00548 - 2.1.1.13 0.0 1633.0
MMS3_k127_1344843_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 2.031e-196 629.0
MMS3_k127_1344843_10 PFAM IS1 transposase - - - 0.0003504 43.0
MMS3_k127_1344843_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 426.0
MMS3_k127_1344843_3 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 387.0
MMS3_k127_1344843_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 353.0
MMS3_k127_1344843_5 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000001179 181.0
MMS3_k127_1344843_6 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.0000000000000000000000000000000000000006566 157.0
MMS3_k127_1344843_7 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000001994 105.0
MMS3_k127_1344843_8 - - - - 0.000000000000001121 84.0
MMS3_k127_1344843_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0003674,GO:0005215 - 0.00000000005278 66.0
MMS3_k127_1370813_0 Phosphate K00625,K00634 - 2.3.1.19,2.3.1.8 2.851e-235 735.0
MMS3_k127_1370813_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 462.0
MMS3_k127_1370813_2 PFAM alpha beta hydrolase fold K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 335.0
MMS3_k127_1373359_0 Belongs to the IlvD Edd family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 512.0
MMS3_k127_1373359_1 TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 480.0
MMS3_k127_1373359_2 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000006516 210.0
MMS3_k127_1398673_0 AMP-binding enzyme C-terminal domain - - - 6.318e-219 695.0
MMS3_k127_1398673_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 541.0
MMS3_k127_1398673_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 332.0
MMS3_k127_1398673_3 Ami_2 K00788,K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 2.5.1.3,3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000628 260.0
MMS3_k127_1398673_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000001096 117.0
MMS3_k127_1398673_5 - - - - 0.000000000000000000000000004887 113.0
MMS3_k127_1398673_7 ankyrin repeat K15503 - - 0.000000000000000003064 92.0
MMS3_k127_141840_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1664.0
MMS3_k127_1487740_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 4.635e-317 978.0
MMS3_k127_1487740_1 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 329.0
MMS3_k127_1487740_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000008231 152.0
MMS3_k127_15448_0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 6.231e-238 750.0
MMS3_k127_15448_1 Aminotransferase K14261 - - 1.446e-196 620.0
MMS3_k127_15448_10 CDGSH-type zinc finger. Function unknown. - - - 0.000000000000000000000000000000005319 131.0
MMS3_k127_15448_11 Glycine cleavage system T protein K00605 - 2.1.2.10 0.0000000000000000000000000000003045 123.0
MMS3_k127_15448_12 - - - - 0.00000000000000000000744 100.0
MMS3_k127_15448_13 OmpA family - - - 0.00000002241 66.0
MMS3_k127_15448_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 550.0
MMS3_k127_15448_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 502.0
MMS3_k127_15448_4 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 459.0
MMS3_k127_15448_5 COG1494 Fructose-1,6-bisphosphatase sedoheptulose 1,7-bisphosphatase and related proteins K11532 - 3.1.3.11,3.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 452.0
MMS3_k127_15448_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 420.0
MMS3_k127_15448_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000009888 236.0
MMS3_k127_15448_8 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000001502 227.0
MMS3_k127_15448_9 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003333 225.0
MMS3_k127_1606960_0 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 517.0
MMS3_k127_1606960_1 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000004857 136.0
MMS3_k127_1606960_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000004591 93.0
MMS3_k127_1606960_3 Opacity family porin protein - - - 0.000000000002673 76.0
MMS3_k127_1606960_4 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000531 63.0
MMS3_k127_1636677_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.458e-202 661.0
MMS3_k127_1636677_1 Aminotransferase - - - 0.00000000000000000000000000000000000000002679 154.0
MMS3_k127_1647562_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 339.0
MMS3_k127_1647562_1 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 312.0
MMS3_k127_1647562_2 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000001757 145.0
MMS3_k127_1647562_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000007407 57.0
MMS3_k127_1649250_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 7.64e-278 863.0
MMS3_k127_1649250_1 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 465.0
MMS3_k127_1649250_10 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00002552 51.0
MMS3_k127_1649250_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 427.0
MMS3_k127_1649250_3 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 389.0
MMS3_k127_1649250_4 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002953 277.0
MMS3_k127_1649250_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000314 280.0
MMS3_k127_1649250_6 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000002849 264.0
MMS3_k127_1649250_7 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001166 262.0
MMS3_k127_1649250_8 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000004644 208.0
MMS3_k127_1649250_9 - - - - 0.00001435 50.0
MMS3_k127_1659617_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 5.979e-312 973.0
MMS3_k127_1659617_1 Sugar (and other) transporter K08369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 561.0
MMS3_k127_1659617_2 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 297.0
MMS3_k127_1659617_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 290.0
MMS3_k127_1659617_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002087 238.0
MMS3_k127_1659617_5 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000001319 233.0
MMS3_k127_1659617_6 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000000000000000000000000000002185 220.0
MMS3_k127_1659617_7 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000000000000000000000000000000000002561 154.0
MMS3_k127_1661649_0 Periplasmic binding protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 529.0
MMS3_k127_1661649_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 521.0
MMS3_k127_1661649_10 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000006413 158.0
MMS3_k127_1661649_11 COG0411 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000001233 158.0
MMS3_k127_1661649_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000003258 124.0
MMS3_k127_1661649_2 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 447.0
MMS3_k127_1661649_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 357.0
MMS3_k127_1661649_4 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 349.0
MMS3_k127_1661649_5 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 344.0
MMS3_k127_1661649_6 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 348.0
MMS3_k127_1661649_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000001934 212.0
MMS3_k127_1661649_8 Major Facilitator Superfamily K08151 - - 0.000000000000000000000000000000000000000000004188 169.0
MMS3_k127_1661649_9 Flavin reductase like domain K16048 - - 0.00000000000000000000000000000000000000000001922 177.0
MMS3_k127_1665177_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1090.0
MMS3_k127_1665177_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.07e-236 751.0
MMS3_k127_1665177_10 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000008695 206.0
MMS3_k127_1665177_11 COG0314 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000006501 196.0
MMS3_k127_1665177_12 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000003404 149.0
MMS3_k127_1665177_13 transcriptional regulator - - - 0.00000000000000000000000000000000000009103 153.0
MMS3_k127_1665177_14 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000000000008655 119.0
MMS3_k127_1665177_15 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000002262 103.0
MMS3_k127_1665177_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 580.0
MMS3_k127_1665177_3 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 471.0
MMS3_k127_1665177_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 458.0
MMS3_k127_1665177_5 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 305.0
MMS3_k127_1665177_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 289.0
MMS3_k127_1665177_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002549 267.0
MMS3_k127_1665177_8 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000019 247.0
MMS3_k127_1665177_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000000000000000000000000000000000000000000000000000008683 219.0
MMS3_k127_1679503_0 lysine exporter protein (LysE YggA) K16327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001289 263.0
MMS3_k127_1679503_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003733 231.0
MMS3_k127_1679503_2 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000007535 216.0
MMS3_k127_1679503_3 Transposase - - - 0.00000000000000000000000000000002473 127.0
MMS3_k127_1679503_4 Glyoxalase-like domain - - - 0.000000000000000000008752 96.0
MMS3_k127_1679738_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 461.0
MMS3_k127_1679738_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 442.0
MMS3_k127_1679738_2 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 335.0
MMS3_k127_1679738_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 317.0
MMS3_k127_1679738_4 COG0512 Anthranilate para-aminobenzoate synthases component II K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 288.0
MMS3_k127_1679738_5 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000007357 205.0
MMS3_k127_1679738_6 Competence protein K02238 - - 0.000000000000000000000000000000000001562 143.0
MMS3_k127_1679738_7 N-acetyltransferase K03823 - 2.3.1.183 0.00000000000000000000000000000002696 128.0
MMS3_k127_1686762_0 TIGRFAM methylmalonic acid semialdehyde dehydrogenase K00140 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896 1.2.1.18,1.2.1.27 3.361e-228 712.0
MMS3_k127_1686762_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 591.0
MMS3_k127_1686762_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 379.0
MMS3_k127_1686762_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 288.0
MMS3_k127_1686762_4 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002668 280.0
MMS3_k127_1686762_5 methionine biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001144 268.0
MMS3_k127_1686762_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000005084 196.0
MMS3_k127_1686762_7 chorismate mutase - - - 0.0000000000000000000000000000000000000000000000000001266 196.0
MMS3_k127_1686762_8 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000002017 174.0
MMS3_k127_1688709_0 PFAM Methylated-DNA- protein -cysteine S-methyltransferase, DNA binding K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 474.0
MMS3_k127_1688709_1 catechol 1,2-dioxygenase K03381,K15253 - 1.13.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 336.0
MMS3_k127_1688709_2 Alkylated DNA repair protein K03919 - 1.14.11.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 294.0
MMS3_k127_1688709_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 291.0
MMS3_k127_1688709_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 265.0
MMS3_k127_1688709_5 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004428 255.0
MMS3_k127_1688709_6 Fumarylacetoacetate (FAA) hydrolase family K01617 - 4.1.1.77 0.00000000000000000000000000000000000000000000000000000000007793 216.0
MMS3_k127_1690411_0 Belongs to the aldehyde dehydrogenase family - - - 5.56e-249 777.0
MMS3_k127_1690411_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 508.0
MMS3_k127_1690411_2 Inhibitor of apoptosis-promoting Bax1 K06890 - - 0.0000000000000000000000000000000000000000000000000000000000000000001093 237.0
MMS3_k127_1690411_3 Protein of unknown function (DUF2794) - - - 0.0000000000000000000006199 99.0
MMS3_k127_1697509_0 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000002247 198.0
MMS3_k127_1697509_1 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.000000000000000000000000000000000000000000000000004805 184.0
MMS3_k127_1706376_0 transporter, ATP-binding protein K13926 - - 0.0 1307.0
MMS3_k127_1706376_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 552.0
MMS3_k127_1706376_2 Biotin-lipoyl like K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 449.0
MMS3_k127_1706376_3 Peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000003401 204.0
MMS3_k127_1706376_4 Cold shock K03704 - - 0.000000000000000000000000002242 113.0
MMS3_k127_1726574_0 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 372.0
MMS3_k127_1726574_1 ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 365.0
MMS3_k127_1726574_2 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 304.0
MMS3_k127_1741346_0 Aconitase family (aconitate hydratase) - - - 3.903e-205 649.0
MMS3_k127_1741346_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 531.0
MMS3_k127_1741346_10 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001269 204.0
MMS3_k127_1741346_11 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000003416 166.0
MMS3_k127_1741346_12 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000005269 157.0
MMS3_k127_1741346_13 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000001125 136.0
MMS3_k127_1741346_14 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001531 137.0
MMS3_k127_1741346_2 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 490.0
MMS3_k127_1741346_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 426.0
MMS3_k127_1741346_4 Acyl transferase domain K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000668 399.0
MMS3_k127_1741346_5 Enoyl-(Acyl carrier protein) reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 344.0
MMS3_k127_1741346_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 344.0
MMS3_k127_1741346_7 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 325.0
MMS3_k127_1741346_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000002332 233.0
MMS3_k127_1741346_9 membrane - - - 0.00000000000000000000000000000000000000000000000000000000005512 217.0
MMS3_k127_1753850_0 hormone biosynthetic process K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007262 277.0
MMS3_k127_1753850_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000007788 197.0
MMS3_k127_1753850_2 Protein of unknown function (DUF3800) - - - 0.0000000000000003659 88.0
MMS3_k127_1780489_0 lysyl-tRNA synthetase K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 388.0
MMS3_k127_1780489_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 362.0
MMS3_k127_1780489_2 AMP-binding enzyme K00666,K20034 - 6.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 321.0
MMS3_k127_1780489_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000003127 233.0
MMS3_k127_1780489_4 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000000000000003349 198.0
MMS3_k127_1780489_5 Protein of unknown function (DUF1465) K13592 - - 0.00000000005532 68.0
MMS3_k127_1804332_0 Transposase C of IS166 homeodomain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 575.0
MMS3_k127_1804332_1 Domain of unknown function DUF87 K06915 - - 0.000000000000000000000000001002 115.0
MMS3_k127_1818537_0 Molydopterin dinucleotide binding domain K18361,K21307 - 1.17.5.1,1.8.5.6,3.1.2.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 318.0
MMS3_k127_1818537_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000002127 224.0
MMS3_k127_1820246_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1315.0
MMS3_k127_1820246_1 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 339.0
MMS3_k127_1820246_2 sugar phosphatases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002412 254.0
MMS3_k127_1820246_3 COG2030 Acyl dehydratase K17865 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.00000000000000000000000000000000000000000000005131 176.0
MMS3_k127_1820246_4 chemotaxis protein K03414 - - 0.000000000000000000000000000000000000001071 157.0
MMS3_k127_1820246_5 Putative diguanylate phosphodiesterase K13593 - - 0.00000000000000000000005909 100.0
MMS3_k127_1821653_0 Carboxyl transferase domain - - - 4.542e-234 733.0
MMS3_k127_1821653_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 540.0
MMS3_k127_1821653_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 379.0
MMS3_k127_1821653_3 KR domain K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 339.0
MMS3_k127_1821653_4 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 - - 0.0000000000000000000000000000000002436 141.0
MMS3_k127_1821653_5 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 - - 0.00000000000000000000000000004605 135.0
MMS3_k127_1821653_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000008089 134.0
MMS3_k127_1821653_7 Biotin-requiring enzyme - - - 0.0000000000000124 77.0
MMS3_k127_1821653_8 pyridoxamine 5-phosphate - - - 0.00000000000002408 79.0
MMS3_k127_1821653_9 COG3666 Transposase and inactivated derivatives - - - 0.00008661 46.0
MMS3_k127_1825507_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 585.0
MMS3_k127_1825507_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 456.0
MMS3_k127_1825507_10 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000001716 112.0
MMS3_k127_1825507_11 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000002393 100.0
MMS3_k127_1825507_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 393.0
MMS3_k127_1825507_3 ABC transporter substrate-binding protein K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 387.0
MMS3_k127_1825507_4 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000745 199.0
MMS3_k127_1825507_5 Ubiquinol-cytochrome C chaperone K17662 - - 0.0000000000000000000000000000000000000000006357 164.0
MMS3_k127_1825507_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000001693 150.0
MMS3_k127_1825507_7 transcriptional regulator, MerR - - - 0.0000000000000000000000000000001038 132.0
MMS3_k127_1825507_8 COG2913 Small protein A (tmRNA-binding) - - - 0.00000000000000000000000000181 118.0
MMS3_k127_1825507_9 Ferredoxin K04755 - - 0.00000000000000000000000001201 112.0
MMS3_k127_1851649_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 5.061e-236 741.0
MMS3_k127_1851649_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006888 587.0
MMS3_k127_1851649_10 Maltose operon periplasmic protein precursor (MalM) - - - 0.00000000000000000000002883 107.0
MMS3_k127_1851649_11 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000002142 79.0
MMS3_k127_1851649_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 340.0
MMS3_k127_1851649_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 319.0
MMS3_k127_1851649_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 288.0
MMS3_k127_1851649_5 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000003612 205.0
MMS3_k127_1851649_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000004221 190.0
MMS3_k127_1851649_7 - - - - 0.0000000000000000000000000000000000000000000000000004352 192.0
MMS3_k127_1851649_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000139 176.0
MMS3_k127_1851649_9 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000002167 145.0
MMS3_k127_1886537_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 6.254e-277 861.0
MMS3_k127_1886537_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 550.0
MMS3_k127_1886537_10 Pfam:DUF1049 - - - 0.000000006172 61.0
MMS3_k127_1886537_11 - - - - 0.000611 46.0
MMS3_k127_1886537_2 Binding-protein-dependent transport system inner membrane component K15496 - - 0.0000000000000000000000000000000000000000000000000000000000000009912 229.0
MMS3_k127_1886537_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000003256 228.0
MMS3_k127_1886537_4 Bacterial extracellular solute-binding protein K15495 - - 0.00000000000000000000000000000000000000000000000000000000007986 216.0
MMS3_k127_1886537_5 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.0000000000000000000000000000000000000000000000000000003556 197.0
MMS3_k127_1886537_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000002308 176.0
MMS3_k127_1886537_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000004473 155.0
MMS3_k127_1886537_8 Part of the ABC transporter complex WtpABC involved in molybdate tungstate import. Responsible for energy coupling to the transport system (By similarity) K15497 - 3.6.3.55 0.0000000000000000000000000000000000002222 150.0
MMS3_k127_1886537_9 Protein of unknown function (FYDLN_acid) - - - 0.000000000000000000003341 97.0
MMS3_k127_1889241_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 563.0
MMS3_k127_1889241_1 Biotin carboxylase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 561.0
MMS3_k127_1889241_2 DNA invertase Pin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 505.0
MMS3_k127_1889241_3 LamB/YcsF family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 372.0
MMS3_k127_1889241_4 Pfam:CPSase_L_chain K01941 - 6.3.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 295.0
MMS3_k127_1889241_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000001223 219.0
MMS3_k127_1889241_6 Pfam:AHS1 - - - 0.00000000000000000000000000000000000000000000000000000002573 210.0
MMS3_k127_1889241_7 Biotin-requiring enzyme - - - 0.0000000000000003587 82.0
MMS3_k127_1889374_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 546.0
MMS3_k127_1889374_1 His Kinase A (phosphoacceptor) domain K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 410.0
MMS3_k127_1889374_2 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 327.0
MMS3_k127_1889374_3 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 314.0
MMS3_k127_1889374_4 PFAM response regulator receiver K15012 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004328 264.0
MMS3_k127_1889374_5 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001832 266.0
MMS3_k127_1889374_6 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000009627 188.0
MMS3_k127_1889374_7 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000001251 157.0
MMS3_k127_1889374_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K16049 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006066,GO:0006629,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0009056,GO:0009405,GO:0010033,GO:0014070,GO:0016042,GO:0016125,GO:0016127,GO:0016491,GO:0016701,GO:0016702,GO:0033993,GO:0036314,GO:0042221,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044419,GO:0046164,GO:0046872,GO:0046914,GO:0047071,GO:0050896,GO:0051213,GO:0051704,GO:0055114,GO:0070723,GO:0071704,GO:0097305,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616,GO:1901700,GO:1902652 1.13.11.25 0.0000000000000000000000000000000000004542 151.0
MMS3_k127_1990781_0 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.0 1247.0
MMS3_k127_1990781_1 COG0437 Fe-S-cluster-containing hydrogenase components 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009704 417.0
MMS3_k127_1990781_2 DMSO reductase anchor subunit K21309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 335.0
MMS3_k127_1990781_3 Membrane-associated sensor, integral membrane domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000125 284.0
MMS3_k127_1990781_4 Secreted repeat of unknown function - - - 0.0000000000000000000000000000001265 128.0
MMS3_k127_199159_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1172.0
MMS3_k127_199159_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 8.225e-227 712.0
MMS3_k127_199159_2 Amidase - - - 7.821e-208 657.0
MMS3_k127_199159_3 ABC-type branched-chain amino acid transport K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 563.0
MMS3_k127_199159_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 501.0
MMS3_k127_199159_5 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 387.0
MMS3_k127_199159_6 KR domain K21883 - 1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 323.0
MMS3_k127_199159_7 Alkyl sulfatase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 324.0
MMS3_k127_199159_8 SOS response K14160 - - 0.000000000000000000000000000000000003179 147.0
MMS3_k127_202927_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1354.0
MMS3_k127_202927_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.323e-286 895.0
MMS3_k127_202927_10 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000005154 128.0
MMS3_k127_202927_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000006534 89.0
MMS3_k127_202927_12 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000889 87.0
MMS3_k127_202927_13 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000004606 86.0
MMS3_k127_202927_14 Hemerythrin HHE cation binding domain - - - 0.00000000000001022 80.0
MMS3_k127_202927_15 SMART protein phosphatase 2C domain protein - - - 0.00000000009238 73.0
MMS3_k127_202927_16 - - - - 0.000001919 51.0
MMS3_k127_202927_2 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 395.0
MMS3_k127_202927_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 308.0
MMS3_k127_202927_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 292.0
MMS3_k127_202927_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001086 286.0
MMS3_k127_202927_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000001141 266.0
MMS3_k127_202927_7 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003377 249.0
MMS3_k127_202927_8 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001437 247.0
MMS3_k127_202927_9 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000009375 225.0
MMS3_k127_2065057_0 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 537.0
MMS3_k127_2065057_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 456.0
MMS3_k127_2065057_2 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 347.0
MMS3_k127_2065057_3 Protein of unknown function (DUF2786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 304.0
MMS3_k127_2065057_5 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates - - - 0.000000000000000000000000000000000000000000009743 164.0
MMS3_k127_2065057_6 CBS domain - - - 0.000000000000000000000000000000000008032 141.0
MMS3_k127_2065057_7 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000000000000000000000000000001149 140.0
MMS3_k127_2065057_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000004339 127.0
MMS3_k127_2065057_9 - - - - 0.000000001154 62.0
MMS3_k127_2132327_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 7.571e-194 623.0
MMS3_k127_2132327_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 482.0
MMS3_k127_2132327_2 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 366.0
MMS3_k127_2132327_3 Zn-dependent protease, contains TPR repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 371.0
MMS3_k127_2132327_4 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000001624 221.0
MMS3_k127_2151751_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 592.0
MMS3_k127_2151751_1 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 414.0
MMS3_k127_2151751_2 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 368.0
MMS3_k127_2151751_3 CobW/HypB/UreG, nucleotide-binding domain K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 346.0
MMS3_k127_2151751_4 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.0000000000000000000000000000000000000000000000000000000000000000005961 235.0
MMS3_k127_2151751_5 UreE urease accessory protein, N-terminal domain K03187 - - 0.0000000000000000000000000000000000000000000002316 176.0
MMS3_k127_2173269_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1225.0
MMS3_k127_2173269_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.805e-247 782.0
MMS3_k127_2173269_10 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 296.0
MMS3_k127_2173269_11 Peptidase family S49 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002047 285.0
MMS3_k127_2173269_12 Cytidylyltransferase K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008901 274.0
MMS3_k127_2173269_13 Methyltransferase small domain - - - 0.0000000000000000000000000000000000000000000000000000000000001889 225.0
MMS3_k127_2173269_14 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000001085 150.0
MMS3_k127_2173269_15 Phosphopantetheine attachment site - - - 0.00000000000000000000000001302 111.0
MMS3_k127_2173269_16 Putative prokaryotic signal transducing protein - - - 0.0000000008404 63.0
MMS3_k127_2173269_17 - - - - 0.00000004095 58.0
MMS3_k127_2173269_18 - - - - 0.00001818 50.0
MMS3_k127_2173269_2 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 528.0
MMS3_k127_2173269_3 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 520.0
MMS3_k127_2173269_4 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 520.0
MMS3_k127_2173269_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 447.0
MMS3_k127_2173269_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 416.0
MMS3_k127_2173269_7 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 408.0
MMS3_k127_2173269_8 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 405.0
MMS3_k127_2173269_9 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 392.0
MMS3_k127_2187465_0 CoA binding domain K17069 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003961,GO:0004124,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0050667,GO:0071265,GO:0071266,GO:0071268,GO:0071269,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47,2.5.1.49 1.85e-217 680.0
MMS3_k127_2187465_1 Enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 344.0
MMS3_k127_2187465_2 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001126 242.0
MMS3_k127_2190158_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 3.105e-253 788.0
MMS3_k127_2190158_1 Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 585.0
MMS3_k127_2190158_2 acyl-CoA dehydrogenase K06446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 533.0
MMS3_k127_2190158_3 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 390.0
MMS3_k127_2190158_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000013 77.0
MMS3_k127_2195895_0 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 4.528e-296 921.0
MMS3_k127_2195895_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K14446 - 1.3.1.85 3.09e-243 757.0
MMS3_k127_2195895_2 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 615.0
MMS3_k127_2195895_3 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 564.0
MMS3_k127_2195895_4 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 499.0
MMS3_k127_2195895_5 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 458.0
MMS3_k127_2195895_6 3-Hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 402.0
MMS3_k127_2195895_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 300.0
MMS3_k127_2197243_0 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 300.0
MMS3_k127_2197243_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 292.0
MMS3_k127_2197243_2 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002105 268.0
MMS3_k127_2197243_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000539 217.0
MMS3_k127_2197243_4 40-residue YVTN family beta-propeller repeat - - - 0.000000000002571 70.0
MMS3_k127_2206766_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 543.0
MMS3_k127_2206766_1 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 517.0
MMS3_k127_2206766_2 FAD dependent oxidoreductase K19746 - 1.4.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 434.0
MMS3_k127_2206766_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.00000000000000000000000000000000000000005581 154.0
MMS3_k127_2206766_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000001541 148.0
MMS3_k127_2213827_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 4.878e-250 786.0
MMS3_k127_2213827_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 5.571e-227 722.0
MMS3_k127_2213827_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 460.0
MMS3_k127_2213827_3 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 298.0
MMS3_k127_2213827_4 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000004729 214.0
MMS3_k127_2213827_5 - - - - 0.000000000000000000000000007205 116.0
MMS3_k127_2213827_6 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000002113 89.0
MMS3_k127_2226603_0 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 307.0
MMS3_k127_2226603_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000007404 184.0
MMS3_k127_2243906_0 Deoxyribodipyrimidine photo-lyase-related protein K06876 GO:0000166,GO:0000719,GO:0003674,GO:0003824,GO:0003913,GO:0003914,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 1.625e-265 824.0
MMS3_k127_2243906_1 amino acid K01999 - - 3.636e-208 654.0
MMS3_k127_2243906_2 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 287.0
MMS3_k127_2243906_3 Enoyl-CoA hydratase/isomerase K20036 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0034214,GO:0043933,GO:0044085,GO:0051259,GO:0065003,GO:0071840 4.2.1.155 0.00000000000000000000000000000000000000000000000000000000000000000000001084 243.0
MMS3_k127_2254476_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1580.0
MMS3_k127_2254476_1 - - - - 2.733e-253 797.0
MMS3_k127_2254476_2 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 596.0
MMS3_k127_2254476_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 462.0
MMS3_k127_2254476_4 nucleoside-diphosphate sugar epimerase K07276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 333.0
MMS3_k127_2254476_5 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008629 312.0
MMS3_k127_2254476_6 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002144 248.0
MMS3_k127_2254476_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000001727 229.0
MMS3_k127_2254476_8 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000004012 165.0
MMS3_k127_2255713_0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 2.258e-209 660.0
MMS3_k127_2255713_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 435.0
MMS3_k127_2255713_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 423.0
MMS3_k127_2255713_3 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000001011 209.0
MMS3_k127_2255713_4 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000004713 156.0
MMS3_k127_2255713_5 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000222 133.0
MMS3_k127_2263988_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1483.0
MMS3_k127_2263988_1 Histidine kinase K07673 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 392.0
MMS3_k127_2263988_2 PFAM Glycosyl transferase, family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 362.0
MMS3_k127_2263988_3 response regulator receiver K07684 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002048 276.0
MMS3_k127_2266765_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 392.0
MMS3_k127_2266765_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 325.0
MMS3_k127_2266765_2 ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000005506 236.0
MMS3_k127_2271874_0 Belongs to the IlvD Edd family K13875 - 4.2.1.25 6.839e-275 857.0
MMS3_k127_2271874_1 Nad-dependent epimerase dehydratase K22025 - 1.1.1.410 0.00000000000000000000000000000000000000000000000001389 186.0
MMS3_k127_2271874_2 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.0000000000000000000004512 98.0
MMS3_k127_2273137_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 533.0
MMS3_k127_2273137_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 336.0
MMS3_k127_2273137_2 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 314.0
MMS3_k127_2273137_3 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008257 288.0
MMS3_k127_2275574_0 4-hydroxybenzoate 3-monooxygenase K00481 - 1.14.13.2 8.875e-207 647.0
MMS3_k127_2275574_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 517.0
MMS3_k127_2275574_2 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 411.0
MMS3_k127_2275574_3 Dioxygenase K00448 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 335.0
MMS3_k127_2275574_4 Serine aminopeptidase, S33 K01055,K14727 - 3.1.1.24,4.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 330.0
MMS3_k127_2275574_5 helix_turn_helix, arabinose operon control protein K18954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 332.0
MMS3_k127_2275574_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000005031 216.0
MMS3_k127_2275574_7 Serine aminopeptidase, S33 K01055,K14727 - 3.1.1.24,4.1.1.44 0.00000000000000000000000000000000000000000000000000000000008208 205.0
MMS3_k127_2275574_8 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000008115 52.0
MMS3_k127_2291450_0 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 544.0
MMS3_k127_2291450_1 Acetamidase/Formamidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 503.0
MMS3_k127_2291450_10 AraC family K07506 - - 0.000000000000000000000000001949 115.0
MMS3_k127_2291450_11 lactoylglutathione lyase activity - - - 0.00000000000000000001075 96.0
MMS3_k127_2291450_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 379.0
MMS3_k127_2291450_3 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 372.0
MMS3_k127_2291450_4 abc transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 360.0
MMS3_k127_2291450_5 amino acid K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 349.0
MMS3_k127_2291450_6 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 320.0
MMS3_k127_2291450_7 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000119 193.0
MMS3_k127_2291450_8 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000001964 126.0
MMS3_k127_2291450_9 Aldolase/RraA - - - 0.0000000000000000000000000003927 114.0
MMS3_k127_2311822_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 8.891e-299 936.0
MMS3_k127_2311822_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 525.0
MMS3_k127_2311822_2 membrane - - - 0.000000000000000000000000000000000000000005619 157.0
MMS3_k127_2311822_3 Transcriptional regulator - - - 0.0000000000000000000000000000000008294 137.0
MMS3_k127_2311822_4 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.000000000000000000000004222 106.0
MMS3_k127_2311822_5 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000002892 77.0
MMS3_k127_2314410_0 DNA polymerase X family K02347 - - 3.362e-206 656.0
MMS3_k127_2314410_1 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 372.0
MMS3_k127_2314410_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000004338 173.0
MMS3_k127_2317089_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 1.068e-281 897.0
MMS3_k127_2317089_1 flagellum-specific ATP synthase K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 603.0
MMS3_k127_2317089_10 Histidine phosphotransferase C-terminal domain K13588 - - 0.00000000000000000000000000000000000005393 151.0
MMS3_k127_2317089_11 - - - - 0.00000000000000000002364 102.0
MMS3_k127_2317089_12 Flagellar FliJ protein - - - 0.0000000000000000001896 93.0
MMS3_k127_2317089_2 Transcriptional regulatory protein, C terminal K02483,K13584 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 384.0
MMS3_k127_2317089_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 384.0
MMS3_k127_2317089_4 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 296.0
MMS3_k127_2317089_5 Inositol monophosphatase family K01082 GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0008934,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019637,GO:0019693,GO:0030145,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042132,GO:0042578,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050308,GO:0050427,GO:0050897,GO:0052745,GO:0052834,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 273.0
MMS3_k127_2317089_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000001603 226.0
MMS3_k127_2317089_7 COG0835 Chemotaxis signal transduction protein K03408 - - 0.00000000000000000000000000000000000000000000000000003846 191.0
MMS3_k127_2317089_8 COG0784 FOG CheY-like receiver K03413 - - 0.0000000000000000000000000000000000000000000000002757 178.0
MMS3_k127_2317089_9 COG0604 NADPH quinone reductase and related Zn-dependent K00001,K19745 - 1.1.1.1 0.000000000000000000000000000000000000008217 147.0
MMS3_k127_2448577_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 532.0
MMS3_k127_2448577_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005646 378.0
MMS3_k127_2448577_2 peroxidase K07223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 344.0
MMS3_k127_2448577_3 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001611 243.0
MMS3_k127_2448577_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000000000000000000001937 236.0
MMS3_k127_2448577_5 Bacterial protein of unknown function (DUF883) - - - 0.000005493 53.0
MMS3_k127_2461161_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 608.0
MMS3_k127_2461161_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 309.0
MMS3_k127_2461161_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000002021 177.0
MMS3_k127_2461161_3 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000005161 95.0
MMS3_k127_2461161_4 - - - - 0.00000007123 61.0
MMS3_k127_2491818_0 COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - - - 2.696e-320 1000.0
MMS3_k127_2491818_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 620.0
MMS3_k127_2491818_2 Phosphomethylpyrimidine kinase K16370 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000313 196.0
MMS3_k127_260425_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 2.149e-235 755.0
MMS3_k127_260425_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 314.0
MMS3_k127_260425_2 Belongs to the BI1 family K06890 - - 0.0004293 44.0
MMS3_k127_2613531_0 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 481.0
MMS3_k127_2613531_1 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000001545 243.0
MMS3_k127_2613531_2 - - - - 0.00000000000000000000000000000000000000000000000000000005054 200.0
MMS3_k127_2613531_3 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000001016 146.0
MMS3_k127_2661489_0 Biotin carboxylase C-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 9.799e-204 642.0
MMS3_k127_2661489_1 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 346.0
MMS3_k127_2661489_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004334 279.0
MMS3_k127_2661489_3 COG3474 Cytochrome c2 K08738 - - 0.00000000000000000000000000000000000000000000000000000000000000004683 233.0
MMS3_k127_2661489_4 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000007413 207.0
MMS3_k127_2661489_5 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.00000000000000000000000000000000000000000000000000000005845 199.0
MMS3_k127_2661489_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000001524 153.0
MMS3_k127_2717996_0 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 4.702e-312 966.0
MMS3_k127_2717996_1 COG1138 Cytochrome c biogenesis factor K02198 - - 2.63e-273 856.0
MMS3_k127_2717996_10 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 302.0
MMS3_k127_2717996_11 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000002842 241.0
MMS3_k127_2717996_12 Nudix N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000006775 235.0
MMS3_k127_2717996_13 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000009561 218.0
MMS3_k127_2717996_14 AhpC/TSA family K02199 - - 0.00000000000000000000000000000000000000000000000000000005068 202.0
MMS3_k127_2717996_15 methyltransferase - - - 0.000000000000000000000000000000000000000000001222 175.0
MMS3_k127_2717996_16 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000001588 169.0
MMS3_k127_2717996_17 COG4235 Cytochrome c biogenesis factor K02200 - - 0.00000000000000000000000000000000000000000002736 173.0
MMS3_k127_2717996_18 MlaC protein K07323 - - 0.0000000000000000000000000000000000000003096 157.0
MMS3_k127_2717996_19 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000009838 131.0
MMS3_k127_2717996_2 Exporters of the RND superfamily - - - 2.036e-212 690.0
MMS3_k127_2717996_20 PFAM purine or other phosphorylase family 1 K01243 - 3.2.2.9 0.000000000000000000000000000007828 128.0
MMS3_k127_2717996_21 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0002481 49.0
MMS3_k127_2717996_3 Domain of unknown function (DUF3463) - - - 1.267e-201 632.0
MMS3_k127_2717996_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 484.0
MMS3_k127_2717996_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 459.0
MMS3_k127_2717996_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 367.0
MMS3_k127_2717996_7 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 338.0
MMS3_k127_2717996_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 323.0
MMS3_k127_2717996_9 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 308.0
MMS3_k127_2726172_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 5.143e-313 974.0
MMS3_k127_2726172_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.069e-245 769.0
MMS3_k127_2726172_10 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 286.0
MMS3_k127_2726172_11 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000313 286.0
MMS3_k127_2726172_12 Glutaredoxin K07390 - - 0.000000000000000000000000000000000000000000000003892 174.0
MMS3_k127_2726172_13 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.000000000000000000000000000000000000000000000009527 177.0
MMS3_k127_2726172_14 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000002331 130.0
MMS3_k127_2726172_15 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000005328 129.0
MMS3_k127_2726172_16 Domain of unknown function (DUF1476) - - - 0.00000000000000000000001512 103.0
MMS3_k127_2726172_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 2.173e-202 640.0
MMS3_k127_2726172_3 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 446.0
MMS3_k127_2726172_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 401.0
MMS3_k127_2726172_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 339.0
MMS3_k127_2726172_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 304.0
MMS3_k127_2726172_7 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 288.0
MMS3_k127_2726172_8 Sugar fermentation stimulation protein K06206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 289.0
MMS3_k127_2726172_9 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 287.0
MMS3_k127_2744041_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K16877 - 1.3.99.8 7.284e-253 794.0
MMS3_k127_2744041_1 carbon monoxide dehydrogenase K03519,K16878 - 1.2.5.3,1.3.99.8 0.000000000000000000000000000000000000004091 154.0
MMS3_k127_2744324_0 C-terminal, D2-small domain, of ClpB protein K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 5.574e-274 852.0
MMS3_k127_2744324_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 466.0
MMS3_k127_2744324_10 - - - - 0.000000000000000000000000000000000000000001446 160.0
MMS3_k127_2744324_11 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000138 133.0
MMS3_k127_2744324_12 phasin family - - - 0.0000000001237 68.0
MMS3_k127_2744324_13 metal-dependent phosphohydrolase HD sub domain K07814 - - 0.000003861 51.0
MMS3_k127_2744324_2 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 448.0
MMS3_k127_2744324_3 Quinone oxidoreductase K00001,K00344 - 1.1.1.1,1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 358.0
MMS3_k127_2744324_4 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 343.0
MMS3_k127_2744324_5 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 319.0
MMS3_k127_2744324_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 306.0
MMS3_k127_2744324_7 ATPases associated with a variety of cellular activities K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001068 288.0
MMS3_k127_2744324_8 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003058 258.0
MMS3_k127_2744324_9 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000007056 188.0
MMS3_k127_2744915_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1019.0
MMS3_k127_2744915_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.5e-323 1004.0
MMS3_k127_2744915_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 307.0
MMS3_k127_2744915_11 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001221 286.0
MMS3_k127_2744915_12 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000005542 261.0
MMS3_k127_2744915_13 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002064 262.0
MMS3_k127_2744915_14 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.00000000000000000000000000000000000000000000000000000000000275 209.0
MMS3_k127_2744915_15 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000001339 211.0
MMS3_k127_2744915_16 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000002079 200.0
MMS3_k127_2744915_17 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000002026 180.0
MMS3_k127_2744915_18 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000000000000000003031 172.0
MMS3_k127_2744915_19 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000003109 170.0
MMS3_k127_2744915_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.078e-284 892.0
MMS3_k127_2744915_20 Acyl-CoA hydrolase K10806 - - 0.000000000000000000000000000000001036 134.0
MMS3_k127_2744915_21 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000304 126.0
MMS3_k127_2744915_22 Lytic transglycolase K03642 - - 0.000000000000000000000000000001995 128.0
MMS3_k127_2744915_3 glutamine synthetase K01915 - 6.3.1.2 3.208e-243 759.0
MMS3_k127_2744915_4 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 563.0
MMS3_k127_2744915_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 394.0
MMS3_k127_2744915_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 345.0
MMS3_k127_2744915_7 COG2041 Sulfite oxidase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 322.0
MMS3_k127_2744915_8 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 316.0
MMS3_k127_2744915_9 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 312.0
MMS3_k127_2745893_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.218e-274 851.0
MMS3_k127_2745893_1 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 497.0
MMS3_k127_2745893_2 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 440.0
MMS3_k127_2745893_3 antibiotic catabolic process - - - 0.00000002838 57.0
MMS3_k127_2750850_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 5.31e-308 951.0
MMS3_k127_2750850_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 396.0
MMS3_k127_2750850_2 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 341.0
MMS3_k127_2750850_3 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.00000000000000000000000000000000000000000000001063 173.0
MMS3_k127_2750850_4 succinate dehydrogenase K00242 - - 0.00000000000000000000000000000003521 129.0
MMS3_k127_2752741_0 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 421.0
MMS3_k127_2752741_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 349.0
MMS3_k127_275459_0 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 556.0
MMS3_k127_275459_1 AMP-binding enzyme C-terminal domain K16876 - 6.2.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 541.0
MMS3_k127_275459_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 375.0
MMS3_k127_275459_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001771 224.0
MMS3_k127_275459_4 - - - - 0.00000000000000000000000000729 121.0
MMS3_k127_2778303_0 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001997 282.0
MMS3_k127_2778303_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000003465 127.0
MMS3_k127_2778303_2 - - - - 0.000000000000000000003214 102.0
MMS3_k127_2778726_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 572.0
MMS3_k127_2778726_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 306.0
MMS3_k127_2778726_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000133 276.0
MMS3_k127_2778726_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000167 256.0
MMS3_k127_2778726_4 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008303 237.0
MMS3_k127_2778726_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000137 249.0
MMS3_k127_2799184_0 PFAM carboxyl transferase K13778 - 6.4.1.5 4.083e-227 714.0
MMS3_k127_2799184_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 487.0
MMS3_k127_2799184_2 KR domain K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 421.0
MMS3_k127_2799184_3 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 390.0
MMS3_k127_2799184_4 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 377.0
MMS3_k127_2799184_5 ATPases associated with a variety of cellular activities K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 352.0
MMS3_k127_2799184_6 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 312.0
MMS3_k127_2799184_7 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 306.0
MMS3_k127_2799184_8 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000398 154.0
MMS3_k127_2799184_9 SCP-2 sterol transfer family - - - 0.000000000000000000000000000000009879 129.0
MMS3_k127_2803413_0 lysine 2,3-aminomutase - - - 4.513e-196 620.0
MMS3_k127_2803413_1 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 463.0
MMS3_k127_2803413_2 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 453.0
MMS3_k127_2803413_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 392.0
MMS3_k127_2803413_4 D-ala D-ala ligase C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 369.0
MMS3_k127_2803413_5 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 345.0
MMS3_k127_2803413_6 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000003894 224.0
MMS3_k127_2803413_7 Metal dependent phosphohydrolases with conserved 'HD' motif. K01129 - 3.1.5.1 0.0000000000000000000000004469 108.0
MMS3_k127_2803413_8 epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000002893 91.0
MMS3_k127_2804591_0 Belongs to the D-glutamate cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 350.0
MMS3_k127_2804591_1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 332.0
MMS3_k127_2804591_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 285.0
MMS3_k127_2804591_3 PFAM Carbohydrate-selective porin OprB K07267 - - 0.000000000000000000003297 96.0
MMS3_k127_2805950_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 4.547e-248 777.0
MMS3_k127_2805950_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000000007027 197.0
MMS3_k127_280787_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 593.0
MMS3_k127_280787_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 422.0
MMS3_k127_280787_2 Alkyl sulfatase dimerisation - - - 0.000000000000000000000000000000000000000000000000000000000007797 211.0
MMS3_k127_280787_3 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.00000000000000000000000000000000007449 135.0
MMS3_k127_280787_4 transcriptional regulator K22295 - - 0.000000000000000000000000000001769 130.0
MMS3_k127_2821649_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 495.0
MMS3_k127_2821649_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000006979 152.0
MMS3_k127_2821649_2 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000175 128.0
MMS3_k127_2821649_3 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000005714 120.0
MMS3_k127_2828436_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 456.0
MMS3_k127_2828436_1 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 429.0
MMS3_k127_2828436_2 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000001373 135.0
MMS3_k127_284068_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 585.0
MMS3_k127_284068_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 432.0
MMS3_k127_284068_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 397.0
MMS3_k127_284068_3 Cytochrome c1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000189 268.0
MMS3_k127_284068_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000004965 213.0
MMS3_k127_284068_5 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000002105 173.0
MMS3_k127_284068_6 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000006581 158.0
MMS3_k127_2870314_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 407.0
MMS3_k127_2870314_1 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 420.0
MMS3_k127_2870314_2 5-oxoprolinase K01473 - 3.5.2.14 0.0000000001359 67.0
MMS3_k127_28751_0 Oligopeptidase F K08602 - - 2.325e-232 756.0
MMS3_k127_28751_1 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 618.0
MMS3_k127_28751_2 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.00000000003078 64.0
MMS3_k127_2899364_0 COG2801 Transposase and inactivated derivatives K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 545.0
MMS3_k127_2899364_1 Transposase - - - 0.000000000000000000000000000000000000000000001944 166.0
MMS3_k127_2899571_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.662e-281 871.0
MMS3_k127_2899571_1 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 3.455e-209 661.0
MMS3_k127_2899571_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000001015 166.0
MMS3_k127_2899571_11 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000001364 153.0
MMS3_k127_2899571_12 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.0000000000000001792 91.0
MMS3_k127_2899571_2 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 594.0
MMS3_k127_2899571_3 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 477.0
MMS3_k127_2899571_4 Belongs to the HpcH HpaI aldolase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 410.0
MMS3_k127_2899571_5 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 336.0
MMS3_k127_2899571_6 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002293 286.0
MMS3_k127_2899571_7 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000005562 226.0
MMS3_k127_2899571_8 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000001778 203.0
MMS3_k127_2899571_9 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000004103 207.0
MMS3_k127_2906884_0 Threonine synthase N terminus K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 549.0
MMS3_k127_2906884_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 340.0
MMS3_k127_2906884_2 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000397 263.0
MMS3_k127_2915734_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.938e-269 850.0
MMS3_k127_2915734_1 aminopeptidase K01262 - 3.4.11.9 3.582e-244 771.0
MMS3_k127_2915734_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 GO:0000175,GO:0003674,GO:0003724,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016896,GO:0017111,GO:0019222,GO:0019439,GO:0034458,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 4.62e-226 723.0
MMS3_k127_2915734_3 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 501.0
MMS3_k127_2915734_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 339.0
MMS3_k127_2915734_5 COG0784 FOG CheY-like receiver K11443 - - 0.0000000000000000000000000000000000000000000000000000000000000658 216.0
MMS3_k127_2915734_6 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000006323 196.0
MMS3_k127_2915734_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000005135 99.0
MMS3_k127_2916615_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1058.0
MMS3_k127_2916615_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.57e-287 895.0
MMS3_k127_2916615_2 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 434.0
MMS3_k127_2916615_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000165 59.0
MMS3_k127_2919641_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 415.0
MMS3_k127_2919641_1 ATPases associated with a variety of cellular activities K01995,K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 372.0
MMS3_k127_2919641_2 ATPases associated with a variety of cellular activities K01996,K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 333.0
MMS3_k127_2919641_3 COG4177 ABC-type branched-chain amino acid transport system, permease component - - - 0.0006317 43.0
MMS3_k127_296418_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 501.0
MMS3_k127_296418_1 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 388.0
MMS3_k127_296418_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001242 278.0
MMS3_k127_2967308_0 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 582.0
MMS3_k127_2967308_1 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 522.0
MMS3_k127_2967308_2 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 497.0
MMS3_k127_2967308_3 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 335.0
MMS3_k127_2967308_4 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 303.0
MMS3_k127_2967308_5 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001931 261.0
MMS3_k127_2967308_6 PFAM Methyltransferase type - - - 0.0000000000000000000000000000000000000000000000000000788 201.0
MMS3_k127_2967308_7 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000000000000001843 158.0
MMS3_k127_2967308_8 Methyltransferase domain - - - 0.00000000000000000000000000000005686 130.0
MMS3_k127_2967308_9 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.0000000000000000000000000002684 116.0
MMS3_k127_2998671_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.235e-231 724.0
MMS3_k127_2998671_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.796e-222 699.0
MMS3_k127_2998671_10 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000006088 115.0
MMS3_k127_2998671_2 Protein of unknown function (DUF3376) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008119 629.0
MMS3_k127_2998671_3 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 533.0
MMS3_k127_2998671_4 Belongs to the HpcH HpaI aldolase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 412.0
MMS3_k127_2998671_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 384.0
MMS3_k127_2998671_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 334.0
MMS3_k127_2998671_7 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005302 265.0
MMS3_k127_2998671_8 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000001687 240.0
MMS3_k127_2998671_9 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000004456 171.0
MMS3_k127_3004370_0 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 531.0
MMS3_k127_3004370_1 PFAM ROK family protein K00845,K00847 - 2.7.1.2,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 398.0
MMS3_k127_3004370_2 transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 399.0
MMS3_k127_3004370_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 353.0
MMS3_k127_3004370_4 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005831 286.0
MMS3_k127_3004370_5 Domain of unknown function (DUF1849) - - - 0.0000000000001373 74.0
MMS3_k127_30615_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 610.0
MMS3_k127_30615_1 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 428.0
MMS3_k127_30615_2 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008848 353.0
MMS3_k127_30615_3 NADP transhydrogenase K00324 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.000000000000000000000000000000000001218 140.0
MMS3_k127_307337_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 570.0
MMS3_k127_307337_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 538.0
MMS3_k127_307337_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 340.0
MMS3_k127_307337_3 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 297.0
MMS3_k127_307337_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000008712 103.0
MMS3_k127_3090008_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1180.0
MMS3_k127_3090008_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 382.0
MMS3_k127_3090008_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 323.0
MMS3_k127_3090008_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003554 266.0
MMS3_k127_3090008_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000003441 228.0
MMS3_k127_3122620_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 421.0
MMS3_k127_3122620_1 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008985 355.0
MMS3_k127_3122620_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000003641 271.0
MMS3_k127_3122620_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004317 244.0
MMS3_k127_3122620_4 - - - - 0.00000000000000000000000000000000000003881 145.0
MMS3_k127_3183563_0 PFAM transposase, IS4 family protein - - - 9.355e-275 854.0
MMS3_k127_3203317_0 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006623 603.0
MMS3_k127_3203317_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 515.0
MMS3_k127_3203317_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 489.0
MMS3_k127_3203317_3 protein conserved in bacteria K09778 - - 0.000000000000000000000000000000000000000000000000000000000000000000004402 245.0
MMS3_k127_3203317_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000001303 224.0
MMS3_k127_3203317_5 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000008842 226.0
MMS3_k127_3203317_6 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000003082 127.0
MMS3_k127_3203317_7 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000003523 87.0
MMS3_k127_3242877_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 613.0
MMS3_k127_3242877_1 KR domain K13775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 318.0
MMS3_k127_3274328_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 557.0
MMS3_k127_3274328_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 337.0
MMS3_k127_3274328_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001742 283.0
MMS3_k127_3274328_3 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000003993 201.0
MMS3_k127_3274328_4 Septum formation initiator - - - 0.000000000000005737 79.0
MMS3_k127_3278388_0 efflux transmembrane transporter activity K01990 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006855,GO:0008150,GO:0015562,GO:0015893,GO:0016020,GO:0022857,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 1.856e-194 625.0
MMS3_k127_3278388_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 456.0
MMS3_k127_3278388_2 Abc-type multidrug transport system, permease component K01992 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 456.0
MMS3_k127_3278388_3 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 417.0
MMS3_k127_3278388_4 Secretion protein, HlyD K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001279 274.0
MMS3_k127_3284582_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates - - - 9.351e-309 959.0
MMS3_k127_3284582_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002131 249.0
MMS3_k127_3285067_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.536e-232 735.0
MMS3_k127_3285067_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 6.492e-207 648.0
MMS3_k127_3285067_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 348.0
MMS3_k127_3285067_3 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 347.0
MMS3_k127_3285067_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.00000000000000000000000000000000000000000000000000000000007104 207.0
MMS3_k127_3285067_5 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000007286 163.0
MMS3_k127_3285067_6 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000592 132.0
MMS3_k127_3285067_7 Belongs to the GPI family K01810,K13810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.2.1.2,5.3.1.9 0.00000000001265 64.0
MMS3_k127_3317696_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.32e-242 764.0
MMS3_k127_3317696_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 491.0
MMS3_k127_3317696_2 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 489.0
MMS3_k127_3317696_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 446.0
MMS3_k127_3328856_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 4.593e-234 732.0
MMS3_k127_3328856_1 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 473.0
MMS3_k127_3328856_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 387.0
MMS3_k127_3328856_3 FIST C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 389.0
MMS3_k127_3328856_4 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 349.0
MMS3_k127_3328856_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 343.0
MMS3_k127_3328856_6 Branched-chain amino acid ATP-binding cassette transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 335.0
MMS3_k127_3328856_7 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 325.0
MMS3_k127_3328856_8 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005058 297.0
MMS3_k127_3328856_9 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002676 256.0
MMS3_k127_3343514_0 benzoyl-CoA oxygenase - - - 4.787e-203 638.0
MMS3_k127_3343514_1 Amidase K02433 - 6.3.5.6,6.3.5.7 2.2e-200 634.0
MMS3_k127_3343514_2 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 514.0
MMS3_k127_3343514_3 Phytoene synthase K21678 - 2.5.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 322.0
MMS3_k127_3343514_4 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.0000000000000000000000000000000000000000000000000000000000000006625 223.0
MMS3_k127_3343514_5 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000003734 158.0
MMS3_k127_3343514_6 - - - - 0.00000000000000000009854 94.0
MMS3_k127_3380434_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 5.269e-214 674.0
MMS3_k127_3380434_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000002872 87.0
MMS3_k127_3383945_0 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 357.0
MMS3_k127_3383945_1 AefR-like transcriptional repressor, C-terminal region - - - 0.00000000000000000000000000000000000000006021 158.0
MMS3_k127_3389139_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 9.481e-243 762.0
MMS3_k127_3389139_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000008927 177.0
MMS3_k127_3389744_0 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 417.0
MMS3_k127_3389744_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001073 265.0
MMS3_k127_3389744_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009661 259.0
MMS3_k127_3389744_3 PFAM glycoside hydrolase family 3 domain protein K01207,K05349 - 3.2.1.21,3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000338 224.0
MMS3_k127_3390509_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 516.0
MMS3_k127_3390509_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 400.0
MMS3_k127_3390509_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 359.0
MMS3_k127_3390509_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003581 263.0
MMS3_k127_3390509_4 Thioesterase K07107 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008894 262.0
MMS3_k127_3390509_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001302 249.0
MMS3_k127_3398191_0 DNA polymerase alpha chain like domain K02337 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1292.0
MMS3_k127_3398191_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 4.383e-218 683.0
MMS3_k127_3398191_2 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 593.0
MMS3_k127_3398191_3 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 504.0
MMS3_k127_3398191_4 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005478 275.0
MMS3_k127_3398191_5 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000008529 237.0
MMS3_k127_3398191_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000001116 137.0
MMS3_k127_3398191_7 - - - - 0.00004045 52.0
MMS3_k127_3412041_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.344e-236 739.0
MMS3_k127_3412041_1 PAS PAC domain-containing protein - - - 6.329e-221 711.0
MMS3_k127_3412041_2 reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 472.0
MMS3_k127_3412041_3 Cupin domain - - - 0.000000000000000000000000123 111.0
MMS3_k127_3412041_4 COG1925 Phosphotransferase system, HPr-related proteins K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.0000000000000000000006735 99.0
MMS3_k127_3412041_5 PTS system fructose IIA component K02793 - 2.7.1.191 0.0002798 43.0
MMS3_k127_3416958_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.313e-257 801.0
MMS3_k127_3416958_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.049e-223 705.0
MMS3_k127_3416958_2 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 451.0
MMS3_k127_3416958_3 NnrS protein K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 370.0
MMS3_k127_3416958_4 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 357.0
MMS3_k127_3416958_5 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 352.0
MMS3_k127_3416958_6 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000001592 271.0
MMS3_k127_3416958_7 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003596 241.0
MMS3_k127_3416958_8 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004141 244.0
MMS3_k127_3440839_0 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 512.0
MMS3_k127_3440839_1 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 437.0
MMS3_k127_3440839_2 Lysophospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 313.0
MMS3_k127_3440839_3 Uracil-DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000102 274.0
MMS3_k127_3450155_0 Amidohydrolase family - - - 1.877e-217 692.0
MMS3_k127_3450155_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 511.0
MMS3_k127_3450155_2 Gram-negative porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003807 258.0
MMS3_k127_3450155_3 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000000003845 210.0
MMS3_k127_3450155_4 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000001467 176.0
MMS3_k127_3451886_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 8.549e-292 925.0
MMS3_k127_3451886_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 406.0
MMS3_k127_3451886_2 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 325.0
MMS3_k127_3451886_3 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000001237 216.0
MMS3_k127_3465989_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 580.0
MMS3_k127_3465989_1 Holliday junction DNA helicase ruvB C-terminus K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 494.0
MMS3_k127_3465989_10 thioesterase K07107 - - 0.000000000000000000000000000000000000132 148.0
MMS3_k127_3465989_11 DoxX K15977 - - 0.0000000000000000000005424 98.0
MMS3_k127_3465989_12 FtsH Extracellular K03798 - - 0.000000000000000000002918 98.0
MMS3_k127_3465989_13 Cell division and transport-associated protein TolA - - - 0.0000000000003324 81.0
MMS3_k127_3465989_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 375.0
MMS3_k127_3465989_3 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 335.0
MMS3_k127_3465989_4 COG0811 Biopolymer transport proteins K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 301.0
MMS3_k127_3465989_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000003682 210.0
MMS3_k127_3465989_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000002343 212.0
MMS3_k127_3465989_7 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000001977 184.0
MMS3_k127_3465989_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000003641 175.0
MMS3_k127_3465989_9 Biopolymer transport protein K03559,K03560 - - 0.0000000000000000000000000000000000000000004899 163.0
MMS3_k127_3486720_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1034.0
MMS3_k127_3532426_0 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 555.0
MMS3_k127_3532426_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 516.0
MMS3_k127_3532426_2 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 449.0
MMS3_k127_3532426_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 445.0
MMS3_k127_3532426_4 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 424.0
MMS3_k127_3532426_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 294.0
MMS3_k127_3534325_0 Polysaccharide biosynthesis protein K13013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 621.0
MMS3_k127_3534325_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 295.0
MMS3_k127_3534325_2 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851,K13007 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 295.0
MMS3_k127_3534325_3 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000001041 209.0
MMS3_k127_3534325_4 O-Antigen ligase - - - 0.0000000000000000000000000000005065 137.0
MMS3_k127_3548394_0 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 398.0
MMS3_k127_3548394_1 enoyl-CoA hydratase K01692,K05605 - 3.1.2.4,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 338.0
MMS3_k127_3548394_2 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000001335 218.0
MMS3_k127_3548394_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000006257 190.0
MMS3_k127_3548394_4 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.0000000000000000000000000000000001358 132.0
MMS3_k127_3548394_5 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000004715 107.0
MMS3_k127_3583303_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 552.0
MMS3_k127_3583303_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 541.0
MMS3_k127_3583303_10 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 310.0
MMS3_k127_3583303_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001445 279.0
MMS3_k127_3583303_12 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000001054 259.0
MMS3_k127_3583303_13 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000517 229.0
MMS3_k127_3583303_14 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000002829 97.0
MMS3_k127_3583303_15 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000003369 68.0
MMS3_k127_3583303_2 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 417.0
MMS3_k127_3583303_3 signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 381.0
MMS3_k127_3583303_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 376.0
MMS3_k127_3583303_5 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 346.0
MMS3_k127_3583303_6 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 334.0
MMS3_k127_3583303_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 331.0
MMS3_k127_3583303_8 phosphate regulon transcriptional regulatory protein PhoB K07657,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 322.0
MMS3_k127_3583303_9 DnaJ C terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007232 317.0
MMS3_k127_3604281_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 398.0
MMS3_k127_3604281_1 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 361.0
MMS3_k127_3604281_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 336.0
MMS3_k127_3604281_3 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 312.0
MMS3_k127_3604281_4 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004799 244.0
MMS3_k127_3604281_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000000000000000000001365 169.0
MMS3_k127_3604281_6 PrpF protein K09788 - - 0.00000000000000000000000000000007278 130.0
MMS3_k127_3649126_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 9.04e-228 717.0
MMS3_k127_3649126_1 Aldo/keto reductase family K05882 - 1.1.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 527.0
MMS3_k127_3649126_2 CYTH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 314.0
MMS3_k127_3649126_3 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04101,K05713 - 1.13.11.16,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008708 275.0
MMS3_k127_3649126_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000002079 209.0
MMS3_k127_3649126_5 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.00000000002129 67.0
MMS3_k127_367168_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.778e-253 791.0
MMS3_k127_367168_1 Rod shape-determining protein MreB K03569 - - 6.94e-197 616.0
MMS3_k127_367168_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 415.0
MMS3_k127_367168_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000001153 235.0
MMS3_k127_367168_4 shape-determining protein K03571 - - 0.0000000001513 63.0
MMS3_k127_374723_0 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 307.0
MMS3_k127_374723_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001997 279.0
MMS3_k127_374723_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000002088 229.0
MMS3_k127_374723_3 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000005974 185.0
MMS3_k127_374723_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000812 162.0
MMS3_k127_374723_5 - - - - 0.00000000000000000000008991 99.0
MMS3_k127_374723_7 membrane - - - 0.0000000001121 70.0
MMS3_k127_3792197_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 601.0
MMS3_k127_3792197_1 lactate/malate dehydrogenase, NAD binding domain K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 508.0
MMS3_k127_3792197_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 484.0
MMS3_k127_3792197_3 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000001654 170.0
MMS3_k127_3792197_4 COG1012 NAD-dependent aldehyde dehydrogenases K00140 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896 1.2.1.18,1.2.1.27 0.000000000000000000000000002473 114.0
MMS3_k127_3807743_0 Belongs to the enoyl-CoA hydratase isomerase family K08299 - 4.2.1.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 454.0
MMS3_k127_3807743_1 Phage plasmid primase P4 family K06919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003929 275.0
MMS3_k127_3807743_2 CoA binding domain K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002642 270.0
MMS3_k127_3807743_3 e3 binding domain K00627 - 2.3.1.12 0.00000000000000000000000002805 109.0
MMS3_k127_3807743_4 Phosphopantetheine attachment site - - - 0.000000000000000000001114 96.0
MMS3_k127_3810746_0 Belongs to the peptidase S41A family - - - 0.000000000000000000000000000000000000000002005 170.0
MMS3_k127_3810746_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000001975 67.0
MMS3_k127_3820865_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 GO:0003674,GO:0003824,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044464,GO:0046487,GO:0046912,GO:0071704 2.3.3.9 2.796e-253 792.0
MMS3_k127_3820865_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 457.0
MMS3_k127_3820865_2 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000001619 218.0
MMS3_k127_3820865_3 CHAP domain - - - 0.000000000000000000000000000000004355 134.0
MMS3_k127_3820865_4 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000007703 111.0
MMS3_k127_3820865_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000002119 72.0
MMS3_k127_3829808_0 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 1.049e-214 672.0
MMS3_k127_3829808_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000001052 196.0
MMS3_k127_3829808_2 TIGRFAM CRISPR-associated protein - - - 0.0000000000000000000000000000000000000000000000000000003393 200.0
MMS3_k127_3829808_3 - - - - 0.0000000002751 70.0
MMS3_k127_3847048_0 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032,K13896 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0015833,GO:0015893,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035672,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042884,GO:0042886,GO:0042891,GO:0043167,GO:0043168,GO:0043492,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 1.139e-222 708.0
MMS3_k127_3847048_1 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 1.583e-216 688.0
MMS3_k127_3847048_2 ABC-type oligopeptide transport system, periplasmic component K02035,K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 619.0
MMS3_k127_3847048_3 transport system, permease component K13895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 557.0
MMS3_k127_3847048_4 transport system, permease component K13894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 516.0
MMS3_k127_3847048_5 Cytosol aminopeptidase family, catalytic domain K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 371.0
MMS3_k127_3847048_6 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.00000000000000000000000000000000000000000000000000008691 189.0
MMS3_k127_3880783_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 4.539e-281 881.0
MMS3_k127_3880783_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000005491 91.0
MMS3_k127_3880909_0 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 429.0
MMS3_k127_3880909_1 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 396.0
MMS3_k127_3880909_2 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 370.0
MMS3_k127_3880909_3 Protein conserved in bacteria K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 326.0
MMS3_k127_3880909_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000003962 262.0
MMS3_k127_3880909_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01450,K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 0.0000000000000000000000000000000005323 134.0
MMS3_k127_3880909_6 Hypoxia induced protein conserved region - - - 0.000000001128 61.0
MMS3_k127_3880948_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.442e-276 856.0
MMS3_k127_3880948_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.115e-216 678.0
MMS3_k127_3880948_10 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 325.0
MMS3_k127_3880948_11 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 283.0
MMS3_k127_3880948_12 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 280.0
MMS3_k127_3880948_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008762 281.0
MMS3_k127_3880948_14 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006784 249.0
MMS3_k127_3880948_15 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000001412 244.0
MMS3_k127_3880948_16 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000004709 239.0
MMS3_k127_3880948_17 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000001699 231.0
MMS3_k127_3880948_18 Ribosomal protein L14p/L23e K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002765 218.0
MMS3_k127_3880948_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000005827 215.0
MMS3_k127_3880948_2 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 1.686e-208 662.0
MMS3_k127_3880948_20 structural constituent of ribosome K02879 - - 0.00000000000000000000000000000000000000000000000000000000005376 207.0
MMS3_k127_3880948_21 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000452 203.0
MMS3_k127_3880948_22 binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000000000000598 202.0
MMS3_k127_3880948_23 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000000006063 196.0
MMS3_k127_3880948_24 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000007959 196.0
MMS3_k127_3880948_25 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000001226 177.0
MMS3_k127_3880948_26 COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.00000000000000000000000000000000000000000000000137 186.0
MMS3_k127_3880948_27 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000001096 173.0
MMS3_k127_3880948_28 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000005108 160.0
MMS3_k127_3880948_29 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000001141 151.0
MMS3_k127_3880948_3 propionyl-CoA carboxylase K01965 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 6.4.1.3 1.981e-199 630.0
MMS3_k127_3880948_30 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000001106 151.0
MMS3_k127_3880948_31 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000001841 141.0
MMS3_k127_3880948_32 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000009662 131.0
MMS3_k127_3880948_33 Ribosomal protein L30 K02907 - - 0.0000000000000000000193 93.0
MMS3_k127_3880948_34 Ribosomal L29 protein K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000007957 85.0
MMS3_k127_3880948_35 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000001308 76.0
MMS3_k127_3880948_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 539.0
MMS3_k127_3880948_5 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 475.0
MMS3_k127_3880948_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 450.0
MMS3_k127_3880948_7 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 386.0
MMS3_k127_3880948_8 AsmA family K07289,K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009172 381.0
MMS3_k127_3880948_9 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 354.0
MMS3_k127_3883056_0 malic enzyme K00029 - 1.1.1.40 0.0 1057.0
MMS3_k127_3883056_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000005329 209.0
MMS3_k127_3883056_2 (Fe-S) oxidoreductase K18928 - - 0.00000000006576 63.0
MMS3_k127_3892650_0 PFAM AMP-dependent synthetase and ligase K04116 - - 2.955e-199 635.0
MMS3_k127_3892650_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 2.982e-194 621.0
MMS3_k127_3892650_10 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000003742 196.0
MMS3_k127_3892650_11 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000588 169.0
MMS3_k127_3892650_12 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000000000000000003803 162.0
MMS3_k127_3892650_13 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000006005 153.0
MMS3_k127_3892650_14 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000001634 138.0
MMS3_k127_3892650_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 500.0
MMS3_k127_3892650_3 Zinc-binding dehydrogenase K00001,K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 397.0
MMS3_k127_3892650_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 393.0
MMS3_k127_3892650_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 341.0
MMS3_k127_3892650_6 KR domain K07535 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 316.0
MMS3_k127_3892650_7 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003632 284.0
MMS3_k127_3892650_8 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000001835 239.0
MMS3_k127_3892650_9 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000003525 232.0
MMS3_k127_3920340_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 321.0
MMS3_k127_3920340_1 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000054 212.0
MMS3_k127_3920340_2 Protein of unknown function (DUF4238) - - - 0.00000000000000000000000000000009223 134.0
MMS3_k127_3920340_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000005427 98.0
MMS3_k127_3953703_0 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 1.706e-224 704.0
MMS3_k127_3953703_1 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 599.0
MMS3_k127_3953703_2 Protein of unknown function, DUF488 - - - 0.000000000000000000006551 93.0
MMS3_k127_3954980_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 3.413e-285 887.0
MMS3_k127_3954980_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 392.0
MMS3_k127_3954980_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 359.0
MMS3_k127_3954980_3 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 299.0
MMS3_k127_3954980_4 Acetolactate synthase small K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000001924 209.0
MMS3_k127_3957795_0 Belongs to the UbiD family K03182 - 4.1.1.98 6.043e-281 868.0
MMS3_k127_3957795_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 1.198e-267 832.0
MMS3_k127_3957795_10 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179,K06125 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 363.0
MMS3_k127_3957795_11 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 333.0
MMS3_k127_3957795_12 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 322.0
MMS3_k127_3957795_13 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 302.0
MMS3_k127_3957795_14 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 289.0
MMS3_k127_3957795_15 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003868 266.0
MMS3_k127_3957795_16 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000002334 249.0
MMS3_k127_3957795_17 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000002824 226.0
MMS3_k127_3957795_18 Thioredoxin - - - 0.0000000000000000000000000000000000000000000001131 177.0
MMS3_k127_3957795_19 - - - - 0.000000000000000000000000000000001157 139.0
MMS3_k127_3957795_2 Required for chromosome condensation and partitioning K03529 - - 1.926e-264 854.0
MMS3_k127_3957795_20 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000001101 120.0
MMS3_k127_3957795_21 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000003147 113.0
MMS3_k127_3957795_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000002394 98.0
MMS3_k127_3957795_23 Protein of unknown function (DUF721) - - - 0.00000000000000000005823 98.0
MMS3_k127_3957795_24 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000007885 68.0
MMS3_k127_3957795_3 Putative modulator of DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 2.326e-213 672.0
MMS3_k127_3957795_4 glutamate--cysteine ligase K01919 - 6.3.2.2 4.669e-208 655.0
MMS3_k127_3957795_5 DNA methylase K13581 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 529.0
MMS3_k127_3957795_6 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 447.0
MMS3_k127_3957795_7 COG1194 A G-specific DNA glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 426.0
MMS3_k127_3957795_8 Cytochrome c oxidase subunit III K02276 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 388.0
MMS3_k127_3957795_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 385.0
MMS3_k127_3962111_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 9.863e-295 919.0
MMS3_k127_3962111_1 Sigma-54 interaction domain K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 607.0
MMS3_k127_3962111_2 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 314.0
MMS3_k127_3962111_3 Flagellar GTP-binding protein K02404 - - 0.00000000000000000000000000000000000000000000000000000000000002195 227.0
MMS3_k127_3962111_4 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000004376 203.0
MMS3_k127_3962111_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000001878 141.0
MMS3_k127_3962111_6 Flagellar assembly protein FliH K02411 - - 0.000000000000000000000002283 111.0
MMS3_k127_3995137_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 7.709e-212 666.0
MMS3_k127_3995137_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 481.0
MMS3_k127_3995137_2 COG2867 Oligoketide cyclase lipid transport protein K18588 - - 0.00000000000000000000000000000000000000000000000000000000000001325 220.0
MMS3_k127_3995137_3 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000008811 174.0
MMS3_k127_3995137_4 CAAX protease self-immunity - - - 0.00000000000008827 81.0
MMS3_k127_401855_0 Hsp70 protein K04043 - - 5.81e-318 983.0
MMS3_k127_401855_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 532.0
MMS3_k127_401855_2 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 423.0
MMS3_k127_401855_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000002116 152.0
MMS3_k127_4085293_0 Terminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 546.0
MMS3_k127_4085293_1 D5 N terminal like K06919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 459.0
MMS3_k127_4085293_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000002637 131.0
MMS3_k127_4085293_3 Bifunctional DNA primase/polymerase, N-terminal - - - 0.000000000000000000000277 101.0
MMS3_k127_4085293_4 - - - - 0.000000000000000002116 93.0
MMS3_k127_4096542_0 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 1.289e-205 657.0
MMS3_k127_4096542_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 353.0
MMS3_k127_4096542_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000006588 241.0
MMS3_k127_4096542_3 Periplasmic binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000004137 215.0
MMS3_k127_4103821_0 signal transduction histidine kinase K13587 - 2.7.13.3 5.888e-231 737.0
MMS3_k127_4103821_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.661e-220 689.0
MMS3_k127_4103821_10 - - - - 0.0000000000000000000000000000008343 124.0
MMS3_k127_4103821_11 invasion associated locus B - - - 0.00000000000000000000000000001909 124.0
MMS3_k127_4103821_12 YGGT family K02221 - - 0.0000000000000000000000000001493 120.0
MMS3_k127_4103821_13 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000229 112.0
MMS3_k127_4103821_14 Role in flagellar biosynthesis K02420 - - 0.000000000000000000003779 95.0
MMS3_k127_4103821_15 Major facilitator superfamily MFS_1 K08178 - - 0.00000000000000000003933 105.0
MMS3_k127_4103821_16 Belongs to the UPF0235 family K09131 - - 0.0000000000000001529 83.0
MMS3_k127_4103821_17 Flagellar hook-basal body K02408 - - 0.00000001672 60.0
MMS3_k127_4103821_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 523.0
MMS3_k127_4103821_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 398.0
MMS3_k127_4103821_4 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 340.0
MMS3_k127_4103821_5 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 329.0
MMS3_k127_4103821_6 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 315.0
MMS3_k127_4103821_7 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 307.0
MMS3_k127_4103821_8 Bacterial export proteins, family 1 K02421 - - 0.00000000000000000000000000000000000000000000000000000000000008509 221.0
MMS3_k127_4103821_9 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000001453 162.0
MMS3_k127_4110798_0 COG4584 Transposase and inactivated derivatives - - - 2.935e-275 853.0
MMS3_k127_4110798_1 IstB-like ATP binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 440.0
MMS3_k127_4110798_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00000000000005738 73.0
MMS3_k127_4125941_0 DNA helicase K03657 - 3.6.4.12 1.109e-209 664.0
MMS3_k127_4125941_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 503.0
MMS3_k127_4125941_2 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008495 278.0
MMS3_k127_4203285_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 400.0
MMS3_k127_4203285_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 394.0
MMS3_k127_4203285_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 357.0
MMS3_k127_4203285_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 301.0
MMS3_k127_4203285_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000008285 246.0
MMS3_k127_4203285_5 Phosphatidylethanolamine-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001611 243.0
MMS3_k127_4203285_6 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000001873 202.0
MMS3_k127_4203285_7 DNA polymerase III alpha subunit K02337 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.00000000008097 65.0
MMS3_k127_421751_0 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 475.0
MMS3_k127_421751_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 406.0
MMS3_k127_421751_2 FAD binding domain K07077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003222 273.0
MMS3_k127_421751_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000001284 202.0
MMS3_k127_421751_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000002344 98.0
MMS3_k127_4220884_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1301.0
MMS3_k127_4220884_1 Molecular chaperone. Has ATPase activity K04079 - - 3.974e-220 695.0
MMS3_k127_4220884_2 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 356.0
MMS3_k127_4220884_3 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000000000001964 180.0
MMS3_k127_4250538_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 1.243e-275 870.0
MMS3_k127_4250538_1 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000003806 251.0
MMS3_k127_4250538_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000002654 154.0
MMS3_k127_4267165_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007078 276.0
MMS3_k127_4267165_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000005326 226.0
MMS3_k127_4267165_2 Protein of unknown function (DUF1244) K09948 - - 0.000000000000000000000000000000000000001721 151.0
MMS3_k127_4267165_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000032 115.0
MMS3_k127_4267165_4 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000003103 113.0
MMS3_k127_4267165_5 - - - - 0.00000000126 66.0
MMS3_k127_4298790_0 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 298.0
MMS3_k127_4298790_1 KR domain K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000003148 175.0
MMS3_k127_456400_0 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1077.0
MMS3_k127_46532_0 COG0480 Translation elongation factors (GTPases) K02355 - - 3.151e-242 766.0
MMS3_k127_46532_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 417.0
MMS3_k127_46532_11 Protein of unknown function (DUF805) - - - 0.0000000000000000000383 99.0
MMS3_k127_46532_13 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000002051 57.0
MMS3_k127_46532_14 - - - - 0.000004053 57.0
MMS3_k127_46532_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 406.0
MMS3_k127_46532_3 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 322.0
MMS3_k127_46532_4 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 300.0
MMS3_k127_46532_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007879 263.0
MMS3_k127_46532_6 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000003573 205.0
MMS3_k127_46532_7 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000008242 199.0
MMS3_k127_46532_8 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000004232 159.0
MMS3_k127_46532_9 Cache domain - - - 0.0000000000000000000000000000000707 131.0
MMS3_k127_471301_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.369e-225 706.0
MMS3_k127_471301_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 556.0
MMS3_k127_471301_2 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 331.0
MMS3_k127_471301_3 membrane protein, required for colicin V production K03558 - - 0.000000000000000000000000000000000006408 145.0
MMS3_k127_471301_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000487 103.0
MMS3_k127_499655_0 Branched-chain amino acid transport system / permease component K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 429.0
MMS3_k127_499655_1 ABC transporter K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 341.0
MMS3_k127_499655_2 ATPases associated with a variety of cellular activities K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 319.0
MMS3_k127_499655_3 Branched-chain amino acid transport system / permease component K11960 - - 0.000000000000000000000000000000005866 129.0
MMS3_k127_499655_4 UreD urease accessory protein K03190 - - 0.000000000000000000004121 98.0
MMS3_k127_508127_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.197e-307 967.0
MMS3_k127_508127_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.394e-274 854.0
MMS3_k127_508127_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000006098 146.0
MMS3_k127_508127_2 Participates in both transcription termination and antitermination K02600 - - 2.092e-234 738.0
MMS3_k127_508127_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.618e-197 619.0
MMS3_k127_508127_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 317.0
MMS3_k127_508127_5 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000001673 233.0
MMS3_k127_508127_6 transcriptional - - - 0.00000000000000000000000000000000000000000000000003333 181.0
MMS3_k127_508127_7 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000008237 173.0
MMS3_k127_508127_8 Protein of unknown function (DUF448) K07742 - - 0.000000000000000000000000000000000000000000005243 171.0
MMS3_k127_508127_9 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000002476 143.0
MMS3_k127_51756_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1214.0
MMS3_k127_51756_1 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.459e-305 954.0
MMS3_k127_51756_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 302.0
MMS3_k127_51756_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 293.0
MMS3_k127_51756_12 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000005129 266.0
MMS3_k127_51756_13 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001394 264.0
MMS3_k127_51756_14 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000217 252.0
MMS3_k127_51756_15 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000009997 229.0
MMS3_k127_51756_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000002613 171.0
MMS3_k127_51756_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000001823 165.0
MMS3_k127_51756_18 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000000003375 139.0
MMS3_k127_51756_2 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 6.917e-268 838.0
MMS3_k127_51756_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 2.564e-244 758.0
MMS3_k127_51756_4 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 3.937e-220 692.0
MMS3_k127_51756_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 4.132e-214 668.0
MMS3_k127_51756_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.6e-210 659.0
MMS3_k127_51756_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 547.0
MMS3_k127_51756_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 541.0
MMS3_k127_51756_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 302.0
MMS3_k127_56169_0 GTP-binding protein TypA K06207 - - 2.748e-290 902.0
MMS3_k127_56169_1 Class II Aldolase and Adducin N-terminal domain - - - 2.981e-276 865.0
MMS3_k127_56169_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003549 267.0
MMS3_k127_56169_11 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002819 264.0
MMS3_k127_56169_12 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000001424 186.0
MMS3_k127_56169_13 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000006624 85.0
MMS3_k127_56169_14 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.0000000000003424 70.0
MMS3_k127_56169_16 Heavy-metal resistance - - - 0.000005234 54.0
MMS3_k127_56169_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 7.343e-242 756.0
MMS3_k127_56169_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 510.0
MMS3_k127_56169_4 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 422.0
MMS3_k127_56169_5 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 406.0
MMS3_k127_56169_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 397.0
MMS3_k127_56169_7 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 370.0
MMS3_k127_56169_8 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 370.0
MMS3_k127_56169_9 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 302.0
MMS3_k127_565008_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.634e-207 651.0
MMS3_k127_565008_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007046 596.0
MMS3_k127_565008_10 PFAM secretion protein HlyD family protein K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 308.0
MMS3_k127_565008_11 Transcriptional regulatory protein, C terminal K14981 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 299.0
MMS3_k127_565008_12 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002238 255.0
MMS3_k127_565008_13 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000001001 252.0
MMS3_k127_565008_14 COG0698 Ribose 5-phosphate isomerase RpiB K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000003554 196.0
MMS3_k127_565008_15 ROS/MUCR transcriptional regulator protein - - - 0.00000000000000000000000000000000000000000000000004574 182.0
MMS3_k127_565008_16 Nitroreductase family - GO:0000166,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000981 183.0
MMS3_k127_565008_17 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000778 162.0
MMS3_k127_565008_18 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000004482 162.0
MMS3_k127_565008_19 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000001656 132.0
MMS3_k127_565008_2 Belongs to the thiolase family K00626,K00632,K07823 - 2.3.1.16,2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 587.0
MMS3_k127_565008_20 - - - - 0.0000000000000000000000000009682 123.0
MMS3_k127_565008_21 FOG TPR repeat, SEL1 subfamily K07126,K13582 - - 0.00000000000000000002433 103.0
MMS3_k127_565008_22 - - - - 0.00000000000000001013 87.0
MMS3_k127_565008_23 - - - - 0.000000009394 63.0
MMS3_k127_565008_24 - - - - 0.00000002078 62.0
MMS3_k127_565008_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858,K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 526.0
MMS3_k127_565008_4 PFAM Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 507.0
MMS3_k127_565008_5 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 466.0
MMS3_k127_565008_6 Histidine kinase-like ATPases K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 468.0
MMS3_k127_565008_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 418.0
MMS3_k127_565008_8 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 313.0
MMS3_k127_565008_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008622 316.0
MMS3_k127_565689_0 PFAM FAD linked oxidase domain protein K00803 - 2.5.1.26 9.037e-222 702.0
MMS3_k127_565689_1 COG1053 Succinate dehydrogenase fumarate reductase, flavoprotein subunit - - - 1.171e-206 660.0
MMS3_k127_565689_2 Domain of unknown function (DUF2520) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 330.0
MMS3_k127_565689_3 Histidine kinase - - - 0.00000000000000000000000000000002683 129.0
MMS3_k127_565689_4 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000008739 127.0
MMS3_k127_565689_5 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000003713 93.0
MMS3_k127_569291_0 COG1737 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 409.0
MMS3_k127_569291_1 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 407.0
MMS3_k127_569291_2 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 359.0
MMS3_k127_569291_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000014 261.0
MMS3_k127_569291_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000005892 128.0
MMS3_k127_574085_0 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 473.0
MMS3_k127_574085_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001322 279.0
MMS3_k127_574085_2 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000195 210.0
MMS3_k127_584927_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 339.0
MMS3_k127_584927_1 SURF1 family K14998 GO:0006996,GO:0007005,GO:0008150,GO:0008535,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0033108,GO:0033617,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.00000000000000000000000000000000000000000000000006827 187.0
MMS3_k127_584927_2 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000000000000000008002 156.0
MMS3_k127_591903_0 Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 546.0
MMS3_k127_591903_1 Cys/Met metabolism PLP-dependent enzyme K01739,K10764 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 528.0
MMS3_k127_591903_10 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000002527 181.0
MMS3_k127_591903_11 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000005345 141.0
MMS3_k127_591903_12 COG1230 Co Zn Cd efflux system component - - - 0.0000000000000000000000000000000007324 142.0
MMS3_k127_591903_13 Regulatory protein ArsR - - - 0.000000000000000000000000000001375 123.0
MMS3_k127_591903_14 - - - - 0.00000000000001022 83.0
MMS3_k127_591903_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 492.0
MMS3_k127_591903_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 406.0
MMS3_k127_591903_4 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 401.0
MMS3_k127_591903_5 COG0859 ADP-heptose LPS heptosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 344.0
MMS3_k127_591903_6 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 308.0
MMS3_k127_591903_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002905 267.0
MMS3_k127_591903_8 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000299 250.0
MMS3_k127_591903_9 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000000001482 202.0
MMS3_k127_597280_0 FAD binding domain K07077 - - 1.351e-217 681.0
MMS3_k127_597280_1 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 410.0
MMS3_k127_597280_2 Phosphatidylethanolamine-binding protein K06910 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000005013 241.0
MMS3_k127_605710_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 409.0
MMS3_k127_605710_1 ABC transporter, ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 347.0
MMS3_k127_605710_2 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000008026 136.0
MMS3_k127_605710_3 OstA-like protein K09774 - - 0.000000000000000000000000000002323 132.0
MMS3_k127_605710_4 O-antigen ligase like membrane protein - - - 0.00000000000000001039 94.0
MMS3_k127_607360_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1015.0
MMS3_k127_607360_1 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 590.0
MMS3_k127_607360_10 Domain of unknown function (DUF1956) - - - 0.00000000000000000000000000000000000000000000000000000001674 205.0
MMS3_k127_607360_11 AcrB/AcrD/AcrF family K18138,K18307 - - 0.0000000000000000000000000000000000000000003754 159.0
MMS3_k127_607360_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 568.0
MMS3_k127_607360_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 467.0
MMS3_k127_607360_4 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 344.0
MMS3_k127_607360_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 306.0
MMS3_k127_607360_6 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 294.0
MMS3_k127_607360_7 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 294.0
MMS3_k127_607360_8 Phenylacetic acid degradation protein PaaY K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005562 257.0
MMS3_k127_607360_9 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000568 228.0
MMS3_k127_655630_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 5.466e-250 788.0
MMS3_k127_655630_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.643e-209 657.0
MMS3_k127_655630_10 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000000118 181.0
MMS3_k127_655630_11 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000001748 175.0
MMS3_k127_655630_12 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000004677 147.0
MMS3_k127_655630_13 protein conserved in bacteria - - - 0.0000000000000000000000000003927 114.0
MMS3_k127_655630_14 TfoX N-terminal domain K07343 - - 0.00000000000000000000844 98.0
MMS3_k127_655630_15 acetyltransferase - - - 0.0000005079 55.0
MMS3_k127_655630_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 609.0
MMS3_k127_655630_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 417.0
MMS3_k127_655630_4 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 355.0
MMS3_k127_655630_5 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 339.0
MMS3_k127_655630_6 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000004313 263.0
MMS3_k127_655630_7 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000001318 228.0
MMS3_k127_655630_8 transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000003393 200.0
MMS3_k127_655630_9 Ferredoxin K04755 - - 0.000000000000000000000000000000000000000000000000006769 183.0
MMS3_k127_659276_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.563e-223 708.0
MMS3_k127_659276_1 Amino acid permease - - - 2.417e-223 716.0
MMS3_k127_659276_10 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 362.0
MMS3_k127_659276_11 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 359.0
MMS3_k127_659276_12 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 357.0
MMS3_k127_659276_13 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 351.0
MMS3_k127_659276_14 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 340.0
MMS3_k127_659276_15 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 331.0
MMS3_k127_659276_16 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
MMS3_k127_659276_17 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000176 291.0
MMS3_k127_659276_18 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001553 280.0
MMS3_k127_659276_19 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000613 274.0
MMS3_k127_659276_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 3.644e-207 660.0
MMS3_k127_659276_20 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004996 251.0
MMS3_k127_659276_21 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003413 248.0
MMS3_k127_659276_22 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000001528 245.0
MMS3_k127_659276_23 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000002267 232.0
MMS3_k127_659276_24 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.000000000000000000000000000000000000000000000000000000000000006472 221.0
MMS3_k127_659276_25 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000306 151.0
MMS3_k127_659276_26 Iron-sulphur cluster biosynthesis K13628,K15724 - - 0.000000000000000000000000000000000000002001 151.0
MMS3_k127_659276_27 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000000003555 124.0
MMS3_k127_659276_28 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000001297 117.0
MMS3_k127_659276_29 Sporulation related domain - - - 0.00000000000000000000000004569 119.0
MMS3_k127_659276_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 575.0
MMS3_k127_659276_30 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000006425 109.0
MMS3_k127_659276_31 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000001001 94.0
MMS3_k127_659276_32 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0003674,GO:0005215 - 0.00000000000005451 74.0
MMS3_k127_659276_33 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000002123 77.0
MMS3_k127_659276_4 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 480.0
MMS3_k127_659276_5 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 452.0
MMS3_k127_659276_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 443.0
MMS3_k127_659276_7 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 456.0
MMS3_k127_659276_8 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 413.0
MMS3_k127_659276_9 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082 366.0
MMS3_k127_66904_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1305.0
MMS3_k127_66904_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1050.0
MMS3_k127_66904_2 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0 1042.0
MMS3_k127_66904_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 584.0
MMS3_k127_66904_4 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001362 284.0
MMS3_k127_66904_5 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000000000002032 246.0
MMS3_k127_66904_6 Domain of unknown function (DUF4167) - - - 0.0000000000000000000006846 100.0
MMS3_k127_66904_7 Peptidase family M23 - - - 0.000000000000000000001403 96.0
MMS3_k127_671182_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 473.0
MMS3_k127_671182_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 407.0
MMS3_k127_671182_2 Pyridoxal-phosphate dependent enzyme K01754 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006520,GO:0006563,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0016853,GO:0016854,GO:0016855,GO:0017144,GO:0018249,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0030378,GO:0030848,GO:0036094,GO:0036211,GO:0036361,GO:0042219,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046416,GO:0046437,GO:0046872,GO:0047661,GO:0048037,GO:0050662,GO:0070178,GO:0070179,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 380.0
MMS3_k127_671182_3 Major Facilitator Superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002445 266.0
MMS3_k127_671182_4 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006965 261.0
MMS3_k127_671182_5 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000007195 183.0
MMS3_k127_671182_6 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000739 166.0
MMS3_k127_677159_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 1.377e-196 620.0
MMS3_k127_677159_1 alpha/beta hydrolase fold K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 350.0
MMS3_k127_677159_2 Polyhydroxyalkanoate synthesis repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 230.0
MMS3_k127_677159_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000000000002614 165.0
MMS3_k127_677159_4 - - - - 0.00003299 53.0
MMS3_k127_697267_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1070.0
MMS3_k127_697267_1 Prephenate dehydrogenase K00210,K00220,K04517 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 412.0
MMS3_k127_697267_2 transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 388.0
MMS3_k127_697267_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 319.0
MMS3_k127_697267_4 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 297.0
MMS3_k127_697267_6 Uncharacterized protein conserved in bacteria (DUF2125) - - - 0.000000000000000000000003383 116.0
MMS3_k127_702940_0 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 308.0
MMS3_k127_702940_1 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 289.0
MMS3_k127_702940_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 291.0
MMS3_k127_702940_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000002106 190.0
MMS3_k127_702940_4 Gram-negative porin K08720 - - 0.000000000000000000000000000000000000000000000000002018 198.0
MMS3_k127_702940_5 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000007762 173.0
MMS3_k127_702940_6 Gram-negative porin K08720 - - 0.0000000000000000000000000000000000000000003379 175.0
MMS3_k127_702940_7 - - - - 0.00000002345 66.0
MMS3_k127_706218_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 587.0
MMS3_k127_706218_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 371.0
MMS3_k127_706218_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 316.0
MMS3_k127_706218_3 ATPase (AAA K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 301.0
MMS3_k127_706218_4 Phytoene squalene synthetase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000002954 188.0
MMS3_k127_706218_5 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000000002639 160.0
MMS3_k127_706218_6 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000003286 124.0
MMS3_k127_709551_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 1.206e-248 816.0
MMS3_k127_709551_1 Homoserine dehydrogenase, NAD binding domain-containing protein - - - 1.941e-195 621.0
MMS3_k127_709551_10 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 353.0
MMS3_k127_709551_11 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 346.0
MMS3_k127_709551_12 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 332.0
MMS3_k127_709551_13 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 320.0
MMS3_k127_709551_14 biosynthesis protein ThiJ K18199 - 4.2.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001165 276.0
MMS3_k127_709551_15 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.0000000000000000000000006194 109.0
MMS3_k127_709551_16 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.00000004684 57.0
MMS3_k127_709551_18 nitrogen fixation sensor protein fixL K14986 - 2.7.13.3 0.0009133 46.0
MMS3_k127_709551_2 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 563.0
MMS3_k127_709551_3 Surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 559.0
MMS3_k127_709551_4 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 461.0
MMS3_k127_709551_5 6-phosphogluconate dehydrogenase NAD-binding K08319 - 1.1.1.411 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 460.0
MMS3_k127_709551_6 RNA polymerase sigma K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 452.0
MMS3_k127_709551_7 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 397.0
MMS3_k127_709551_8 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 384.0
MMS3_k127_709551_9 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 355.0
MMS3_k127_711163_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1206.0
MMS3_k127_711163_1 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 2.528e-212 664.0
MMS3_k127_711163_2 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 534.0
MMS3_k127_711163_3 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 362.0
MMS3_k127_711163_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002348 263.0
MMS3_k127_711163_5 - - - - 0.0001385 53.0
MMS3_k127_71922_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1646.0
MMS3_k127_71922_1 Rhomboid family K19225 - 3.4.21.105 0.000000000000001707 79.0
MMS3_k127_71922_2 Antibiotic biosynthesis monooxygenase - - - 0.0000001246 53.0
MMS3_k127_720228_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.607e-226 707.0
MMS3_k127_720228_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.876e-199 630.0
MMS3_k127_720228_2 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007583 602.0
MMS3_k127_720228_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 481.0
MMS3_k127_720228_4 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 319.0
MMS3_k127_720228_5 (LPS) heptosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 301.0
MMS3_k127_720228_6 Competence protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004642 288.0
MMS3_k127_720228_7 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000128 264.0
MMS3_k127_720228_8 - - - - 0.0000000000000000000000007226 111.0
MMS3_k127_73951_0 dihydroxy-acid dehydratase activity K01687 - 4.2.1.9 8e-323 995.0
MMS3_k127_73951_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 349.0
MMS3_k127_73951_2 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 297.0
MMS3_k127_73951_3 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000006926 197.0
MMS3_k127_74497_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1236.0
MMS3_k127_74497_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 4.789e-200 631.0
MMS3_k127_74497_10 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000009775 164.0
MMS3_k127_74497_11 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000007937 131.0
MMS3_k127_74497_12 Protein conserved in bacteria K09991 - - 0.00000000000000000000004207 109.0
MMS3_k127_74497_13 Gram-negative porin - - - 0.0000002889 54.0
MMS3_k127_74497_2 Methyl-transferase K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 490.0
MMS3_k127_74497_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 302.0
MMS3_k127_74497_4 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 291.0
MMS3_k127_74497_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001778 277.0
MMS3_k127_74497_6 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000241 280.0
MMS3_k127_74497_7 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009758 267.0
MMS3_k127_74497_8 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000004458 212.0
MMS3_k127_74497_9 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000186 193.0
MMS3_k127_765127_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 370.0
MMS3_k127_765127_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 335.0
MMS3_k127_765127_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 316.0
MMS3_k127_765127_3 SMP-30/Gluconolaconase/LRE-like region K02352 - - 0.000000000000000000000000000000000000000000000004274 174.0
MMS3_k127_767066_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.965e-214 672.0
MMS3_k127_767066_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 562.0
MMS3_k127_767066_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 287.0
MMS3_k127_767066_11 amino acid K16263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002598 272.0
MMS3_k127_767066_12 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000003224 168.0
MMS3_k127_767066_13 Integral membrane protein (DUF2244) - - - 0.0000000000000000000000000000000000006483 149.0
MMS3_k127_767066_14 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000001119 140.0
MMS3_k127_767066_15 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.000000000000000000000000000000000296 134.0
MMS3_k127_767066_16 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000002992 129.0
MMS3_k127_767066_17 Protein of unknown function (DUF423) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000008892 109.0
MMS3_k127_767066_18 - - - - 0.000000000000000000008181 106.0
MMS3_k127_767066_19 PFAM UspA domain protein - - - 0.0000000000003063 69.0
MMS3_k127_767066_2 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 575.0
MMS3_k127_767066_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 415.0
MMS3_k127_767066_4 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 351.0
MMS3_k127_767066_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 342.0
MMS3_k127_767066_6 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 326.0
MMS3_k127_767066_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 306.0
MMS3_k127_767066_8 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000964 293.0
MMS3_k127_767066_9 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 290.0
MMS3_k127_79941_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K13778 - 6.4.1.5 6.191e-228 717.0
MMS3_k127_79941_1 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 3.816e-198 622.0
MMS3_k127_79941_2 KR domain K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 318.0
MMS3_k127_79941_3 Carbamoyl-phosphate synthase L chain, ATP-binding K13777 - 6.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 293.0
MMS3_k127_79941_4 sh3 domain protein - - - 0.00000000103 61.0
MMS3_k127_80119_0 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.0 1064.0
MMS3_k127_80119_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 567.0
MMS3_k127_80119_2 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 418.0
MMS3_k127_80119_3 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 349.0
MMS3_k127_80119_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001874 279.0
MMS3_k127_80119_5 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003884 263.0
MMS3_k127_80119_6 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000002501 134.0
MMS3_k127_80119_7 Universal stress protein - - - 0.00000000000000000000000000000004712 136.0
MMS3_k127_80119_8 - - - - 0.000000000000000000003433 100.0
MMS3_k127_80119_9 Evidence 4 Homologs of previously reported genes of - - - 0.000000004104 62.0
MMS3_k127_805679_0 Pfam:DUF4102 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 405.0
MMS3_k127_805679_1 Toprim domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001236 246.0
MMS3_k127_805679_2 AAA domain - - - 0.000000000000000000000000000000000000000000000000003017 194.0
MMS3_k127_805679_3 DNA primase K06919 - - 0.000000000002279 72.0
MMS3_k127_805679_4 Transposase - - - 0.0000003203 51.0
MMS3_k127_805679_5 Helix-turn-helix domain - - - 0.000002295 54.0
MMS3_k127_806754_0 COG0436 Aspartate tyrosine aromatic aminotransferase K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 465.0
MMS3_k127_806754_1 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000002758 175.0
MMS3_k127_806754_2 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 0.000000000000000000000001321 113.0
MMS3_k127_84_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1082.0
MMS3_k127_84_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.985e-266 823.0
MMS3_k127_84_10 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 479.0
MMS3_k127_84_11 PEP-utilising enzyme, N-terminal K08484 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 406.0
MMS3_k127_84_12 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 371.0
MMS3_k127_84_13 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 341.0
MMS3_k127_84_14 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 332.0
MMS3_k127_84_15 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 335.0
MMS3_k127_84_16 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001994 278.0
MMS3_k127_84_17 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005531 267.0
MMS3_k127_84_18 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000009066 236.0
MMS3_k127_84_19 COG4942 Membrane-bound metallopeptidase - - - 0.00000000000000000000000000000000000000000000000000001971 205.0
MMS3_k127_84_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.14e-265 825.0
MMS3_k127_84_20 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000002775 176.0
MMS3_k127_84_21 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000001919 152.0
MMS3_k127_84_22 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000002181 121.0
MMS3_k127_84_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.096e-258 816.0
MMS3_k127_84_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 4.094e-216 683.0
MMS3_k127_84_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 3.106e-195 614.0
MMS3_k127_84_6 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 605.0
MMS3_k127_84_7 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 506.0
MMS3_k127_84_8 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 499.0
MMS3_k127_84_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 494.0
MMS3_k127_840580_0 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 510.0
MMS3_k127_840580_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 478.0
MMS3_k127_840580_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 469.0
MMS3_k127_840580_3 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000002344 114.0
MMS3_k127_884547_0 Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 602.0
MMS3_k127_884547_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 502.0
MMS3_k127_900074_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.571e-263 832.0
MMS3_k127_900074_1 Major facilitator superfamily K03449 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 325.0
MMS3_k127_900074_2 protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 330.0
MMS3_k127_900074_3 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003789 271.0
MMS3_k127_900074_4 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000003717 214.0
MMS3_k127_900074_5 Domain of unknown function (DUF4169) - - - 0.0005298 45.0
MMS3_k127_905155_0 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 378.0
MMS3_k127_905155_1 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001138 273.0
MMS3_k127_905155_2 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000001525 171.0
MMS3_k127_934488_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 407.0
MMS3_k127_934488_1 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.00000000000000000000000000000000000000000000000000008251 190.0
MMS3_k127_934488_2 Domain of unknown function (DUF1849) - - - 0.000000000000000000000000000000000000001814 158.0
MMS3_k127_934488_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000003911 152.0
MMS3_k127_946840_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.21e-235 739.0
MMS3_k127_946840_1 Stimulus-sensing domain K14980 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 485.0
MMS3_k127_946840_2 Transcriptional regulatory protein, C terminal K14981 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 348.0
MMS3_k127_946840_3 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 319.0
MMS3_k127_946840_4 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003894 260.0
MMS3_k127_946840_5 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000000007653 196.0
MMS3_k127_946840_6 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 - - 0.000000000000000000000000000000000000000001315 160.0
MMS3_k127_946840_7 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.000000000000000000000000000005988 125.0
MMS3_k127_946840_8 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000002863 105.0
MMS3_k127_946840_9 COG1925 Phosphotransferase system, HPr-related proteins K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.000000000000000000000171 101.0
MMS3_k127_950767_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2135.0
MMS3_k127_950767_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 343.0
MMS3_k127_950767_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 285.0
MMS3_k127_950767_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000001532 226.0
MMS3_k127_950767_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000007544 190.0
MMS3_k127_950767_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000001284 185.0
MMS3_k127_950767_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000001449 83.0
MMS3_k127_950767_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000001308 76.0
MMS3_k127_950767_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000002084 67.0
MMS3_k127_961117_0 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 319.0
MMS3_k127_961117_1 acetyltransferase - - - 0.000000000000000443 83.0
MMS3_k127_961117_2 DEAD-like helicases superfamily K03732,K11927 - 3.6.4.13 0.00009347 49.0
MMS3_k127_986134_0 Enoyl-CoA hydratase/isomerase - - - 4.953e-227 715.0
MMS3_k127_986134_1 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases - - - 1.865e-205 653.0
MMS3_k127_986134_2 mandelate racemase muconate lactonizing K20023 - 4.2.1.156,4.2.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 425.0
MMS3_k127_986134_3 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 352.0
MMS3_k127_986134_4 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000002372 232.0
MMS3_k127_986134_5 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000002944 171.0