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Overview

ID MAG02807
Name MMS3_bin.5
Sample SMP0066
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Gallionellaceae
Genus DATDDB01
Species
Assembly information
Completeness (%) 78.19
Contamination (%) 3.25
GC content (%) 63.0
N50 (bp) 5,963
Genome size (bp) 2,079,943

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2154

Gene name Description KEGG GOs EC E-value Score Sequence
MMS3_k127_1014937_0 metal-dependent phosphohydrolase HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 586.0
MMS3_k127_1014937_1 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000000000000000000009137 196.0
MMS3_k127_1014937_2 Rieske-like [2Fe-2S] domain K15762 - - 0.00000000000000000000000000000000000000000003591 164.0
MMS3_k127_1014937_4 - - - - 0.0001975 48.0
MMS3_k127_1014937_5 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0006972 44.0
MMS3_k127_1018973_0 PFAM cytochrome c, class I K19713 - 1.8.2.2 8.189e-265 831.0
MMS3_k127_1018973_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 558.0
MMS3_k127_1018973_10 DsrE/DsrF-like family K09004 - - 0.000000000007587 74.0
MMS3_k127_1018973_2 PFAM type II secretion system protein E K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 520.0
MMS3_k127_1018973_3 Major Facilitator Superfamily K08227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 494.0
MMS3_k127_1018973_4 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 437.0
MMS3_k127_1018973_5 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 436.0
MMS3_k127_1018973_6 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 400.0
MMS3_k127_1018973_7 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 374.0
MMS3_k127_1018973_8 UPF0056 inner membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002383 261.0
MMS3_k127_1018973_9 - - - - 0.0000000000000000000000000000000000000000000003149 177.0
MMS3_k127_1029792_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000004368 234.0
MMS3_k127_1029792_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000164 215.0
MMS3_k127_1029792_2 heme binding - - - 0.0000008791 57.0
MMS3_k127_1037666_0 Virulence factor membrane-bound polymerase, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 542.0
MMS3_k127_1037666_1 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 475.0
MMS3_k127_1037666_2 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 510.0
MMS3_k127_1037666_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 373.0
MMS3_k127_1037666_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000002416 241.0
MMS3_k127_1037666_5 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000002113 237.0
MMS3_k127_1037666_6 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000002134 182.0
MMS3_k127_1037666_7 Bacterial SH3 domain - - - 0.0000000000000000000000000000000002597 140.0
MMS3_k127_1037666_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000201 131.0
MMS3_k127_1037666_9 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000001121 119.0
MMS3_k127_1053495_0 Belongs to the UPF0061 (SELO) family - - - 1.355e-223 703.0
MMS3_k127_1053495_1 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 314.0
MMS3_k127_1053495_2 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004457 281.0
MMS3_k127_1053495_3 C-terminal domain of CHU protein family K20276 - - 0.000000000000000000000000000000000000000000000000000000000000003956 239.0
MMS3_k127_1053495_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000001764 177.0
MMS3_k127_1053495_6 domain, Protein K02674 - - 0.000000000000000000001541 110.0
MMS3_k127_1084315_0 Putative diguanylate phosphodiesterase - - - 2.419e-268 855.0
MMS3_k127_1084315_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 327.0
MMS3_k127_1084315_2 Belongs to the GST superfamily K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002064 264.0
MMS3_k127_1088606_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 368.0
MMS3_k127_1088606_1 - - - - 0.0000000000000000000000000000000000000000000000622 172.0
MMS3_k127_1088606_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000007412 158.0
MMS3_k127_1094467_0 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 325.0
MMS3_k127_1094467_1 Binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 320.0
MMS3_k127_1094467_2 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000793 292.0
MMS3_k127_1094467_3 Molecular chaperone - - - 0.00000000000000000000000000000000000000000000859 164.0
MMS3_k127_1094467_4 Belongs to the BolA IbaG family K05527,K22066 - - 0.000000000000000000000000000000001253 133.0
MMS3_k127_1120899_0 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 506.0
MMS3_k127_1120899_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 355.0
MMS3_k127_1120899_2 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 338.0
MMS3_k127_1120899_3 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000001004 244.0
MMS3_k127_1120899_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000004495 128.0
MMS3_k127_1120899_5 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.00000000000000000004794 94.0
MMS3_k127_1121493_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 537.0
MMS3_k127_1121493_1 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000000003252 154.0
MMS3_k127_1121493_2 TIGRFAM TonB family protein K03646 - - 0.000000000000000000000000000005223 128.0
MMS3_k127_1127098_0 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 418.0
MMS3_k127_1127098_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000004027 235.0
MMS3_k127_1127098_2 DsrC like protein - - - 0.00000000000000000000000000000000000000007501 153.0
MMS3_k127_1127098_3 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000008765 145.0
MMS3_k127_1127098_4 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000006323 114.0
MMS3_k127_1132066_0 PFAM type II secretion system protein E K02670 - - 3.007e-208 651.0
MMS3_k127_1132066_1 PFAM type II secretion system protein E K02669,K12203 - - 1.642e-202 633.0
MMS3_k127_1132066_2 THUMP K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 595.0
MMS3_k127_1132066_3 PFAM ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 379.0
MMS3_k127_1132066_4 PFAM ABC transporter related K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001542 279.0
MMS3_k127_1132066_5 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000000383 187.0
MMS3_k127_1132066_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000001688 70.0
MMS3_k127_1133847_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1046.0
MMS3_k127_1133847_1 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002986 275.0
MMS3_k127_1133847_2 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000000002271 153.0
MMS3_k127_1133847_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000004149 85.0
MMS3_k127_1133847_4 - - - - 0.000000000000000004216 87.0
MMS3_k127_115809_0 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 467.0
MMS3_k127_115809_1 - - - - 0.000000000005811 68.0
MMS3_k127_1166261_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 1.924e-243 761.0
MMS3_k127_1166261_1 Oxidoreductase FAD-binding domain protein K00523,K18248 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 611.0
MMS3_k127_1166261_2 PFAM Glycosyl transferase, family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 359.0
MMS3_k127_118078_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 1.01e-317 990.0
MMS3_k127_118078_1 Aminotransferase class-III K01845 - 5.4.3.8 2.706e-240 746.0
MMS3_k127_118078_10 Fimbrial assembly protein (PilN) K02663 - - 0.00000000000000000000000000000000000000000000244 173.0
MMS3_k127_118078_11 Pilus assembly protein, PilP K02665 - - 0.000000000000000000000000000000000000002499 154.0
MMS3_k127_118078_12 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000000000000000000007836 148.0
MMS3_k127_118078_13 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000001438 50.0
MMS3_k127_118078_2 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 580.0
MMS3_k127_118078_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 533.0
MMS3_k127_118078_4 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 448.0
MMS3_k127_118078_5 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 338.0
MMS3_k127_118078_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 282.0
MMS3_k127_118078_7 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000004727 245.0
MMS3_k127_118078_8 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000005279 230.0
MMS3_k127_118078_9 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000006827 214.0
MMS3_k127_1185122_0 Bacteriophage head to tail connecting protein - - - 4.22e-220 693.0
MMS3_k127_1185122_1 - - - - 0.000000000000000000000000000000000000000000000000003439 188.0
MMS3_k127_1185122_2 - - - - 0.000000000000000000000000000000000000000000000001125 177.0
MMS3_k127_1185122_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000008497 168.0
MMS3_k127_1185122_4 - - - - 0.000000000000000000000000001884 115.0
MMS3_k127_1187624_0 AAA domain K16898 - 3.6.4.12 0.0 1429.0
MMS3_k127_1187624_1 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0 1114.0
MMS3_k127_1187624_2 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 416.0
MMS3_k127_1187624_3 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 309.0
MMS3_k127_1187624_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000002353 195.0
MMS3_k127_1187624_5 SpoIIAA-like - - - 0.0000000000000000000000000000000000000000000000000001601 187.0
MMS3_k127_1190477_0 LysR substrate binding domain K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 475.0
MMS3_k127_1190477_1 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein K00381,K00392 - 1.8.1.2,1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 451.0
MMS3_k127_1190477_2 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 313.0
MMS3_k127_1195118_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 552.0
MMS3_k127_1195118_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 349.0
MMS3_k127_1195118_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 324.0
MMS3_k127_1195118_3 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000009594 148.0
MMS3_k127_1195118_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000007535 122.0
MMS3_k127_1195118_5 TonB C terminal K03832 - - 0.000000000000000002691 93.0
MMS3_k127_1195118_6 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000008977 53.0
MMS3_k127_1198115_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 4.304e-215 681.0
MMS3_k127_1198115_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 471.0
MMS3_k127_1198115_2 PFAM Glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 421.0
MMS3_k127_1198115_3 Small Multidrug Resistance protein - - - 0.0000000000000000000000000000000000000000000000000002526 187.0
MMS3_k127_1198115_4 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000004632 116.0
MMS3_k127_1236835_0 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 579.0
MMS3_k127_1236835_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 580.0
MMS3_k127_1236835_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000002591 222.0
MMS3_k127_1236835_3 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000000000003586 145.0
MMS3_k127_1237529_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.0 1227.0
MMS3_k127_1237529_1 kinase activity - - - 2.515e-201 639.0
MMS3_k127_1237529_2 glycolate oxidase iron-sulfur subunit K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 323.0
MMS3_k127_1237529_3 Transcriptional regulator K13641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 297.0
MMS3_k127_1237529_4 Membrane transport protein K07088 - - 0.00000000000000000000000000000005019 126.0
MMS3_k127_1239322_0 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000004669 184.0
MMS3_k127_1239322_1 Homologues of snake disintegrins - - - 0.00000000000000000001642 103.0
MMS3_k127_1239322_2 - - - - 0.00000000000000000005534 96.0
MMS3_k127_1239322_3 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000289 57.0
MMS3_k127_1239322_4 Pkd domain containing protein - - - 0.00004065 55.0
MMS3_k127_1239322_5 Methyltransferase domain - - - 0.00051 51.0
MMS3_k127_1243699_0 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 490.0
MMS3_k127_1243699_1 Ion channel K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 445.0
MMS3_k127_1243699_2 Phosphorylase superfamily K00772,K03815 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 340.0
MMS3_k127_1243699_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 327.0
MMS3_k127_1243699_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000001343 250.0
MMS3_k127_1243699_5 - - - - 0.00000006874 60.0
MMS3_k127_1255234_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 449.0
MMS3_k127_1255234_1 beta-lactamase domain protein K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 335.0
MMS3_k127_1255234_2 - - - - 0.0000000006843 67.0
MMS3_k127_1255234_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0005536 46.0
MMS3_k127_1262918_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0 1163.0
MMS3_k127_1262918_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0 1049.0
MMS3_k127_1262918_10 antisigma factor binding K04749 - - 0.0000000000000000002252 95.0
MMS3_k127_1262918_11 Histidine kinase-like ATPase domain - - - 0.00000000000000000207 100.0
MMS3_k127_1262918_12 - - - - 0.0002145 49.0
MMS3_k127_1262918_2 Metallopeptidase family M24 K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 467.0
MMS3_k127_1262918_3 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 420.0
MMS3_k127_1262918_4 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 392.0
MMS3_k127_1262918_5 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 320.0
MMS3_k127_1262918_6 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 265.0
MMS3_k127_1262918_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000001934 212.0
MMS3_k127_1262918_8 antisigma factor binding K04749 - - 0.00000000000000000000000001074 114.0
MMS3_k127_1262918_9 C-terminal domain of alpha-glycerophosphate oxidase - - - 0.0000000000000000000000001719 108.0
MMS3_k127_1271183_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 4.483e-279 871.0
MMS3_k127_1271183_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 340.0
MMS3_k127_1271183_2 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.00000000000000000000000000001031 120.0
MMS3_k127_1284035_0 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 525.0
MMS3_k127_1284035_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 516.0
MMS3_k127_1284035_2 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 509.0
MMS3_k127_1284035_3 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 365.0
MMS3_k127_1284035_4 DSBA Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 292.0
MMS3_k127_1284035_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 300.0
MMS3_k127_1284035_6 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003926 248.0
MMS3_k127_1298059_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 7.888e-261 810.0
MMS3_k127_1298059_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 4.002e-237 739.0
MMS3_k127_1298059_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.563e-216 681.0
MMS3_k127_1298059_3 Ammonium Transporter Family K03320,K06580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 394.0
MMS3_k127_1298059_4 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 299.0
MMS3_k127_1314514_0 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 601.0
MMS3_k127_1314514_1 BNR repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 461.0
MMS3_k127_1314514_2 Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 454.0
MMS3_k127_1314514_3 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 326.0
MMS3_k127_1314514_4 - - - - 0.0000000000000000000000000000000000000006072 154.0
MMS3_k127_1314514_5 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000001888 131.0
MMS3_k127_1314514_6 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000001267 113.0
MMS3_k127_1337259_0 Cysteine-rich domain - - - 1.558e-264 817.0
MMS3_k127_1337259_1 Transcriptional regulator, LysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 478.0
MMS3_k127_1337259_10 Protein of unknown function (DUF3501) - - - 0.0000008305 54.0
MMS3_k127_1337259_11 - - - - 0.0005298 45.0
MMS3_k127_1337259_2 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009923 417.0
MMS3_k127_1337259_3 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003107 266.0
MMS3_k127_1337259_4 type 4 fimbrial biogenesis K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000351 237.0
MMS3_k127_1337259_5 Pilus assembly protein PilX - - - 0.0000000000000000000000000000000000000000001083 167.0
MMS3_k127_1337259_6 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000000000000000000000108 167.0
MMS3_k127_1337259_7 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000000000000003665 87.0
MMS3_k127_1337259_8 Neisseria PilC beta-propeller domain K02674 - - 0.000000000000001341 86.0
MMS3_k127_1337259_9 Type II transport protein GspH K08084 - - 0.0000000000003288 76.0
MMS3_k127_135006_0 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 428.0
MMS3_k127_135006_1 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 397.0
MMS3_k127_135006_2 Glycosyl transferases group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 350.0
MMS3_k127_135006_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00001431 55.0
MMS3_k127_135177_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.224e-203 645.0
MMS3_k127_135177_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 438.0
MMS3_k127_135177_2 MraZ protein, putative antitoxin-like K03925 - - 0.00000000000000000000000000000000000001086 145.0
MMS3_k127_135177_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000000000003401 113.0
MMS3_k127_1352161_0 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 443.0
MMS3_k127_1352161_1 PFAM Integrase catalytic region K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 359.0
MMS3_k127_1352161_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 328.0
MMS3_k127_1352161_3 PFAM YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006414 248.0
MMS3_k127_1352161_4 - - - - 0.000000000000000000000000000000000003287 144.0
MMS3_k127_1352161_5 - - - - 0.00000000000000000000000000000001158 132.0
MMS3_k127_1352161_6 Transposase K07483 - - 0.0000000000000000000000000000435 120.0
MMS3_k127_1352161_7 - - - - 0.0000000000000000000005981 105.0
MMS3_k127_1352294_0 Belongs to the glycosyl hydrolase 57 family - - - 9.845e-236 742.0
MMS3_k127_1352294_1 Domain of unknown function (DUF1926) K22451 - 2.4.1.25 8.376e-232 733.0
MMS3_k127_1352294_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 1.841e-214 674.0
MMS3_k127_1352294_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 285.0
MMS3_k127_1352318_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 527.0
MMS3_k127_1352318_1 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 346.0
MMS3_k127_1372995_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.547e-212 679.0
MMS3_k127_1372995_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 509.0
MMS3_k127_1372995_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 332.0
MMS3_k127_1372995_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000000000009739 157.0
MMS3_k127_1381960_0 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 478.0
MMS3_k127_1381960_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 331.0
MMS3_k127_1381960_2 Bacterial SH3 domain homologues K07184 - - 0.0000000000000000000000000000000000000000008473 165.0
MMS3_k127_1381960_3 PFAM YbaK prolyl-tRNA K19055 - - 0.00000000003717 72.0
MMS3_k127_1433062_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18138 - - 0.0 1174.0
MMS3_k127_1433062_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 417.0
MMS3_k127_1433062_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000001881 180.0
MMS3_k127_1433062_3 LysM domain K08307 - - 0.000000000000000000000000000000000000003836 153.0
MMS3_k127_1437555_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 8.108e-264 820.0
MMS3_k127_1437555_1 Two component transcriptional regulator PhoB, winged helix family K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 387.0
MMS3_k127_1437555_3 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000005879 177.0
MMS3_k127_1447580_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 462.0
MMS3_k127_1447580_1 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 328.0
MMS3_k127_1447580_10 - - - - 0.0000000000000000000000000006685 119.0
MMS3_k127_1447580_11 transcriptional regulator - - - 0.000000000000000000000000001173 113.0
MMS3_k127_1447580_12 PFAM NifT FixU family protein K02593 - - 0.00000000000000000000000002923 109.0
MMS3_k127_1447580_13 - - - - 0.0000001457 57.0
MMS3_k127_1447580_2 LRV protein FeS4 cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005111 260.0
MMS3_k127_1447580_3 Nitrogenase cofactor biosynthesis protein NifB K02585 - - 0.00000000000000000000000000000000000000000000000005898 179.0
MMS3_k127_1447580_4 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000009137 144.0
MMS3_k127_1447580_5 Iron-sulphur cluster biosynthesis - - - 0.0000000000000000000000000000000000001486 146.0
MMS3_k127_1447580_6 TIR domain - - - 0.000000000000000000000000000000000007378 141.0
MMS3_k127_1447580_7 NifZ domain K02597 - - 0.00000000000000000000000000000000002586 138.0
MMS3_k127_1447580_8 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000698 136.0
MMS3_k127_1447580_9 PFAM NifZ family protein K02597 - - 0.00000000000000000000000000004237 121.0
MMS3_k127_1453088_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.015e-300 928.0
MMS3_k127_1453088_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 7.482e-227 709.0
MMS3_k127_1453088_2 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 350.0
MMS3_k127_1453088_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000001023 155.0
MMS3_k127_1453088_4 ATP synthase I chain K02116 - - 0.000002056 54.0
MMS3_k127_1463487_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1227.0
MMS3_k127_1463487_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000126 278.0
MMS3_k127_1463487_2 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000003237 138.0
MMS3_k127_1463487_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000005419 57.0
MMS3_k127_1467838_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1360.0
MMS3_k127_1467838_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1267.0
MMS3_k127_1467838_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.016e-249 777.0
MMS3_k127_1467838_3 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 497.0
MMS3_k127_1467838_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 421.0
MMS3_k127_1467838_5 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 432.0
MMS3_k127_1467838_6 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 404.0
MMS3_k127_1467838_7 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 370.0
MMS3_k127_1467838_8 Phosphoesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 322.0
MMS3_k127_1467838_9 ApaG domain K06195 - - 0.000000000000000000000000000000000000000000000000001117 185.0
MMS3_k127_1475246_0 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 466.0
MMS3_k127_1475246_1 FtsJ-like methyltransferase K06968 - 2.1.1.186 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 433.0
MMS3_k127_1475246_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 328.0
MMS3_k127_1475246_3 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000009047 207.0
MMS3_k127_1475246_5 Peptidase family M23 - - - 0.000000000000004068 77.0
MMS3_k127_148605_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 574.0
MMS3_k127_148605_2 Diguanylate cyclase - - - 0.00000000000000000000002128 108.0
MMS3_k127_148605_3 - - - - 0.0000000294 63.0
MMS3_k127_1486669_0 FAD dependent oxidoreductase K00313 - - 3.039e-203 637.0
MMS3_k127_1486669_1 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 291.0
MMS3_k127_1486669_10 - - - - 0.000000000000000000127 93.0
MMS3_k127_1486669_2 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002749 271.0
MMS3_k127_1486669_3 Transcriptional regulator K02019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001448 265.0
MMS3_k127_1486669_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005508 259.0
MMS3_k127_1486669_5 - - - - 0.00000000000000000000000000000000000000000000000000000000003377 210.0
MMS3_k127_1486669_6 Could be a 3Fe-4S cluster-containing protein K03855 - - 0.0000000000000000000000000000000000000000000000000008788 184.0
MMS3_k127_1486669_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000001861 169.0
MMS3_k127_1486669_8 Ferredoxin - - - 0.000000000000000000000000000000000003309 141.0
MMS3_k127_1486669_9 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02019 - - 0.0000000000000000000000000000000001297 140.0
MMS3_k127_149089_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 6.548e-243 759.0
MMS3_k127_149089_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.017e-195 619.0
MMS3_k127_149089_10 PFAM type II secretion system protein E K02669,K12203 - - 0.0000000000000000000000000000000000000000000000000000005541 195.0
MMS3_k127_149089_11 stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000003692 158.0
MMS3_k127_149089_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000001201 147.0
MMS3_k127_149089_13 YGGT family K02221 - - 0.0000000000000000000000000000000000002029 149.0
MMS3_k127_149089_14 DUF167 K09131 - - 0.00000000000000000000000000000002521 135.0
MMS3_k127_149089_15 - - - - 0.00000000000002253 74.0
MMS3_k127_149089_2 Pfam Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 484.0
MMS3_k127_149089_3 Glutathione S-transferase, C-terminal domain K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 362.0
MMS3_k127_149089_4 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 368.0
MMS3_k127_149089_5 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 352.0
MMS3_k127_149089_6 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 322.0
MMS3_k127_149089_7 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002709 280.0
MMS3_k127_149089_8 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000001386 250.0
MMS3_k127_149089_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000006908 203.0
MMS3_k127_1493290_0 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 461.0
MMS3_k127_1493290_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 454.0
MMS3_k127_1493290_2 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000001377 222.0
MMS3_k127_1493290_3 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000538 126.0
MMS3_k127_1493290_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000005297 83.0
MMS3_k127_1507272_0 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 562.0
MMS3_k127_1509206_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 7.4e-323 992.0
MMS3_k127_1509206_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 2.577e-238 743.0
MMS3_k127_1509206_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 471.0
MMS3_k127_1509206_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 432.0
MMS3_k127_1509206_4 membrane - - - 0.000000000000000000000000000000000000000000799 163.0
MMS3_k127_1509206_5 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000384 72.0
MMS3_k127_151575_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.925e-255 795.0
MMS3_k127_151575_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 444.0
MMS3_k127_151575_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 320.0
MMS3_k127_151575_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000001029 228.0
MMS3_k127_151575_4 ATP synthase K02115 - - 0.00000000000000000000000000000000000000000000000000000000005316 213.0
MMS3_k127_151575_5 epsilon subunit K02114 - - 0.0000000000000000000000000000000000000000000000002923 183.0
MMS3_k127_151575_6 SpoIIAA-like - - - 0.000000000000000000000000000000000000002605 153.0
MMS3_k127_151575_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000004679 144.0
MMS3_k127_151575_8 TIGRFAM F0F1-ATPase subunit K02116 - - 0.00000000000000000000000000000000002846 140.0
MMS3_k127_151575_9 TIGRFAM F1 F0 ATPase, Methanosarcina type, subunit 2 - - - 0.00000000000000000000004076 102.0
MMS3_k127_1526857_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 2.575e-210 657.0
MMS3_k127_1526857_1 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 508.0
MMS3_k127_1526857_2 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000001236 124.0
MMS3_k127_1526857_3 Tryptophan halogenase K14257 - 1.14.19.49 0.0004662 49.0
MMS3_k127_1549976_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 599.0
MMS3_k127_1549976_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 420.0
MMS3_k127_1549976_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000126 260.0
MMS3_k127_1549976_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000009201 201.0
MMS3_k127_1549976_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000009641 179.0
MMS3_k127_1549976_5 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000000002777 141.0
MMS3_k127_1555288_0 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000004402 224.0
MMS3_k127_1555288_1 cell redox homeostasis K02199 - - 0.000000000000000000000000000000000000008139 152.0
MMS3_k127_1556214_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.311e-250 776.0
MMS3_k127_1556214_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.718e-225 709.0
MMS3_k127_1556214_2 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 1.265e-195 619.0
MMS3_k127_1556214_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009688 587.0
MMS3_k127_1556214_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000002284 171.0
MMS3_k127_1556214_5 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000004115 121.0
MMS3_k127_1556214_6 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000174 85.0
MMS3_k127_1557271_0 Domain of unknown function (DUF3364) K02591 - 1.18.6.1 1.709e-258 800.0
MMS3_k127_1557271_1 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.231e-255 794.0
MMS3_k127_1557271_10 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000000000000000000002615 203.0
MMS3_k127_1557271_11 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000000000000000001852 180.0
MMS3_k127_1557271_12 Ferredoxin III, nif-specific - - - 0.000000000000000000000000000000000000000003101 157.0
MMS3_k127_1557271_13 PFAM GCN5-related N-acetyltransferase K22441 - 2.3.1.57 0.000000000000000000000000000000000000000004691 158.0
MMS3_k127_1557271_14 NifQ K15790 - - 0.000000000000000000000000000000000000002912 154.0
MMS3_k127_1557271_15 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000993 101.0
MMS3_k127_1557271_16 Rop-like - - - 0.0000000000000000007161 87.0
MMS3_k127_1557271_17 - - - - 0.000000000003366 69.0
MMS3_k127_1557271_2 Belongs to the NifD NifK NifE NifN family K02592 - - 1.519e-200 634.0
MMS3_k127_1557271_3 PFAM ABC transporter related K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 407.0
MMS3_k127_1557271_4 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 386.0
MMS3_k127_1557271_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 341.0
MMS3_k127_1557271_6 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 - 2.4.2.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 327.0
MMS3_k127_1557271_7 Phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 321.0
MMS3_k127_1557271_8 Nitrogen fixation protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000984 245.0
MMS3_k127_1557271_9 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.00000000000000000000000000000000000000000000000000000000000000006904 224.0
MMS3_k127_1567845_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 2.859e-272 852.0
MMS3_k127_1567845_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 524.0
MMS3_k127_1569631_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 311.0
MMS3_k127_1569631_1 glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003471 286.0
MMS3_k127_1569631_2 PFAM Methyltransferase - - - 0.0000000000000000000001585 109.0
MMS3_k127_1569631_3 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000001021 101.0
MMS3_k127_1573639_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1620.0
MMS3_k127_1573639_1 Protein of unknown function (DUF2892) - - - 0.0000000000000000000000001241 107.0
MMS3_k127_1573639_2 Virulence factor membrane-bound polymerase, C-terminal - - - 0.0000000000000000000000007509 108.0
MMS3_k127_1573639_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000001129 93.0
MMS3_k127_157609_0 Diverse 7TM receptor transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 521.0
MMS3_k127_157609_1 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 482.0
MMS3_k127_157609_10 Protein of unknown function (DUF1289) K06938 - - 0.0000000000000000003501 89.0
MMS3_k127_157609_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 441.0
MMS3_k127_157609_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 419.0
MMS3_k127_157609_4 Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 400.0
MMS3_k127_157609_5 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 392.0
MMS3_k127_157609_6 Ectoine synthase K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000001813 214.0
MMS3_k127_157609_8 Fe-S-cluster oxidoreductase K06940 - - 0.000000000000000000000000000000004443 131.0
MMS3_k127_157609_9 - - - - 0.0000000000000000000000000000004748 127.0
MMS3_k127_1578645_0 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.0 1389.0
MMS3_k127_1578645_1 Molybdopterin oxidoreductase Fe4S4 domain K00372 - - 0.0 1116.0
MMS3_k127_1578645_2 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.00000000000000000000000000000000000000003985 153.0
MMS3_k127_1579632_0 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 507.0
MMS3_k127_1579632_1 Thiopurine S-methyltransferase (TPMT) - - - 0.0000000000000000000000000000000000000000000000000000004966 206.0
MMS3_k127_1579632_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000596 55.0
MMS3_k127_1592652_0 PFAM ATP-binding region ATPase domain protein K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 488.0
MMS3_k127_1592652_1 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 422.0
MMS3_k127_1592652_2 Bacterial regulatory protein, Fis family K15012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002268 254.0
MMS3_k127_1592652_3 Cytochrome b/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000627 228.0
MMS3_k127_1592652_4 - - - - 0.0000000000000000000000000000000000000000000002126 175.0
MMS3_k127_1592652_5 Domain of unknown function (DUF1924) - - - 0.00000000000000006615 83.0
MMS3_k127_1617239_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1005.0
MMS3_k127_1625878_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1030.0
MMS3_k127_1625878_1 cellulose synthase K20541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 561.0
MMS3_k127_1625878_10 - - - - 0.000000000000000001197 87.0
MMS3_k127_1625878_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 516.0
MMS3_k127_1625878_3 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 462.0
MMS3_k127_1625878_4 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 452.0
MMS3_k127_1625878_5 cellulose synthase operon C domain protein K20543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 381.0
MMS3_k127_1625878_6 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 304.0
MMS3_k127_1625878_7 cellulose synthase K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000001384 170.0
MMS3_k127_1625878_8 - - - - 0.000000000000000000000000000000000000004859 152.0
MMS3_k127_1625878_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000000702 109.0
MMS3_k127_1625983_0 fad dependent oxidoreductase K07137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 353.0
MMS3_k127_1625983_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 352.0
MMS3_k127_1625983_2 Invasion gene expression up-regulator, SirB - - - 0.000000000000000000000000000000000000000000004172 168.0
MMS3_k127_1633771_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.1e-299 924.0
MMS3_k127_1633771_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 520.0
MMS3_k127_1633771_10 PFAM regulatory protein, MarR - - - 0.00000000000000000000000000000000000000004179 156.0
MMS3_k127_1633771_11 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000001343 148.0
MMS3_k127_1633771_12 CDGSH-type zinc finger. Function unknown. - - - 0.0000000000000000000000007886 105.0
MMS3_k127_1633771_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 467.0
MMS3_k127_1633771_3 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 376.0
MMS3_k127_1633771_4 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 375.0
MMS3_k127_1633771_5 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 306.0
MMS3_k127_1633771_6 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003961 273.0
MMS3_k127_1633771_7 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000001539 270.0
MMS3_k127_1633771_8 PFAM Lytic transglycosylase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000001148 235.0
MMS3_k127_1633771_9 PFAM PEGA domain protein - - - 0.000000000000000000000000000000000000000000000000000006113 202.0
MMS3_k127_1640265_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 547.0
MMS3_k127_1640265_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 285.0
MMS3_k127_1640265_2 PFAM Phosphoribosyltransferase - - - 0.000000000000000000005705 95.0
MMS3_k127_164698_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 367.0
MMS3_k127_164698_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000006241 115.0
MMS3_k127_164698_2 - - - - 0.000000000000000000003841 97.0
MMS3_k127_164698_3 geranylgeranyl reductase activity - - - 0.000138 54.0
MMS3_k127_1662442_0 Large family of predicted nucleotide-binding domains K07175 - - 8.863e-248 779.0
MMS3_k127_1662442_1 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000004966 231.0
MMS3_k127_1662442_2 Belongs to the MsrB Met sulfoxide reductase family K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000001087 222.0
MMS3_k127_1662442_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000003686 205.0
MMS3_k127_1662442_4 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000008845 195.0
MMS3_k127_1662442_5 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000004725 162.0
MMS3_k127_1662442_6 BolA-like protein K05527 - - 0.0000000000000000000005153 103.0
MMS3_k127_1662442_7 Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000317 65.0
MMS3_k127_1678476_0 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007361 278.0
MMS3_k127_1678476_1 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 GO:0003674,GO:0003824,GO:0004731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016154,GO:0016740,GO:0016757,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000392 136.0
MMS3_k127_1678476_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000004008 125.0
MMS3_k127_1678476_3 hemerythrin HHE cation binding domain - - - 0.0000000000001275 76.0
MMS3_k127_1714139_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 9.38e-277 874.0
MMS3_k127_1720466_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 535.0
MMS3_k127_1720466_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 298.0
MMS3_k127_1720466_2 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001629 278.0
MMS3_k127_1720466_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001479 201.0
MMS3_k127_1720466_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000006084 142.0
MMS3_k127_1720466_5 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000001968 128.0
MMS3_k127_1722327_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 484.0
MMS3_k127_1722327_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 447.0
MMS3_k127_1722327_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 353.0
MMS3_k127_1722327_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000714 240.0
MMS3_k127_1722327_4 SMART RNA-binding S4 domain protein K04762 - - 0.0000000000000000000000000000000000001649 144.0
MMS3_k127_172273_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 8.792e-299 927.0
MMS3_k127_172273_1 TIGRFAM efflux transporter, RND family, MFP subunit K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 384.0
MMS3_k127_1733740_0 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 300.0
MMS3_k127_1733740_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K13642 - - 0.0000000000000000000000000000000002168 141.0
MMS3_k127_1733740_2 YKOF-related Family - - - 0.000000000000000007265 86.0
MMS3_k127_173717_0 Domain of unknown function (DUF3400) - - - 0.0 1524.0
MMS3_k127_173717_1 - - - - 0.00000000000000000000000000000000000007222 148.0
MMS3_k127_1776734_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18138 - - 1.803e-291 910.0
MMS3_k127_1776734_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000001991 64.0
MMS3_k127_1780775_0 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 3.72e-220 690.0
MMS3_k127_1780775_1 Protein of unknown function (DUF615) K09889 - - 0.0000000000000000000000000000000000000000000000000000000000000000004322 234.0
MMS3_k127_1780775_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000004944 213.0
MMS3_k127_1780775_3 Phospholipase/Carboxylesterase K06999 - - 0.00000000009315 66.0
MMS3_k127_1783032_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 7.065e-199 622.0
MMS3_k127_1783032_1 PFAM MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 329.0
MMS3_k127_1783032_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 291.0
MMS3_k127_1783032_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 295.0
MMS3_k127_1783032_4 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000006138 179.0
MMS3_k127_1783032_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000008581 151.0
MMS3_k127_1795314_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 608.0
MMS3_k127_1795314_1 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008666 462.0
MMS3_k127_1795314_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 323.0
MMS3_k127_1795314_3 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001757 278.0
MMS3_k127_1795314_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002 268.0
MMS3_k127_1795314_5 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000009521 263.0
MMS3_k127_1795314_6 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000002591 191.0
MMS3_k127_1799805_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 8.671e-235 730.0
MMS3_k127_1799805_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005057 257.0
MMS3_k127_1799805_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000008968 197.0
MMS3_k127_1805204_0 NiFe/NiFeSe hydrogenase small subunit C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 543.0
MMS3_k127_1805204_1 nitrate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 295.0
MMS3_k127_1805204_2 PFAM Peptidase A31, hydrogen uptake protein K03605 - - 0.000000000000000000000000000000000000000000000000005195 185.0
MMS3_k127_1805204_3 HupH hydrogenase expression protein, C-terminal conserved region - - - 0.0000000000000000000000009986 113.0
MMS3_k127_1805204_4 hydrogenase expression formation protein K04653 - - 0.000000000000000000000001056 106.0
MMS3_k127_1827928_0 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 368.0
MMS3_k127_1827928_1 Sulfurtransferase TusA - - - 0.00000000000000000000000000000000000000000000000000000000000000000007708 233.0
MMS3_k127_1827928_2 - - - - 0.000000000000000000000000000000000000000000000000000000002982 205.0
MMS3_k127_1827928_3 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000006146 185.0
MMS3_k127_1827928_4 Cas6 Crispr - - - 0.00000000000000000000000000000000000000000000000005013 184.0
MMS3_k127_1827928_5 - - - - 0.00000000000000001635 85.0
MMS3_k127_1846513_0 RNB K01147 - 3.1.13.1 1.237e-311 963.0
MMS3_k127_1846513_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 430.0
MMS3_k127_1846513_2 TIGRFAM para-aminobenzoate synthase, subunit I K01665,K03342 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 439.0
MMS3_k127_1846513_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 351.0
MMS3_k127_1846513_4 TonB C terminal K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 323.0
MMS3_k127_1846513_5 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000228 203.0
MMS3_k127_1855991_0 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000927 397.0
MMS3_k127_1855991_1 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003065 276.0
MMS3_k127_1855991_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000000000001008 154.0
MMS3_k127_1868877_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.678e-213 674.0
MMS3_k127_1868877_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000136 84.0
MMS3_k127_1870879_0 PFAM glycosyl transferase family 39 - - - 1.574e-213 676.0
MMS3_k127_1870879_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 311.0
MMS3_k127_1870879_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 284.0
MMS3_k127_1870879_3 GtrA-like protein - - - 0.00000000000000000000000000000000000000000000006973 177.0
MMS3_k127_1873675_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1323.0
MMS3_k127_1873675_1 DinB superfamily - - - 1.413e-200 633.0
MMS3_k127_1873675_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 423.0
MMS3_k127_1873675_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008972 286.0
MMS3_k127_1873675_4 PFAM Signal transduction response regulator, receiver K13041 - - 0.000000000000000000000000000000000000000000000006959 179.0
MMS3_k127_1873675_5 Domain of unknown function (DUF427) - - - 0.000000000000000000000000000000000000013 158.0
MMS3_k127_1873675_6 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000003487 132.0
MMS3_k127_1873675_7 - - - - 0.0000000188 61.0
MMS3_k127_1882055_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.273e-254 789.0
MMS3_k127_1882055_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 546.0
MMS3_k127_1882055_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 496.0
MMS3_k127_1882055_3 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 466.0
MMS3_k127_1882055_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 434.0
MMS3_k127_1882055_5 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 358.0
MMS3_k127_1882055_6 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000005987 138.0
MMS3_k127_1882055_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000001165 110.0
MMS3_k127_1882055_8 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000000000004683 93.0
MMS3_k127_1882055_9 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000004618 88.0
MMS3_k127_1882674_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 298.0
MMS3_k127_1882674_1 COG0433 Predicted ATPase - - - 0.000000000000000000000000003823 119.0
MMS3_k127_1882674_2 lysozyme - - - 0.00000000008721 70.0
MMS3_k127_1892906_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0 2092.0
MMS3_k127_1892906_1 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006074 249.0
MMS3_k127_1892906_2 Activator of Hsp90 ATPase 1 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002833 231.0
MMS3_k127_1892906_3 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000006469 194.0
MMS3_k127_1892906_4 TIGRFAM alternate F1F0 ATPase, F1 subunit gamma K02115 - - 0.000000000000000000000000000000000000000000000001844 176.0
MMS3_k127_1892906_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000006041 155.0
MMS3_k127_1892906_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000002871 102.0
MMS3_k127_1898988_0 Protein of unknown function (DUF1176) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001458 277.0
MMS3_k127_1898988_1 Nitroreductase family - - - 0.00000000000000000000000000000000002015 139.0
MMS3_k127_1918499_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 364.0
MMS3_k127_1918499_1 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000000000000000003216 184.0
MMS3_k127_1918499_2 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000008395 122.0
MMS3_k127_1919116_0 oxidase, subunit K00425 - 1.10.3.14 1.082e-277 864.0
MMS3_k127_1919116_1 oxidase, subunit K00426 - 1.10.3.14 2.221e-198 623.0
MMS3_k127_1919116_2 ABC transporter K16013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 449.0
MMS3_k127_1919116_3 - - - - 0.0000000000000002401 80.0
MMS3_k127_1919116_5 iron dependent repressor - - - 0.0000002535 56.0
MMS3_k127_1933604_0 Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 337.0
MMS3_k127_1933604_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000002353 229.0
MMS3_k127_1933604_2 Domain of unknown function (DUF4389) - - - 0.00000000000000001473 89.0
MMS3_k127_194265_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 470.0
MMS3_k127_194265_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000125 192.0
MMS3_k127_1952383_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1119.0
MMS3_k127_1952383_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.982e-270 849.0
MMS3_k127_1952383_10 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 319.0
MMS3_k127_1952383_11 Phytochelatin synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005277 272.0
MMS3_k127_1952383_12 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001586 259.0
MMS3_k127_1952383_13 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002737 263.0
MMS3_k127_1952383_14 cheY-homologous receiver domain K02657 - - 0.00000000000000000000000000000000000000000000000000000000000009515 214.0
MMS3_k127_1952383_15 cheY-homologous receiver domain K02658 - - 0.000000000000000000000000000000000000000000000000000000004465 203.0
MMS3_k127_1952383_16 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000000000000002917 168.0
MMS3_k127_1952383_17 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000004833 168.0
MMS3_k127_1952383_18 Two component signalling adaptor domain K02659 - - 0.00000000000000000000000000000000000000000615 157.0
MMS3_k127_1952383_19 Tautomerase enzyme K01821 - 5.3.2.6 0.00000000000000000000000000001443 117.0
MMS3_k127_1952383_2 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 1.023e-246 770.0
MMS3_k127_1952383_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 8.482e-226 706.0
MMS3_k127_1952383_4 Cytochrome b(N-terminal)/b6/petB K00412 - - 7.789e-217 678.0
MMS3_k127_1952383_5 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 1.653e-216 680.0
MMS3_k127_1952383_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 8.703e-210 656.0
MMS3_k127_1952383_7 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 357.0
MMS3_k127_1952383_8 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 339.0
MMS3_k127_1952383_9 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 331.0
MMS3_k127_1962133_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.771e-246 766.0
MMS3_k127_1962133_1 Ammonium Transporter Family K03320,K06580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 569.0
MMS3_k127_1962133_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 390.0
MMS3_k127_1962133_3 molybdenum cofactor K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 291.0
MMS3_k127_1962133_4 Ribosomal protein L9, N-terminal domain K02939 - - 0.00000000000000000000000000000000000000000000000000002524 194.0
MMS3_k127_1962133_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000003144 153.0
MMS3_k127_1962133_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000000000003712 153.0
MMS3_k127_1962133_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000001044 153.0
MMS3_k127_1962133_8 DNA replication, synthesis of RNA primer K02686 - - 0.000000000000000000000000264 113.0
MMS3_k127_1964735_0 PFAM peptidase M17 leucyl aminopeptidase domain protein K01255 - 3.4.11.1 7.106e-228 718.0
MMS3_k127_1964735_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 414.0
MMS3_k127_1964735_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 394.0
MMS3_k127_1964735_3 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003884 237.0
MMS3_k127_1964735_4 FecR protein - - - 0.0000000000000000000000000000000000000000000000000001589 196.0
MMS3_k127_1964735_5 Psort location Extracellular, score - - - 0.000000000005812 73.0
MMS3_k127_1978173_0 general secretion pathway protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 310.0
MMS3_k127_1978173_1 general secretion pathway protein K02456 - - 0.0000000000000000000000000000000000000000000000000000000001331 206.0
MMS3_k127_1978173_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000000000000003496 183.0
MMS3_k127_1978173_3 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.0000000000000000000000000000000000000000002334 167.0
MMS3_k127_1978173_4 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000226 147.0
MMS3_k127_1978173_5 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000000001136 129.0
MMS3_k127_1978173_6 general secretion pathway protein K02457 - - 0.00000000000002377 80.0
MMS3_k127_1978173_7 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.000001239 52.0
MMS3_k127_1982004_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 6.645e-205 647.0
MMS3_k127_1982004_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 540.0
MMS3_k127_1982004_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003528 265.0
MMS3_k127_1982004_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000349 231.0
MMS3_k127_1982004_4 Belongs to the UPF0225 family K09858 - - 0.000000000000000000000000000000000000000000000000006476 192.0
MMS3_k127_2011260_0 Circularly permuted ATP-grasp type 2 - - - 4.723e-245 763.0
MMS3_k127_2011260_1 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 383.0
MMS3_k127_2011260_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 357.0
MMS3_k127_2011260_3 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006625 281.0
MMS3_k127_2011260_4 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001241 269.0
MMS3_k127_2011260_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000003463 203.0
MMS3_k127_2011260_6 Rhomboid family K02441 - - 0.00000000000000000000000000000000000000489 154.0
MMS3_k127_2011260_7 Wd-40 repeat - - - 0.0000000000000000000000000000001348 138.0
MMS3_k127_2011260_8 Universal stress protein family - - - 0.0000000000000000000000000001618 120.0
MMS3_k127_2011260_9 - - - - 0.00000000000000000000002943 104.0
MMS3_k127_2016121_0 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 514.0
MMS3_k127_2016121_1 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 304.0
MMS3_k127_2016121_2 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000003086 168.0
MMS3_k127_2023574_0 UDP binding domain K00012 - 1.1.1.22 1.434e-214 673.0
MMS3_k127_2023574_1 PFAM aminotransferase class I and II K14267 - 2.6.1.17 5.29e-209 655.0
MMS3_k127_2023574_10 ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000389 186.0
MMS3_k127_2023574_11 Periplasmic sensor domain - - - 0.000000000000000006258 85.0
MMS3_k127_2023574_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 3.61e-208 651.0
MMS3_k127_2023574_3 PFAM type II secretion system protein E K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 566.0
MMS3_k127_2023574_4 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 522.0
MMS3_k127_2023574_5 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 530.0
MMS3_k127_2023574_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 499.0
MMS3_k127_2023574_7 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 436.0
MMS3_k127_2023574_8 RNA cap guanine-N2 methyltransferase K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 442.0
MMS3_k127_2023574_9 farnesyl-diphosphate farnesyltransferase activity K01623,K02291,K17841 GO:0003674,GO:0003824,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009536,GO:0009975,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016119,GO:0016120,GO:0016740,GO:0016765,GO:0016767,GO:0016853,GO:0016860,GO:0042214,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045436,GO:0046148,GO:0046246,GO:0046905,GO:0071704,GO:1901576 2.5.1.32,2.5.1.99,4.1.2.13,5.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000007572 241.0
MMS3_k127_2026408_0 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 2.741e-283 879.0
MMS3_k127_2026408_1 Polyphosphate kinase 2 (PPK2) - - - 1.401e-245 765.0
MMS3_k127_2026408_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 9.476e-237 742.0
MMS3_k127_2026408_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 357.0
MMS3_k127_2026408_4 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 320.0
MMS3_k127_2026408_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 303.0
MMS3_k127_2026408_6 DSBA-like thioredoxin domain K03673 - - 0.0000000000000000000000000000000000000000000000000000000000003936 218.0
MMS3_k127_2026408_7 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000002429 178.0
MMS3_k127_2026408_8 Sporulation related domain - - - 0.000000000000000000000004545 109.0
MMS3_k127_2052726_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 3.704e-313 964.0
MMS3_k127_2052726_1 NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 595.0
MMS3_k127_2052726_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007814 497.0
MMS3_k127_2052726_3 - - - - 0.00000000000000000001118 96.0
MMS3_k127_2055240_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 1.257e-319 993.0
MMS3_k127_2055240_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 295.0
MMS3_k127_2059672_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1420.0
MMS3_k127_2059672_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001493 265.0
MMS3_k127_2059672_2 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000001415 96.0
MMS3_k127_2060053_0 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 1.662e-196 617.0
MMS3_k127_2060053_1 PFAM Dual specificity protein phosphatase K14165 - 3.1.3.16,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000001765 214.0
MMS3_k127_2060053_2 GTP-binding domain protein K06945 - - 0.000000000000000000000000000000000000000000000000000001108 198.0
MMS3_k127_2060053_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000002351 175.0
MMS3_k127_2060053_4 NADP transhydrogenase K00322,K00324 - 1.6.1.1,1.6.1.2 0.00000000000000000000000000000000000000000001655 164.0
MMS3_k127_2060053_5 - - - - 0.000000172 61.0
MMS3_k127_2072295_0 Arginase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 330.0
MMS3_k127_2072295_1 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007435 272.0
MMS3_k127_2072295_2 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000003944 212.0
MMS3_k127_2072295_3 - - - - 0.0000000000000000000000000000000000000000000000000000000007913 209.0
MMS3_k127_2072295_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000001499 201.0
MMS3_k127_2072295_5 - - - - 0.000001554 55.0
MMS3_k127_2079609_0 epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 372.0
MMS3_k127_2079609_1 Predicted integral membrane protein (DUF2269) - - - 0.0000000000000000000000000000000000000000000000000000000002096 206.0
MMS3_k127_2086422_0 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 426.0
MMS3_k127_2086422_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003095 274.0
MMS3_k127_2094407_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 442.0
MMS3_k127_2094407_1 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 400.0
MMS3_k127_2094407_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000002165 228.0
MMS3_k127_2094407_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000002888 220.0
MMS3_k127_2094407_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000002846 200.0
MMS3_k127_2094407_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000002616 190.0
MMS3_k127_2094407_6 PQ loop repeat K15383 - - 0.0000000000000000000000000000001436 126.0
MMS3_k127_2094407_7 Cupredoxin-like domain - - - 0.0000000000000000000003629 100.0
MMS3_k127_2094407_8 alpha-ribazole phosphatase activity - - - 0.000000000000000006272 92.0
MMS3_k127_2096955_0 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 544.0
MMS3_k127_2096955_1 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008869 398.0
MMS3_k127_2096955_2 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 350.0
MMS3_k127_2096955_3 Belongs to the LDH2 MDH2 oxidoreductase family K00073,K13574 - 1.1.1.350 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 313.0
MMS3_k127_210122_0 N-terminal half of MaoC dehydratase K17865 GO:0003674,GO:0003824,GO:0003859,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0071704 4.2.1.55 0.0000000000000000000000000000000000000838 145.0
MMS3_k127_210122_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000003533 143.0
MMS3_k127_210122_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000001983 65.0
MMS3_k127_2121629_0 May be involved in recombinational repair of damaged DNA K03631 - - 2.646e-235 743.0
MMS3_k127_2121629_1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 524.0
MMS3_k127_2121629_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000007939 115.0
MMS3_k127_2121629_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 454.0
MMS3_k127_2121629_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 417.0
MMS3_k127_2121629_4 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 407.0
MMS3_k127_2121629_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 382.0
MMS3_k127_2121629_6 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001354 270.0
MMS3_k127_2121629_7 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000248 258.0
MMS3_k127_2121629_8 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000144 205.0
MMS3_k127_2121629_9 serine threonine protein kinase - - - 0.000000000000000000000000000000000002006 143.0
MMS3_k127_2132063_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1356.0
MMS3_k127_2132063_1 PFAM ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 331.0
MMS3_k127_2132063_2 PFAM Spermine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 313.0
MMS3_k127_2132063_3 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 303.0
MMS3_k127_2132063_4 Protein of unknown function (DUF2937) - - - 0.00000000000000000000000000000000000000000000000378 178.0
MMS3_k127_2132063_5 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.000000000000000003646 86.0
MMS3_k127_2132063_6 Protein of unknown function (DUF2934) - - - 0.0000000000000003647 83.0
MMS3_k127_213298_0 ATPase family associated with various cellular activities (AAA) - - - 4.265e-269 837.0
MMS3_k127_213298_1 Glutathione S-Transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 311.0
MMS3_k127_213298_2 4Fe-4S dicluster domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009503 250.0
MMS3_k127_213298_3 Oxidoreductase NAD-binding domain K02613 - - 0.000000000000000000000000000000000000000000000000000000003952 219.0
MMS3_k127_2133106_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169,K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 561.0
MMS3_k127_2133106_1 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172,K18357 - 1.2.1.58,1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 286.0
MMS3_k127_2133106_2 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000000000007959 196.0
MMS3_k127_2133106_3 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000000000000005935 152.0
MMS3_k127_2133106_4 - - - - 0.0000000000000005489 85.0
MMS3_k127_2147157_0 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 573.0
MMS3_k127_2147157_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000001661 143.0
MMS3_k127_2147157_2 - - - - 0.00000000000000006602 89.0
MMS3_k127_2147157_3 SEC-C Motif Domain Protein - - - 0.00000302 56.0
MMS3_k127_215061_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 457.0
MMS3_k127_215061_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 413.0
MMS3_k127_215061_2 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.00000000000000000000000000000000000000009454 155.0
MMS3_k127_215061_3 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000339 140.0
MMS3_k127_2151470_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 465.0
MMS3_k127_2151470_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 343.0
MMS3_k127_2151470_2 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000002763 192.0
MMS3_k127_2155954_0 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 315.0
MMS3_k127_2155954_1 Major Facilitator Superfamily K08227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002405 284.0
MMS3_k127_2155954_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000003638 225.0
MMS3_k127_2155954_3 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000002806 211.0
MMS3_k127_2155954_4 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000009133 208.0
MMS3_k127_2155954_5 - - - - 0.0000000000000000000000000000000000005045 143.0
MMS3_k127_2155954_6 Transmembrane anti-sigma factor - - - 0.000000000005436 67.0
MMS3_k127_2155954_7 - - - - 0.0000006053 55.0
MMS3_k127_2160395_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 1.307e-204 643.0
MMS3_k127_2160395_1 - - - - 0.00000000000000000000000000000000000000000000000000005028 198.0
MMS3_k127_2160395_2 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000001306 157.0
MMS3_k127_2166471_0 serine protease K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 569.0
MMS3_k127_2166471_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 391.0
MMS3_k127_2166471_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 364.0
MMS3_k127_2166471_3 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 363.0
MMS3_k127_2166471_4 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000003106 211.0
MMS3_k127_2175818_0 His Kinase A (phosphoacceptor) domain - - - 2.078e-203 652.0
MMS3_k127_2175818_1 Sigma-54 interaction domain K02481 - - 0.00000000000000000000003226 100.0
MMS3_k127_2175818_2 - - - - 0.00000000003415 66.0
MMS3_k127_219378_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 465.0
MMS3_k127_219378_1 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004105 393.0
MMS3_k127_219378_3 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000000001961 103.0
MMS3_k127_2203053_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1164.0
MMS3_k127_2203053_1 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 537.0
MMS3_k127_2203053_2 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 406.0
MMS3_k127_2203053_3 - - - - 0.0000000000000000000000000000000000000000000002126 175.0
MMS3_k127_2203053_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000301 159.0
MMS3_k127_2203053_5 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000000001949 134.0
MMS3_k127_2203053_6 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 0.00000000000000007842 80.0
MMS3_k127_2203053_7 metal cluster binding - - - 0.000001079 55.0
MMS3_k127_2205866_0 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 500.0
MMS3_k127_2205866_1 MBOAT, membrane-bound O-acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 406.0
MMS3_k127_2205866_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.0000000000000000002989 100.0
MMS3_k127_2205866_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.000000000000000000516 96.0
MMS3_k127_2211507_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1450.0
MMS3_k127_2211507_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.307e-313 965.0
MMS3_k127_2211507_10 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 404.0
MMS3_k127_2211507_11 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 301.0
MMS3_k127_2211507_12 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 298.0
MMS3_k127_2211507_13 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003788 239.0
MMS3_k127_2211507_14 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001835 236.0
MMS3_k127_2211507_15 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000004488 224.0
MMS3_k127_2211507_16 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000008997 215.0
MMS3_k127_2211507_17 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000002411 201.0
MMS3_k127_2211507_18 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000003993 200.0
MMS3_k127_2211507_19 PFAM Class I peptide chain release factor K15034 - - 0.000000000000000000000000000000000000000000000000000001083 196.0
MMS3_k127_2211507_2 Mur ligase family, catalytic domain K01924 - 6.3.2.8 6.704e-232 726.0
MMS3_k127_2211507_20 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000001286 156.0
MMS3_k127_2211507_21 Protein of unknown function (DUF721) - - - 0.0000000000000001181 85.0
MMS3_k127_2211507_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 8.614e-223 696.0
MMS3_k127_2211507_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008113 605.0
MMS3_k127_2211507_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 575.0
MMS3_k127_2211507_6 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 535.0
MMS3_k127_2211507_7 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 493.0
MMS3_k127_2211507_8 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 461.0
MMS3_k127_2211507_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 430.0
MMS3_k127_2231824_0 PFAM Mur ligase middle domain protein K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 367.0
MMS3_k127_2231824_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 320.0
MMS3_k127_2231824_2 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000006725 153.0
MMS3_k127_2231824_3 Sporulation related domain K03749 - - 0.000000000000000000000000000000001936 137.0
MMS3_k127_2246205_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1067.0
MMS3_k127_2246205_1 PFAM Isocitrate dehydrogenase NADP-dependent monomeric type K00031 - 1.1.1.42 7.025e-274 852.0
MMS3_k127_2246205_10 Regulatory protein, FmdB family - - - 0.00000000000000000000000000000006393 126.0
MMS3_k127_2246205_11 PFAM FecR protein - - - 0.0000000000000000000000000000005422 132.0
MMS3_k127_2246205_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 619.0
MMS3_k127_2246205_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 309.0
MMS3_k127_2246205_4 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 304.0
MMS3_k127_2246205_5 NUDIX domain K08310 - 3.6.1.67 0.000000000000000000000000000000000000000000000000000000000000001303 221.0
MMS3_k127_2246205_6 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000005063 224.0
MMS3_k127_2246205_7 Protein of unknown function (DUF560) - - - 0.000000000000000000000000000000000000000000000000000003044 208.0
MMS3_k127_2246205_8 PFAM guanine-specific ribonuclease N1 and T1 K01167 - 3.1.27.3 0.00000000000000000000000000000000000004944 149.0
MMS3_k127_2246205_9 Barstar (barnase inhibitor) - - - 0.00000000000000000000000000000000000253 143.0
MMS3_k127_2247771_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1140.0
MMS3_k127_2247771_1 Protein of unknown function - - - 0.0 1042.0
MMS3_k127_2247771_2 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 397.0
MMS3_k127_2247771_3 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 370.0
MMS3_k127_2247771_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 297.0
MMS3_k127_2247771_5 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001298 232.0
MMS3_k127_2247771_6 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000006241 188.0
MMS3_k127_2247771_7 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000386 158.0
MMS3_k127_2247771_8 Chemoreceptor zinc-binding domain - - - 0.0000001628 60.0
MMS3_k127_2247771_9 - - - - 0.0007303 48.0
MMS3_k127_2256820_0 Threonyl and Alanyl tRNA synthetase second additional domain K01868 - 6.1.1.3 0.0 1067.0
MMS3_k127_2256820_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009271 590.0
MMS3_k127_2256820_2 B3/4 domain K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 575.0
MMS3_k127_2256820_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 304.0
MMS3_k127_2256820_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000000002477 203.0
MMS3_k127_2256820_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000000009486 111.0
MMS3_k127_2264057_0 PFAM ABC transporter related - - - 4.128e-297 942.0
MMS3_k127_2264057_1 Glutamate-cysteine ligase K01919 - 6.3.2.2 3.609e-231 721.0
MMS3_k127_2264057_2 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 496.0
MMS3_k127_2264057_3 serine-type endopeptidase activity K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 475.0
MMS3_k127_2264057_4 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 347.0
MMS3_k127_2264057_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 322.0
MMS3_k127_2264057_6 response regulator K07183 - - 0.00000000000000000000000000000000000000000000000000005254 192.0
MMS3_k127_2291803_0 Belongs to the GPI family K01810 - 5.3.1.9 9.998e-241 756.0
MMS3_k127_2291803_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 554.0
MMS3_k127_2291803_2 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 550.0
MMS3_k127_2291803_3 NADH flavin K09461 - 1.14.13.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 516.0
MMS3_k127_2291803_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 318.0
MMS3_k127_2291803_5 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000004261 177.0
MMS3_k127_2291803_6 VirC1 protein K03496 - - 0.00000000000000000000000000000000000000000000003412 179.0
MMS3_k127_2305881_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 597.0
MMS3_k127_2305881_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000005101 145.0
MMS3_k127_230725_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.735e-271 837.0
MMS3_k127_230725_1 Nucleoside H+ symporter K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 491.0
MMS3_k127_230725_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 283.0
MMS3_k127_230725_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000006358 233.0
MMS3_k127_2307387_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 365.0
MMS3_k127_2307387_1 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004977 282.0
MMS3_k127_2307387_2 small protein containing a coiled-coil domain - - - 0.0000000000000001471 81.0
MMS3_k127_2307387_3 SlyX K03745 - - 0.00001083 51.0
MMS3_k127_2307387_4 Transglutaminase-like superfamily - - - 0.0000166 49.0
MMS3_k127_2332532_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 5.927e-199 636.0
MMS3_k127_2332532_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000001155 159.0
MMS3_k127_2332532_2 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000944 119.0
MMS3_k127_2332532_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00001483 47.0
MMS3_k127_233458_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 500.0
MMS3_k127_235483_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1324.0
MMS3_k127_235483_1 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 293.0
MMS3_k127_235483_2 CBS domain containing protein K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 289.0
MMS3_k127_235483_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000001477 235.0
MMS3_k127_235483_4 diguanylate cyclase K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000002752 240.0
MMS3_k127_235483_5 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000002072 150.0
MMS3_k127_2360833_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000806 263.0
MMS3_k127_2360833_1 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009379 262.0
MMS3_k127_2371594_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 446.0
MMS3_k127_2371594_1 vancomycin resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 359.0
MMS3_k127_2371594_2 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 329.0
MMS3_k127_2371594_3 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000011 192.0
MMS3_k127_2372548_0 SMART band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 467.0
MMS3_k127_2372548_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 461.0
MMS3_k127_2372548_2 Phenazine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 356.0
MMS3_k127_2372548_3 PFAM secretion protein HlyD family protein K01993,K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000001922 235.0
MMS3_k127_2372548_4 Membrane protein implicated in regulation of membrane protease activity - - - 0.0000000000000000000000000000000000000008378 151.0
MMS3_k127_2372548_5 HlyD family secretion protein K01993 - - 0.00000005275 54.0
MMS3_k127_2382491_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1195.0
MMS3_k127_2382491_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004355 272.0
MMS3_k127_2382491_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000003644 212.0
MMS3_k127_2382491_3 CRS1_YhbY K07574 - - 0.000000000000000000000000000001201 124.0
MMS3_k127_2424963_0 Amino Acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 488.0
MMS3_k127_2424963_1 acetyl-coa acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005702 254.0
MMS3_k127_2424963_2 AMP-binding enzyme C-terminal domain K01897,K01904 GO:0001676,GO:0003674,GO:0003824,GO:0004467,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006644,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009898,GO:0009987,GO:0015645,GO:0016020,GO:0016042,GO:0016054,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0019395,GO:0019637,GO:0019693,GO:0019752,GO:0030258,GO:0031406,GO:0032787,GO:0033293,GO:0033865,GO:0033875,GO:0034032,GO:0034440,GO:0034641,GO:0035383,GO:0036041,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046395,GO:0046483,GO:0050896,GO:0051186,GO:0055086,GO:0055114,GO:0070538,GO:0071704,GO:0071944,GO:0072329,GO:0072521,GO:0090407,GO:0098552,GO:0098562,GO:1901135,GO:1901360,GO:1901564,GO:1901575,GO:1901576 6.2.1.12,6.2.1.3 0.0000000000000000000000000000000000000000000004928 169.0
MMS3_k127_2425007_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 556.0
MMS3_k127_2425007_1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000001394 236.0
MMS3_k127_2425007_2 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000001839 209.0
MMS3_k127_242523_0 Sodium/hydrogen exchanger family - - - 1.632e-197 624.0
MMS3_k127_242523_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 410.0
MMS3_k127_242523_2 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.0000000000000000000000000000000000000000000001028 177.0
MMS3_k127_242523_3 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000005533 150.0
MMS3_k127_242523_4 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.0006305 51.0
MMS3_k127_2438344_0 Spermidine synthase K00797 - 2.5.1.16 9.705e-270 855.0
MMS3_k127_2438344_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 613.0
MMS3_k127_2438344_10 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000756 284.0
MMS3_k127_2438344_11 Sulfatase-modifying factor enzyme 1 K20333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000943 267.0
MMS3_k127_2438344_12 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000002315 246.0
MMS3_k127_2438344_13 Cytochrome C and Quinol oxidase polypeptide I - - - 0.000000000000000000000000000000000000000000000000000002035 197.0
MMS3_k127_2438344_14 - - - - 0.000000000000000000000000000000000000000000009984 167.0
MMS3_k127_2438344_15 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000000000000000000249 164.0
MMS3_k127_2438344_16 - - - - 0.0000000000000000001931 94.0
MMS3_k127_2438344_17 - - - - 0.000000000003411 72.0
MMS3_k127_2438344_18 - - - - 0.00000000005845 66.0
MMS3_k127_2438344_2 4 iron, 4 sulfur cluster binding K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 565.0
MMS3_k127_2438344_3 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 567.0
MMS3_k127_2438344_4 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 540.0
MMS3_k127_2438344_5 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 520.0
MMS3_k127_2438344_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008652 502.0
MMS3_k127_2438344_7 Polysaccharide biosynthesis protein K15894 - 4.2.1.115 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 422.0
MMS3_k127_2438344_8 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 390.0
MMS3_k127_2438344_9 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 330.0
MMS3_k127_2438380_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1275.0
MMS3_k127_2438380_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 562.0
MMS3_k127_2438380_2 Rhodanese Homology Domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 469.0
MMS3_k127_2438380_3 helix_turn_helix, Lux Regulon K11712,K14987 - - 0.000000000000000000000000000016 126.0
MMS3_k127_2438380_4 - - - - 0.000000000001421 76.0
MMS3_k127_2438380_5 Histidine kinase K07673 - 2.7.13.3 0.00000008338 58.0
MMS3_k127_2439617_0 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 533.0
MMS3_k127_2439617_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 461.0
MMS3_k127_2439617_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 391.0
MMS3_k127_2439617_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 310.0
MMS3_k127_2439617_4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000002051 137.0
MMS3_k127_2441909_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 4.804e-264 825.0
MMS3_k127_2441909_1 receptor K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 430.0
MMS3_k127_2441909_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 402.0
MMS3_k127_2441909_3 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 336.0
MMS3_k127_2441909_4 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000649 277.0
MMS3_k127_2441909_5 Cell division protein ZapA K09888 - - 0.00000000000000000000000000000000000000000001207 164.0
MMS3_k127_2441909_6 - - - - 0.00000000000000000000000000000000000000000003222 168.0
MMS3_k127_2441909_7 - - - - 0.0000000000005972 70.0
MMS3_k127_2449147_0 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 467.0
MMS3_k127_2449147_1 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 325.0
MMS3_k127_2449147_2 capsule biosynthesis protein CapA K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004116 266.0
MMS3_k127_2455564_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 9.293e-292 903.0
MMS3_k127_2455564_1 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 533.0
MMS3_k127_2455564_2 Zinc-binding dehydrogenase K13979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 329.0
MMS3_k127_2455564_3 transcriptional K03719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001066 260.0
MMS3_k127_2457428_0 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 5.715e-251 781.0
MMS3_k127_2457428_1 PFAM cytochrome c biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 346.0
MMS3_k127_2457428_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009172 242.0
MMS3_k127_2457428_3 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000001101 228.0
MMS3_k127_2457428_4 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000000000000000000000000000000000000259 218.0
MMS3_k127_2457428_5 Maf-like protein K06287 - - 0.000000000000000000000000004959 111.0
MMS3_k127_2467610_0 PFAM Major Facilitator Superfamily K02575 - - 1.881e-200 631.0
MMS3_k127_2467610_1 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 521.0
MMS3_k127_2467610_2 ANTAR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 493.0
MMS3_k127_2467610_3 SMART protein phosphatase 2C domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 409.0
MMS3_k127_2467610_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000000000000000000005375 209.0
MMS3_k127_2467610_5 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000006298 171.0
MMS3_k127_246868_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1374.0
MMS3_k127_2488402_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1652.0
MMS3_k127_2488402_1 PFAM cytochrome c class I K08738 - - 0.00000000000000000000000000000004044 132.0
MMS3_k127_2488402_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000002945 55.0
MMS3_k127_2494203_0 Histidine Phosphotransfer domain K02487,K06596 - - 0.0 1446.0
MMS3_k127_2494203_1 Amidohydrolase family K01465 - 3.5.2.3 1.452e-232 733.0
MMS3_k127_2494203_2 PFAM aspartate ornithine carbamoyltransferase Asp Orn-binding region K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 546.0
MMS3_k127_2494203_3 histidine kinase HAMP region domain protein K02660,K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 474.0
MMS3_k127_2494203_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005013 273.0
MMS3_k127_2494203_5 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.0000000000000000000000000000000000000000000000000000000000000000000000001165 250.0
MMS3_k127_2494203_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000000000002707 210.0
MMS3_k127_2495586_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 5.599e-206 652.0
MMS3_k127_2495586_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 521.0
MMS3_k127_2495586_2 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000000000000000000006982 155.0
MMS3_k127_2498789_0 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 371.0
MMS3_k127_2498789_1 Bacterial dnaA protein K10763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 282.0
MMS3_k127_2498789_2 pathogenesis - - - 0.00000000000000000000000000000000000000000000007377 176.0
MMS3_k127_2502965_0 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 502.0
MMS3_k127_2502965_1 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 345.0
MMS3_k127_2502965_2 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 325.0
MMS3_k127_2502965_3 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007485 302.0
MMS3_k127_2502965_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000005656 173.0
MMS3_k127_2502965_5 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.000000000000000000000000000003377 122.0
MMS3_k127_2502965_6 - - - - 0.00000000000000000000000005336 115.0
MMS3_k127_2502965_7 SlyX K03745 - - 0.0000000000000000696 82.0
MMS3_k127_2502965_8 - - - - 0.000000000000007514 82.0
MMS3_k127_2510139_0 TonB dependent receptor - - - 1.951e-205 658.0
MMS3_k127_2510260_0 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008548 554.0
MMS3_k127_2510260_1 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 501.0
MMS3_k127_2510260_2 cytochrome - - - 0.000000000000000000000000000000000000000000000000000001784 200.0
MMS3_k127_2510260_3 Cytochrome c - - - 0.00000000000000000000000000000000000307 141.0
MMS3_k127_2512688_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 505.0
MMS3_k127_2512688_1 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 406.0
MMS3_k127_2512688_2 Protein of unknown function (DUF3426) - - - 0.0000000000000006415 79.0
MMS3_k127_2521668_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1089.0
MMS3_k127_2521668_1 Cysteine-rich domain - - - 1.256e-281 870.0
MMS3_k127_2521668_2 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 338.0
MMS3_k127_2521668_3 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 336.0
MMS3_k127_2521668_4 DsrE/DsrF-like family K07236 - - 0.0000000000000000000000000000000000000000000000000000000001593 204.0
MMS3_k127_2521668_5 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000000000007594 202.0
MMS3_k127_2521668_6 - - - - 0.0000000000000000000000000000000000002022 145.0
MMS3_k127_2521668_7 DsrH like protein K07237 - - 0.0000000000000000000000000000000001542 134.0
MMS3_k127_2521668_8 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000001784 131.0
MMS3_k127_2524287_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1273.0
MMS3_k127_2546197_0 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 1.208e-234 731.0
MMS3_k127_2546197_1 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 284.0
MMS3_k127_2554958_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 412.0
MMS3_k127_2554958_1 PFAM outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 372.0
MMS3_k127_2554958_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 352.0
MMS3_k127_2554958_3 Copper binding periplasmic protein CusF K07798,K15727 - - 0.000000000000000000000000000000000002024 151.0
MMS3_k127_2555690_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 320.0
MMS3_k127_2555690_1 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000002407 177.0
MMS3_k127_2555690_2 CBS domain - - - 0.000000000000000000000000004561 118.0
MMS3_k127_2555690_3 - - - - 0.000003312 54.0
MMS3_k127_2555690_4 - - - - 0.00002388 49.0
MMS3_k127_2569259_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 1.519e-239 742.0
MMS3_k127_2569259_1 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 411.0
MMS3_k127_2569259_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 406.0
MMS3_k127_2569259_3 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 313.0
MMS3_k127_2569259_4 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 282.0
MMS3_k127_2569259_5 Segregation and condensation complex subunit ScpB K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009613 266.0
MMS3_k127_2569259_6 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000001716 123.0
MMS3_k127_2589089_0 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 327.0
MMS3_k127_2589089_1 Protein conserved in bacteria K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000001301 141.0
MMS3_k127_2589089_2 Acetyltransferase K03789,K14742 - 2.3.1.128 0.0000000000000000000000006699 106.0
MMS3_k127_2599928_0 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 568.0
MMS3_k127_2599928_1 SMART helix-turn-helix- domain containing protein AraC type K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 422.0
MMS3_k127_2599928_2 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000001563 237.0
MMS3_k127_2599928_3 Protein of unknown function (DUF1614) - - - 0.0000000000000000000000000000000000000000000000000003894 200.0
MMS3_k127_2599928_4 peroxiredoxin activity - - - 0.000000000000000000000000000003885 122.0
MMS3_k127_2599928_5 - - - - 0.0000000000000597 79.0
MMS3_k127_2599928_6 Cytochrome c - - - 0.00001587 49.0
MMS3_k127_2615525_0 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 520.0
MMS3_k127_2615525_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 413.0
MMS3_k127_2615525_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 318.0
MMS3_k127_2623140_0 RmuC family K09760 - - 1.791e-194 613.0
MMS3_k127_2623140_1 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001719 276.0
MMS3_k127_2651189_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 301.0
MMS3_k127_2651189_1 - - - - 0.000000000000000000000000001838 129.0
MMS3_k127_2655556_0 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 522.0
MMS3_k127_2655556_1 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 521.0
MMS3_k127_2655556_2 - K06950 - - 0.0000000000000007121 82.0
MMS3_k127_2655556_3 Ribosomal protein L31 K02909 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000003739 66.0
MMS3_k127_2658451_0 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 498.0
MMS3_k127_2658451_1 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004962 251.0
MMS3_k127_2658451_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000002883 139.0
MMS3_k127_2658451_3 Predicted integral membrane protein (DUF2269) - - - 0.0003508 50.0
MMS3_k127_2662124_0 AAA domain K02224 - 6.3.5.11,6.3.5.9 3.359e-210 663.0
MMS3_k127_2662124_1 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 563.0
MMS3_k127_2662124_2 PFAM MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 341.0
MMS3_k127_2662124_3 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000003545 230.0
MMS3_k127_266526_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009771 483.0
MMS3_k127_266526_1 Sigma-70 factor, region 1.2 K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 394.0
MMS3_k127_266526_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 334.0
MMS3_k127_266526_3 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 313.0
MMS3_k127_266526_4 E-Z type HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000001231 220.0
MMS3_k127_266526_5 Response regulator receiver domain - - - 0.000000000000000000000000000000000000000001483 162.0
MMS3_k127_2667752_0 PAS S-box diguanylate cyclase domain-containing protein - - - 4.607e-240 784.0
MMS3_k127_2667752_1 Aldo/keto reductase family K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 509.0
MMS3_k127_2667752_10 diguanylate cyclase - - - 0.000000000000000000000000000000009989 146.0
MMS3_k127_2667752_2 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 400.0
MMS3_k127_2667752_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 398.0
MMS3_k127_2667752_4 Protein of unknown function (DUF2167) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 331.0
MMS3_k127_2667752_5 PFAM GumN family protein K09973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 317.0
MMS3_k127_2667752_6 Virulence factor BrkB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 302.0
MMS3_k127_2667752_7 Glycine cleavage system K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009982 273.0
MMS3_k127_2667752_8 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007208 235.0
MMS3_k127_2667752_9 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000000003317 185.0
MMS3_k127_2672841_0 Chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 589.0
MMS3_k127_2672841_1 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 316.0
MMS3_k127_2672841_2 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000005584 226.0
MMS3_k127_2672841_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000001627 166.0
MMS3_k127_2672841_4 Protein of unknown function (DUF1272) K09984 - - 0.00000000000000000000000000000000000006307 144.0
MMS3_k127_2672841_5 RDD family - - - 0.00000000000000000000000000000000001064 141.0
MMS3_k127_2672841_7 - - - - 0.0000001733 59.0
MMS3_k127_2673062_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365,K05366 - 2.4.1.129,3.4.16.4 1.551e-240 753.0
MMS3_k127_2673062_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 614.0
MMS3_k127_2673062_10 KTSC domain - - - 0.000000000000000000000000000009913 122.0
MMS3_k127_2673062_11 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000005201 55.0
MMS3_k127_2673062_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 469.0
MMS3_k127_2673062_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002635 257.0
MMS3_k127_2673062_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000002886 216.0
MMS3_k127_2673062_5 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000361 218.0
MMS3_k127_2673062_6 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000002178 203.0
MMS3_k127_2673062_7 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000001699 177.0
MMS3_k127_2673062_8 - - - - 0.000000000000000000000000000000000000000000002479 169.0
MMS3_k127_2673062_9 photosynthesis K12132,K20543 - 2.7.11.1 0.0000000000000000000000000000000003237 138.0
MMS3_k127_2686800_0 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 490.0
MMS3_k127_2686800_1 Periplasmic sensor domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 441.0
MMS3_k127_2686800_2 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000009582 154.0
MMS3_k127_2686800_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000002115 96.0
MMS3_k127_2688461_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 547.0
MMS3_k127_2688461_1 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 295.0
MMS3_k127_2688461_2 Protein of unknown function (DUF2288) - - - 0.00000000000000000000000000000000001291 139.0
MMS3_k127_2688461_4 Belongs to the sulfur carrier protein TusA family - - - 0.000000005406 57.0
MMS3_k127_2697232_0 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein K00381,K00392 - 1.8.1.2,1.8.7.1 1.944e-240 754.0
MMS3_k127_2697232_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001204 251.0
MMS3_k127_2699880_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.558e-239 746.0
MMS3_k127_2699880_1 ACT domain K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 1.001e-221 696.0
MMS3_k127_2699880_2 Nitroreductase family - - - 8.753e-209 662.0
MMS3_k127_2699880_3 4Fe-4S dicluster domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 376.0
MMS3_k127_2699880_4 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000009854 181.0
MMS3_k127_2715927_0 PFAM major facilitator superfamily MFS_1 K08218 - - 1.06e-200 640.0
MMS3_k127_2715927_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 379.0
MMS3_k127_2715927_2 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 310.0
MMS3_k127_272243_0 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 1.008e-239 748.0
MMS3_k127_272243_1 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 407.0
MMS3_k127_276292_0 Glycoside-hydrolase family GH114 K21006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 418.0
MMS3_k127_276292_1 Tetratricopeptide repeat K21007 - - 0.0000000000000000000000000000000000000000000002202 186.0
MMS3_k127_276292_2 Tetratricopeptide repeat K21007 - - 0.000000000000000006253 93.0
MMS3_k127_2764884_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 622.0
MMS3_k127_2764884_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 444.0
MMS3_k127_2764884_2 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 336.0
MMS3_k127_2764884_3 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002215 270.0
MMS3_k127_2764884_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000157 225.0
MMS3_k127_276875_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 1.573e-284 885.0
MMS3_k127_276875_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.1e-231 720.0
MMS3_k127_276875_10 Transcriptional regulator K13643 - - 0.000000000000000000000000000000000000000000000000000000004491 202.0
MMS3_k127_276875_11 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.000000000000000000000000000000000000000000000000000002212 192.0
MMS3_k127_276875_12 TIGRFAM iron-sulfur cluster assembly protein IscA K13628 - - 0.0000000000000000000000000000000000000000000000000007404 184.0
MMS3_k127_276875_13 PFAM HPP family protein K07168 - - 0.000000000000000000000000000000000000000663 156.0
MMS3_k127_276875_14 Putative thioesterase (yiiD_Cterm) - - - 0.000000000000000000000000000000001216 134.0
MMS3_k127_276875_15 Iron-sulphur cluster assembly - - - 0.0000000000000000000000000002728 115.0
MMS3_k127_276875_2 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 404.0
MMS3_k127_276875_3 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 380.0
MMS3_k127_276875_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 350.0
MMS3_k127_276875_5 Protein of unknown function (DUF3050) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 336.0
MMS3_k127_276875_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 310.0
MMS3_k127_276875_7 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000002118 234.0
MMS3_k127_276875_8 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000000000000000000000000004012 231.0
MMS3_k127_276875_9 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.000000000000000000000000000000000000000000000000000000000000002917 222.0
MMS3_k127_2770361_0 Bacterial-like globin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 340.0
MMS3_k127_2770361_1 transcription factor binding - - - 0.00000000000000000000000000000000000000000000000000000008728 198.0
MMS3_k127_2770361_2 Roadblock/LC7 domain K07131 - - 0.000000000000000000000000008859 114.0
MMS3_k127_2793858_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 375.0
MMS3_k127_2793858_1 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009403 271.0
MMS3_k127_2794559_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.452e-265 821.0
MMS3_k127_2794559_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 443.0
MMS3_k127_2794559_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 385.0
MMS3_k127_2794559_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009563 373.0
MMS3_k127_2794559_4 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 334.0
MMS3_k127_2794559_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 289.0
MMS3_k127_2794559_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000000000004287 158.0
MMS3_k127_2794559_7 Domain of unknown function (DUF4845) - - - 0.000000000000002057 81.0
MMS3_k127_2803543_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1365.0
MMS3_k127_2803543_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 319.0
MMS3_k127_2803543_2 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 304.0
MMS3_k127_2803543_3 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 303.0
MMS3_k127_2803543_4 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000518 232.0
MMS3_k127_2803543_5 - - - - 0.000000000000000000000000000000003884 136.0
MMS3_k127_2803543_6 PFAM cytochrome c class I K08738 - - 0.000000000000000000000000007647 115.0
MMS3_k127_2803543_8 - - - - 0.0000000000000001005 86.0
MMS3_k127_2803543_9 Glycosyl hydrolase family 92 - - - 0.000000000007651 68.0
MMS3_k127_2808681_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 2.34e-308 960.0
MMS3_k127_2808681_1 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 415.0
MMS3_k127_2808681_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002909 242.0
MMS3_k127_2808681_3 dihydroorotase K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000007855 170.0
MMS3_k127_2808681_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000146 55.0
MMS3_k127_2812884_0 PUA-like domain K00958 - 2.7.7.4 6.173e-226 705.0
MMS3_k127_2812884_1 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 2.215e-215 669.0
MMS3_k127_2812884_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 484.0
MMS3_k127_2812884_3 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 334.0
MMS3_k127_2812884_4 Fumarate reductase flavoprotein C-term K00394 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000006843 221.0
MMS3_k127_2812884_5 adenylylsulfate reductase alpha subunit K00394 - 1.8.99.2 0.0000001998 55.0
MMS3_k127_2818761_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0 1182.0
MMS3_k127_2818761_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.677e-197 622.0
MMS3_k127_2818761_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 520.0
MMS3_k127_2818761_3 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 368.0
MMS3_k127_2818761_4 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 307.0
MMS3_k127_2818761_5 Universal stress protein family - - - 0.000000000000000000000000000000000000000000002623 175.0
MMS3_k127_2825464_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 391.0
MMS3_k127_2825464_1 endonuclease III K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 318.0
MMS3_k127_2828474_0 COG0474 Cation transport ATPase K01531 - 3.6.3.2 0.0 1329.0
MMS3_k127_2828474_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 1.168e-216 677.0
MMS3_k127_2828474_10 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000005838 229.0
MMS3_k127_2828474_11 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000000000003012 212.0
MMS3_k127_2828474_12 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000009009 194.0
MMS3_k127_2828474_13 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000003984 181.0
MMS3_k127_2828474_14 PFAM Di-haem cytochrome c - - - 0.000000000000000000000000000000000000000004546 160.0
MMS3_k127_2828474_15 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000000001407 132.0
MMS3_k127_2828474_16 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000001985 126.0
MMS3_k127_2828474_2 PFAM aminotransferase class I and II K00812 - 2.6.1.1 2.178e-211 661.0
MMS3_k127_2828474_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 571.0
MMS3_k127_2828474_4 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 496.0
MMS3_k127_2828474_5 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 426.0
MMS3_k127_2828474_6 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 293.0
MMS3_k127_2828474_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001849 269.0
MMS3_k127_2828474_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007249 267.0
MMS3_k127_2828474_9 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002828 261.0
MMS3_k127_2838490_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 5.178e-241 749.0
MMS3_k127_2838490_1 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 2.033e-215 672.0
MMS3_k127_2838490_2 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000004736 125.0
MMS3_k127_285760_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 510.0
MMS3_k127_285760_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 465.0
MMS3_k127_285760_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 402.0
MMS3_k127_285760_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009755 316.0
MMS3_k127_2858246_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.919e-250 777.0
MMS3_k127_2858246_1 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 429.0
MMS3_k127_2858246_2 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000009159 147.0
MMS3_k127_2858246_3 - - - - 0.0000000000000001933 79.0
MMS3_k127_2887842_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 3.895e-199 632.0
MMS3_k127_2887842_1 PFAM permease YjgP YjgQ family protein K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 466.0
MMS3_k127_2887842_2 PFAM permease YjgP YjgQ family protein K11720 - - 0.0000000000000000000001454 106.0
MMS3_k127_2910893_0 Enoyl-CoA hydratase/isomerase K07516 - 1.1.1.35 0.0 1330.0
MMS3_k127_2910893_1 Acyl-CoA dehydrogenases K06445 - - 9.528e-305 954.0
MMS3_k127_2910893_10 - - - - 0.000000000000000000000000000000000000000000000000009629 188.0
MMS3_k127_2910893_11 PFAM glutathione-dependent formaldehyde-activating GFA - - - 0.000000000000000000000000000000000000000000000006479 176.0
MMS3_k127_2910893_12 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000000000000001547 173.0
MMS3_k127_2910893_13 - - - - 0.00000004475 55.0
MMS3_k127_2910893_2 AMP-binding enzyme K01897 - 6.2.1.3 2.403e-246 774.0
MMS3_k127_2910893_3 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 3.561e-209 652.0
MMS3_k127_2910893_4 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 432.0
MMS3_k127_2910893_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 370.0
MMS3_k127_2910893_6 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 377.0
MMS3_k127_2910893_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 328.0
MMS3_k127_2910893_8 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003613 263.0
MMS3_k127_2910893_9 PFAM thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000000000000000000003647 214.0
MMS3_k127_2912998_0 PFAM DEAD DEAH box helicase domain protein - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 6.825e-208 660.0
MMS3_k127_2912998_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 539.0
MMS3_k127_2912998_10 Cupredoxin-like domain - - - 0.00000000000000000000000000002258 120.0
MMS3_k127_2912998_2 PFAM iron permease FTR1 K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 362.0
MMS3_k127_2912998_3 Transglycosylase SLT domain K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004935 279.0
MMS3_k127_2912998_4 PFAM ferric-uptake regulator K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000004268 237.0
MMS3_k127_2912998_5 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000007292 236.0
MMS3_k127_2912998_6 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000483 222.0
MMS3_k127_2912998_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000213 218.0
MMS3_k127_2912998_8 NlpC/P60 family K19303 - - 0.000000000000000000000000000000000000009664 150.0
MMS3_k127_2912998_9 - - - - 0.00000000000000000000000000000006064 128.0
MMS3_k127_2915379_0 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 339.0
MMS3_k127_2915379_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 329.0
MMS3_k127_2915379_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007515 267.0
MMS3_k127_2915379_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000006646 196.0
MMS3_k127_2919882_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 6.661e-251 784.0
MMS3_k127_2919882_1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000004752 170.0
MMS3_k127_2919882_2 Permease MlaE K02066 - - 0.0000000000000000000000000000000000003658 151.0
MMS3_k127_2919882_3 Belongs to the ompA family K03286 - - 0.0000000000000000001107 95.0
MMS3_k127_2919882_5 ABC transporter - - - 0.0000001207 61.0
MMS3_k127_2920061_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 4.701e-194 614.0
MMS3_k127_2920061_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006633 484.0
MMS3_k127_2925451_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 552.0
MMS3_k127_2925451_1 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 399.0
MMS3_k127_2925451_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003282 267.0
MMS3_k127_2938014_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K21834 - - 7.902e-214 668.0
MMS3_k127_2938014_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 569.0
MMS3_k127_2938014_2 - - - - 0.0000000000000000000000000000000000000000000000276 173.0
MMS3_k127_2938276_0 Bacterial protein of unknown function (DUF898) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 300.0
MMS3_k127_2938276_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001487 260.0
MMS3_k127_2938276_2 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.000000000000000000000000000000000000054 144.0
MMS3_k127_2970809_0 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 552.0
MMS3_k127_2970809_1 ABC transporter permease K17238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 386.0
MMS3_k127_2970809_2 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 376.0
MMS3_k127_2970809_3 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 361.0
MMS3_k127_2986261_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.932e-233 726.0
MMS3_k127_2986261_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 1.866e-206 645.0
MMS3_k127_2986261_2 NeuB family K03856 - 2.5.1.54 6.625e-195 615.0
MMS3_k127_2986261_3 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 584.0
MMS3_k127_2986261_4 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 545.0
MMS3_k127_2986261_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 540.0
MMS3_k127_2986261_6 Chorismate mutase type II K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 495.0
MMS3_k127_2986261_7 OsmC-like protein - - - 0.000000000000000000000000000000000000006295 149.0
MMS3_k127_2990176_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 9.798e-303 932.0
MMS3_k127_2990176_1 PFAM Glycoside hydrolase 15-related - - - 3.078e-243 756.0
MMS3_k127_2990176_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003762 279.0
MMS3_k127_2990176_3 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000817 54.0
MMS3_k127_2990667_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1280.0
MMS3_k127_2990667_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 393.0
MMS3_k127_2993084_0 protein with protein kinase and helix-hairpin-helix DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001438 267.0
MMS3_k127_2993084_1 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004761 232.0
MMS3_k127_2993084_2 Protein phosphatase 2C - - - 0.0000000000000000000000000000000000000000000000000000005999 201.0
MMS3_k127_2993084_3 Transcriptional regulatory protein, C terminal K02483,K07659 - - 0.000000000000000000000000000000000000000000000000003492 184.0
MMS3_k127_2993084_4 probably involved in intracellular septation K06190 - - 0.000000001246 66.0
MMS3_k127_300466_0 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002898 252.0
MMS3_k127_300466_1 Threonine synthase N terminus K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003488 249.0
MMS3_k127_300466_2 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000000000000000000000000002743 169.0
MMS3_k127_300466_3 Cupin domain - - - 0.000000000001173 72.0
MMS3_k127_3019951_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1232.0
MMS3_k127_3019951_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 2.014e-310 957.0
MMS3_k127_3019951_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 6.436e-269 839.0
MMS3_k127_3019951_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 1.048e-209 658.0
MMS3_k127_3019951_4 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 403.0
MMS3_k127_3027958_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1342.0
MMS3_k127_3027958_1 histidine kinase HAMP region domain protein - - - 6.085e-258 816.0
MMS3_k127_3027958_10 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 366.0
MMS3_k127_3027958_11 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 349.0
MMS3_k127_3027958_12 Domain of unknown function DUF21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 295.0
MMS3_k127_3027958_13 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005822 277.0
MMS3_k127_3027958_14 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000002568 252.0
MMS3_k127_3027958_15 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000001995 213.0
MMS3_k127_3027958_16 COG2346, Truncated hemoglobins K03406,K06886 GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016491,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0020012,GO:0020037,GO:0030682,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043207,GO:0044237,GO:0044248,GO:0044270,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0048037,GO:0050896,GO:0051213,GO:0051410,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:0075136,GO:0097159,GO:0098754,GO:1901363,GO:1901698,GO:2001057 - 0.0000000000000000000000000000000000000000000000000000000002185 204.0
MMS3_k127_3027958_17 Protein of unknown function (DUF494) K03747 - - 0.00000000000000000000000000000000000000000000000000000003033 201.0
MMS3_k127_3027958_18 TIGRFAM transcriptional regulator, Rrf2 family K13771 - - 0.0000000000000000000000000000000000000000000000005967 179.0
MMS3_k127_3027958_19 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000007947 167.0
MMS3_k127_3027958_2 PFAM Type II secretion system F domain K02653 - - 3.033e-198 625.0
MMS3_k127_3027958_20 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000002335 83.0
MMS3_k127_3027958_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 521.0
MMS3_k127_3027958_4 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 486.0
MMS3_k127_3027958_5 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 458.0
MMS3_k127_3027958_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 429.0
MMS3_k127_3027958_7 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 398.0
MMS3_k127_3027958_8 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009267 396.0
MMS3_k127_3027958_9 Oxidoreductase FAD-binding domain K14581 - 1.18.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 392.0
MMS3_k127_3029446_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 439.0
MMS3_k127_3029446_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 GO:0002097,GO:0002101,GO:0002136,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0032267,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 308.0
MMS3_k127_3029446_2 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K11707 - - 0.000000000000000000000000000000000000000000009189 170.0
MMS3_k127_3036133_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 1.775e-280 881.0
MMS3_k127_3036133_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.266e-210 660.0
MMS3_k127_3036133_11 Protein of unknown function (DUF2892) - - - 0.0000004544 55.0
MMS3_k127_3036133_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 494.0
MMS3_k127_3036133_4 MAPEG family - - - 0.000000000000000000000000000000000006114 141.0
MMS3_k127_3036133_5 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000001288 134.0
MMS3_k127_3036133_7 COG0526 Thiol-disulfide isomerase and thioredoxins K02199 - - 0.000000000000000000001248 102.0
MMS3_k127_3036133_9 Major facilitator superfamily - - - 0.0000000002181 63.0
MMS3_k127_3062015_0 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 545.0
MMS3_k127_3062015_1 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009549 424.0
MMS3_k127_3062015_2 Cytochrome c K19713 - 1.8.2.2 0.00000000000000000000000000000000000003667 147.0
MMS3_k127_3062015_3 Protein of unknown function DUF58 - - - 0.00000000000000003668 84.0
MMS3_k127_3072952_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 6.172e-231 722.0
MMS3_k127_3072952_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 382.0
MMS3_k127_3072952_2 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 313.0
MMS3_k127_3072952_3 pteridine-dependent deoxygenase - - - 0.0000000000000001529 83.0
MMS3_k127_3072952_4 - - - - 0.00003723 46.0
MMS3_k127_3072952_5 Tetratricopeptide repeat - - - 0.0003116 44.0
MMS3_k127_3078044_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.695e-214 674.0
MMS3_k127_3078044_1 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 549.0
MMS3_k127_3078044_2 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 349.0
MMS3_k127_3078044_3 MucB/RseB C-terminal domain K03598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 326.0
MMS3_k127_3078044_4 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.0000000000000000000000000000000000000000001226 164.0
MMS3_k127_3078044_5 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.0000000000009194 74.0
MMS3_k127_3094557_0 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007327 280.0
MMS3_k127_3094557_1 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001063 260.0
MMS3_k127_3094557_2 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007065 259.0
MMS3_k127_3101811_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 2.048e-233 729.0
MMS3_k127_3101811_1 Nitronate monooxygenase K00459 - 1.13.12.16 3.213e-228 712.0
MMS3_k127_3101811_2 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 333.0
MMS3_k127_3102357_0 Belongs to the peptidase S16 family - - - 1.339e-239 765.0
MMS3_k127_3102357_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 559.0
MMS3_k127_3102357_2 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000000000000005831 229.0
MMS3_k127_3102357_3 PFAM Signal transduction response regulator, receiver K13041 - - 0.0000000000000000000000000000000000000000000000000000001414 201.0
MMS3_k127_3102357_4 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000006284 190.0
MMS3_k127_3102357_5 Smr domain - - - 0.000000000000000000000000000000000000000001416 165.0
MMS3_k127_3102357_6 Transglycosylase SLT domain K08305 - - 0.00000000000003838 85.0
MMS3_k127_31240_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 8.048e-300 931.0
MMS3_k127_31240_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 578.0
MMS3_k127_31240_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 304.0
MMS3_k127_31240_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009488 270.0
MMS3_k127_312403_0 Phage Terminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 546.0
MMS3_k127_312403_1 TIGRFAM phage portal protein, HK97 family - - - 0.00000000000000000000000000000000776 136.0
MMS3_k127_312403_2 HNH endonuclease K07451 - - 0.000000000000000000000000000001375 123.0
MMS3_k127_312403_3 Phage terminase, small subunit - - - 0.00000000000004389 80.0
MMS3_k127_3126874_0 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 452.0
MMS3_k127_3126874_1 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 291.0
MMS3_k127_315864_0 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 4.094e-218 679.0
MMS3_k127_315864_1 Methyltransferase domain K19620 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 612.0
MMS3_k127_315864_2 Histidine kinase K19621 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 486.0
MMS3_k127_315864_3 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000942 450.0
MMS3_k127_315864_4 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 413.0
MMS3_k127_315864_5 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 406.0
MMS3_k127_315864_6 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 390.0
MMS3_k127_315864_7 response regulator K19622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 368.0
MMS3_k127_315864_8 response regulator K19623 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 349.0
MMS3_k127_315864_9 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 307.0
MMS3_k127_3221420_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 1.603e-221 692.0
MMS3_k127_3221420_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 554.0
MMS3_k127_3221420_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 407.0
MMS3_k127_3221420_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 371.0
MMS3_k127_3221420_4 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 359.0
MMS3_k127_3221420_5 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001343 277.0
MMS3_k127_3221420_6 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000000000000515 220.0
MMS3_k127_3221420_7 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000001233 215.0
MMS3_k127_3221420_8 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000005333 117.0
MMS3_k127_3221420_9 STAS domain K07122 - - 0.0000000000000001366 85.0
MMS3_k127_3226933_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 527.0
MMS3_k127_3226933_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 484.0
MMS3_k127_3226933_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 460.0
MMS3_k127_3226933_3 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 442.0
MMS3_k127_3226933_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 370.0
MMS3_k127_3226933_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000001856 117.0
MMS3_k127_3226933_6 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000002451 115.0
MMS3_k127_3231128_0 Amino acid permease K03294 - - 8.664e-204 646.0
MMS3_k127_3231128_1 Oxidoreductase FAD-binding domain protein K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 499.0
MMS3_k127_3231128_2 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 296.0
MMS3_k127_3231128_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000496 245.0
MMS3_k127_3231128_4 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.00000000002398 64.0
MMS3_k127_3248427_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 472.0
MMS3_k127_3248427_1 cytochrome K00413 - - 0.00000000000000001852 89.0
MMS3_k127_3253330_0 PFAM thiamine pyrophosphate K01652 - 2.2.1.6 1.079e-228 712.0
MMS3_k127_3253330_1 PFAM permease YjgP YjgQ family protein K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 404.0
MMS3_k127_3253330_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003575 263.0
MMS3_k127_3253330_3 Protein of unknown function (DUF3106) - - - 0.000000000002236 72.0
MMS3_k127_3256638_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 1.847e-257 808.0
MMS3_k127_3256638_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 6.128e-216 674.0
MMS3_k127_3256638_2 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 454.0
MMS3_k127_3256638_3 Magnesium chelatase, subunit ChlI K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002771 248.0
MMS3_k127_3256638_4 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000001154 231.0
MMS3_k127_3256638_5 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000001678 186.0
MMS3_k127_3256638_6 TIGRFAM iron-sulfur cluster assembly protein IscA K13628 - - 0.000000000000000000000000000000000000000000000000007818 181.0
MMS3_k127_3256638_7 Iron-sulphur cluster biosynthesis - - - 0.000000000000000000000000000000000000000000000001635 175.0
MMS3_k127_3256638_8 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.000000000000000000000000000426 116.0
MMS3_k127_3259062_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1539.0
MMS3_k127_3259062_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 4.146e-274 863.0
MMS3_k127_3259062_10 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000003816 198.0
MMS3_k127_3259062_11 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000333 166.0
MMS3_k127_3259062_13 - - - - 0.0000000000000002558 83.0
MMS3_k127_3259062_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 1.224e-223 702.0
MMS3_k127_3259062_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 544.0
MMS3_k127_3259062_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 415.0
MMS3_k127_3259062_5 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 389.0
MMS3_k127_3259062_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 332.0
MMS3_k127_3259062_7 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 286.0
MMS3_k127_3259062_8 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000003505 242.0
MMS3_k127_3259062_9 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000003113 227.0
MMS3_k127_3288317_0 PLD-like domain - - - 4.818e-245 771.0
MMS3_k127_3288317_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001195 297.0
MMS3_k127_3288317_2 transcription factor binding - - - 0.0000000000000000000000000000000000000000000000000000000001264 206.0
MMS3_k127_3288317_3 small GTP-binding protein K06945 - - 0.00000000000000000000000000000000000000000000000004116 186.0
MMS3_k127_3288317_4 Belongs to the low molecular weight phosphotyrosine protein phosphatase family - - - 0.00000000002665 64.0
MMS3_k127_3288317_5 - - - - 0.0000000265 61.0
MMS3_k127_3288317_6 - - - - 0.00000009356 60.0
MMS3_k127_3306563_0 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000005509 209.0
MMS3_k127_3306563_1 - - - - 0.000001941 61.0
MMS3_k127_3321131_0 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 3.085e-320 991.0
MMS3_k127_3321131_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 388.0
MMS3_k127_3321131_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 327.0
MMS3_k127_3321131_3 TIGRFAM periplasmic protein thiol disulphide oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004885 243.0
MMS3_k127_3321131_4 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000003606 216.0
MMS3_k127_3321131_5 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000001045 197.0
MMS3_k127_3321131_6 Cytochrome C biogenesis protein K02200 - - 0.00000000000000000000000000000000000000000000000007778 182.0
MMS3_k127_3321131_7 TIGRFAM cytochrome c-type biogenesis protein CcmI K02200 - - 0.0000000000000000000009582 95.0
MMS3_k127_3321131_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.00000000001892 65.0
MMS3_k127_3349599_0 Sugar (and other) transporter - - - 1.235e-202 643.0
MMS3_k127_3349599_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 546.0
MMS3_k127_3349599_2 Bifunctional protein RfaE, domain I K21344 - 2.7.1.167 0.000000000000000000000000000000000000000000000000000001374 195.0
MMS3_k127_3349599_3 Belongs to the 'phage' integrase family - - - 0.00000000003128 64.0
MMS3_k127_3353972_0 Glycosyl hydrolases family 6 K19668 - 3.2.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 457.0
MMS3_k127_3353972_1 'Cold-shock' DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000398 215.0
MMS3_k127_3353972_3 - - - - 0.00000000005144 68.0
MMS3_k127_3354245_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 515.0
MMS3_k127_3354245_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 337.0
MMS3_k127_3354245_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000004916 234.0
MMS3_k127_3354245_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000004238 182.0
MMS3_k127_3355754_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.756e-224 719.0
MMS3_k127_3355754_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 576.0
MMS3_k127_3355754_2 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 479.0
MMS3_k127_3355754_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000002829 125.0
MMS3_k127_3359423_0 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000007302 206.0
MMS3_k127_3359423_1 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000292 193.0
MMS3_k127_3359423_2 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000002518 127.0
MMS3_k127_3359423_3 HTH domain - - - 0.0000000000000000000000000003158 114.0
MMS3_k127_3359423_4 - - - - 0.000000000001557 74.0
MMS3_k127_3359423_5 Transcriptional regulator - - - 0.00000001374 62.0
MMS3_k127_3360272_0 extracellular alpha-helical protein K06894 - - 0.0 1956.0
MMS3_k127_3360272_1 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 4.465e-210 676.0
MMS3_k127_3360272_2 PFAM CHAD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 482.0
MMS3_k127_3360272_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 337.0
MMS3_k127_3368627_0 PFAM Xylulose 5-phosphate Fructose 6-phosphate phosphoketolase, N-terminal K01621 GO:0003674,GO:0003824,GO:0008150,GO:0009758 4.1.2.22,4.1.2.9 0.0 1395.0
MMS3_k127_3368627_1 Amino acid permease - - - 4.893e-255 801.0
MMS3_k127_3368627_2 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 548.0
MMS3_k127_3368627_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 479.0
MMS3_k127_3368627_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 342.0
MMS3_k127_3368627_5 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000000000000000000000006521 121.0
MMS3_k127_3377429_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1804.0
MMS3_k127_3377429_1 PFAM peptidase S1 and S6 chymotrypsin Hap K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 539.0
MMS3_k127_3377429_10 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000000000000000003534 126.0
MMS3_k127_3377429_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000000001439 121.0
MMS3_k127_3377429_12 - - - - 0.00000000000000000000003164 104.0
MMS3_k127_3377429_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000002603 78.0
MMS3_k127_3377429_2 4 iron, 4 sulfur cluster binding K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 475.0
MMS3_k127_3377429_3 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 383.0
MMS3_k127_3377429_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 354.0
MMS3_k127_3377429_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 291.0
MMS3_k127_3377429_6 Sulfate permease family K03321 - - 0.00000000000000000000000000000000000000000000000000000008406 198.0
MMS3_k127_3377429_7 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000001409 184.0
MMS3_k127_3377429_8 HIT domain K02503 - - 0.000000000000000000000000000000000000000000000002106 176.0
MMS3_k127_3377429_9 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000008071 140.0
MMS3_k127_3378010_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.974e-258 796.0
MMS3_k127_3378010_1 DJ-1/PfpI family K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000001811 254.0
MMS3_k127_3378010_2 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000005666 211.0
MMS3_k127_3378010_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000008787 212.0
MMS3_k127_3389398_0 K+ potassium transporter K03549 - - 3.056e-250 786.0
MMS3_k127_3389398_1 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 1.309e-199 628.0
MMS3_k127_3389398_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 493.0
MMS3_k127_3389398_3 TIGRFAM Na H antiporter, bacterial form K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 458.0
MMS3_k127_3389398_4 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 431.0
MMS3_k127_3389398_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002089 241.0
MMS3_k127_3389398_6 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000006054 155.0
MMS3_k127_3389398_7 - - - - 0.0000000000000000000002736 107.0
MMS3_k127_3450366_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1182.0
MMS3_k127_3450366_1 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 516.0
MMS3_k127_3450366_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 457.0
MMS3_k127_3450366_3 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000004146 238.0
MMS3_k127_3450366_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000003604 235.0
MMS3_k127_3450366_5 Zinc-finger domain - - - 0.000000000000000000000001276 107.0
MMS3_k127_3450366_6 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0000001331 55.0
MMS3_k127_3456171_0 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009644 277.0
MMS3_k127_3456171_1 DNA polymerase III, alpha subunit K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000007048 270.0
MMS3_k127_3456171_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000005006 130.0
MMS3_k127_3481229_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 377.0
MMS3_k127_3481229_1 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000003667 147.0
MMS3_k127_3481229_2 - - - - 0.000000000000000000000000006797 115.0
MMS3_k127_3494887_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 3.172e-206 644.0
MMS3_k127_3494887_1 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000292 115.0
MMS3_k127_3494937_0 Insulinase (Peptidase family M16) K07263 - - 1.167e-304 962.0
MMS3_k127_3494937_1 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 8.529e-210 678.0
MMS3_k127_3494937_2 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000000000006399 232.0
MMS3_k127_3494937_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000007659 219.0
MMS3_k127_3494937_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000002269 84.0
MMS3_k127_3503548_0 PFAM AICARFT IMPCHase bienzyme formylation region K00602 - 2.1.2.3,3.5.4.10 8.806e-291 900.0
MMS3_k127_3503548_1 PFAM Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945 - 6.3.4.13 6.459e-231 719.0
MMS3_k127_3503548_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 557.0
MMS3_k127_3503548_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 528.0
MMS3_k127_3503548_4 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 449.0
MMS3_k127_3503548_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000002395 259.0
MMS3_k127_3503548_6 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000008989 254.0
MMS3_k127_3503548_7 Domain of unknown function DUF21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007286 243.0
MMS3_k127_3503548_8 Bacterial regulatory protein, Fis family K03557 - - 0.0000000000000000000000000000000003563 132.0
MMS3_k127_3523359_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1033.0
MMS3_k127_3523359_1 PFAM tRNA synthetase class II (D K and N) K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 532.0
MMS3_k127_3523359_2 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 291.0
MMS3_k127_3523359_3 Protein of unknown function (DUF2892) - - - 0.00000000000000000000189 95.0
MMS3_k127_352617_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 486.0
MMS3_k127_3558013_0 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009761 421.0
MMS3_k127_3558013_1 Short-chain dehydrogenase reductase (SDR) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 366.0
MMS3_k127_3558013_2 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000000000000008 194.0
MMS3_k127_3558013_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000002287 148.0
MMS3_k127_3558013_4 - - - - 0.0000000000000000001343 90.0
MMS3_k127_3570953_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 6.645e-226 721.0
MMS3_k127_3570953_1 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 0.00000000000000000000000008817 109.0
MMS3_k127_3573840_0 fad dependent oxidoreductase K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 539.0
MMS3_k127_3573840_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009046 319.0
MMS3_k127_3576282_0 Resistance to Hg(2 ) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) K00520 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 437.0
MMS3_k127_3576282_1 MerT mercuric transport protein K08363 - - 0.0000000000000000000000000000000000000000000000000000006367 194.0
MMS3_k127_3576282_2 MerR family transcriptional regulator K08365 - - 0.000000000000000000000000000000000000000000000000000009071 192.0
MMS3_k127_3576282_3 MerC mercury resistance protein K19058 - - 0.00000000000000000000000000000000000000000000002406 174.0
MMS3_k127_3576282_4 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.000000000000000000000000009001 118.0
MMS3_k127_3586271_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001055 275.0
MMS3_k127_3586271_1 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000006132 229.0
MMS3_k127_3620302_0 Adenylate cyclase - - - 0.0000000000000000000000000005645 118.0
MMS3_k127_3620302_1 - - - - 0.00000000000000000009842 102.0
MMS3_k127_3620302_2 - - - - 0.0000000000000001507 89.0
MMS3_k127_3620302_3 - - - - 0.00001286 54.0
MMS3_k127_3639155_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 560.0
MMS3_k127_3639155_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001085 256.0
MMS3_k127_3639155_2 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000007371 231.0
MMS3_k127_3639155_3 Hsp20/alpha crystallin family - - - 0.0000000000000000000000000000000000000000000000000006307 186.0
MMS3_k127_3639155_4 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000000001395 113.0
MMS3_k127_3639155_5 Copper chaperone PCu(A)C K09796 - - 0.00000000005505 70.0
MMS3_k127_3640750_0 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 596.0
MMS3_k127_3640750_1 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 552.0
MMS3_k127_3640750_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 479.0
MMS3_k127_3640750_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002371 255.0
MMS3_k127_3640750_4 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000002605 250.0
MMS3_k127_3640750_5 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000008318 160.0
MMS3_k127_3640750_6 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000832 98.0
MMS3_k127_3648768_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.138e-206 647.0
MMS3_k127_3648768_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 301.0
MMS3_k127_3648768_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 288.0
MMS3_k127_3648768_3 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004868 259.0
MMS3_k127_3648768_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000001317 220.0
MMS3_k127_3648768_5 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000000000961 182.0
MMS3_k127_3648768_6 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000004935 164.0
MMS3_k127_3648768_7 Ribosomal protein L30p/L7e K02907 - - 0.0000000000000000000000000001199 115.0
MMS3_k127_3648768_8 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000006196 94.0
MMS3_k127_3651585_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1238.0
MMS3_k127_3651585_1 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000242 186.0
MMS3_k127_3651585_2 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000005896 170.0
MMS3_k127_3653063_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 4.116e-224 706.0
MMS3_k127_3653063_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 385.0
MMS3_k127_3653063_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 334.0
MMS3_k127_3653063_3 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 324.0
MMS3_k127_3653063_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000005071 158.0
MMS3_k127_3653063_5 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000001334 100.0
MMS3_k127_3666820_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 505.0
MMS3_k127_3666820_1 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 411.0
MMS3_k127_3666820_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 343.0
MMS3_k127_3676646_0 PFAM EAL domain protein - - - 3.142e-225 722.0
MMS3_k127_3676646_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 377.0
MMS3_k127_3676646_2 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 377.0
MMS3_k127_3676646_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 353.0
MMS3_k127_3676646_4 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 339.0
MMS3_k127_3676646_5 Acyl carrier protein phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003228 275.0
MMS3_k127_3676646_6 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000004071 133.0
MMS3_k127_3706159_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.148e-229 723.0
MMS3_k127_3706159_1 Histidine kinase K02484,K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 436.0
MMS3_k127_3706159_2 response regulator K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 357.0
MMS3_k127_3706159_3 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000009459 147.0
MMS3_k127_3706159_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000004804 98.0
MMS3_k127_3706582_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 514.0
MMS3_k127_3706582_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000007675 163.0
MMS3_k127_3714010_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 516.0
MMS3_k127_3714010_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000005563 239.0
MMS3_k127_3714010_2 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000000000000000000008495 207.0
MMS3_k127_3714010_3 Sh3 type 3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000005162 211.0
MMS3_k127_3731500_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.679e-307 949.0
MMS3_k127_3733127_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 8.028e-229 718.0
MMS3_k127_3733127_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 301.0
MMS3_k127_3739344_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1498.0
MMS3_k127_3739344_1 ATPase (P-type) K01535 - 3.6.3.6 1e-323 1007.0
MMS3_k127_3739344_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 1.191e-201 631.0
MMS3_k127_3739344_3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 282.0
MMS3_k127_3740540_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 6.9e-243 758.0
MMS3_k127_3740540_1 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000002361 203.0
MMS3_k127_3744109_0 Sh3 type 3 domain protein K02450,K12132 - 2.7.11.1 0.00000000000000000000003624 114.0
MMS3_k127_3744109_1 - - - - 0.0000001501 64.0
MMS3_k127_3752120_0 Chloride channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 530.0
MMS3_k127_3752120_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000001152 93.0
MMS3_k127_3762085_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537 - 3.6.3.8 4.033e-276 876.0
MMS3_k127_3762085_1 PFAM Alpha-D-phosphohexomutase, alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 295.0
MMS3_k127_3762085_2 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000008399 143.0
MMS3_k127_3772370_0 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000418 251.0
MMS3_k127_3772370_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004824 245.0
MMS3_k127_3772370_2 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000002837 227.0
MMS3_k127_3776371_0 von Willebrand factor, type A - - - 0.0 1357.0
MMS3_k127_3776371_1 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 9.021e-241 764.0
MMS3_k127_3776371_10 - - - - 0.00000000000000000000000000000000000007005 148.0
MMS3_k127_3776371_11 - - - - 0.00000000000000000000000000000000001982 139.0
MMS3_k127_3776371_12 - - - - 0.0000000000000000000000000000000002695 134.0
MMS3_k127_3776371_13 - - - - 0.00000000000000000000000001782 113.0
MMS3_k127_3776371_2 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 522.0
MMS3_k127_3776371_3 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 439.0
MMS3_k127_3776371_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 372.0
MMS3_k127_3776371_5 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 323.0
MMS3_k127_3776371_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000008135 261.0
MMS3_k127_3776371_7 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008355 262.0
MMS3_k127_3776371_8 - - - - 0.000000000000000000000000000000000000000000000000000000001963 205.0
MMS3_k127_3776371_9 - - - - 0.000000000000000000000000000000000000000000612 158.0
MMS3_k127_379033_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.531e-263 827.0
MMS3_k127_379033_1 Sugar (and other) transporter - - - 2.322e-203 640.0
MMS3_k127_379033_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 582.0
MMS3_k127_379033_3 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 424.0
MMS3_k127_379033_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 425.0
MMS3_k127_379033_5 LysR family transcription regulator protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 354.0
MMS3_k127_379033_6 pyridoxamine 5-phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 289.0
MMS3_k127_379033_7 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000001397 233.0
MMS3_k127_379033_8 Membrane K15977 - - 0.000000000000000000000000000000000000000000000003797 175.0
MMS3_k127_379033_9 spectrin binding - - - 0.000000000000000000001257 101.0
MMS3_k127_379140_0 DHH family K07462 - - 1.154e-206 650.0
MMS3_k127_379140_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 577.0
MMS3_k127_379140_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 528.0
MMS3_k127_379140_3 PFAM tRNA synthetase class II (D K and N) K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 487.0
MMS3_k127_3792533_0 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000002613 203.0
MMS3_k127_3792533_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000002998 198.0
MMS3_k127_3796182_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 495.0
MMS3_k127_3796182_1 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 430.0
MMS3_k127_3796182_2 PFAM Helix-turn-helix, type 11 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001467 259.0
MMS3_k127_3796182_3 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003405 257.0
MMS3_k127_380220_0 recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 402.0
MMS3_k127_380220_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000001163 217.0
MMS3_k127_3804593_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 4.394e-201 638.0
MMS3_k127_3804593_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 538.0
MMS3_k127_3804593_2 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 507.0
MMS3_k127_3804593_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 395.0
MMS3_k127_3804593_4 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 314.0
MMS3_k127_3804593_5 diol metabolic process K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000000000611 186.0
MMS3_k127_3804593_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000001917 181.0
MMS3_k127_3804593_7 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000009758 173.0
MMS3_k127_3811977_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 336.0
MMS3_k127_3811977_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 336.0
MMS3_k127_3811977_2 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 291.0
MMS3_k127_3811977_3 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000002061 251.0
MMS3_k127_38228_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.01e-202 634.0
MMS3_k127_38228_1 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 469.0
MMS3_k127_3844043_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 460.0
MMS3_k127_3844043_1 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000004186 194.0
MMS3_k127_3844043_2 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000009067 98.0
MMS3_k127_3852532_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 5.304e-269 842.0
MMS3_k127_3852532_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 440.0
MMS3_k127_3852532_2 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009081 244.0
MMS3_k127_3852532_3 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000008932 175.0
MMS3_k127_3853152_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0 1090.0
MMS3_k127_3853152_1 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 1.046e-215 673.0
MMS3_k127_3853152_10 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000000000000001722 123.0
MMS3_k127_3853152_2 PFAM AIR synthase related protein domain protein K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 582.0
MMS3_k127_3853152_3 PFAM cobalamin synthesis protein P47K K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 423.0
MMS3_k127_3853152_4 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 405.0
MMS3_k127_3853152_5 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 312.0
MMS3_k127_3853152_6 Ni,Fe-hydrogenase I large subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004077 290.0
MMS3_k127_3853152_7 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007044 256.0
MMS3_k127_3853152_8 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000111 154.0
MMS3_k127_3853152_9 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000000000002946 138.0
MMS3_k127_3855749_0 TIGRFAM outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 492.0
MMS3_k127_3857827_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 2.861e-320 984.0
MMS3_k127_3857827_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 2.581e-245 761.0
MMS3_k127_3857827_2 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 476.0
MMS3_k127_3857827_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 432.0
MMS3_k127_3857827_4 Outer membrane protein V K07274 - - 0.000000000000000000000000000000000000000000000000000001479 201.0
MMS3_k127_3857827_5 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.0000000000000000000000000000000000005436 144.0
MMS3_k127_3857827_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000000002259 123.0
MMS3_k127_3877624_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 485.0
MMS3_k127_3877624_1 PFAM Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 343.0
MMS3_k127_3877624_2 Methyltransferase domain K00598 - 2.1.1.144 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 302.0
MMS3_k127_3877723_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1033.0
MMS3_k127_3877723_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 5.151e-287 898.0
MMS3_k127_3877723_10 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000271 269.0
MMS3_k127_3877723_11 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002058 256.0
MMS3_k127_3877723_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003601 239.0
MMS3_k127_3877723_13 Frataxin-like domain K06202 - - 0.0000000000000000000000000000000000000002919 151.0
MMS3_k127_3877723_14 PFAM Excinuclease ABC C subunit domain protein K07461 - - 0.00000000000000000000000000007636 121.0
MMS3_k127_3877723_2 AsmA family K07289 - - 2.853e-213 684.0
MMS3_k127_3877723_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 602.0
MMS3_k127_3877723_4 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 572.0
MMS3_k127_3877723_5 endonuclease III K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 477.0
MMS3_k127_3877723_6 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 392.0
MMS3_k127_3877723_7 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 347.0
MMS3_k127_3877723_8 Belongs to the GbsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 347.0
MMS3_k127_3877723_9 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 291.0
MMS3_k127_3878873_0 COG4974 Site-specific recombinase XerD K04763 GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 350.0
MMS3_k127_3878873_1 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 337.0
MMS3_k127_3878873_2 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000007607 190.0
MMS3_k127_3878873_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000007687 158.0
MMS3_k127_3878873_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000004566 59.0
MMS3_k127_3878873_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000185 46.0
MMS3_k127_388447_0 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 501.0
MMS3_k127_388447_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 289.0
MMS3_k127_388447_2 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000001642 189.0
MMS3_k127_388447_3 Domain of unknown function (DUF4149) - - - 0.0000000000000000000000000009157 118.0
MMS3_k127_388447_4 LysR substrate binding domain - - - 0.000000000000003382 76.0
MMS3_k127_388447_5 Pfam Ankyrin K10799 - 2.4.2.30 0.000297 51.0
MMS3_k127_3891870_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 499.0
MMS3_k127_3891870_1 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 319.0
MMS3_k127_3891870_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000007999 211.0
MMS3_k127_3891870_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000001286 216.0
MMS3_k127_3891870_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000000000000008017 201.0
MMS3_k127_3892236_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 448.0
MMS3_k127_3892236_1 Transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 406.0
MMS3_k127_3892236_2 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 395.0
MMS3_k127_3892236_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002674 271.0
MMS3_k127_3892236_4 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.00000000000000000002712 92.0
MMS3_k127_3909925_0 His Kinase A (phosphoacceptor) domain - - - 8.595e-206 686.0
MMS3_k127_3909925_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 547.0
MMS3_k127_3909925_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 482.0
MMS3_k127_3909925_3 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002258 275.0
MMS3_k127_3909925_4 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000001612 240.0
MMS3_k127_3909925_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000003207 136.0
MMS3_k127_3909925_6 - - - - 0.0000000000000000000000001919 113.0
MMS3_k127_3909925_7 Chemoreceptor zinc-binding domain - - - 0.000000000001762 73.0
MMS3_k127_3909925_9 SMI1 KNR4 family protein - - - 0.000456 50.0
MMS3_k127_392893_0 Domain of unknown function (DUF3400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 356.0
MMS3_k127_392893_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 293.0
MMS3_k127_392893_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000003856 174.0
MMS3_k127_392893_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000001464 171.0
MMS3_k127_392893_4 Prokaryotic cytochrome b561 - - - 0.000000000000000000000005395 109.0
MMS3_k127_3931479_0 MotA TolQ ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 458.0
MMS3_k127_3931479_1 flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 327.0
MMS3_k127_3931479_2 COG2885 outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.000000000000000002955 91.0
MMS3_k127_3958354_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 5.973e-195 616.0
MMS3_k127_3958354_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 364.0
MMS3_k127_3958354_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 310.0
MMS3_k127_3958354_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 296.0
MMS3_k127_3958354_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000005209 179.0
MMS3_k127_3958354_5 membrane protein domain - - - 0.00000000000000000000000000000000000009476 154.0
MMS3_k127_3958636_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1291.0
MMS3_k127_3958636_1 PFAM sigma-54 factor interaction domain-containing protein K06714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 453.0
MMS3_k127_3958636_3 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000001335 64.0
MMS3_k127_3958649_0 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 531.0
MMS3_k127_3964510_0 Outer membrane usher protein K07347 - - 3.747e-229 734.0
MMS3_k127_3964510_1 Soluble lytic murein transglycosylase L domain K08309 - - 2.988e-212 678.0
MMS3_k127_3964510_2 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 3.218e-195 616.0
MMS3_k127_3964510_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 499.0
MMS3_k127_3964510_4 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 312.0
MMS3_k127_3964510_5 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 280.0
MMS3_k127_3964510_6 Pili and flagellar-assembly chaperone, PapD N-terminal domain K07346 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001333 265.0
MMS3_k127_3964510_7 - - - - 0.0000000006467 66.0
MMS3_k127_3964510_8 Spore Coat Protein U domain - - - 0.0003862 52.0
MMS3_k127_3966082_0 aminoacyl-histidine dipeptidase K01270 - - 2.098e-215 678.0
MMS3_k127_3966082_1 - - - - 0.0000000000000000000000004671 108.0
MMS3_k127_3966082_2 diguanylate cyclase - - - 0.000000000000000001638 92.0
MMS3_k127_3969594_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.286e-279 882.0
MMS3_k127_3969594_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K18356 - 1.2.1.58,1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 505.0
MMS3_k127_3982590_0 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001366 277.0
MMS3_k127_3982590_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003887 261.0
MMS3_k127_3982590_2 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000005515 169.0
MMS3_k127_3982590_3 - - - - 0.0000000000000025 83.0
MMS3_k127_3982590_4 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.00000001178 61.0
MMS3_k127_4002238_0 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000006474 235.0
MMS3_k127_4002238_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772,K03815 - 2.4.2.28 0.0000000000000000000000000000000000002705 141.0
MMS3_k127_4022204_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.185e-251 783.0
MMS3_k127_4022204_1 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 517.0
MMS3_k127_4022204_2 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 372.0
MMS3_k127_4022204_3 protein conserved in bacteria K03690 - - 0.000000000000000000000000000000000000000000000000000000000001888 217.0
MMS3_k127_4022204_4 PFAM import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000008365 106.0
MMS3_k127_4022204_5 Cyd operon protein YbgT K00424 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 0.0000000001804 61.0
MMS3_k127_402375_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.732e-235 732.0
MMS3_k127_402375_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.431e-220 692.0
MMS3_k127_402375_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 565.0
MMS3_k127_402375_3 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 438.0
MMS3_k127_402375_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 359.0
MMS3_k127_402375_5 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 304.0
MMS3_k127_402375_6 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000002887 138.0
MMS3_k127_402375_7 - - - - 0.00000000000000000000000000004509 124.0
MMS3_k127_402375_8 - - - - 0.0000000000000000000000000005549 115.0
MMS3_k127_402375_9 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000001044 113.0
MMS3_k127_4026585_0 Outer membrane lipoprotein-sorting protein K07003 - - 4.763e-228 730.0
MMS3_k127_4026585_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.743e-207 649.0
MMS3_k127_4026585_2 Outer membrane lipoprotein-sorting protein K07003 - - 0.000000000000000000000000000000000000004183 151.0
MMS3_k127_4026585_3 Transcriptional regulator - - - 0.00000000000000000000002326 108.0
MMS3_k127_4027253_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.956e-299 920.0
MMS3_k127_4027253_1 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 464.0
MMS3_k127_4027253_2 ATPase associated with various cellular activities AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 437.0
MMS3_k127_4027253_3 LysR substrate binding domain K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 426.0
MMS3_k127_4027253_4 membrane - - - 0.000000000000000000000000000000006358 131.0
MMS3_k127_4027253_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000003651 58.0
MMS3_k127_4028902_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000009713 234.0
MMS3_k127_4028902_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000137 127.0
MMS3_k127_4028902_2 ABC transporter C-terminal domain K15738 - - 0.00000000000000000002752 92.0
MMS3_k127_4028902_3 Domain of unknown function (DUF4850) - - - 0.000000000000006501 84.0
MMS3_k127_403779_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 525.0
MMS3_k127_403779_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 511.0
MMS3_k127_403779_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 406.0
MMS3_k127_403779_3 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000000000008565 163.0
MMS3_k127_403779_4 Ribosomal L25p family K02897 - - 0.000000008684 56.0
MMS3_k127_4044085_0 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 430.0
MMS3_k127_4044085_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772,K03815 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 392.0
MMS3_k127_4044085_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 323.0
MMS3_k127_4044085_3 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 308.0
MMS3_k127_4044085_4 Voltage gated chloride channel K03281 - - 0.00000008585 54.0
MMS3_k127_4044361_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 580.0
MMS3_k127_4044361_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 482.0
MMS3_k127_4044361_2 - - - - 0.000000000000000000000000000003587 125.0
MMS3_k127_4044361_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000008381 113.0
MMS3_k127_4056033_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 2.046e-247 766.0
MMS3_k127_4056033_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 401.0
MMS3_k127_4056033_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000008859 99.0
MMS3_k127_4056033_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000002909 70.0
MMS3_k127_4076233_0 Glycoprotease family K14742 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 297.0
MMS3_k127_4076233_1 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000002828 261.0
MMS3_k127_4076233_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000001995 243.0
MMS3_k127_4076233_3 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.00000000000000000000000000000000000003249 146.0
MMS3_k127_4081486_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1085.0
MMS3_k127_4081486_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 1.357e-232 736.0
MMS3_k127_4081486_2 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 470.0
MMS3_k127_4081486_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000005666 186.0
MMS3_k127_4081486_4 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000000001119 161.0
MMS3_k127_4081486_5 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000000000000004061 138.0
MMS3_k127_4083396_0 Beta-ketoacyl synthase, C-terminal domain K09458,K14660 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 591.0
MMS3_k127_4083396_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 554.0
MMS3_k127_4083396_2 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 359.0
MMS3_k127_4083396_3 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0000000000000000000000000000000000000000005151 158.0
MMS3_k127_4083396_4 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000001689 113.0
MMS3_k127_4087885_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 6.345e-281 868.0
MMS3_k127_4087885_1 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 1.397e-199 624.0
MMS3_k127_4087885_2 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 482.0
MMS3_k127_4087885_3 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K18006 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 417.0
MMS3_k127_4087885_4 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K18007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 360.0
MMS3_k127_4087885_5 maturation - - - 0.000000000000000000000000000000000000007994 154.0
MMS3_k127_409171_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 472.0
MMS3_k127_409171_1 PFAM Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000001508 169.0
MMS3_k127_409171_2 PFAM cytochrome c - - - 0.0000000004272 63.0
MMS3_k127_4101098_0 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 550.0
MMS3_k127_4101098_1 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 310.0
MMS3_k127_4101098_2 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004023 282.0
MMS3_k127_4104646_0 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000009821 245.0
MMS3_k127_4104646_1 Diguanylate cyclase - - - 0.00000000000000000000000002375 111.0
MMS3_k127_4104646_2 Tetratricopeptide repeat - - - 0.000000000000000000004805 104.0
MMS3_k127_4104646_3 - - - - 0.000000000000000005636 97.0
MMS3_k127_4104646_4 - - - - 0.00000000000004195 86.0
MMS3_k127_4107153_0 COG2826 Transposase and inactivated derivatives, IS30 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 572.0
MMS3_k127_4107153_1 PFAM metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 377.0
MMS3_k127_4107153_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 334.0
MMS3_k127_4107153_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 296.0
MMS3_k127_4107153_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000006766 205.0
MMS3_k127_4109907_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 554.0
MMS3_k127_4109907_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 463.0
MMS3_k127_4109907_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 421.0
MMS3_k127_4109907_3 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 289.0
MMS3_k127_4109907_4 PFAM PEBP family protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006846 241.0
MMS3_k127_4109907_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000001223 186.0
MMS3_k127_4109907_6 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000001231 177.0
MMS3_k127_4109907_7 Trm112p-like protein K09791 - - 0.0000000000000000801 83.0
MMS3_k127_4128658_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 2e-323 1009.0
MMS3_k127_4128658_1 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 559.0
MMS3_k127_4133288_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 536.0
MMS3_k127_4133288_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 524.0
MMS3_k127_4133288_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 488.0
MMS3_k127_4133288_3 KR domain K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 381.0
MMS3_k127_4133288_4 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000008808 142.0
MMS3_k127_4133288_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000009988 118.0
MMS3_k127_4133288_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000002157 64.0
MMS3_k127_4133288_7 Maf-like protein K06287 - - 0.0000001493 54.0
MMS3_k127_4133905_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 613.0
MMS3_k127_4133905_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 561.0
MMS3_k127_4133905_10 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000007452 75.0
MMS3_k127_4133905_11 periplasmic or secreted lipoprotein - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0032153,GO:0044462,GO:0044464,GO:0071944 - 0.00000000001858 68.0
MMS3_k127_4133905_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00001837 53.0
MMS3_k127_4133905_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 446.0
MMS3_k127_4133905_3 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009345 415.0
MMS3_k127_4133905_4 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000002911 254.0
MMS3_k127_4133905_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000366 252.0
MMS3_k127_4133905_6 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000001455 161.0
MMS3_k127_4133905_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000001431 130.0
MMS3_k127_4133905_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000007204 118.0
MMS3_k127_4133905_9 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000001165 110.0
MMS3_k127_414298_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 439.0
MMS3_k127_414298_1 transport system, permease component K02069 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0015075,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0030003,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0098771 - 0.00000000000000000000000000000000000000000000000000000000000000000000000005478 256.0
MMS3_k127_414298_2 glycyl-tRNA aminoacylation K01879,K14164 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.000003899 48.0
MMS3_k127_4176277_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 391.0
MMS3_k127_4181492_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1212.0
MMS3_k127_4181492_1 Participates in both transcription termination and antitermination K02600 - - 4.964e-214 668.0
MMS3_k127_4181492_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 359.0
MMS3_k127_4181492_3 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 316.0
MMS3_k127_4181492_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000004335 172.0
MMS3_k127_4209541_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.876e-312 965.0
MMS3_k127_4209541_1 Putative diguanylate phosphodiesterase - - - 4.162e-289 927.0
MMS3_k127_4209541_2 Peptidase family U32 C-terminal domain K08303 - - 3.966e-252 781.0
MMS3_k127_4209541_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.31e-206 651.0
MMS3_k127_4209541_4 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 501.0
MMS3_k127_4209541_5 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 398.0
MMS3_k127_4209541_6 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000000000000000000000002005 168.0
MMS3_k127_421313_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 584.0
MMS3_k127_421313_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 366.0
MMS3_k127_421313_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000005217 262.0
MMS3_k127_4230339_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1061.0
MMS3_k127_4230339_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 2.449e-194 610.0
MMS3_k127_4230339_2 Sulfate permease family K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 588.0
MMS3_k127_4256831_0 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001046 283.0
MMS3_k127_4256831_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046421,GO:0046459,GO:0046872,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000001733 235.0
MMS3_k127_4256831_3 DNA-templated transcription, initiation K03088 - - 0.0000002959 56.0
MMS3_k127_427987_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 536.0
MMS3_k127_427987_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 436.0
MMS3_k127_427987_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 346.0
MMS3_k127_427987_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000003277 183.0
MMS3_k127_427987_4 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000006664 68.0
MMS3_k127_4327702_0 glutamine synthetase K01915 - 6.3.1.2 3.841e-278 858.0
MMS3_k127_4327702_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 507.0
MMS3_k127_4327702_2 SMART ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 483.0
MMS3_k127_4327702_3 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 319.0
MMS3_k127_4327702_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006295 227.0
MMS3_k127_4327702_5 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.00000000000000000000000000000000000000000000000006559 181.0
MMS3_k127_4327702_6 Domain of unknown function (DUF4124) - - - 0.00000000000000000003365 102.0
MMS3_k127_4338075_0 glycosyl transferase family 9 K02841,K12982 - - 0.000000000000000000000000000000000000000000000001535 176.0
MMS3_k127_4338075_1 Glycosyltransferase family 9 (heptosyltransferase) K02517 - 2.3.1.241 0.00000000000000000000000000003649 130.0
MMS3_k127_4341121_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 529.0
MMS3_k127_4341121_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 329.0
MMS3_k127_4341121_2 Membrane K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000005879 245.0
MMS3_k127_441507_0 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 617.0
MMS3_k127_441507_1 type II secretion system protein E K02454,K02652,K12276 - - 0.000000000000000000000000000000000000000000001824 168.0
MMS3_k127_458457_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1330.0
MMS3_k127_458457_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0 1092.0
MMS3_k127_458457_10 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 466.0
MMS3_k127_458457_11 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 460.0
MMS3_k127_458457_12 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 423.0
MMS3_k127_458457_13 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 392.0
MMS3_k127_458457_14 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 363.0
MMS3_k127_458457_15 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 357.0
MMS3_k127_458457_16 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001193 282.0
MMS3_k127_458457_17 transcription factor binding - - - 0.000000000000000000000000000000000000000000000006229 175.0
MMS3_k127_458457_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000003658 161.0
MMS3_k127_458457_19 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000008141 158.0
MMS3_k127_458457_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1028.0
MMS3_k127_458457_20 - - - - 0.0000000000000000000000007107 113.0
MMS3_k127_458457_21 Protein of unknown function (DUF2782) - - - 0.000000000000000000006961 97.0
MMS3_k127_458457_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.167e-254 791.0
MMS3_k127_458457_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 6.275e-210 661.0
MMS3_k127_458457_5 Beta-Casp domain K07576 - - 2.698e-203 642.0
MMS3_k127_458457_6 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 509.0
MMS3_k127_458457_7 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 499.0
MMS3_k127_458457_8 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 488.0
MMS3_k127_458457_9 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 490.0
MMS3_k127_469637_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 443.0
MMS3_k127_469637_1 pteridine-dependent deoxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 308.0
MMS3_k127_469637_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000001056 218.0
MMS3_k127_469637_3 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000005016 196.0
MMS3_k127_469637_4 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000006323 130.0
MMS3_k127_486912_0 Diguanylate cyclase with pas pac and gaf sensors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 314.0
MMS3_k127_486912_1 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001418 250.0
MMS3_k127_486912_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000001415 232.0
MMS3_k127_486912_3 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000000000000000000000000000000000000000000000003209 214.0
MMS3_k127_486912_4 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000008941 197.0
MMS3_k127_486912_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000003826 90.0
MMS3_k127_489931_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 366.0
MMS3_k127_489931_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000005399 257.0
MMS3_k127_489931_2 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000004494 216.0
MMS3_k127_489931_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000136 219.0
MMS3_k127_489931_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000298 155.0
MMS3_k127_510860_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1170.0
MMS3_k127_52422_0 PFAM polysaccharide biosynthesis protein CapD - - - 1.727e-287 898.0
MMS3_k127_52422_1 Glycosyltransferase Family 4 K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 457.0
MMS3_k127_52422_10 ADP-glyceromanno-heptose 6-epimerase activity K19997,K22320 - 1.1.1.412,5.1.3.26 0.000000000000000000000000000000000000000000000000000000000000000000587 239.0
MMS3_k127_52422_11 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000004464 211.0
MMS3_k127_52422_12 Polysaccharide deacetylase - - - 0.0000000000000000000000000001059 127.0
MMS3_k127_52422_13 Belongs to the DegT DnrJ EryC1 family - - - 0.0004568 49.0
MMS3_k127_52422_2 PFAM Glycosyl transferase, family 4, conserved region K13007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 419.0
MMS3_k127_52422_3 Male sterility protein K00091,K01784 - 1.1.1.219,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 410.0
MMS3_k127_52422_4 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 389.0
MMS3_k127_52422_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 391.0
MMS3_k127_52422_6 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 335.0
MMS3_k127_52422_7 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 322.0
MMS3_k127_52422_8 O-Antigen ligase K02847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001588 284.0
MMS3_k127_52422_9 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001063 251.0
MMS3_k127_525570_0 PFAM aminotransferase class I and II K00842,K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 410.0
MMS3_k127_525570_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001214 280.0
MMS3_k127_525570_2 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004642 252.0
MMS3_k127_526797_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005251 267.0
MMS3_k127_526797_1 DsrC like protein K11179 - - 0.000000000000000000000000001461 116.0
MMS3_k127_526797_3 HD domain K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000002164 97.0
MMS3_k127_526797_4 Protein of unknown function (DUF3460) - - - 0.00001542 50.0
MMS3_k127_539332_0 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 407.0
MMS3_k127_539332_1 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000007481 223.0
MMS3_k127_539332_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000005171 200.0
MMS3_k127_539332_3 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000005097 151.0
MMS3_k127_551020_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 397.0
MMS3_k127_551020_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000275 264.0
MMS3_k127_551020_2 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000002353 146.0
MMS3_k127_551020_3 Chemoreceptor zinc-binding domain - - - 0.0000000000000000000000000000000006751 135.0
MMS3_k127_551020_4 COG3209 Rhs family protein - - - 0.000000000000000000000000009148 111.0
MMS3_k127_553474_0 PFAM Orn Lys Arg decarboxylase major region K01584 - 4.1.1.19 0.0 1023.0
MMS3_k127_553474_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 497.0
MMS3_k127_553474_2 PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 364.0
MMS3_k127_553474_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000003075 247.0
MMS3_k127_553474_4 PFAM peptidase M17 leucyl aminopeptidase domain protein K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000001147 169.0
MMS3_k127_554992_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 384.0
MMS3_k127_554992_1 - - - - 0.000000000000000000000000000000000000000000000000000000000008194 214.0
MMS3_k127_554992_2 - - - - 0.00001077 50.0
MMS3_k127_571207_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1122.0
MMS3_k127_571207_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 6.021e-228 713.0
MMS3_k127_571207_10 PFAM PhoH family protein K06217 - - 0.00001018 53.0
MMS3_k127_571207_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 377.0
MMS3_k127_571207_3 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 357.0
MMS3_k127_571207_4 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 316.0
MMS3_k127_571207_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 303.0
MMS3_k127_571207_6 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 282.0
MMS3_k127_571207_7 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001633 283.0
MMS3_k127_571207_8 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004086 228.0
MMS3_k127_571207_9 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000005492 119.0
MMS3_k127_575054_0 PFAM aminotransferase class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 390.0
MMS3_k127_575054_1 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 356.0
MMS3_k127_575054_2 Protein of unknown function (DUF493) K09158 - - 0.000000000000000000000000000002771 121.0
MMS3_k127_577217_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 9.728e-242 755.0
MMS3_k127_577217_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 7.226e-220 685.0
MMS3_k127_577217_2 TIGRFAM fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 547.0
MMS3_k127_600036_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000343 212.0
MMS3_k127_600036_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000106 173.0
MMS3_k127_600036_2 Putative prokaryotic signal transducing protein - - - 0.00000001375 63.0
MMS3_k127_616809_0 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 550.0
MMS3_k127_616809_1 Elongation factor Tu GTP binding domain K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 484.0
MMS3_k127_616809_2 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein K00381,K00392 - 1.8.1.2,1.8.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175 432.0
MMS3_k127_616809_3 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 342.0
MMS3_k127_642849_0 major facilitator superfamily K03446 - - 1.817e-249 777.0
MMS3_k127_642849_1 PFAM secretion protein HlyD family protein K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 403.0
MMS3_k127_642849_2 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 394.0
MMS3_k127_642849_3 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 385.0
MMS3_k127_642849_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000002104 220.0
MMS3_k127_642849_5 Transcription regulator that can specifically activate or repress expression of target genes K06075 - - 0.00000000000000000000000000000000000000006407 156.0
MMS3_k127_642849_6 Phosphoribosyl transferase domain - - - 0.00000000000000000000274 94.0
MMS3_k127_644139_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 546.0
MMS3_k127_644139_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 455.0
MMS3_k127_644139_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 410.0
MMS3_k127_644139_3 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 387.0
MMS3_k127_644139_4 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 340.0
MMS3_k127_644139_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 314.0
MMS3_k127_644139_6 mechanosensitive - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008478 248.0
MMS3_k127_644139_7 Lysin motif K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000001226 235.0
MMS3_k127_644139_8 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000003855 106.0
MMS3_k127_644139_9 - - - - 0.0000000000005001 74.0
MMS3_k127_644391_0 PFAM ABC transporter related K01990,K09695 - - 2.894e-273 851.0
MMS3_k127_644391_1 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000003485 144.0
MMS3_k127_645596_0 Diguanylate cyclase - - - 1.114e-247 777.0
MMS3_k127_645596_1 MgsA AAA+ ATPase C terminal K07478 - - 2.962e-239 747.0
MMS3_k127_645596_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 6.596e-209 656.0
MMS3_k127_645596_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000126 262.0
MMS3_k127_645596_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000001042 223.0
MMS3_k127_645596_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000042 226.0
MMS3_k127_645596_6 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000001986 187.0
MMS3_k127_645596_7 PFAM EAL domain protein - - - 0.0000000000000000000000002182 123.0
MMS3_k127_656858_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 397.0
MMS3_k127_656858_1 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000013 230.0
MMS3_k127_656858_2 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000003154 208.0
MMS3_k127_656858_3 - - - - 0.0000007764 55.0
MMS3_k127_682994_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1337.0
MMS3_k127_682994_1 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1095.0
MMS3_k127_682994_2 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 1.011e-281 872.0
MMS3_k127_682994_3 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 383.0
MMS3_k127_682994_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001314 277.0
MMS3_k127_694928_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 4.17e-227 709.0
MMS3_k127_694928_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.322e-215 674.0
MMS3_k127_694928_10 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000003921 235.0
MMS3_k127_694928_11 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000001269 201.0
MMS3_k127_694928_12 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000001554 196.0
MMS3_k127_694928_13 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000001474 188.0
MMS3_k127_694928_14 Helix-turn-helix domain K15539 - - 0.0000000000000000000000000000000000003936 156.0
MMS3_k127_694928_2 metal-dependent phosphohydrolase HD sub domain K07814 - - 4.68e-214 676.0
MMS3_k127_694928_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 607.0
MMS3_k127_694928_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 578.0
MMS3_k127_694928_5 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 569.0
MMS3_k127_694928_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 463.0
MMS3_k127_694928_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 361.0
MMS3_k127_694928_8 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 346.0
MMS3_k127_694928_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000001469 244.0
MMS3_k127_70263_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 6.954e-215 674.0
MMS3_k127_70263_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 597.0
MMS3_k127_70263_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 399.0
MMS3_k127_70263_3 Competence-damaged protein K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000003332 202.0
MMS3_k127_70263_4 Putative FMN-binding domain K07734 - - 0.0000000000000000000000000000000000000000000003814 173.0
MMS3_k127_716149_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 585.0
MMS3_k127_716149_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 353.0
MMS3_k127_716149_2 TIGRFAM succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.000000000000000000000000000000000009512 139.0
MMS3_k127_719055_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 464.0
MMS3_k127_719055_1 Major Facilitator Superfamily K08227 - - 0.000000000000000000000000000000000000000000000000007836 184.0
MMS3_k127_763703_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 379.0
MMS3_k127_763703_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000007784 224.0
MMS3_k127_763703_2 gag-polyprotein putative aspartyl protease K06985 - - 0.000000000000007466 78.0
MMS3_k127_76809_0 PFAM glycine cleavage T protein (aminomethyl transferase) K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 414.0
MMS3_k127_76809_1 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002461 250.0
MMS3_k127_76809_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000002354 224.0
MMS3_k127_76809_3 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000000000000000000000000000004567 224.0
MMS3_k127_76809_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000004388 204.0
MMS3_k127_76809_5 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000007086 98.0
MMS3_k127_768091_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 572.0
MMS3_k127_768091_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 476.0
MMS3_k127_768091_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 342.0
MMS3_k127_768091_3 cellulose synthase operon protein YhjU - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001538 286.0
MMS3_k127_768091_4 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000000002231 230.0
MMS3_k127_793305_0 von Willebrand factor, type A - - - 1.501e-300 938.0
MMS3_k127_793305_1 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 8.265e-211 656.0
MMS3_k127_793305_2 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 531.0
MMS3_k127_793305_3 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009156 400.0
MMS3_k127_793305_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 349.0
MMS3_k127_793305_5 Carbonic anhydrase K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 320.0
MMS3_k127_793305_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002518 278.0
MMS3_k127_793305_7 Domain of unknown function (DUF1330) - - - 0.0000000000000000000002405 99.0
MMS3_k127_793305_8 Domain of unknown function (DUF4124) - - - 0.0000000000000000000386 98.0
MMS3_k127_793821_0 protein conserved in bacteria K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 539.0
MMS3_k127_793821_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000005663 220.0
MMS3_k127_793821_2 PFAM Signal transduction response regulator, receiver K13041 - - 0.0000000000000000000000000000000000000000001337 171.0
MMS3_k127_793821_3 cellulose synthase - - - 0.0000000000000000000000000000000000000000002847 163.0
MMS3_k127_793821_5 Protein of unknown function (DUF2905) - - - 0.00000000000000000000002295 100.0
MMS3_k127_797277_0 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 561.0
MMS3_k127_797277_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 398.0
MMS3_k127_797277_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 332.0
MMS3_k127_838880_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 596.0
MMS3_k127_838880_1 Protein of unknown function (DUF560) - - - 0.00000000000000000000000000000000000000000000000000000003626 214.0
MMS3_k127_838880_2 FecR protein - - - 0.0000000000000000000000000005232 124.0
MMS3_k127_864316_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.944e-255 791.0
MMS3_k127_864316_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 4.128e-197 619.0
MMS3_k127_864316_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 395.0
MMS3_k127_864316_3 lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006757 275.0
MMS3_k127_864316_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.00000000000000000002029 92.0
MMS3_k127_86956_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.757e-209 653.0
MMS3_k127_86956_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 409.0
MMS3_k127_87015_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1199.0
MMS3_k127_87015_1 LysR substrate binding domain K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 537.0
MMS3_k127_87015_2 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 421.0
MMS3_k127_87015_3 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 380.0
MMS3_k127_87015_4 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003292 236.0
MMS3_k127_871244_0 CHASE2 K01768 - 4.6.1.1 1.844e-278 867.0
MMS3_k127_871244_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 360.0
MMS3_k127_871244_2 MlaA lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000007763 220.0
MMS3_k127_871244_3 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000002066 150.0
MMS3_k127_871244_4 Bacterial SH3 domain - - - 0.00000000000000000000000000000001258 133.0
MMS3_k127_871244_5 Protein of unknown function (DUF1289) - - - 0.0000000000007098 74.0
MMS3_k127_877293_0 monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 438.0
MMS3_k127_877293_1 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007703 250.0
MMS3_k127_877293_2 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000007495 182.0
MMS3_k127_877442_0 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.0 1232.0
MMS3_k127_877442_1 4Fe-4S binding domain K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 478.0
MMS3_k127_877442_2 DMSO reductase anchor subunit (DmsC) K21309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 454.0
MMS3_k127_877442_3 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 391.0
MMS3_k127_877442_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 297.0
MMS3_k127_877442_5 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004735 245.0
MMS3_k127_877442_6 PFAM UspA domain protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000008958 242.0
MMS3_k127_877442_7 - - - - 0.0000000000000000000000000000005374 127.0
MMS3_k127_877442_8 Sulfurtransferase TusA K04085 - - 0.0000000000000000000000000000461 117.0
MMS3_k127_901855_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.036e-245 767.0
MMS3_k127_901855_1 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 495.0
MMS3_k127_901855_2 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 291.0
MMS3_k127_901855_3 - K19168 - - 0.0000000000000005639 85.0
MMS3_k127_901855_4 NMT1-like family K02051 - - 0.0000008301 60.0
MMS3_k127_91478_0 elongation factor Tu domain 2 protein K06207 - - 0.0 998.0
MMS3_k127_91478_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 404.0
MMS3_k127_91478_2 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 311.0
MMS3_k127_91478_3 Elongation factor Tu GTP binding domain K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000006056 249.0
MMS3_k127_91478_5 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000001573 107.0
MMS3_k127_933431_0 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 454.0
MMS3_k127_933431_1 Cytochrome c-type biogenesis protein Ccs1 ResB K07399 - - 0.0000000000000000000000000000000000001251 145.0
MMS3_k127_960238_0 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 8.386e-268 829.0
MMS3_k127_960238_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 338.0
MMS3_k127_960238_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000003 87.0
MMS3_k127_960238_3 COG0277 FAD FMN-containing dehydrogenases K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000004408 87.0
MMS3_k127_962788_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 531.0
MMS3_k127_962788_1 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 301.0
MMS3_k127_962788_2 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000005169 178.0
MMS3_k127_962788_3 cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.00000000000000000000000000000000763 130.0
MMS3_k127_962788_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000004554 109.0
MMS3_k127_975299_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.06e-247 780.0
MMS3_k127_975299_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005176 454.0
MMS3_k127_975299_10 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000007003 245.0
MMS3_k127_975299_11 SMART CoA-binding domain protein K06929 - - 0.000000000000000000000000000000000000000000000000000000008811 202.0
MMS3_k127_975299_12 Rhodanese domain protein - - - 0.000000000000000000000000000000000000000003248 157.0
MMS3_k127_975299_13 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000002013 148.0
MMS3_k127_975299_14 antisigma factor binding K04749 - - 0.00000000000001111 79.0
MMS3_k127_975299_15 response regulator - - - 0.000000000006547 78.0
MMS3_k127_975299_16 antisigma factor binding K04749 - - 0.0000000003268 66.0
MMS3_k127_975299_17 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.000000001222 59.0
MMS3_k127_975299_2 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 460.0
MMS3_k127_975299_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 431.0
MMS3_k127_975299_4 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 361.0
MMS3_k127_975299_5 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
MMS3_k127_975299_6 TIGRFAM DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 293.0
MMS3_k127_975299_7 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 293.0
MMS3_k127_975299_8 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001706 256.0
MMS3_k127_975299_9 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
MMS3_k127_987296_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 405.0
MMS3_k127_987296_1 Protein of unknown function (DUF1614) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006291 251.0
MMS3_k127_987296_2 Belongs to the ribose-phosphate pyrophosphokinase family K00948 - 2.7.6.1 0.000001356 51.0