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Overview

ID MAG02837
Name MMS3_bin.85
Sample SMP0066
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order UBA6429
Family Thiohalophilaceae
Genus RI-92
Species
Assembly information
Completeness (%) 89.62
Contamination (%) 2.05
GC content (%) 54.0
N50 (bp) 27,867
Genome size (bp) 3,347,474

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3131

Gene name Description KEGG GOs EC E-value Score Sequence
MMS3_k127_1047063_0 DEAD DEAH box K03724 - - 0.0 1451.0
MMS3_k127_1047063_1 UPF0313 protein - - - 0.0 1103.0
MMS3_k127_1047063_10 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 331.0
MMS3_k127_1047063_11 Reduces the stability of FtsZ polymers in the presence of ATP K06916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 321.0
MMS3_k127_1047063_12 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002775 266.0
MMS3_k127_1047063_13 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000003554 269.0
MMS3_k127_1047063_14 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002488 267.0
MMS3_k127_1047063_15 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005289 250.0
MMS3_k127_1047063_16 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000125 223.0
MMS3_k127_1047063_17 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000002738 205.0
MMS3_k127_1047063_18 Peptidyl-prolyl cis-trans K03775 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010467,GO:0016151,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022417,GO:0031647,GO:0035821,GO:0036211,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043963,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044501,GO:0046872,GO:0046914,GO:0050821,GO:0050896,GO:0050897,GO:0051082,GO:0051604,GO:0051701,GO:0051704,GO:0051817,GO:0052027,GO:0052250,GO:0065007,GO:0065008,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000000000139 194.0
MMS3_k127_1047063_19 alpha-ribazole phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000004423 190.0
MMS3_k127_1047063_2 alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 507.0
MMS3_k127_1047063_20 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000001804 187.0
MMS3_k127_1047063_21 ANTAR K22010 - - 0.000000000000000000000000000000000000000000000006465 179.0
MMS3_k127_1047063_22 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000277 177.0
MMS3_k127_1047063_23 PFAM Phosphoglycerate mutase K08296 - - 0.00000000000000000000000000000000000000000001273 167.0
MMS3_k127_1047063_24 Bacterial regulatory proteins, tetR family K03577 - - 0.000000000000000000000000000000000000000000866 163.0
MMS3_k127_1047063_25 - - - - 0.00000000000000000000000000000000000000571 154.0
MMS3_k127_1047063_26 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.00000000000000000000000000000000000004932 150.0
MMS3_k127_1047063_27 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000005097 143.0
MMS3_k127_1047063_28 Thioredoxin - - - 0.000000000000000000000000000000000009156 139.0
MMS3_k127_1047063_29 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000001488 139.0
MMS3_k127_1047063_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 477.0
MMS3_k127_1047063_30 - - - - 0.0000000000000000000000000000000006341 134.0
MMS3_k127_1047063_31 Putative molybdenum carrier - - - 0.00000000000000000000000000000008746 127.0
MMS3_k127_1047063_32 - - - - 0.0000000000000000000000000000001847 135.0
MMS3_k127_1047063_33 SMART Cold shock protein K03704 - - 0.0000000000000000000000000003317 114.0
MMS3_k127_1047063_34 cell redox homeostasis K03671 - - 0.0000000000000000000000000015 122.0
MMS3_k127_1047063_35 - - - - 0.000000000000000000000000002157 124.0
MMS3_k127_1047063_36 SnoaL-like domain - - - 0.000000000000000000000000008727 114.0
MMS3_k127_1047063_37 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000009198 112.0
MMS3_k127_1047063_38 integral membrane protein K07027 - - 0.00000000000000000000211 100.0
MMS3_k127_1047063_39 - - - - 0.0000000000000000002697 92.0
MMS3_k127_1047063_4 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 426.0
MMS3_k127_1047063_42 Protein of unknown function (DUF3106) - - - 0.00000109 58.0
MMS3_k127_1047063_43 - - - - 0.0001109 46.0
MMS3_k127_1047063_45 Putative molybdenum carrier - - - 0.0006215 44.0
MMS3_k127_1047063_46 - - - - 0.0007426 51.0
MMS3_k127_1047063_5 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 416.0
MMS3_k127_1047063_6 PFAM histone deacetylase superfamily K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 411.0
MMS3_k127_1047063_7 UPF0761 membrane protein K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 383.0
MMS3_k127_1047063_8 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070041,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 367.0
MMS3_k127_1047063_9 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 348.0
MMS3_k127_106367_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 4.605e-270 850.0
MMS3_k127_106367_1 MFS transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 421.0
MMS3_k127_106367_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 392.0
MMS3_k127_106367_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 343.0
MMS3_k127_106367_4 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000003199 117.0
MMS3_k127_106367_5 Glutaredoxin - - - 0.000000000000000000001584 102.0
MMS3_k127_106367_6 sulfur carrier activity K04085 - - 0.0000000001202 65.0
MMS3_k127_1087023_0 PFAM Carbamoyltransferase K00612 - - 3.576e-220 696.0
MMS3_k127_1087023_1 Sodium/hydrogen exchanger family K03316 - - 3.141e-208 663.0
MMS3_k127_1087023_10 - - - - 0.0000000000000000000000001319 109.0
MMS3_k127_1087023_11 - - - - 0.00000000000000000006532 94.0
MMS3_k127_1087023_13 PFAM Immunoglobulin I-set domain - - - 0.0000005872 61.0
MMS3_k127_1087023_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 612.0
MMS3_k127_1087023_3 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 400.0
MMS3_k127_1087023_4 sigma54 specific, transcriptional regulator, Fis family K06714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000846 388.0
MMS3_k127_1087023_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000007083 242.0
MMS3_k127_1087023_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000009147 224.0
MMS3_k127_1087023_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000008119 162.0
MMS3_k127_1087023_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000618 132.0
MMS3_k127_1087023_9 Universal stress protein - - - 0.000000000000000000000000001354 120.0
MMS3_k127_1098018_0 - - - - 7.479e-320 987.0
MMS3_k127_1098018_1 Fis Family K02584 - - 1.174e-198 632.0
MMS3_k127_1098018_10 Domain of unknown function (DUF3291) - - - 0.00000000000000000000000000000000000000000000000008635 183.0
MMS3_k127_1098018_11 acetyltransferase - - - 0.0000000000000000000000000000000000002542 145.0
MMS3_k127_1098018_12 EthD domain - - - 0.000000000000000000000000000000000009552 138.0
MMS3_k127_1098018_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000005569 134.0
MMS3_k127_1098018_14 thiolester hydrolase activity - - - 0.00000000000002273 78.0
MMS3_k127_1098018_15 methyltransferase activity - - - 0.0002445 46.0
MMS3_k127_1098018_2 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 579.0
MMS3_k127_1098018_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 356.0
MMS3_k127_1098018_4 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 348.0
MMS3_k127_1098018_5 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 323.0
MMS3_k127_1098018_6 Activator of hsp90 atpase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000006039 220.0
MMS3_k127_1098018_7 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000005741 217.0
MMS3_k127_1098018_8 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000003574 210.0
MMS3_k127_1098018_9 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000001064 211.0
MMS3_k127_1100319_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 4.128e-237 745.0
MMS3_k127_1100319_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 577.0
MMS3_k127_1100319_2 Type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 565.0
MMS3_k127_1100319_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 476.0
MMS3_k127_1100319_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 354.0
MMS3_k127_1100319_5 Thiamine monophosphate synthase K03574 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 299.0
MMS3_k127_1100319_6 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 - 0.0000000000000000000000000000000000000000000000000000000000000002023 231.0
MMS3_k127_1100319_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000001008 192.0
MMS3_k127_1100319_8 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000000008614 91.0
MMS3_k127_1100319_9 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000002726 66.0
MMS3_k127_1116662_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 616.0
MMS3_k127_1116662_1 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 497.0
MMS3_k127_1116662_10 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000001013 243.0
MMS3_k127_1116662_11 COG3103 SH3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000005165 218.0
MMS3_k127_1116662_12 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000003117 203.0
MMS3_k127_1116662_13 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000004053 209.0
MMS3_k127_1116662_14 - - - - 0.000000000000000000000000000000000000000000000000000001878 201.0
MMS3_k127_1116662_15 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000005527 164.0
MMS3_k127_1116662_16 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000003076 148.0
MMS3_k127_1116662_17 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000004332 145.0
MMS3_k127_1116662_18 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000009135 135.0
MMS3_k127_1116662_19 protein conserved in bacteria - - - 0.0000000000000000000000004383 110.0
MMS3_k127_1116662_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 486.0
MMS3_k127_1116662_20 Protein of unknown function (DUF2914) - - - 0.00000000000000000000005019 104.0
MMS3_k127_1116662_21 Domain of unknown function (DUF4266) - - - 0.00000000000000000002463 92.0
MMS3_k127_1116662_22 DNA topological change - - - 0.0000000000000000002959 96.0
MMS3_k127_1116662_23 - - - - 0.000000000001429 72.0
MMS3_k127_1116662_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 458.0
MMS3_k127_1116662_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 334.0
MMS3_k127_1116662_5 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 323.0
MMS3_k127_1116662_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 322.0
MMS3_k127_1116662_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 310.0
MMS3_k127_1116662_8 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007625 245.0
MMS3_k127_1116662_9 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000622 220.0
MMS3_k127_1199700_0 PFAM Alpha amylase, catalytic K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 4e-323 998.0
MMS3_k127_1199700_1 Domain of unknown function (DUF4962) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 357.0
MMS3_k127_1199700_2 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000001661 143.0
MMS3_k127_1199700_3 lipolytic protein G-D-S-L family K01278,K03561,K12287 - 3.4.14.5 0.000000000000006064 90.0
MMS3_k127_1199700_4 Peptidase family C25 - - - 0.00000000000001385 89.0
MMS3_k127_1285674_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.048e-232 751.0
MMS3_k127_1285674_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 438.0
MMS3_k127_1285674_10 protease with the C-terminal PDZ domain - - - 0.0000000000000000009142 90.0
MMS3_k127_1285674_12 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000003186 66.0
MMS3_k127_1285674_13 Fibronectin type 3 domain - - - 0.00000007398 66.0
MMS3_k127_1285674_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 398.0
MMS3_k127_1285674_3 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 372.0
MMS3_k127_1285674_4 Responsible for synthesis of pseudouridine from uracil K06179 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 346.0
MMS3_k127_1285674_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 331.0
MMS3_k127_1285674_6 subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001124 274.0
MMS3_k127_1285674_7 low molecular weight K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000002258 228.0
MMS3_k127_1285674_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000009749 209.0
MMS3_k127_1285674_9 - - - - 0.0000000000000000000000000000000000000000001084 165.0
MMS3_k127_1294170_0 Sucrose phosphate synthase, sucrose phosphatase-like K00696 - 2.4.1.14 4.172e-291 910.0
MMS3_k127_1294170_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.073e-260 819.0
MMS3_k127_1294170_10 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 345.0
MMS3_k127_1294170_11 EXOIII K02342,K14159 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 310.0
MMS3_k127_1294170_12 TIGRFAM HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002632 283.0
MMS3_k127_1294170_13 Extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000369 258.0
MMS3_k127_1294170_14 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000003751 245.0
MMS3_k127_1294170_15 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000002869 223.0
MMS3_k127_1294170_16 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.00000000000000000000000000008979 121.0
MMS3_k127_1294170_17 GGDEF domain K01768,K02282,K02488,K07676,K10715,K20976 GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009927,GO:0009987,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0031224,GO:0031226,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3,2.7.7.65,4.6.1.1 0.000000001453 63.0
MMS3_k127_1294170_18 - - - - 0.000000001509 59.0
MMS3_k127_1294170_2 Extracellular solute-binding protein - - - 9.334e-223 701.0
MMS3_k127_1294170_3 Alkaline and neutral invertase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 566.0
MMS3_k127_1294170_4 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 566.0
MMS3_k127_1294170_5 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 522.0
MMS3_k127_1294170_6 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 513.0
MMS3_k127_1294170_7 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 510.0
MMS3_k127_1294170_8 Oligopeptide transport system permease protein OppB K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 473.0
MMS3_k127_1294170_9 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923 415.0
MMS3_k127_1299844_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 424.0
MMS3_k127_1299844_1 Rubredoxin K05297 - 1.18.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004614 408.0
MMS3_k127_1299844_2 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
MMS3_k127_1299844_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000822 278.0
MMS3_k127_1299844_4 Domain of unknown function DUF302 - - - 0.00000000000000000000000000002806 121.0
MMS3_k127_1324321_0 Belongs to the peptidase M16 family K07263 - - 7.332e-297 936.0
MMS3_k127_1324321_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.188e-217 680.0
MMS3_k127_1324321_10 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000006425 259.0
MMS3_k127_1324321_11 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006683 252.0
MMS3_k127_1324321_12 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001181 244.0
MMS3_k127_1324321_13 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000001547 221.0
MMS3_k127_1324321_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000007271 156.0
MMS3_k127_1324321_15 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000002378 156.0
MMS3_k127_1324321_16 - - - - 0.000000000000000000000000000000003776 132.0
MMS3_k127_1324321_17 Bacterial Fe(2+) trafficking - - - 0.0000000000000000000000000000000406 128.0
MMS3_k127_1324321_18 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000000000499 129.0
MMS3_k127_1324321_19 PFAM PhoH family protein K06217 - - 0.000000000000000000000000000006302 121.0
MMS3_k127_1324321_2 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 2.617e-201 633.0
MMS3_k127_1324321_20 - - - - 0.0000000000000000000000000006005 123.0
MMS3_k127_1324321_21 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000000117 117.0
MMS3_k127_1324321_22 - - - - 0.000000002107 64.0
MMS3_k127_1324321_3 Belongs to the UPF0061 (SELO) family - - - 2.665e-201 638.0
MMS3_k127_1324321_4 PFAM Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 555.0
MMS3_k127_1324321_5 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 342.0
MMS3_k127_1324321_6 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 321.0
MMS3_k127_1324321_7 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 292.0
MMS3_k127_1324321_8 MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002213 285.0
MMS3_k127_1324321_9 Nudix N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001061 258.0
MMS3_k127_1348456_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.32e-222 695.0
MMS3_k127_1348456_1 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.431e-197 624.0
MMS3_k127_1348456_10 Uncharacterized protein conserved in bacteria (DUF2314) - - - 0.00000000000000000000000000000000000000000009647 167.0
MMS3_k127_1348456_11 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000009895 153.0
MMS3_k127_1348456_12 Protein of unknown function DUF58 - - - 0.00000000000000000000000000009967 128.0
MMS3_k127_1348456_13 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000001789 121.0
MMS3_k127_1348456_14 PFAM glycosyl transferase group 1 - - - 0.000000000000001146 89.0
MMS3_k127_1348456_15 metallocarboxypeptidase activity - - - 0.000000000000004917 88.0
MMS3_k127_1348456_2 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 591.0
MMS3_k127_1348456_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 544.0
MMS3_k127_1348456_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 405.0
MMS3_k127_1348456_5 Amino Acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 391.0
MMS3_k127_1348456_6 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 362.0
MMS3_k127_1348456_7 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 304.0
MMS3_k127_1348456_8 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 305.0
MMS3_k127_1348456_9 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000003759 196.0
MMS3_k127_1475868_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.0 1075.0
MMS3_k127_1475868_1 lysine 2,3-aminomutase activity - - - 2.21e-212 676.0
MMS3_k127_1475868_10 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008567 283.0
MMS3_k127_1475868_12 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002397 228.0
MMS3_k127_1475868_13 - - - - 0.000000000000000000000000000000000000000000000000000000004183 205.0
MMS3_k127_1475868_14 undecaprenyl-phosphate glucose phosphotransferase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000007123 203.0
MMS3_k127_1475868_15 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000007698 185.0
MMS3_k127_1475868_16 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K14331 - 4.1.99.5 0.0000000000000000000000000000000000000000000000009587 190.0
MMS3_k127_1475868_17 transcriptional regulator K16137 - - 0.00000000000000000000000000000000000000000003616 168.0
MMS3_k127_1475868_18 Domain of unknown function (DUF4350) - - - 0.00000000000000000000000000000000000000002144 167.0
MMS3_k127_1475868_19 Protein of unknown function (DUF805) - - - 0.0000000000000000000000000000003959 129.0
MMS3_k127_1475868_2 Type III effector Hrp-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 589.0
MMS3_k127_1475868_20 protein conserved in bacteria - - - 0.000000000000000000000000002641 116.0
MMS3_k127_1475868_21 heptosyltransferase K02843 - - 0.0000000000000000000000000761 111.0
MMS3_k127_1475868_3 PFAM ATPase associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 415.0
MMS3_k127_1475868_4 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 415.0
MMS3_k127_1475868_5 Type II/IV secretion system protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 408.0
MMS3_k127_1475868_6 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 396.0
MMS3_k127_1475868_7 Glutathione S-Transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 349.0
MMS3_k127_1475868_8 Transcriptional regulator K13641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 334.0
MMS3_k127_1475868_9 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 322.0
MMS3_k127_1515079_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.425e-270 840.0
MMS3_k127_1515079_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 8.623e-227 714.0
MMS3_k127_1515079_10 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 304.0
MMS3_k127_1515079_11 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 282.0
MMS3_k127_1515079_12 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000005542 265.0
MMS3_k127_1515079_13 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000001454 264.0
MMS3_k127_1515079_14 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000003475 245.0
MMS3_k127_1515079_15 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000006065 222.0
MMS3_k127_1515079_16 COG0739 Membrane proteins related to metalloendopeptidases K06194,K12943 GO:0000920,GO:0001896,GO:0005575,GO:0005623,GO:0008150,GO:0008219,GO:0009279,GO:0009987,GO:0012501,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0043085,GO:0044093,GO:0044462,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000003227 211.0
MMS3_k127_1515079_17 PFAM Smr - - - 0.000000000000000000000000000000000000000000000004964 177.0
MMS3_k127_1515079_18 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000001899 108.0
MMS3_k127_1515079_19 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000002013 107.0
MMS3_k127_1515079_2 PFAM Aminotransferase class I and II K14261 - - 3.668e-225 701.0
MMS3_k127_1515079_3 homoserine dehydrogenase K00003 - 1.1.1.3 1.165e-211 664.0
MMS3_k127_1515079_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 603.0
MMS3_k127_1515079_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 489.0
MMS3_k127_1515079_6 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 448.0
MMS3_k127_1515079_7 RNA polymerase sigma factor RpoS K03087 GO:0000988,GO:0000990,GO:0001000,GO:0001121,GO:0001123,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 429.0
MMS3_k127_1515079_8 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000986 408.0
MMS3_k127_1515079_9 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 364.0
MMS3_k127_1535507_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.704e-307 951.0
MMS3_k127_1535507_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.256e-274 858.0
MMS3_k127_1535507_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 433.0
MMS3_k127_1535507_11 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 409.0
MMS3_k127_1535507_12 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 350.0
MMS3_k127_1535507_13 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 339.0
MMS3_k127_1535507_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 319.0
MMS3_k127_1535507_15 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 286.0
MMS3_k127_1535507_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002293 275.0
MMS3_k127_1535507_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000006315 250.0
MMS3_k127_1535507_18 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000002734 232.0
MMS3_k127_1535507_19 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000001924 204.0
MMS3_k127_1535507_2 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 7.961e-269 850.0
MMS3_k127_1535507_20 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.0000000000000000000000000000000000000000000008135 169.0
MMS3_k127_1535507_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000008566 149.0
MMS3_k127_1535507_22 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000021 148.0
MMS3_k127_1535507_23 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000000000000009188 115.0
MMS3_k127_1535507_24 Protein of unknown function (DUF2818) - - - 0.000000000000000000000000001319 115.0
MMS3_k127_1535507_25 CRS1_YhbY K07574 - - 0.0000000000000000000000002799 109.0
MMS3_k127_1535507_26 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000004889 104.0
MMS3_k127_1535507_27 Domain of unknown function (DUF4149) - - - 0.000000000000000000001489 100.0
MMS3_k127_1535507_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.911e-243 754.0
MMS3_k127_1535507_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 7.647e-233 730.0
MMS3_k127_1535507_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.161e-225 704.0
MMS3_k127_1535507_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 595.0
MMS3_k127_1535507_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 580.0
MMS3_k127_1535507_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 474.0
MMS3_k127_1535507_9 Sigma-54 interaction domain K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 476.0
MMS3_k127_1585233_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1881.0
MMS3_k127_1585233_1 Protein of unknown function, DUF255 K06888 - - 3.697e-260 818.0
MMS3_k127_1585233_10 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 371.0
MMS3_k127_1585233_11 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 330.0
MMS3_k127_1585233_12 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 322.0
MMS3_k127_1585233_13 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002108 269.0
MMS3_k127_1585233_14 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004144 245.0
MMS3_k127_1585233_15 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000001839 239.0
MMS3_k127_1585233_16 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000008468 233.0
MMS3_k127_1585233_17 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000000000000000000131 225.0
MMS3_k127_1585233_18 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000001223 212.0
MMS3_k127_1585233_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000431 209.0
MMS3_k127_1585233_2 Glycine cleavage system P-protein K00283 - 1.4.4.2 4.05e-243 757.0
MMS3_k127_1585233_20 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000000000007594 200.0
MMS3_k127_1585233_21 PFAM ApaG domain protein K06195 - - 0.000000000000000000000000000000000000000000000000000000009375 199.0
MMS3_k127_1585233_22 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.0000000000000000000000000000000000000000000000003224 182.0
MMS3_k127_1585233_23 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000003903 152.0
MMS3_k127_1585233_24 Late competence development protein ComFB - - - 0.0000000000000000003058 90.0
MMS3_k127_1585233_25 LysM domain protein - - - 0.000000006986 68.0
MMS3_k127_1585233_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 608.0
MMS3_k127_1585233_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 490.0
MMS3_k127_1585233_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 485.0
MMS3_k127_1585233_6 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 488.0
MMS3_k127_1585233_7 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 477.0
MMS3_k127_1585233_8 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 467.0
MMS3_k127_1585233_9 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 451.0
MMS3_k127_1589051_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 400.0
MMS3_k127_1589051_1 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009967 394.0
MMS3_k127_1589051_2 Domain of unknown function (DUF4150) - - - 0.000000000000000000000000000000000000000000000000000000000002607 211.0
MMS3_k127_1589051_3 - - - - 0.000000000000000000000000000000000000000000115 165.0
MMS3_k127_1589051_4 protein conserved in bacteria K11904 - - 0.00000000000000000000000000001643 120.0
MMS3_k127_1621976_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 368.0
MMS3_k127_1621976_1 Protein of unknown function (DUF3050) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 330.0
MMS3_k127_1621976_10 - - - - 0.000000000000000000302 94.0
MMS3_k127_1621976_12 Protein of unknown function (DUF3562) - - - 0.0005003 45.0
MMS3_k127_1621976_2 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.000000000000000000000000000000000000000000000000000000000000000001851 234.0
MMS3_k127_1621976_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000007823 227.0
MMS3_k127_1621976_4 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000002141 154.0
MMS3_k127_1621976_5 SURF4 family - - - 0.000000000000000000000000000000000000004679 156.0
MMS3_k127_1621976_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000002388 129.0
MMS3_k127_1621976_7 MltA-interacting protein MipA K07274 - - 0.000000000000000000000001222 114.0
MMS3_k127_1621976_8 COG0188 Type IIA topoisomerase (DNA gyrase topo II, topoisomerase IV), A subunit - - - 0.00000000000000000001014 93.0
MMS3_k127_1621976_9 - - - - 0.0000000000000000002714 93.0
MMS3_k127_1655380_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 9.441e-200 630.0
MMS3_k127_1655380_1 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 479.0
MMS3_k127_1655380_2 IS30 family K07482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 427.0
MMS3_k127_1655380_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001306 281.0
MMS3_k127_1655380_4 Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000006374 120.0
MMS3_k127_1714303_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 2.457e-207 659.0
MMS3_k127_1714303_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 582.0
MMS3_k127_1714303_10 phosphocarrier protein HPR K11189 - - 0.000000000000000000000000003499 112.0
MMS3_k127_1714303_11 - - - - 0.00000006845 61.0
MMS3_k127_1714303_2 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 475.0
MMS3_k127_1714303_3 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 324.0
MMS3_k127_1714303_5 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000248 197.0
MMS3_k127_1714303_6 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.0000000000000000000000000000000000000000000000003886 180.0
MMS3_k127_1714303_7 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000000000006941 150.0
MMS3_k127_1714303_8 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000003692 155.0
MMS3_k127_1714303_9 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000001084 139.0
MMS3_k127_172447_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 1.871e-235 747.0
MMS3_k127_172447_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 2.588e-198 648.0
MMS3_k127_172447_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000006882 243.0
MMS3_k127_172447_11 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions K05501 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0007049,GO:0007346,GO:0008150,GO:0009295,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010948,GO:0010974,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0031323,GO:0031326,GO:0031333,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043547,GO:0043565,GO:0043590,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051302,GO:0051336,GO:0051345,GO:0051726,GO:0051782,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0071840,GO:0080090,GO:0090529,GO:0097159,GO:0140110,GO:1901363,GO:1901891,GO:1901892,GO:1902410,GO:1902412,GO:1902413,GO:1903047,GO:1903436,GO:1903437,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000001477 229.0
MMS3_k127_172447_12 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000009005 227.0
MMS3_k127_172447_13 PFAM ABC-type uncharacterised transport system - - - 0.0000000000000000000000000000000000000000000000000001972 191.0
MMS3_k127_172447_14 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000001079 138.0
MMS3_k127_172447_15 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000141 108.0
MMS3_k127_172447_16 - - - - 0.000000000000000004589 93.0
MMS3_k127_172447_2 major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 504.0
MMS3_k127_172447_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 466.0
MMS3_k127_172447_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 454.0
MMS3_k127_172447_5 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 377.0
MMS3_k127_172447_6 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 376.0
MMS3_k127_172447_7 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 346.0
MMS3_k127_172447_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 314.0
MMS3_k127_172447_9 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 313.0
MMS3_k127_1752617_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2190.0
MMS3_k127_1752617_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1140.0
MMS3_k127_1752617_10 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007135 536.0
MMS3_k127_1752617_11 dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 533.0
MMS3_k127_1752617_12 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 488.0
MMS3_k127_1752617_13 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 471.0
MMS3_k127_1752617_14 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 431.0
MMS3_k127_1752617_15 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 387.0
MMS3_k127_1752617_16 Protein of unknown function (DUF2797) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 356.0
MMS3_k127_1752617_17 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 346.0
MMS3_k127_1752617_18 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 335.0
MMS3_k127_1752617_19 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 336.0
MMS3_k127_1752617_2 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 6.856e-238 762.0
MMS3_k127_1752617_20 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 312.0
MMS3_k127_1752617_21 protein containing LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 301.0
MMS3_k127_1752617_22 Transcriptional regulatory protein, C terminal K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 287.0
MMS3_k127_1752617_23 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000002511 236.0
MMS3_k127_1752617_24 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000004089 242.0
MMS3_k127_1752617_25 Mota tolq exbb proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000001219 234.0
MMS3_k127_1752617_26 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000001684 220.0
MMS3_k127_1752617_27 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000001324 218.0
MMS3_k127_1752617_28 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000003753 209.0
MMS3_k127_1752617_29 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000005462 212.0
MMS3_k127_1752617_3 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.841e-231 723.0
MMS3_k127_1752617_30 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000000000000000000000000000001218 207.0
MMS3_k127_1752617_31 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000002564 199.0
MMS3_k127_1752617_32 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000001895 199.0
MMS3_k127_1752617_33 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000008243 188.0
MMS3_k127_1752617_34 PFAM Pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000000000000000002341 164.0
MMS3_k127_1752617_35 PFAM Fimbrial assembly K02663 - - 0.0000000000000000000000000000000000000000005871 164.0
MMS3_k127_1752617_36 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000007489 158.0
MMS3_k127_1752617_37 nuclease - - - 0.00000000000000000000000000000000000000001177 165.0
MMS3_k127_1752617_38 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000004158 151.0
MMS3_k127_1752617_39 AAA domain K03112 - - 0.00000000000000000000000000000000001411 156.0
MMS3_k127_1752617_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.97e-230 717.0
MMS3_k127_1752617_40 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000000000002513 126.0
MMS3_k127_1752617_41 - - - - 0.0000000000000000000000006317 106.0
MMS3_k127_1752617_42 - - - - 0.00000000000000002147 84.0
MMS3_k127_1752617_43 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000002886 87.0
MMS3_k127_1752617_44 lytic transglycosylase activity - - - 0.000000000004053 80.0
MMS3_k127_1752617_45 Protein of unknown function (DUF3135) - - - 0.00000000009322 67.0
MMS3_k127_1752617_46 Protein of unknown function (DUF3617) - - - 0.0000004957 57.0
MMS3_k127_1752617_5 TonB dependent receptor K02014 - - 6.74e-204 658.0
MMS3_k127_1752617_6 TIGRFAM type IV pilus secretin (or competence protein) PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 631.0
MMS3_k127_1752617_7 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 566.0
MMS3_k127_1752617_8 PFAM malic K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 559.0
MMS3_k127_1752617_9 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0019904,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0090304,GO:0097718,GO:0140098,GO:1901360,GO:1901361,GO:1901575 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 550.0
MMS3_k127_1820133_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 3.606e-198 625.0
MMS3_k127_1820133_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 590.0
MMS3_k127_1820133_10 Glutathione peroxidase - - - 0.0000000000000000000000000000000000000001228 156.0
MMS3_k127_1820133_11 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000003639 141.0
MMS3_k127_1820133_12 - - - - 0.000000000000000000000000009422 118.0
MMS3_k127_1820133_13 Glutathione peroxidase - - - 0.0000000000000000009225 92.0
MMS3_k127_1820133_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 522.0
MMS3_k127_1820133_3 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 425.0
MMS3_k127_1820133_4 chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 394.0
MMS3_k127_1820133_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008362 394.0
MMS3_k127_1820133_6 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 383.0
MMS3_k127_1820133_7 Iron--sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000000001507 187.0
MMS3_k127_1820133_8 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000001831 198.0
MMS3_k127_1820133_9 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000003147 167.0
MMS3_k127_1839816_0 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.0 1933.0
MMS3_k127_1839816_1 Polysulphide reductase, NrfD K00185 - - 6.708e-225 703.0
MMS3_k127_1839816_10 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000357 184.0
MMS3_k127_1839816_11 Methylmuconolactone methyl-isomerase - - - 0.00000000000000000000000000000000000001298 146.0
MMS3_k127_1839816_12 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000009626 143.0
MMS3_k127_1839816_13 Protein of unknown function, DUF481 - - - 0.0000000000000000000000003685 115.0
MMS3_k127_1839816_14 Lysozyme inhibitor LprI K06894,K06921 - - 0.000000002045 67.0
MMS3_k127_1839816_15 FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6 K06126 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008681,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0016491,GO:0016705,GO:0016709,GO:0016712,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - 0.0001735 54.0
MMS3_k127_1839816_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 370.0
MMS3_k127_1839816_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 331.0
MMS3_k127_1839816_4 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 298.0
MMS3_k127_1839816_5 4Fe-4S ferredoxin K08358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004841 284.0
MMS3_k127_1839816_6 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003963 272.0
MMS3_k127_1839816_7 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000000000000000000000000000000000000000002704 231.0
MMS3_k127_1839816_8 PFAM Radical SAM K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000001381 241.0
MMS3_k127_1839816_9 Protein of unknown function (DUF3465) - - - 0.00000000000000000000000000000000000000000000002406 174.0
MMS3_k127_1879121_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1315.0
MMS3_k127_1879121_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 531.0
MMS3_k127_1879121_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 470.0
MMS3_k127_1879121_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 416.0
MMS3_k127_1879121_4 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000002586 188.0
MMS3_k127_1879121_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000007542 179.0
MMS3_k127_1879121_6 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.00000000000000000000000000000000000000298 152.0
MMS3_k127_1879121_7 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000001857 113.0
MMS3_k127_1879121_8 Domain of unknown function (DUF4034) - - - 0.00000000009884 70.0
MMS3_k127_1879121_9 Domain of unknown function (DUF4034) - - - 0.0000001598 59.0
MMS3_k127_1887265_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 497.0
MMS3_k127_1887265_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 368.0
MMS3_k127_1887265_10 Flavodoxin - - - 0.0000000000000000000000000000000000000001203 155.0
MMS3_k127_1887265_11 double-strand break repair K09946 - - 0.0000000000000000000000000000000000000002053 152.0
MMS3_k127_1887265_12 Nif11 domain - - - 0.000000000000000000000003106 103.0
MMS3_k127_1887265_13 oxidoreductase activity K00316 - 1.5.99.6 0.0000000000000000000007406 100.0
MMS3_k127_1887265_15 Transcriptional regulator - - - 0.0006817 46.0
MMS3_k127_1887265_2 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009555 338.0
MMS3_k127_1887265_3 Belongs to the UPF0061 (SELO) family K08997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003263 262.0
MMS3_k127_1887265_4 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002901 242.0
MMS3_k127_1887265_5 kinase activity K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000153 232.0
MMS3_k127_1887265_6 - - - - 0.000000000000000000000000000000000000000000000000000000000006774 210.0
MMS3_k127_1887265_7 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001152 213.0
MMS3_k127_1887265_8 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000005798 194.0
MMS3_k127_1887265_9 - - - - 0.000000000000000000000000000000000000000000006208 170.0
MMS3_k127_1888516_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 - 5.1e-322 994.0
MMS3_k127_1888516_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.23e-275 857.0
MMS3_k127_1888516_2 chemotaxis, protein K03406 - - 0.00000000005621 65.0
MMS3_k127_1903514_0 Von willebrand factor, type a - - - 0.0 1106.0
MMS3_k127_1903514_1 Belongs to the RuBisCO large chain family K01601 - 4.1.1.39 1.369e-284 876.0
MMS3_k127_1903514_10 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 461.0
MMS3_k127_1903514_11 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 427.0
MMS3_k127_1903514_12 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 414.0
MMS3_k127_1903514_13 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 401.0
MMS3_k127_1903514_14 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 398.0
MMS3_k127_1903514_15 drug resistance transporter Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 397.0
MMS3_k127_1903514_16 Transcriptional regulator K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 383.0
MMS3_k127_1903514_17 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 378.0
MMS3_k127_1903514_18 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 365.0
MMS3_k127_1903514_19 TIGRFAM 2-oxoacid acceptor oxidoreductase, beta subunit, pyruvate 2-ketoisovalerate family K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 362.0
MMS3_k127_1903514_2 Putative diguanylate phosphodiesterase - - - 1.576e-232 738.0
MMS3_k127_1903514_20 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 365.0
MMS3_k127_1903514_21 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 336.0
MMS3_k127_1903514_22 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 318.0
MMS3_k127_1903514_23 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 316.0
MMS3_k127_1903514_24 CBS domain containing protein K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 289.0
MMS3_k127_1903514_25 signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000478 284.0
MMS3_k127_1903514_26 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001138 263.0
MMS3_k127_1903514_27 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002188 246.0
MMS3_k127_1903514_28 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000009354 210.0
MMS3_k127_1903514_29 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000001062 212.0
MMS3_k127_1903514_3 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 578.0
MMS3_k127_1903514_30 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000059 203.0
MMS3_k127_1903514_31 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000000000008184 194.0
MMS3_k127_1903514_32 PFAM DsrE DsrF-like family K09004 - - 0.000000000000000000000000000000000000000000000000000004796 194.0
MMS3_k127_1903514_33 Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity K13771 - - 0.00000000000000000000000000000000000000000000000003999 182.0
MMS3_k127_1903514_34 Alpha beta - - - 0.0000000000000000000000000000000000000000000000005806 185.0
MMS3_k127_1903514_35 Protein of unknown function (DUF3015) - - - 0.00000000000000000000000000000001903 131.0
MMS3_k127_1903514_36 - - - - 0.00000000000000000000000000001317 122.0
MMS3_k127_1903514_37 Universal stress protein K06149 - - 0.00000000000000000000000000009018 121.0
MMS3_k127_1903514_38 - - - - 0.0000000000000000000000000002777 126.0
MMS3_k127_1903514_39 CHAP domain - - - 0.0000000000000000000000000009101 121.0
MMS3_k127_1903514_4 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 535.0
MMS3_k127_1903514_43 Belongs to the sulfur carrier protein TusA family K07112 - - 0.000000000000000961 86.0
MMS3_k127_1903514_44 Sulphur transport K07112 - - 0.0000000000000617 78.0
MMS3_k127_1903514_45 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000003129 78.0
MMS3_k127_1903514_46 - - - - 0.00000000008335 66.0
MMS3_k127_1903514_48 DsrE/DsrF-like family K09004 - - 0.000000007441 63.0
MMS3_k127_1903514_5 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 531.0
MMS3_k127_1903514_6 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 526.0
MMS3_k127_1903514_7 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 495.0
MMS3_k127_1903514_8 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006741 465.0
MMS3_k127_1903514_9 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 479.0
MMS3_k127_1910276_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1200.0
MMS3_k127_1910276_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1134.0
MMS3_k127_1910276_10 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 504.0
MMS3_k127_1910276_11 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 366.0
MMS3_k127_1910276_12 CorA-like Mg2+ transporter protein K16074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 340.0
MMS3_k127_1910276_13 Glutathione S-transferase K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 321.0
MMS3_k127_1910276_14 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008034 282.0
MMS3_k127_1910276_15 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008784 283.0
MMS3_k127_1910276_16 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004264 245.0
MMS3_k127_1910276_17 glyoxalase K07032 - - 0.000000000000000000000000000000000000000000000000000000000003782 214.0
MMS3_k127_1910276_18 GrpB protein - - - 0.0000000000000000000000000000000000000000000000000000003129 199.0
MMS3_k127_1910276_19 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000000000000000006636 189.0
MMS3_k127_1910276_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1065.0
MMS3_k127_1910276_20 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000005476 183.0
MMS3_k127_1910276_21 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000008084 169.0
MMS3_k127_1910276_22 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000007923 153.0
MMS3_k127_1910276_23 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.00000000000000000000000000000000007753 138.0
MMS3_k127_1910276_24 Acetyltransferase (GNAT) domain - GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 - 0.0000000000000000000000000003637 117.0
MMS3_k127_1910276_25 regulatory protein TetR - - - 0.000000000000000000000000008218 117.0
MMS3_k127_1910276_26 phosphatase (DUF442) - - - 0.00000000000000000000000001432 115.0
MMS3_k127_1910276_27 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.00000000000000000000000005336 114.0
MMS3_k127_1910276_28 DinB family - - - 0.000000000000000003949 85.0
MMS3_k127_1910276_29 - - - - 0.0000000000000002705 81.0
MMS3_k127_1910276_3 Belongs to the glycosyl hydrolase 57 family - - - 1.063e-249 777.0
MMS3_k127_1910276_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 6.442e-227 711.0
MMS3_k127_1910276_5 Belongs to the glycosyl hydrolase 57 family - - - 1.297e-223 706.0
MMS3_k127_1910276_6 Phosphoesterase family K01114 - 3.1.4.3 7.177e-214 681.0
MMS3_k127_1910276_7 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 557.0
MMS3_k127_1910276_8 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 550.0
MMS3_k127_1910276_9 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 538.0
MMS3_k127_1925494_0 PFAM peptidase M48 Ste24p - - - 3.882e-205 656.0
MMS3_k127_1925494_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 376.0
MMS3_k127_1925494_10 NnrU protein - - - 0.0000001186 53.0
MMS3_k127_1925494_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 290.0
MMS3_k127_1925494_3 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002567 279.0
MMS3_k127_1925494_4 6-phosphogluconate dehydrogenase NAD-binding K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000001826 270.0
MMS3_k127_1925494_5 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001451 246.0
MMS3_k127_1925494_6 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006492 245.0
MMS3_k127_1925494_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000006601 144.0
MMS3_k127_1925494_8 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000005882 132.0
MMS3_k127_1925494_9 Methyl-accepting chemotaxis protein - - - 0.0000000000000000000866 97.0
MMS3_k127_1940405_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 604.0
MMS3_k127_1940405_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007059,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022607,GO:0022611,GO:0022613,GO:0022618,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0043021,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0090069,GO:0090071,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 477.0
MMS3_k127_1940405_10 - - - - 0.0006651 43.0
MMS3_k127_1940405_11 Protein tyrosine kinase - - - 0.0006972 44.0
MMS3_k127_1940405_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0000287,GO:0003674,GO:0003824,GO:0004349,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019202,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0055129,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901973 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 475.0
MMS3_k127_1940405_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 437.0
MMS3_k127_1940405_4 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 299.0
MMS3_k127_1940405_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005533 263.0
MMS3_k127_1940405_6 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000003391 232.0
MMS3_k127_1940405_7 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000002636 216.0
MMS3_k127_1940405_8 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000001944 166.0
MMS3_k127_1940405_9 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000002003 144.0
MMS3_k127_1954781_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 497.0
MMS3_k127_1954781_1 response regulator K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 430.0
MMS3_k127_1954781_10 - - - - 0.000000000000000000000000000003892 125.0
MMS3_k127_1954781_11 Rhodanese domain protein - - - 0.00000000000000000000000000001371 121.0
MMS3_k127_1954781_12 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K20978 - - 0.000000000000000000000006119 104.0
MMS3_k127_1954781_2 COG0784 FOG CheY-like receiver K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 390.0
MMS3_k127_1954781_3 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 372.0
MMS3_k127_1954781_4 PFAM pfkB family carbohydrate kinase K00846 - 2.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000003164 261.0
MMS3_k127_1954781_5 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000003279 209.0
MMS3_k127_1954781_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000006941 196.0
MMS3_k127_1954781_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000003892 174.0
MMS3_k127_1954781_8 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000005373 174.0
MMS3_k127_1954781_9 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000001306 157.0
MMS3_k127_199481_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 6.34e-200 635.0
MMS3_k127_199481_1 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 531.0
MMS3_k127_199481_10 SURF1-like protein - - - 0.0000000000000000000000000000000000000003274 158.0
MMS3_k127_199481_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000004658 126.0
MMS3_k127_199481_12 oxidase assembly K02258 - - 0.0000000000000000000000000003517 123.0
MMS3_k127_199481_13 signal sequence binding - - - 0.00000000000000000003314 98.0
MMS3_k127_199481_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 425.0
MMS3_k127_199481_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 426.0
MMS3_k127_199481_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 389.0
MMS3_k127_199481_5 RNA polymerase sigma K03089 GO:0000150,GO:0000976,GO:0000984,GO:0000985,GO:0000988,GO:0000990,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006310,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009009,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031421,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009447 374.0
MMS3_k127_199481_6 von Willebrand factor type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 386.0
MMS3_k127_199481_7 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 368.0
MMS3_k127_199481_8 cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 311.0
MMS3_k127_199481_9 Part of the ABC transporter FtsEX involved in cellular division K09811 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0009274,GO:0009276,GO:0009987,GO:0016020,GO:0016021,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032153,GO:0044425,GO:0044464,GO:0051301,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 318.0
MMS3_k127_2004182_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 593.0
MMS3_k127_2004182_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 486.0
MMS3_k127_2004182_2 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 435.0
MMS3_k127_2004182_3 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 304.0
MMS3_k127_2004182_4 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000041 222.0
MMS3_k127_2004182_5 - - - - 0.0000000000000000000000000000000000000007926 156.0
MMS3_k127_2073031_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0 1738.0
MMS3_k127_2073031_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 6.207e-293 908.0
MMS3_k127_2073031_10 PFAM Protein phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000003772 223.0
MMS3_k127_2073031_11 Protein of unknown function (DUF1614) - - - 0.0000000000000000000000000000000000000000000000000000001536 201.0
MMS3_k127_2073031_12 PFAM Forkhead-associated protein - - - 0.00000000000000000000000000000000000000000000002096 177.0
MMS3_k127_2073031_13 Putative regulatory protein - - - 0.00000000000000000000000000000002996 127.0
MMS3_k127_2073031_14 Forkhead associated domain - - - 0.00000000000000000000004386 111.0
MMS3_k127_2073031_15 (FHA) domain - - - 0.0000000000000000000007638 98.0
MMS3_k127_2073031_2 serine threonine protein kinase K12132 - 2.7.11.1 9.322e-221 712.0
MMS3_k127_2073031_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 554.0
MMS3_k127_2073031_4 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 422.0
MMS3_k127_2073031_5 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 379.0
MMS3_k127_2073031_6 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 346.0
MMS3_k127_2073031_7 Permease YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009177 269.0
MMS3_k127_2073031_8 Permease K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000008041 238.0
MMS3_k127_2073031_9 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001827 222.0
MMS3_k127_2093654_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 2.1e-306 951.0
MMS3_k127_2093654_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.972e-285 888.0
MMS3_k127_2093654_10 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 339.0
MMS3_k127_2093654_11 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 349.0
MMS3_k127_2093654_12 long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 342.0
MMS3_k127_2093654_13 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 303.0
MMS3_k127_2093654_14 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 298.0
MMS3_k127_2093654_15 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 288.0
MMS3_k127_2093654_16 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 281.0
MMS3_k127_2093654_17 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 279.0
MMS3_k127_2093654_18 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001246 249.0
MMS3_k127_2093654_19 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000001136 221.0
MMS3_k127_2093654_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.444e-222 692.0
MMS3_k127_2093654_20 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000385 220.0
MMS3_k127_2093654_21 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000006853 197.0
MMS3_k127_2093654_22 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000919 199.0
MMS3_k127_2093654_23 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000001401 193.0
MMS3_k127_2093654_24 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3 0.000000000000000000000000000000000000000000000000001932 190.0
MMS3_k127_2093654_25 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000001795 154.0
MMS3_k127_2093654_26 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000000000000000008379 137.0
MMS3_k127_2093654_27 Cytochrome c K17223 - - 0.00000000000000000000000000000115 125.0
MMS3_k127_2093654_28 - - - - 0.000000000000000000000000000003703 124.0
MMS3_k127_2093654_29 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000002073 81.0
MMS3_k127_2093654_3 Cysteine-rich domain - - - 2.44e-213 669.0
MMS3_k127_2093654_30 Sulfur oxidation protein SoxY K17226 - - 0.0001006 46.0
MMS3_k127_2093654_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 512.0
MMS3_k127_2093654_5 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 451.0
MMS3_k127_2093654_6 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 449.0
MMS3_k127_2093654_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 441.0
MMS3_k127_2093654_8 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 434.0
MMS3_k127_2093654_9 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 377.0
MMS3_k127_2114485_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 0.0 1232.0
MMS3_k127_2114485_1 belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0044237 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 608.0
MMS3_k127_2114485_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363 533.0
MMS3_k127_2114485_3 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000000007081 108.0
MMS3_k127_2114485_5 - - - - 0.00005047 47.0
MMS3_k127_2117898_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 7.61e-208 661.0
MMS3_k127_2117898_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 569.0
MMS3_k127_2117898_10 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000169 207.0
MMS3_k127_2117898_11 Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000004046 187.0
MMS3_k127_2117898_12 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000001464 182.0
MMS3_k127_2117898_13 PilT protein domain protein - - - 0.00000000000000000000000000000005347 135.0
MMS3_k127_2117898_14 Acetolactate synthase K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.000000000000000000000002444 106.0
MMS3_k127_2117898_15 Cyclic nucleotide-binding domain - - - 0.000000000000000000000002749 111.0
MMS3_k127_2117898_16 Cupin 2, conserved barrel domain protein - - - 0.000000000002812 73.0
MMS3_k127_2117898_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 485.0
MMS3_k127_2117898_3 Major facilitator superfamily K08169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 484.0
MMS3_k127_2117898_4 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 384.0
MMS3_k127_2117898_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 381.0
MMS3_k127_2117898_6 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 372.0
MMS3_k127_2117898_7 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 339.0
MMS3_k127_2117898_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003421 227.0
MMS3_k127_2117898_9 Major facilitator Superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000002061 226.0
MMS3_k127_2153846_0 TIGRFAM SagB-type dehydrogenase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 516.0
MMS3_k127_2153846_1 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000001522 234.0
MMS3_k127_2153846_10 - - - - 0.00000000000005748 78.0
MMS3_k127_2153846_11 Protein of unknown function (DUF2750) - - - 0.0000000002182 70.0
MMS3_k127_2153846_12 - - - - 0.0000001669 55.0
MMS3_k127_2153846_2 Low-potential electron donor to a number of redox enzymes K03839,K03840 - - 0.00000000000000000000000000000000000000000000000000000000000000001938 229.0
MMS3_k127_2153846_3 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000007178 215.0
MMS3_k127_2153846_4 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000001887 162.0
MMS3_k127_2153846_5 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000007028 154.0
MMS3_k127_2153846_6 Iron-sulphur cluster biosynthesis - - - 0.0000000000000000000000000000000000000001153 154.0
MMS3_k127_2153846_7 NifZ domain K02597 - - 0.0000000000000000000000000001161 116.0
MMS3_k127_2153846_8 - - - - 0.00000000000000000006541 92.0
MMS3_k127_2153846_9 Belongs to the BolA IbaG family - - - 0.00000000000000006615 83.0
MMS3_k127_2160920_0 Diguanylate cyclase - - - 5.103e-235 761.0
MMS3_k127_2160920_1 Diguanylate cyclase - - - 9.58e-223 722.0
MMS3_k127_2160920_10 PFAM major facilitator superfamily MFS_1 K06902 - - 0.000000000000001298 83.0
MMS3_k127_2160920_11 cellulase activity - - - 0.000000002635 70.0
MMS3_k127_2160920_3 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 406.0
MMS3_k127_2160920_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 363.0
MMS3_k127_2160920_5 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 292.0
MMS3_k127_2160920_6 KR domain K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 294.0
MMS3_k127_2160920_7 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000001625 199.0
MMS3_k127_2160920_8 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000008001 145.0
MMS3_k127_2160920_9 Transposase, IS605 OrfB family - - - 0.0000000000000001971 82.0
MMS3_k127_2190012_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1996.0
MMS3_k127_2190012_1 one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high - - - 8.236e-295 908.0
MMS3_k127_2190012_10 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001098 301.0
MMS3_k127_2190012_11 Copper resistance protein B precursor (CopB) K07233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002001 262.0
MMS3_k127_2190012_12 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000001821 220.0
MMS3_k127_2190012_13 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000000000000000003841 217.0
MMS3_k127_2190012_14 Nitrate reductase, delta subunit K00373 - - 0.000000000000000000000000000000000000000001561 164.0
MMS3_k127_2190012_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000006647 131.0
MMS3_k127_2190012_16 - - - - 0.000000000006631 68.0
MMS3_k127_2190012_2 Belongs to the phosphatidylserine decarboxylase family K01613 - 4.1.1.65 5.939e-228 714.0
MMS3_k127_2190012_3 PFAM major facilitator superfamily MFS_1 K02575 - - 3.024e-210 662.0
MMS3_k127_2190012_4 RESPONSE REGULATOR receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 492.0
MMS3_k127_2190012_5 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 462.0
MMS3_k127_2190012_6 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 384.0
MMS3_k127_2190012_7 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 328.0
MMS3_k127_2190012_8 LysR substrate binding domain K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 331.0
MMS3_k127_2190012_9 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 317.0
MMS3_k127_2196261_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.514e-210 661.0
MMS3_k127_2196261_1 heat shock protein DnaJ K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 533.0
MMS3_k127_2196261_10 Prokaryotic cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007681 257.0
MMS3_k127_2196261_11 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008503 250.0
MMS3_k127_2196261_12 nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005189 243.0
MMS3_k127_2196261_13 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000006707 229.0
MMS3_k127_2196261_14 small multidrug export protein - - - 0.000000000000000000000000000000000000000000000000000471 192.0
MMS3_k127_2196261_15 transcriptional regulator, luxR family - - - 0.000000000000000000000000000000000000000000000000000501 196.0
MMS3_k127_2196261_16 Tautomerase enzyme - - - 0.00000000000000000000000000000000000000000000000001234 184.0
MMS3_k127_2196261_17 - - - - 0.0000000000000000000000000000000000000000000000001377 184.0
MMS3_k127_2196261_18 Cupin domain - - - 0.000000000000000000000000000000000000000000000003352 173.0
MMS3_k127_2196261_19 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000000000000000002729 163.0
MMS3_k127_2196261_2 Sulphur oxygenase reductase K16952 - 1.13.11.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 526.0
MMS3_k127_2196261_20 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000009434 158.0
MMS3_k127_2196261_21 - - - - 0.0000000000000000000000000000000000000488 147.0
MMS3_k127_2196261_22 MerR HTH family regulatory protein K18997 - - 0.00000000000000000000000000000000000007173 144.0
MMS3_k127_2196261_23 Protein of unknown function (DUF1641) - - - 0.0000000000000000000000000000000000008739 153.0
MMS3_k127_2196261_24 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000006617 137.0
MMS3_k127_2196261_25 decarboxylase K01607 - 4.1.1.44 0.000000000000000000000000000000001345 134.0
MMS3_k127_2196261_26 Protein of unknown function (DUF3565) - - - 0.00000000000000000000000000002062 118.0
MMS3_k127_2196261_28 TonB C terminal K03832 - - 0.00000002767 64.0
MMS3_k127_2196261_29 - - - - 0.0003761 47.0
MMS3_k127_2196261_3 Tetrahydrodipicolinate N-succinyltransferase middle K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 403.0
MMS3_k127_2196261_4 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 329.0
MMS3_k127_2196261_5 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 321.0
MMS3_k127_2196261_6 Fungal trichothecene efflux pump (TRI12) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 325.0
MMS3_k127_2196261_7 PFAM Glutathione S-transferase domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000086 281.0
MMS3_k127_2196261_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002035 278.0
MMS3_k127_2196261_9 Hemolysin III K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005249 275.0
MMS3_k127_2213303_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1106.0
MMS3_k127_2213303_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0050896,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 442.0
MMS3_k127_2213303_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 326.0
MMS3_k127_2216923_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.10 1.162e-214 676.0
MMS3_k127_2216923_1 COG4206 Outer membrane cobalamin receptor protein K16092 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 - 1.771e-196 629.0
MMS3_k127_2216923_10 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008819,GO:0008820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0033554,GO:0044237,GO:0050896,GO:0051716,GO:0070568 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
MMS3_k127_2216923_11 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008818,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.8.26 0.00000000000000000000000000000000000000000000000000000000002957 214.0
MMS3_k127_2216923_12 Phosphoglycerate mutase family K02226,K15634 - 3.1.3.73,5.4.2.12 0.0000000000000000000000000000000000000000000000000000003495 199.0
MMS3_k127_2216923_13 Carbohydrate-selective porin, OprB family K07267 - - 0.000000000000000000000000000000000000000000000000000001925 207.0
MMS3_k127_2216923_14 - - - - 0.000000000000000000000000000000000000000000000000008376 190.0
MMS3_k127_2216923_15 - - - - 0.00000000000000000000000000000000000000000001576 166.0
MMS3_k127_2216923_2 CobB/CobQ-like glutamine amidotransferase domain K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 502.0
MMS3_k127_2216923_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 422.0
MMS3_k127_2216923_4 Aminotransferase class I and II K02225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 396.0
MMS3_k127_2216923_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 373.0
MMS3_k127_2216923_6 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 308.0
MMS3_k127_2216923_7 chemotaxis, protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002778 294.0
MMS3_k127_2216923_8 High-affinity nickel-transport protein K07241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001957 279.0
MMS3_k127_2216923_9 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000001382 269.0
MMS3_k127_2238742_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1127.0
MMS3_k127_2238742_1 Fumarate reductase flavoprotein C-term K00394 - 1.8.99.2 2.488e-295 914.0
MMS3_k127_2238742_10 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 461.0
MMS3_k127_2238742_11 Beta-ketoacyl synthase, N-terminal domain K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 414.0
MMS3_k127_2238742_12 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 385.0
MMS3_k127_2238742_13 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 366.0
MMS3_k127_2238742_14 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 329.0
MMS3_k127_2238742_15 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 348.0
MMS3_k127_2238742_16 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 321.0
MMS3_k127_2238742_17 (ABC) transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 320.0
MMS3_k127_2238742_18 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 312.0
MMS3_k127_2238742_19 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 304.0
MMS3_k127_2238742_2 Bifunctional purine biosynthesis protein PurH K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 4.255e-263 818.0
MMS3_k127_2238742_20 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 315.0
MMS3_k127_2238742_21 UTRA K03486,K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003584 284.0
MMS3_k127_2238742_22 Protoglobin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002245 284.0
MMS3_k127_2238742_23 Bacterial lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000743 279.0
MMS3_k127_2238742_24 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006861 280.0
MMS3_k127_2238742_25 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000003894 267.0
MMS3_k127_2238742_26 PBS lyase HEAT-like repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004241 259.0
MMS3_k127_2238742_27 Glycosyl Transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002838 254.0
MMS3_k127_2238742_28 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002437 237.0
MMS3_k127_2238742_29 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000002103 214.0
MMS3_k127_2238742_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.433e-254 788.0
MMS3_k127_2238742_30 signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000004331 214.0
MMS3_k127_2238742_31 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000002987 207.0
MMS3_k127_2238742_32 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000004821 198.0
MMS3_k127_2238742_33 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000001971 187.0
MMS3_k127_2238742_34 Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000000000000001986 181.0
MMS3_k127_2238742_35 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000008766 181.0
MMS3_k127_2238742_36 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000004089 171.0
MMS3_k127_2238742_37 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000001141 169.0
MMS3_k127_2238742_38 competence protein - - - 0.000000000000000000000000000000000000000000000489 185.0
MMS3_k127_2238742_39 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000001304 160.0
MMS3_k127_2238742_4 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.226e-238 742.0
MMS3_k127_2238742_40 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000000000000000000000004254 143.0
MMS3_k127_2238742_41 Ferredoxin - - - 0.000000000000000000000000000000000002806 138.0
MMS3_k127_2238742_42 CbiX K03794 - 4.99.1.4 0.000000000000000000000000000000001253 133.0
MMS3_k127_2238742_43 ECF sigma factor K03088 - - 0.00000000000000000000000000000008649 132.0
MMS3_k127_2238742_44 MJ0042 family finger-like protein - - - 0.0000000000000000000000000000001223 141.0
MMS3_k127_2238742_45 dehydratase - - - 0.0000000000000000000000000000009029 126.0
MMS3_k127_2238742_46 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.000000000000000000000000000008209 124.0
MMS3_k127_2238742_47 acyl carrier protein K02078 - - 0.00000000000000000000000000005979 117.0
MMS3_k127_2238742_48 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.0000000000000000000000000002931 117.0
MMS3_k127_2238742_49 CutA1 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0009987,GO:0016043,GO:0022607,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 - 0.0000000000000000000000000004056 117.0
MMS3_k127_2238742_5 Belongs to the GARS family K01945 GO:0003674,GO:0003824,GO:0004637,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.13 2.205e-203 640.0
MMS3_k127_2238742_50 hydrolase K07025 - - 0.00000000000000000000000001037 119.0
MMS3_k127_2238742_51 Integral membrane protein (DUF2244) - - - 0.00000000000000000000000008021 113.0
MMS3_k127_2238742_52 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000001206 108.0
MMS3_k127_2238742_53 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000006187 103.0
MMS3_k127_2238742_54 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000007297 109.0
MMS3_k127_2238742_55 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000009296 100.0
MMS3_k127_2238742_56 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0000000000000002823 86.0
MMS3_k127_2238742_57 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000007687 85.0
MMS3_k127_2238742_58 - - - - 0.000000000000001244 80.0
MMS3_k127_2238742_59 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000002491 80.0
MMS3_k127_2238742_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 509.0
MMS3_k127_2238742_60 YfaZ precursor - - - 0.000000000008288 73.0
MMS3_k127_2238742_61 Dehydratase - - - 0.00000000004234 68.0
MMS3_k127_2238742_62 PilZ domain - - - 0.0000000002549 66.0
MMS3_k127_2238742_63 Bacterial SH3 domain homologues - - - 0.000000003923 66.0
MMS3_k127_2238742_64 integral membrane protein - - - 0.00000002527 63.0
MMS3_k127_2238742_65 membrane - - - 0.0000005005 59.0
MMS3_k127_2238742_66 PBS lyase HEAT-like repeat - - - 0.0000121 57.0
MMS3_k127_2238742_67 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.0001385 46.0
MMS3_k127_2238742_68 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.0004026 45.0
MMS3_k127_2238742_69 COG2199 FOG GGDEF domain - - - 0.00073 44.0
MMS3_k127_2238742_7 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 494.0
MMS3_k127_2238742_8 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 477.0
MMS3_k127_2238742_9 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 456.0
MMS3_k127_2240376_0 Isocitrate lyase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 595.0
MMS3_k127_2240376_1 Transcriptional regulator, LysR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 435.0
MMS3_k127_2240376_2 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000000000000000000000000193 176.0
MMS3_k127_2240376_3 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000001087 75.0
MMS3_k127_2261725_0 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 4.514e-268 846.0
MMS3_k127_2261725_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 362.0
MMS3_k127_2261725_2 transcriptional regulator K13639 - - 0.000000000000000000000000000000000000000000000000001556 186.0
MMS3_k127_2261725_3 L COG3666 Transposase and inactivated derivatives - - - 0.000000000000000007452 84.0
MMS3_k127_2261725_4 Belongs to the NiCoT transporter (TC 2.A.52) family K08970 - - 0.000002525 49.0
MMS3_k127_2324618_0 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 602.0
MMS3_k127_2324618_1 Type VI secretion K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 534.0
MMS3_k127_2324618_2 Type VI secretion, TssG K11895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 321.0
MMS3_k127_2331042_0 Bacterial transglutaminase-like N-terminal - - - 0.0 1577.0
MMS3_k127_2331042_1 Circularly permuted ATP-grasp type 2 - - - 2.528e-255 793.0
MMS3_k127_2331042_10 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 379.0
MMS3_k127_2331042_11 ATPases associated with a variety of cellular activities K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 369.0
MMS3_k127_2331042_12 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 347.0
MMS3_k127_2331042_13 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 340.0
MMS3_k127_2331042_14 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 327.0
MMS3_k127_2331042_15 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 318.0
MMS3_k127_2331042_16 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 321.0
MMS3_k127_2331042_17 Permease MlaE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 297.0
MMS3_k127_2331042_18 PFAM Response regulator receiver domain, Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 290.0
MMS3_k127_2331042_19 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002385 281.0
MMS3_k127_2331042_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.616e-220 696.0
MMS3_k127_2331042_20 signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000429 250.0
MMS3_k127_2331042_21 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004776 229.0
MMS3_k127_2331042_22 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000000000000003198 217.0
MMS3_k127_2331042_23 Pfam Rhodanese-like - - - 0.00000000000000000000000000000000000000000000000000000000003011 208.0
MMS3_k127_2331042_24 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000014 214.0
MMS3_k127_2331042_25 dioxygenase of extradiol dioxygenase family K06991 - - 0.0000000000000000000000000000000000000000000000000000000007547 206.0
MMS3_k127_2331042_26 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000001579 213.0
MMS3_k127_2331042_27 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000002334 185.0
MMS3_k127_2331042_28 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000009725 180.0
MMS3_k127_2331042_29 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000002363 123.0
MMS3_k127_2331042_3 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 519.0
MMS3_k127_2331042_30 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000009511 115.0
MMS3_k127_2331042_31 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000007282 109.0
MMS3_k127_2331042_32 SMART Transport-associated and nodulation region - - - 0.00000000000000000000219 98.0
MMS3_k127_2331042_33 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000004335 68.0
MMS3_k127_2331042_34 Nacht domain - - - 0.00000002252 66.0
MMS3_k127_2331042_4 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 511.0
MMS3_k127_2331042_5 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 479.0
MMS3_k127_2331042_6 Sigma factor PP2C-like phosphatases K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 448.0
MMS3_k127_2331042_7 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 408.0
MMS3_k127_2331042_8 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 395.0
MMS3_k127_2331042_9 zinc-ribbon domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 377.0
MMS3_k127_2337545_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 554.0
MMS3_k127_2337545_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008289,GO:0008689,GO:0008757,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042538,GO:0043167,GO:0043168,GO:0043431,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051188,GO:0061542,GO:0071704,GO:1901576,GO:1901611,GO:1901661,GO:1901663 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 366.0
MMS3_k127_2337545_2 HAD-hyrolase-like K01091,K22292 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006040,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009254,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0030203,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097172,GO:1901135,GO:1901360,GO:1901564 3.1.3.105,3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000004294 247.0
MMS3_k127_2337545_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000005663 195.0
MMS3_k127_2337545_4 DNA recombination protein RmuC K09760 - - 0.0000000000000000000000001259 116.0
MMS3_k127_2356971_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1225.0
MMS3_k127_2356971_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 611.0
MMS3_k127_2356971_11 SMART helix-turn-helix domain protein K18831 - - 0.0000003704 53.0
MMS3_k127_2356971_2 ATPase (AAA K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008514 608.0
MMS3_k127_2356971_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 449.0
MMS3_k127_2356971_4 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 283.0
MMS3_k127_2356971_5 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000069 278.0
MMS3_k127_2356971_6 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009064 242.0
MMS3_k127_2356971_7 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000008037 164.0
MMS3_k127_2356971_8 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000001656 153.0
MMS3_k127_2356971_9 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000002059 135.0
MMS3_k127_2365185_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 499.0
MMS3_k127_2365185_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 494.0
MMS3_k127_2365185_10 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000007403 177.0
MMS3_k127_2365185_11 Spondin_N - - - 0.00000000000000000000000000000000000000000004927 168.0
MMS3_k127_2365185_12 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000003015 93.0
MMS3_k127_2365185_13 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.000000000000172 70.0
MMS3_k127_2365185_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 434.0
MMS3_k127_2365185_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 353.0
MMS3_k127_2365185_4 Protein of unknown function (DUF1631) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 338.0
MMS3_k127_2365185_5 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 305.0
MMS3_k127_2365185_6 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 314.0
MMS3_k127_2365185_7 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002501 281.0
MMS3_k127_2365185_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000001992 239.0
MMS3_k127_2365185_9 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000001908 187.0
MMS3_k127_2405336_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 8.825e-271 845.0
MMS3_k127_2405336_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.722e-249 775.0
MMS3_k127_2405336_10 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 324.0
MMS3_k127_2405336_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 299.0
MMS3_k127_2405336_12 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005488 272.0
MMS3_k127_2405336_13 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000008781 262.0
MMS3_k127_2405336_14 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000003495 239.0
MMS3_k127_2405336_15 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001288 242.0
MMS3_k127_2405336_16 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000923 229.0
MMS3_k127_2405336_17 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.0000000000000000000000000000000000000000000000000000000000007845 213.0
MMS3_k127_2405336_18 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000000000000000000000000001987 204.0
MMS3_k127_2405336_19 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000000000000183 195.0
MMS3_k127_2405336_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 3.745e-211 661.0
MMS3_k127_2405336_20 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000000000000000000000000000000003641 177.0
MMS3_k127_2405336_21 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.000000000000000000000000000000000000000000000002306 180.0
MMS3_k127_2405336_22 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.0000000000000000000000000000000000000000000008858 171.0
MMS3_k127_2405336_23 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000000006992 153.0
MMS3_k127_2405336_24 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000005071 137.0
MMS3_k127_2405336_25 Preprotein translocase K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000002469 128.0
MMS3_k127_2405336_26 Iron-sulphur cluster assembly - - - 0.000000000000000000000000008056 110.0
MMS3_k127_2405336_27 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000007176 116.0
MMS3_k127_2405336_28 - - - - 0.0001691 49.0
MMS3_k127_2405336_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 592.0
MMS3_k127_2405336_4 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 568.0
MMS3_k127_2405336_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006981 559.0
MMS3_k127_2405336_6 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 490.0
MMS3_k127_2405336_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 482.0
MMS3_k127_2405336_8 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 370.0
MMS3_k127_2405336_9 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 346.0
MMS3_k127_2414724_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 353.0
MMS3_k127_2414724_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 347.0
MMS3_k127_2414724_2 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000122 160.0
MMS3_k127_2461446_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1261.0
MMS3_k127_2461446_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 0.0 1102.0
MMS3_k127_2461446_10 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 520.0
MMS3_k127_2461446_11 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 509.0
MMS3_k127_2461446_12 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 483.0
MMS3_k127_2461446_13 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 456.0
MMS3_k127_2461446_14 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 449.0
MMS3_k127_2461446_15 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 426.0
MMS3_k127_2461446_16 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 407.0
MMS3_k127_2461446_17 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 412.0
MMS3_k127_2461446_18 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 411.0
MMS3_k127_2461446_19 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 413.0
MMS3_k127_2461446_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.828e-305 951.0
MMS3_k127_2461446_20 PFAM FAD linked oxidase domain protein K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 396.0
MMS3_k127_2461446_21 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 379.0
MMS3_k127_2461446_22 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 363.0
MMS3_k127_2461446_23 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 337.0
MMS3_k127_2461446_24 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 327.0
MMS3_k127_2461446_25 Dehydrogenase reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 312.0
MMS3_k127_2461446_26 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030234,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 260.0
MMS3_k127_2461446_27 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001739 258.0
MMS3_k127_2461446_28 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009112 252.0
MMS3_k127_2461446_29 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000634 225.0
MMS3_k127_2461446_3 Molecular chaperone. Has ATPase activity K04079 - - 1.205e-274 857.0
MMS3_k127_2461446_30 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000209 190.0
MMS3_k127_2461446_31 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000001731 178.0
MMS3_k127_2461446_32 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000002388 177.0
MMS3_k127_2461446_33 CheC-like family K03409 - - 0.00000000000000000000000000000000000000000002342 168.0
MMS3_k127_2461446_34 - - - - 0.0000000000000000000000000000000000000001265 159.0
MMS3_k127_2461446_35 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000000000000000000000178 146.0
MMS3_k127_2461446_36 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000002071 141.0
MMS3_k127_2461446_37 GtrA-like protein - - - 0.00000000000000000000000000000000006014 140.0
MMS3_k127_2461446_38 S4 RNA-binding domain K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000000002018 134.0
MMS3_k127_2461446_39 - - - - 0.000000000000000000000000000004681 128.0
MMS3_k127_2461446_4 FAD linked oxidase K00104 - 1.1.3.15 5.887e-245 764.0
MMS3_k127_2461446_40 histidine kinase A domain protein - - - 0.00000000000000000000000000007752 127.0
MMS3_k127_2461446_41 Protein of unknown function (DUF3301) - - - 0.000000000000000000007138 95.0
MMS3_k127_2461446_42 - - - - 0.00000000000000002581 84.0
MMS3_k127_2461446_43 - - - - 0.000000000000248 75.0
MMS3_k127_2461446_44 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000393 58.0
MMS3_k127_2461446_5 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 5.345e-211 663.0
MMS3_k127_2461446_6 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 525.0
MMS3_k127_2461446_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 520.0
MMS3_k127_2461446_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 521.0
MMS3_k127_2461446_9 PFAM amine oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 517.0
MMS3_k127_2493072_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 2.225e-213 667.0
MMS3_k127_2493072_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 349.0
MMS3_k127_2493072_10 Squalene/phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000003202 224.0
MMS3_k127_2493072_11 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000001572 200.0
MMS3_k127_2493072_12 - - - - 0.000000000000000000000000000000000000000001959 166.0
MMS3_k127_2493072_13 protein conserved in bacteria K05527,K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000002703 156.0
MMS3_k127_2493072_14 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000005337 156.0
MMS3_k127_2493072_16 RmuC family K09760 - - 0.000000007478 58.0
MMS3_k127_2493072_2 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 340.0
MMS3_k127_2493072_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 338.0
MMS3_k127_2493072_4 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 324.0
MMS3_k127_2493072_5 pfam php K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 317.0
MMS3_k127_2493072_6 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 307.0
MMS3_k127_2493072_7 PFAM HhH-GPD K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004161 255.0
MMS3_k127_2493072_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005403 246.0
MMS3_k127_2493072_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005121 245.0
MMS3_k127_252241_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 1.593e-240 766.0
MMS3_k127_252241_1 Helicase K03722 - 3.6.4.12 2.918e-214 683.0
MMS3_k127_252241_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000003622 218.0
MMS3_k127_252241_11 COG1214 Inactive homolog of metal-dependent proteases K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000001252 211.0
MMS3_k127_252241_12 - - - - 0.0000000000000000000000000000000000000000002674 164.0
MMS3_k127_252241_13 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000006971 159.0
MMS3_k127_252241_14 Belongs to the ArsC family - - - 0.000000000000000000000000000000000002472 140.0
MMS3_k127_252241_15 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K01183,K13695,K19303 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.2.1.14 0.0000000000000000000000000000000001811 138.0
MMS3_k127_252241_16 - - - - 0.0000000000000000000000000000000004722 136.0
MMS3_k127_252241_18 Tetratricopeptide repeat - - - 0.0000000000000000000000003328 110.0
MMS3_k127_252241_19 glyoxalase bleomycin resistance protein - - - 0.0003166 44.0
MMS3_k127_252241_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 583.0
MMS3_k127_252241_3 Aminotransferase, class I K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 550.0
MMS3_k127_252241_4 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 541.0
MMS3_k127_252241_5 PFAM Type II secretion system protein E - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 469.0
MMS3_k127_252241_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 463.0
MMS3_k127_252241_7 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 407.0
MMS3_k127_252241_8 short-chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 319.0
MMS3_k127_252241_9 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000002664 231.0
MMS3_k127_2540789_0 COG0501 Zn-dependent protease with chaperone function K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 597.0
MMS3_k127_2540789_1 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 285.0
MMS3_k127_2540789_2 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003525 243.0
MMS3_k127_2540789_3 Desulfoferrodoxin K05919 - 1.15.1.2 0.00000000000000000000000000000002453 132.0
MMS3_k127_2540789_4 ERAD pathway - - - 0.0000000000001942 80.0
MMS3_k127_2561862_0 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 4.649e-220 692.0
MMS3_k127_2561862_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 413.0
MMS3_k127_2561862_10 - - - - 0.00000000000005274 78.0
MMS3_k127_2561862_11 Rieske [2Fe-2S] domain - - - 0.0000000000001079 76.0
MMS3_k127_2561862_12 Putative 2OG-Fe(II) oxygenase - - - 0.0000000143 64.0
MMS3_k127_2561862_13 ribulose bisphosphate carboxylase, small K01602 - 4.1.1.39 0.000007434 53.0
MMS3_k127_2561862_2 deaminated base DNA N-glycosylase activity K03648,K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001525 281.0
MMS3_k127_2561862_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004066 262.0
MMS3_k127_2561862_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005551 260.0
MMS3_k127_2561862_5 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.0000000000000000000000000000000000000000000000000000004163 198.0
MMS3_k127_2561862_6 Low-potential electron donor to a number of redox enzymes K03839,K03840 - - 0.0000000000000000000000000000000000000000000000000004132 189.0
MMS3_k127_2561862_7 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000587 197.0
MMS3_k127_2561862_8 SET domain - - - 0.00000000000000000000000000000000000000000002951 166.0
MMS3_k127_2561862_9 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000000000000000001302 146.0
MMS3_k127_257657_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1231.0
MMS3_k127_257657_1 C-terminal, D2-small domain, of ClpB protein K03694 - - 0.0 1069.0
MMS3_k127_257657_10 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 291.0
MMS3_k127_257657_11 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000008565 250.0
MMS3_k127_257657_12 pseudouridine synthase activity K06178,K06181 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000004506 239.0
MMS3_k127_257657_13 Protein of unknown function (DUF489) K07153 - - 0.0000000000000000000000000000000000000000000000000000000000001783 220.0
MMS3_k127_257657_14 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000007698 182.0
MMS3_k127_257657_15 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000001758 169.0
MMS3_k127_257657_16 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000003505 139.0
MMS3_k127_257657_17 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000002275 121.0
MMS3_k127_257657_18 protein acetylation - - - 0.00000000000000000000000000002371 123.0
MMS3_k127_257657_19 Type II secretory pathway, component - - - 0.000000000000000000000000001619 123.0
MMS3_k127_257657_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 1.462e-297 931.0
MMS3_k127_257657_20 TIGRFAM cold shock domain protein CspD K03704 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006275,GO:0006355,GO:0006950,GO:0008150,GO:0008156,GO:0009266,GO:0009409,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000001563 109.0
MMS3_k127_257657_3 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 2.5e-230 719.0
MMS3_k127_257657_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.618e-203 641.0
MMS3_k127_257657_5 protease with the C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 578.0
MMS3_k127_257657_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 531.0
MMS3_k127_257657_7 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 484.0
MMS3_k127_257657_8 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 464.0
MMS3_k127_257657_9 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 443.0
MMS3_k127_2576969_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1332.0
MMS3_k127_2576969_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 5.045e-224 717.0
MMS3_k127_2576969_10 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000002635 239.0
MMS3_k127_2576969_11 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000004183 228.0
MMS3_k127_2576969_12 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000000000000000000000000008021 204.0
MMS3_k127_2576969_13 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000299 146.0
MMS3_k127_2576969_14 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000008367 119.0
MMS3_k127_2576969_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 521.0
MMS3_k127_2576969_3 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 485.0
MMS3_k127_2576969_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 394.0
MMS3_k127_2576969_5 PFAM oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 386.0
MMS3_k127_2576969_6 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 382.0
MMS3_k127_2576969_7 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 361.0
MMS3_k127_2576969_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 334.0
MMS3_k127_2576969_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001118 268.0
MMS3_k127_2578031_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.079e-295 924.0
MMS3_k127_2578031_1 Class II Aldolase and Adducin N-terminal domain - - - 1.436e-292 910.0
MMS3_k127_2578031_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 467.0
MMS3_k127_2578031_11 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 441.0
MMS3_k127_2578031_12 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 407.0
MMS3_k127_2578031_13 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 381.0
MMS3_k127_2578031_14 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009373 376.0
MMS3_k127_2578031_15 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 355.0
MMS3_k127_2578031_16 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 315.0
MMS3_k127_2578031_17 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 301.0
MMS3_k127_2578031_19 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001288 272.0
MMS3_k127_2578031_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 8.588e-260 838.0
MMS3_k127_2578031_20 PFAM Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004729 267.0
MMS3_k127_2578031_21 site-specific DNA-methyltransferase (adenine-specific) activity K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000006367 275.0
MMS3_k127_2578031_22 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000007268 228.0
MMS3_k127_2578031_23 Aspartyl asparaginyl beta-hydroxylase K12979 - - 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
MMS3_k127_2578031_24 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000001022 215.0
MMS3_k127_2578031_25 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000001434 206.0
MMS3_k127_2578031_26 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000002937 188.0
MMS3_k127_2578031_27 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000003042 187.0
MMS3_k127_2578031_28 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000004693 173.0
MMS3_k127_2578031_29 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000106 172.0
MMS3_k127_2578031_3 Peptidase C39 family K06147 - - 1.547e-250 804.0
MMS3_k127_2578031_30 FHA domain - - - 0.0000000000000000000000000000000000000248 152.0
MMS3_k127_2578031_31 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003125 135.0
MMS3_k127_2578031_32 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000001554 132.0
MMS3_k127_2578031_33 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000746 112.0
MMS3_k127_2578031_34 Domain of unknown function (DUF4156) - - - 0.0000000000000000000003934 99.0
MMS3_k127_2578031_35 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.00000000000000000001655 96.0
MMS3_k127_2578031_36 Haem-degrading - - - 0.0000000000000004256 80.0
MMS3_k127_2578031_37 - - - - 0.00000000000001259 78.0
MMS3_k127_2578031_38 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.000001529 50.0
MMS3_k127_2578031_4 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 3.84e-217 683.0
MMS3_k127_2578031_40 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.0000817 47.0
MMS3_k127_2578031_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 3.99e-205 646.0
MMS3_k127_2578031_6 Peptidase C39 family K06147 - - 1.503e-202 641.0
MMS3_k127_2578031_7 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 599.0
MMS3_k127_2578031_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 582.0
MMS3_k127_2578031_9 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 499.0
MMS3_k127_2580288_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1659.0
MMS3_k127_2580288_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0 1086.0
MMS3_k127_2580288_10 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 337.0
MMS3_k127_2580288_11 PFAM isochorismatase hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 340.0
MMS3_k127_2580288_12 protein required for cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 336.0
MMS3_k127_2580288_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001655 287.0
MMS3_k127_2580288_14 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000000000000482 199.0
MMS3_k127_2580288_2 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1037.0
MMS3_k127_2580288_3 Glucose inhibited division protein A K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.293e-211 662.0
MMS3_k127_2580288_4 the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 536.0
MMS3_k127_2580288_5 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 500.0
MMS3_k127_2580288_6 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 482.0
MMS3_k127_2580288_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 458.0
MMS3_k127_2580288_8 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 452.0
MMS3_k127_2580288_9 DMSO reductase anchor subunit (DmsC) K21309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 438.0
MMS3_k127_2589502_0 ATP-dependent helicase K03579 - 3.6.4.13 4.142e-283 892.0
MMS3_k127_2589502_1 Phosphoesterase family K01114 - 3.1.4.3 3.78e-266 829.0
MMS3_k127_2589502_10 HNH nucleases - - - 0.0000000000000000000000000000000000000000000249 164.0
MMS3_k127_2589502_11 - - - - 0.00000000000000000000000000000000000000000006014 171.0
MMS3_k127_2589502_12 surface antigen - - - 0.0000000000000000000000000000004352 133.0
MMS3_k127_2589502_13 Putative quorum-sensing-regulated virulence factor K09954 - - 0.0000000000000000000000001542 107.0
MMS3_k127_2589502_15 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000001289 79.0
MMS3_k127_2589502_16 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000003592 53.0
MMS3_k127_2589502_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 564.0
MMS3_k127_2589502_3 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 447.0
MMS3_k127_2589502_4 transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 366.0
MMS3_k127_2589502_5 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 311.0
MMS3_k127_2589502_6 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004742 258.0
MMS3_k127_2589502_7 Belongs to the UPF0502 family K09915 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000001431 241.0
MMS3_k127_2589502_8 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K13818 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000004539 198.0
MMS3_k127_2589502_9 Protein of unknown function DUF47 K02039,K07220 - - 0.00000000000000000000000000000000000000000000000009725 184.0
MMS3_k127_2603151_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1204.0
MMS3_k127_2603151_1 TIGRFAM DNA helicase II K03657 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006289,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0022607,GO:0031297,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0042802,GO:0043142,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045005,GO:0046483,GO:0050896,GO:0051259,GO:0051260,GO:0051276,GO:0051716,GO:0065003,GO:0070035,GO:0070581,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 1.094e-299 934.0
MMS3_k127_2603151_10 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 428.0
MMS3_k127_2603151_11 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 385.0
MMS3_k127_2603151_12 Pyridine nucleotide-disulphide oxidoreductase K05297 - 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 391.0
MMS3_k127_2603151_13 Phytanoyl-CoA dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 367.0
MMS3_k127_2603151_14 protein transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 360.0
MMS3_k127_2603151_15 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 336.0
MMS3_k127_2603151_16 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 333.0
MMS3_k127_2603151_17 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 302.0
MMS3_k127_2603151_18 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 311.0
MMS3_k127_2603151_19 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 298.0
MMS3_k127_2603151_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 8.319e-276 856.0
MMS3_k127_2603151_20 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 292.0
MMS3_k127_2603151_21 hydratase' K02554 - 4.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002803 278.0
MMS3_k127_2603151_22 Diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000002032 271.0
MMS3_k127_2603151_23 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002494 250.0
MMS3_k127_2603151_24 protein deglycation K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000001313 248.0
MMS3_k127_2603151_25 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000007057 234.0
MMS3_k127_2603151_26 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000008078 228.0
MMS3_k127_2603151_27 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000001017 226.0
MMS3_k127_2603151_28 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000000004414 209.0
MMS3_k127_2603151_29 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000003145 206.0
MMS3_k127_2603151_3 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.104e-227 717.0
MMS3_k127_2603151_30 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000005578 207.0
MMS3_k127_2603151_31 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000002918 206.0
MMS3_k127_2603151_32 Prokaryotic cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000001572 200.0
MMS3_k127_2603151_33 mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000001357 192.0
MMS3_k127_2603151_34 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000002941 190.0
MMS3_k127_2603151_35 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000002942 187.0
MMS3_k127_2603151_36 - - - - 0.000000000000000000000000000000000000000000003316 169.0
MMS3_k127_2603151_37 Protein of unknown function (DUF2846) - - - 0.00000000000000000000000000000000000000008557 155.0
MMS3_k127_2603151_38 - - - - 0.0000000000000000000000000000000000000002327 150.0
MMS3_k127_2603151_39 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000916 150.0
MMS3_k127_2603151_4 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 616.0
MMS3_k127_2603151_40 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000001185 154.0
MMS3_k127_2603151_41 toluene tolerance K07323 - - 0.0000000000000000000000000000000000002209 149.0
MMS3_k127_2603151_42 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000001045 141.0
MMS3_k127_2603151_43 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000005125 129.0
MMS3_k127_2603151_44 chorismate mutase K04092 - 5.4.99.5 0.0000000000000000000000000001866 116.0
MMS3_k127_2603151_45 rubredoxin - - - 0.0000000000000000000000000002502 114.0
MMS3_k127_2603151_46 cytochrome - - - 0.0000000000000000000000008046 107.0
MMS3_k127_2603151_47 - - - - 0.000000000000000000000001603 110.0
MMS3_k127_2603151_48 HxlR-like helix-turn-helix - - - 0.000000000000000000000002444 106.0
MMS3_k127_2603151_5 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 540.0
MMS3_k127_2603151_50 - - - - 0.0000000000000000005672 90.0
MMS3_k127_2603151_51 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.000000000000000002048 91.0
MMS3_k127_2603151_52 Acetyltransferase (GNAT) domain - - - 0.000000000000000002988 90.0
MMS3_k127_2603151_53 Pentapeptide repeats (9 copies) - - - 0.0000000000000000421 89.0
MMS3_k127_2603151_54 Putative prokaryotic signal transducing protein - - - 0.000000000000003262 78.0
MMS3_k127_2603151_55 Protein of unknown function (DUF2782) - - - 0.0000000000001814 76.0
MMS3_k127_2603151_56 Tellurite resistance protein TehB - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.00000000002864 72.0
MMS3_k127_2603151_57 - - - - 0.00002014 52.0
MMS3_k127_2603151_6 ResB-like family K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 520.0
MMS3_k127_2603151_7 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 469.0
MMS3_k127_2603151_8 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 443.0
MMS3_k127_2603151_9 Methyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 417.0
MMS3_k127_2604492_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 4.288e-300 927.0
MMS3_k127_2604492_1 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007182 569.0
MMS3_k127_2604492_10 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 357.0
MMS3_k127_2604492_11 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 344.0
MMS3_k127_2604492_12 Belongs to the aspartate glutamate racemases family K01779 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 336.0
MMS3_k127_2604492_13 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 323.0
MMS3_k127_2604492_14 PFAM Multiple antibiotic resistance (MarC)-related K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 299.0
MMS3_k127_2604492_15 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001237 274.0
MMS3_k127_2604492_16 Transcriptional regulator K07734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009334 271.0
MMS3_k127_2604492_17 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004939 271.0
MMS3_k127_2604492_18 helix_turn_helix ASNC type K03719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003492 257.0
MMS3_k127_2604492_19 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000005491 235.0
MMS3_k127_2604492_2 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000541 525.0
MMS3_k127_2604492_20 PFAM lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000009246 228.0
MMS3_k127_2604492_21 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000001398 206.0
MMS3_k127_2604492_22 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000000000000000000151 198.0
MMS3_k127_2604492_23 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000003685 196.0
MMS3_k127_2604492_24 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000001871 199.0
MMS3_k127_2604492_25 Protein conserved in bacteria K09984 - - 0.00000000000000000000000000000000000000000000002412 173.0
MMS3_k127_2604492_26 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000003155 170.0
MMS3_k127_2604492_27 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000005058 162.0
MMS3_k127_2604492_29 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.00000000000000000000000000000000000001625 150.0
MMS3_k127_2604492_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 503.0
MMS3_k127_2604492_30 MerR, DNA binding K19591 - - 0.00000000000000000000000000000000000007517 146.0
MMS3_k127_2604492_31 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000008475 149.0
MMS3_k127_2604492_32 Haem-degrading - - - 0.00000000000000000000000000000000006338 141.0
MMS3_k127_2604492_33 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000001511 127.0
MMS3_k127_2604492_34 - - - - 0.0000000000000000000000000000458 126.0
MMS3_k127_2604492_35 Thioredoxin domain - - - 0.00000000000000000000000000165 117.0
MMS3_k127_2604492_36 - - - - 0.0000000000000000005811 90.0
MMS3_k127_2604492_37 His Kinase A (phospho-acceptor) domain K10909 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 0.0000000000001252 76.0
MMS3_k127_2604492_38 Protein of unknown function (DUF2892) - - - 0.000000000005794 68.0
MMS3_k127_2604492_39 - - - - 0.00000002547 60.0
MMS3_k127_2604492_4 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 475.0
MMS3_k127_2604492_40 Redoxin domain protein - - - 0.0001134 46.0
MMS3_k127_2604492_5 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 454.0
MMS3_k127_2604492_6 SMART helix-turn-helix- domain containing protein AraC type K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 433.0
MMS3_k127_2604492_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 430.0
MMS3_k127_2604492_8 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 397.0
MMS3_k127_2604492_9 phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 357.0
MMS3_k127_2608116_0 Diguanylate cyclase - - - 0.0 1155.0
MMS3_k127_2608116_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 613.0
MMS3_k127_2608116_10 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 346.0
MMS3_k127_2608116_11 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 326.0
MMS3_k127_2608116_12 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 306.0
MMS3_k127_2608116_13 TIGRFAM molybdenum cofactor synthesis K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 297.0
MMS3_k127_2608116_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 286.0
MMS3_k127_2608116_15 Phosphoesterase family K21302 - 3.1.3.64 0.0000000000000000000000000000000000000000000000000000000000000000000001049 253.0
MMS3_k127_2608116_16 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000001189 243.0
MMS3_k127_2608116_17 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000008757 228.0
MMS3_k127_2608116_18 COG0784 FOG CheY-like receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000001443 228.0
MMS3_k127_2608116_19 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000003335 228.0
MMS3_k127_2608116_2 radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 575.0
MMS3_k127_2608116_20 pfam ammecr1 - - - 0.00000000000000000000000000000000000000000000000000000000000009263 218.0
MMS3_k127_2608116_21 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.00000000000000000000000000000000000000000000000000000000007851 213.0
MMS3_k127_2608116_22 PFAM Pentapeptide - - - 0.000000000000000000000000000000000000000002303 168.0
MMS3_k127_2608116_23 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000003224 154.0
MMS3_k127_2608116_24 FlhB HrpN YscU SpaS Family K04061 - - 0.00000000000000000000000001377 111.0
MMS3_k127_2608116_25 Flagellar hook-length control protein FliK - - - 0.0000000000000000000003289 111.0
MMS3_k127_2608116_26 - - - - 0.0000000000000000000175 94.0
MMS3_k127_2608116_27 Protein of unknown function, DUF481 K07283 - - 0.0000000000000003013 85.0
MMS3_k127_2608116_28 salt-induced outer membrane protein K07283 - - 0.00000000000001276 76.0
MMS3_k127_2608116_29 Belongs to the ParA family K04562 - - 0.00000005334 55.0
MMS3_k127_2608116_3 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 580.0
MMS3_k127_2608116_30 PA14 - - - 0.0000000634 59.0
MMS3_k127_2608116_31 Protein of unknown function (DUF2802) - - - 0.00003431 51.0
MMS3_k127_2608116_4 PFAM extracellular solute-binding protein family 1 K02027,K10227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 561.0
MMS3_k127_2608116_5 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009456 575.0
MMS3_k127_2608116_6 PFAM FAD dependent oxidoreductase K00116 - 1.1.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 558.0
MMS3_k127_2608116_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 433.0
MMS3_k127_2608116_8 major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 417.0
MMS3_k127_2608116_9 flagellar motor K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 329.0
MMS3_k127_2644897_0 acyl-CoA dehydrogenase K06445 - - 1.02e-301 942.0
MMS3_k127_2644897_1 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 1.44e-283 881.0
MMS3_k127_2644897_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 459.0
MMS3_k127_2644897_11 COG0331 (acyl-carrier-protein) S-malonyltransferase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 394.0
MMS3_k127_2644897_12 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 358.0
MMS3_k127_2644897_13 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 357.0
MMS3_k127_2644897_14 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 347.0
MMS3_k127_2644897_15 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002668 269.0
MMS3_k127_2644897_16 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003884 257.0
MMS3_k127_2644897_17 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000004027 235.0
MMS3_k127_2644897_18 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000001798 232.0
MMS3_k127_2644897_19 pilus assembly protein, PilZ K02676 - - 0.0000000000000000000000000000000000000000000000000000003129 195.0
MMS3_k127_2644897_2 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 5.193e-246 767.0
MMS3_k127_2644897_20 Thioesterase superfamily protein K10806 - - 0.000000000000000000000000000000000000000000008872 166.0
MMS3_k127_2644897_21 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000004013 135.0
MMS3_k127_2644897_22 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000005247 130.0
MMS3_k127_2644897_23 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000001058 95.0
MMS3_k127_2644897_24 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.00004519 48.0
MMS3_k127_2644897_3 PFAM 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.108e-229 728.0
MMS3_k127_2644897_4 AMP-binding enzyme K01897 - 6.2.1.3 4.28e-204 651.0
MMS3_k127_2644897_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 2.157e-195 616.0
MMS3_k127_2644897_6 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 611.0
MMS3_k127_2644897_7 associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 599.0
MMS3_k127_2644897_8 VWA-like domain (DUF2201) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 588.0
MMS3_k127_2644897_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 513.0
MMS3_k127_2683025_0 PFAM Glycosyl transferase family, a b domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 424.0
MMS3_k127_2683025_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 350.0
MMS3_k127_2683025_10 protein conserved in bacteria - - - 0.000000000000000000333 93.0
MMS3_k127_2683025_11 associated with various cellular activities - - - 0.0000002327 52.0
MMS3_k127_2683025_2 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 309.0
MMS3_k127_2683025_3 PKHD-type hydroxylase K07336 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007851 274.0
MMS3_k127_2683025_4 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000007695 217.0
MMS3_k127_2683025_5 Sel1-like repeats. K07126 - - 0.000000000000000000000000000000000000000000000000000000833 195.0
MMS3_k127_2683025_6 - - - - 0.0000000000000000000000000000000000000001299 156.0
MMS3_k127_2683025_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000001634 158.0
MMS3_k127_2683025_8 - - - - 0.00000000000000000000000007655 110.0
MMS3_k127_2683025_9 - - - - 0.00000000000000000000001888 100.0
MMS3_k127_2691973_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000831 535.0
MMS3_k127_2691973_1 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 475.0
MMS3_k127_2691973_10 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000004552 169.0
MMS3_k127_2691973_11 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000001979 166.0
MMS3_k127_2691973_12 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000000002461 153.0
MMS3_k127_2691973_13 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000004536 141.0
MMS3_k127_2691973_14 TonB C terminal K03832 - - 0.000000000000003197 86.0
MMS3_k127_2691973_15 Sulphur oxidation protein SoxZ - - - 0.000000000000004894 75.0
MMS3_k127_2691973_2 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007819 416.0
MMS3_k127_2691973_3 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 366.0
MMS3_k127_2691973_4 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 325.0
MMS3_k127_2691973_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 321.0
MMS3_k127_2691973_6 C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000069 260.0
MMS3_k127_2691973_7 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008162 257.0
MMS3_k127_2691973_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000001495 238.0
MMS3_k127_2691973_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000238 184.0
MMS3_k127_2717932_0 amino acid K20265 - - 2.016e-213 674.0
MMS3_k127_2717932_1 Sugar (and other) transporter - - - 5.899e-200 636.0
MMS3_k127_2717932_10 alpha beta - - - 0.00000000000000000000000000000000000002779 153.0
MMS3_k127_2717932_11 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000001095 145.0
MMS3_k127_2717932_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000008641 149.0
MMS3_k127_2717932_13 Protein of unknown function (DUF805) - - - 0.00000000000000000000000000000000001487 139.0
MMS3_k127_2717932_14 lysozyme - - - 0.0000000000000000000000000000000004128 138.0
MMS3_k127_2717932_15 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000199 126.0
MMS3_k127_2717932_2 Chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 586.0
MMS3_k127_2717932_3 NADH flavin oxidoreductases, Old Yellow Enzyme family K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 532.0
MMS3_k127_2717932_4 Flavoprotein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 501.0
MMS3_k127_2717932_5 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 429.0
MMS3_k127_2717932_6 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 406.0
MMS3_k127_2717932_7 HlyD membrane-fusion protein of T1SS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 404.0
MMS3_k127_2717932_8 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 357.0
MMS3_k127_2717932_9 PFAM PEBP family protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000001996 235.0
MMS3_k127_2743382_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 507.0
MMS3_k127_2743382_1 geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 435.0
MMS3_k127_2743382_2 Protein of unknown function (DUF3570) - - - 0.0000000000000005846 79.0
MMS3_k127_2743382_3 PFAM peptidase M48 Ste24p - - - 0.000000009872 66.0
MMS3_k127_2766969_0 DNA polymerase X family K02347 - - 3.699e-273 850.0
MMS3_k127_2766969_1 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 1.941e-247 776.0
MMS3_k127_2766969_10 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 313.0
MMS3_k127_2766969_11 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050355 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 303.0
MMS3_k127_2766969_12 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 312.0
MMS3_k127_2766969_13 Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair K03573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002839 250.0
MMS3_k127_2766969_14 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003075 247.0
MMS3_k127_2766969_15 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006077 248.0
MMS3_k127_2766969_16 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000002084 235.0
MMS3_k127_2766969_17 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000001319 244.0
MMS3_k127_2766969_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000002021 231.0
MMS3_k127_2766969_19 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000006975 223.0
MMS3_k127_2766969_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0016874,GO:0016879,GO:0016881,GO:0042802,GO:0044424,GO:0044464 6.3.2.45 2.41e-196 624.0
MMS3_k127_2766969_20 UPF0056 membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000006998 205.0
MMS3_k127_2766969_21 Molybdenum cofactor biosynthesis protein MoaE K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000002668 192.0
MMS3_k127_2766969_22 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000003232 195.0
MMS3_k127_2766969_23 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000001911 165.0
MMS3_k127_2766969_24 chain release factor K15034 - - 0.00000000000000000000000000000000000000000007418 165.0
MMS3_k127_2766969_25 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000004646 160.0
MMS3_k127_2766969_26 Sel1-like repeats. K07126 - - 0.000000000000000000002501 106.0
MMS3_k127_2766969_27 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000002845 92.0
MMS3_k127_2766969_28 diguanylate cyclase - - - 0.0000000000005257 75.0
MMS3_k127_2766969_29 - - - - 0.00000000001685 72.0
MMS3_k127_2766969_3 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 536.0
MMS3_k127_2766969_30 Forkhead associated domain - - - 0.000000002169 64.0
MMS3_k127_2766969_4 Methyltransferase K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000879 498.0
MMS3_k127_2766969_5 (ABC) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 447.0
MMS3_k127_2766969_6 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 375.0
MMS3_k127_2766969_7 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 349.0
MMS3_k127_2766969_8 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 342.0
MMS3_k127_2766969_9 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 320.0
MMS3_k127_2799949_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1173.0
MMS3_k127_2799949_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 2.981e-233 786.0
MMS3_k127_2799949_10 transcription factor binding - - - 0.00000000000000000000000000000000000000000000000005617 183.0
MMS3_k127_2799949_11 COG0784 FOG CheY-like receiver - - - 0.0000000000000000000000000000000000000000000000007111 177.0
MMS3_k127_2799949_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000002608 175.0
MMS3_k127_2799949_13 COG2346, Truncated hemoglobins K06886,K07006 - - 0.0000000000000000000000000000000000000000000002187 174.0
MMS3_k127_2799949_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000002268 142.0
MMS3_k127_2799949_15 Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000005793 117.0
MMS3_k127_2799949_16 - - - - 0.000000000000000000000000001178 126.0
MMS3_k127_2799949_17 YHYH protein - - - 0.0000000000000000002047 101.0
MMS3_k127_2799949_18 metal cluster binding - - - 0.000000195 59.0
MMS3_k127_2799949_2 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 9.746e-222 692.0
MMS3_k127_2799949_3 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 523.0
MMS3_k127_2799949_4 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 359.0
MMS3_k127_2799949_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 315.0
MMS3_k127_2799949_6 PFAM Dual specificity protein phosphatase K14165 - 3.1.3.16,3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 304.0
MMS3_k127_2799949_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007815 259.0
MMS3_k127_2799949_8 small GTP-binding protein K06945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000198 237.0
MMS3_k127_2799949_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000002704 196.0
MMS3_k127_2841444_0 Product type K16922 - - 5.932e-205 662.0
MMS3_k127_2841444_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 537.0
MMS3_k127_2841444_10 regulator of chromosome condensation, RCC1 K12549,K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000396 239.0
MMS3_k127_2841444_11 Type II secretory pathway component ExeA K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000002613 218.0
MMS3_k127_2841444_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000008363 203.0
MMS3_k127_2841444_13 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000004183 124.0
MMS3_k127_2841444_14 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000000000006381 86.0
MMS3_k127_2841444_15 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000008653 59.0
MMS3_k127_2841444_2 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 464.0
MMS3_k127_2841444_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 443.0
MMS3_k127_2841444_4 His Kinase A (phosphoacceptor) domain K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 442.0
MMS3_k127_2841444_5 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 389.0
MMS3_k127_2841444_6 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 317.0
MMS3_k127_2841444_7 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001451 282.0
MMS3_k127_2841444_8 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009044 264.0
MMS3_k127_2841444_9 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003228 244.0
MMS3_k127_2844318_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586 - 4.1.1.17,4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 559.0
MMS3_k127_2844318_1 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 479.0
MMS3_k127_2844318_10 Transcriptional - - - 0.0000000000000000000000004742 106.0
MMS3_k127_2844318_11 periplasmic protein - - - 0.00000000000000000005534 96.0
MMS3_k127_2844318_12 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000003049 67.0
MMS3_k127_2844318_13 Esterase PHB depolymerase K03932 - - 0.0000001301 64.0
MMS3_k127_2844318_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 435.0
MMS3_k127_2844318_3 Belongs to the GarS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 405.0
MMS3_k127_2844318_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 323.0
MMS3_k127_2844318_5 COG1051 ADP-ribose pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 310.0
MMS3_k127_2844318_6 SPFH domain / Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 310.0
MMS3_k127_2844318_7 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000005656 199.0
MMS3_k127_2844318_8 Membrane - - - 0.0000000000000000000000000000000000000000000006077 174.0
MMS3_k127_2844318_9 STAS-like domain of unknown function (DUF4325) - - - 0.00000000000000000000000005787 111.0
MMS3_k127_2847140_0 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 384.0
MMS3_k127_2847140_1 helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 387.0
MMS3_k127_2847140_2 PFAM Dinitrogenase reductase ADP-ribosyltransferase K05951 - 2.4.2.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 308.0
MMS3_k127_2847140_3 isochorismatase hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007426 241.0
MMS3_k127_2847140_4 Acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000001141 205.0
MMS3_k127_2847140_5 Isochorismatase family - - - 0.000000000000000000000000000000209 130.0
MMS3_k127_2847140_6 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K02588 - 1.18.6.1 0.000000000301 62.0
MMS3_k127_2863087_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 4.978e-288 902.0
MMS3_k127_2863087_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.376e-227 719.0
MMS3_k127_2863087_10 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000002059 224.0
MMS3_k127_2863087_11 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000361 215.0
MMS3_k127_2863087_12 Transcriptional regulator - - - 0.0000000003326 62.0
MMS3_k127_2863087_13 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000709 68.0
MMS3_k127_2863087_14 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.0006926 49.0
MMS3_k127_2863087_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 460.0
MMS3_k127_2863087_3 TonB-dependent Receptor Plug K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 349.0
MMS3_k127_2863087_4 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 327.0
MMS3_k127_2863087_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 329.0
MMS3_k127_2863087_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 301.0
MMS3_k127_2863087_7 Phosphoserine phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 295.0
MMS3_k127_2863087_8 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000005238 252.0
MMS3_k127_2863087_9 adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000005666 237.0
MMS3_k127_2864826_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 1.381e-253 789.0
MMS3_k127_2864826_1 Single-stranded-DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 1.516e-205 654.0
MMS3_k127_2864826_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 575.0
MMS3_k127_2864826_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 533.0
MMS3_k127_2864826_4 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000014 161.0
MMS3_k127_2864826_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000006078 144.0
MMS3_k127_2885302_0 Alpha-2-Macroglobulin - - - 0.0 1632.0
MMS3_k127_2885302_1 penicillin-binding protein K05367 - 2.4.1.129 7.783e-194 631.0
MMS3_k127_2885302_2 - - - - 0.00000000000000003749 82.0
MMS3_k127_2912777_0 AAA ATPase central domain protein - - - 2.083e-282 876.0
MMS3_k127_2912777_1 Glutathione S-Transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 286.0
MMS3_k127_2912777_2 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000001789 169.0
MMS3_k127_2912777_3 COG3209 Rhs family protein - - - 0.000000000000000000000009157 104.0
MMS3_k127_291564_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.585e-308 952.0
MMS3_k127_291564_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 7.55e-308 952.0
MMS3_k127_291564_10 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 385.0
MMS3_k127_291564_11 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 361.0
MMS3_k127_291564_12 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 352.0
MMS3_k127_291564_13 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 329.0
MMS3_k127_291564_14 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 284.0
MMS3_k127_291564_15 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001552 262.0
MMS3_k127_291564_16 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000721 252.0
MMS3_k127_291564_17 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000235 245.0
MMS3_k127_291564_18 phosphoribosyltransferase K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000005981 241.0
MMS3_k127_291564_19 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000001828 240.0
MMS3_k127_291564_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.177e-239 756.0
MMS3_k127_291564_20 PFAM MucB RseB K03598 - - 0.000000000000000000000000000000000000000000000000000000000000003421 230.0
MMS3_k127_291564_21 PFAM Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000002215 214.0
MMS3_k127_291564_22 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000002269 201.0
MMS3_k127_291564_23 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000002969 190.0
MMS3_k127_291564_24 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000211 112.0
MMS3_k127_291564_25 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0000000000000000000265 95.0
MMS3_k127_291564_26 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000001108 79.0
MMS3_k127_291564_27 Positive regulator of sigma(E), RseC/MucC - - - 0.00000000000006134 78.0
MMS3_k127_291564_28 Peptidoglycan-binding protein, CsiV - - - 0.000000000000278 81.0
MMS3_k127_291564_29 Histidine kinase K07678 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.000000000008764 70.0
MMS3_k127_291564_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 536.0
MMS3_k127_291564_31 Domain of unknown function (DUF4845) - - - 0.00001578 52.0
MMS3_k127_291564_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 499.0
MMS3_k127_291564_5 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 475.0
MMS3_k127_291564_6 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 475.0
MMS3_k127_291564_7 COG0668 Small-conductance mechanosensitive channel K16052 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 419.0
MMS3_k127_291564_8 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 407.0
MMS3_k127_291564_9 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 383.0
MMS3_k127_2916338_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 539.0
MMS3_k127_2916338_1 potassium channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 495.0
MMS3_k127_2916338_2 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009579 296.0
MMS3_k127_2916338_3 )-iron permease K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 292.0
MMS3_k127_2916338_4 protein probably involved in high-affinity Fe2 transport K07230 - - 0.0000000000000000000000000000000000000000000000000000000528 200.0
MMS3_k127_2916338_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000003491 166.0
MMS3_k127_2916338_6 Cupredoxin-like domain - - - 0.00000000000000000000005627 102.0
MMS3_k127_2916338_7 sulfurtransferase activity - - - 0.00000000000002752 74.0
MMS3_k127_2928297_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1026.0
MMS3_k127_2928297_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.479e-299 937.0
MMS3_k127_2928297_11 - - - - 0.0001416 44.0
MMS3_k127_2928297_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 505.0
MMS3_k127_2928297_3 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 502.0
MMS3_k127_2928297_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000001674 236.0
MMS3_k127_2928297_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000004198 195.0
MMS3_k127_2928297_6 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000002697 177.0
MMS3_k127_2928297_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000001324 160.0
MMS3_k127_2928297_8 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000002858 98.0
MMS3_k127_2928297_9 PAAR repeat-containing protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000003273 92.0
MMS3_k127_2929701_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1176.0
MMS3_k127_2929701_1 Putative diguanylate phosphodiesterase - - - 0.0 1015.0
MMS3_k127_2929701_10 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 414.0
MMS3_k127_2929701_11 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 409.0
MMS3_k127_2929701_12 Belongs to the UPF0276 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 407.0
MMS3_k127_2929701_13 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 403.0
MMS3_k127_2929701_14 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 385.0
MMS3_k127_2929701_15 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 374.0
MMS3_k127_2929701_16 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 373.0
MMS3_k127_2929701_17 Signal transduction histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 356.0
MMS3_k127_2929701_18 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 342.0
MMS3_k127_2929701_19 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 349.0
MMS3_k127_2929701_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 7.081e-276 871.0
MMS3_k127_2929701_20 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 320.0
MMS3_k127_2929701_21 Protein of unknown function (DUF3443) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 324.0
MMS3_k127_2929701_22 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 301.0
MMS3_k127_2929701_23 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 305.0
MMS3_k127_2929701_24 PFAM Methyltransferase type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007241 270.0
MMS3_k127_2929701_25 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001818 263.0
MMS3_k127_2929701_26 Secretion protein, HlyD K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002203 267.0
MMS3_k127_2929701_27 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001483 243.0
MMS3_k127_2929701_28 cell redox homeostasis K00221 - 4.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000002067 230.0
MMS3_k127_2929701_29 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000101 218.0
MMS3_k127_2929701_3 lysine 2,3-aminomutase K01843 - 5.4.3.2 2.382e-213 671.0
MMS3_k127_2929701_30 - K20150 - 1.16.9.1 0.0000000000000000000000000000000000000000000000000000000000001771 228.0
MMS3_k127_2929701_31 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.0000000000000000000000000000000000000000000000000000000001313 208.0
MMS3_k127_2929701_32 SCO1/SenC K07152 - - 0.000000000000000000000000000000000000000000000000000000001434 206.0
MMS3_k127_2929701_33 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000001578 200.0
MMS3_k127_2929701_34 Protein conserved in bacteria K04750 - - 0.0000000000000000000000000000000000000000000000000000006991 196.0
MMS3_k127_2929701_35 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000001302 191.0
MMS3_k127_2929701_36 Redoxin - - - 0.000000000000000000000000000000000000000000000000001939 188.0
MMS3_k127_2929701_37 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000000000004821 190.0
MMS3_k127_2929701_38 PFAM UspA domain protein K07090 - - 0.000000000000000000000000000000000000000000000000426 189.0
MMS3_k127_2929701_39 Dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000009991 183.0
MMS3_k127_2929701_4 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 606.0
MMS3_k127_2929701_40 coa-binding K06929 - - 0.0000000000000000000000000000000000000000000008493 169.0
MMS3_k127_2929701_41 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000001458 175.0
MMS3_k127_2929701_42 Transcriptional regulator, MarR K06075 - - 0.000000000000000000000000000000000000000000005641 167.0
MMS3_k127_2929701_43 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000002265 167.0
MMS3_k127_2929701_44 metalloendopeptidase activity - - - 0.000000000000000000000000000000000000000004474 165.0
MMS3_k127_2929701_45 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000001644 164.0
MMS3_k127_2929701_46 - - - - 0.0000000000000000000000000000000000000002028 156.0
MMS3_k127_2929701_47 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03805 - - 0.000000000000000000000000000000000000001623 153.0
MMS3_k127_2929701_48 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000009167 145.0
MMS3_k127_2929701_49 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000003867 149.0
MMS3_k127_2929701_5 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 557.0
MMS3_k127_2929701_50 Sulphur transport K07112 - - 0.000000000000000000000000000000002256 136.0
MMS3_k127_2929701_51 Protein of unknown function (DUF2844) - - - 0.00000000000000000000000000000007792 129.0
MMS3_k127_2929701_52 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000003682 123.0
MMS3_k127_2929701_53 Sulphur transport K07112 - - 0.00000000000000000000000000001474 125.0
MMS3_k127_2929701_54 - - - - 0.0000000000000000000000000003196 117.0
MMS3_k127_2929701_55 sulfur carrier activity K04085 - - 0.000000000000000000000000007244 111.0
MMS3_k127_2929701_56 PFAM RNA recognition motif - - - 0.000000000000000000000001728 106.0
MMS3_k127_2929701_58 - - - - 0.000000000000000000000008154 108.0
MMS3_k127_2929701_59 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.000000000000000000005732 100.0
MMS3_k127_2929701_6 Sugar (and other) transporter K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 561.0
MMS3_k127_2929701_60 - - - - 0.00000000000000000004572 92.0
MMS3_k127_2929701_61 Protein of unknown function (DUF3579) - - - 0.0000000000000000003791 93.0
MMS3_k127_2929701_62 Domain of unknown function (DUF202) K00389 - - 0.0000000000000001529 83.0
MMS3_k127_2929701_63 PFAM Forkhead-associated protein - - - 0.000000000000003279 80.0
MMS3_k127_2929701_64 - - - - 0.000000000000419 75.0
MMS3_k127_2929701_65 - - - - 0.000000000001459 74.0
MMS3_k127_2929701_67 Protein of unknown function (DUF2892) - - - 0.0000000002302 63.0
MMS3_k127_2929701_68 Sterile alpha motif. K21878 GO:0001894,GO:0001895,GO:0001917,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0007275,GO:0007399,GO:0007423,GO:0007600,GO:0007605,GO:0008092,GO:0008150,GO:0009653,GO:0009790,GO:0009887,GO:0009987,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0030507,GO:0031175,GO:0031410,GO:0031982,GO:0032391,GO:0032501,GO:0032502,GO:0035869,GO:0036064,GO:0042471,GO:0042472,GO:0042490,GO:0042592,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043583,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045494,GO:0046983,GO:0048468,GO:0048513,GO:0048562,GO:0048568,GO:0048598,GO:0048666,GO:0048699,GO:0048731,GO:0048839,GO:0048856,GO:0048869,GO:0048871,GO:0050877,GO:0050885,GO:0050905,GO:0050953,GO:0050954,GO:0050957,GO:0060113,GO:0060119,GO:0060122,GO:0060249,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090596,GO:0097458,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0120025,GO:0120036,GO:0120038 - 0.000001271 57.0
MMS3_k127_2929701_69 - - - - 0.0002123 47.0
MMS3_k127_2929701_7 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 473.0
MMS3_k127_2929701_70 Surface antigen - - - 0.0003127 52.0
MMS3_k127_2929701_8 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 431.0
MMS3_k127_2929701_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 436.0
MMS3_k127_2939860_0 Binding-protein-dependent transport system inner membrane component K02050 - - 3.699e-290 899.0
MMS3_k127_2939860_1 ATPases associated with a variety of cellular activities K02049 - - 4.733e-194 613.0
MMS3_k127_2939860_10 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 307.0
MMS3_k127_2939860_11 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 313.0
MMS3_k127_2939860_12 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 306.0
MMS3_k127_2939860_13 o-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 287.0
MMS3_k127_2939860_14 PFAM NnrS K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003614 290.0
MMS3_k127_2939860_15 Histidine kinase K02482,K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004226 288.0
MMS3_k127_2939860_16 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001289 259.0
MMS3_k127_2939860_17 Beta-lactamase enzyme family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004455 256.0
MMS3_k127_2939860_18 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003871 255.0
MMS3_k127_2939860_19 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004562 243.0
MMS3_k127_2939860_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 553.0
MMS3_k127_2939860_20 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007528 243.0
MMS3_k127_2939860_21 Thioredoxin K07396 - - 0.0000000000000000000000000000000000000000000000000000000000003181 217.0
MMS3_k127_2939860_22 Transcriptional regulator K01420 - - 0.0000000000000000000000000000000000000000000000000000000000009355 219.0
MMS3_k127_2939860_23 transcriptional regulator K09017 - - 0.0000000000000000000000000000000000000000000000000000001058 202.0
MMS3_k127_2939860_24 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000173 199.0
MMS3_k127_2939860_25 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000006366 193.0
MMS3_k127_2939860_26 response regulator receiver K13041 - - 0.00000000000000000000000000000000000000000000000000001556 195.0
MMS3_k127_2939860_27 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000001983 159.0
MMS3_k127_2939860_28 Glutathione S-transferase. Source PGD - - - 0.000000000000000000000000000000000000000014 161.0
MMS3_k127_2939860_29 Rhomboid family K02441 - - 0.00000000000000000000000000000000000000005337 159.0
MMS3_k127_2939860_3 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 540.0
MMS3_k127_2939860_30 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000001035 143.0
MMS3_k127_2939860_31 - - - - 0.0000000000000000000000000000002217 127.0
MMS3_k127_2939860_32 peroxiredoxin activity - - - 0.0000000000000000000000000000004846 128.0
MMS3_k127_2939860_33 Sulfurtransferase TusA - - - 0.0000000000000000000000000001346 115.0
MMS3_k127_2939860_34 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000002129 119.0
MMS3_k127_2939860_35 Domain of unknown function DUF302 - - - 0.00000000000000000000000000226 117.0
MMS3_k127_2939860_36 Domain of unknown function (DUF4282) - - - 0.00000000000000000000000001626 110.0
MMS3_k127_2939860_37 PFAM Cell wall hydrolase - - - 0.00000000000000000000000002781 117.0
MMS3_k127_2939860_38 - - - - 0.0000000000000000000000001322 117.0
MMS3_k127_2939860_39 Protein of unknown function (DUF2892) - - - 0.000000000000000000000004479 104.0
MMS3_k127_2939860_4 Putative heavy-metal-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 474.0
MMS3_k127_2939860_40 COG0457 FOG TPR repeat - - - 0.00000000000000000000005718 112.0
MMS3_k127_2939860_41 Domain of unknown function (DUF4389) - - - 0.0000000000000000000002561 100.0
MMS3_k127_2939860_42 - - - - 0.00000000000000003043 85.0
MMS3_k127_2939860_43 CHAD - - - 0.0000000002827 70.0
MMS3_k127_2939860_45 antisigma factor binding - - - 0.00005308 54.0
MMS3_k127_2939860_5 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 404.0
MMS3_k127_2939860_6 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 388.0
MMS3_k127_2939860_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 374.0
MMS3_k127_2939860_8 PFAM Patatin K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 357.0
MMS3_k127_2939860_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 319.0
MMS3_k127_2944060_0 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 527.0
MMS3_k127_2944060_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K19745 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 487.0
MMS3_k127_2944060_10 - - - - 0.00000000000002026 78.0
MMS3_k127_2944060_2 Tat pathway signal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 415.0
MMS3_k127_2944060_3 Bacterial transcriptional repressor C-terminal K16137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003253 278.0
MMS3_k127_2944060_4 acyl-coa hydrolase K01073 - 3.1.2.20 0.0000000000000000000000000000000000000000000000000000000001007 205.0
MMS3_k127_2944060_5 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000005236 188.0
MMS3_k127_2944060_6 Phage Tail Collar - - - 0.000000000000000000000000000000000000000000000000001707 188.0
MMS3_k127_2944060_7 phage Tail Collar - - - 0.0000000000000000000000000000000000000000000000005696 183.0
MMS3_k127_2944060_8 Phage Tail Collar Domain - - - 0.000000000000000000000000000000000000000005851 159.0
MMS3_k127_2944060_9 Sulfotransferase domain K13472 - - 0.00000000000000931 74.0
MMS3_k127_3013065_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 3.641e-316 996.0
MMS3_k127_3013065_1 Regulator of chromosome condensation (RCC1) repeat - - - 8.165e-232 739.0
MMS3_k127_3013065_10 ADP-heptose LPS heptosyltransferase - GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 314.0
MMS3_k127_3013065_11 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 314.0
MMS3_k127_3013065_12 lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007684 286.0
MMS3_k127_3013065_13 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000148 286.0
MMS3_k127_3013065_14 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000001104 251.0
MMS3_k127_3013065_15 transferase activity, transferring glycosyl groups K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000006002 242.0
MMS3_k127_3013065_16 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000057 251.0
MMS3_k127_3013065_17 YdjC-like protein - - - 0.000000000000000000000000000000000000000000000000000004625 200.0
MMS3_k127_3013065_18 PFAM Isochorismatase - - - 0.000000000000000000000000000000000000000000000000000008482 195.0
MMS3_k127_3013065_19 2 iron, 2 sulfur cluster binding K07302,K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000005263 188.0
MMS3_k127_3013065_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.208e-205 663.0
MMS3_k127_3013065_20 - - - - 0.0000000000000000000000000000000000000001316 169.0
MMS3_k127_3013065_21 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000001579 150.0
MMS3_k127_3013065_22 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000001168 158.0
MMS3_k127_3013065_23 Heptosyltransferase III K02849 - - 0.000000000000000000000000000000000002347 151.0
MMS3_k127_3013065_24 Thioredoxin - - - 0.0000000000000000000000000000000005856 136.0
MMS3_k127_3013065_25 PFAM GtrA family protein - - - 0.0000000000000000000000000000001609 133.0
MMS3_k127_3013065_26 Phosphopantetheine attachment site - - - 0.00000000000000000000003372 100.0
MMS3_k127_3013065_27 Zinc-finger domain - - - 0.000000000000000000001316 95.0
MMS3_k127_3013065_28 O-antigen ligase like membrane protein K02847 - - 0.000000000007887 77.0
MMS3_k127_3013065_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 599.0
MMS3_k127_3013065_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 527.0
MMS3_k127_3013065_5 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 482.0
MMS3_k127_3013065_6 PFAM Glycosyl transferase family 2 K10012,K20534 - 2.4.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 422.0
MMS3_k127_3013065_7 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 378.0
MMS3_k127_3013065_8 glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 372.0
MMS3_k127_3013065_9 PFAM glycosyl transferase family 2 K12984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 329.0
MMS3_k127_3039551_0 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 355.0
MMS3_k127_3039551_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 342.0
MMS3_k127_3039551_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 293.0
MMS3_k127_3039551_3 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000001413 180.0
MMS3_k127_3039551_4 Mitochondrial biogenesis AIM24 - - - 0.000002895 52.0
MMS3_k127_3053648_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1017.0
MMS3_k127_3053648_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 1.109e-303 944.0
MMS3_k127_3053648_10 amino acid K07076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 574.0
MMS3_k127_3053648_11 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 542.0
MMS3_k127_3053648_12 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 522.0
MMS3_k127_3053648_13 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 486.0
MMS3_k127_3053648_14 Glutathione S-transferase K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0044424,GO:0044464,GO:0055114 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 454.0
MMS3_k127_3053648_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 438.0
MMS3_k127_3053648_16 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 398.0
MMS3_k127_3053648_17 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 392.0
MMS3_k127_3053648_18 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 392.0
MMS3_k127_3053648_19 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 383.0
MMS3_k127_3053648_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding K01652 - 2.2.1.6 2.5e-300 928.0
MMS3_k127_3053648_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 380.0
MMS3_k127_3053648_21 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 367.0
MMS3_k127_3053648_22 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 355.0
MMS3_k127_3053648_23 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 339.0
MMS3_k127_3053648_24 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 323.0
MMS3_k127_3053648_25 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 303.0
MMS3_k127_3053648_26 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 298.0
MMS3_k127_3053648_27 subunit 2 K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 298.0
MMS3_k127_3053648_28 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 288.0
MMS3_k127_3053648_29 Nitroreductase family K10679 - 1.5.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003231 282.0
MMS3_k127_3053648_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.081e-274 851.0
MMS3_k127_3053648_30 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005869 284.0
MMS3_k127_3053648_31 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001263 279.0
MMS3_k127_3053648_32 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000289 281.0
MMS3_k127_3053648_33 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004164 271.0
MMS3_k127_3053648_34 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001026 264.0
MMS3_k127_3053648_35 PFAM Glutathione S-transferase domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001528 264.0
MMS3_k127_3053648_36 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007441 255.0
MMS3_k127_3053648_37 cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000001186 250.0
MMS3_k127_3053648_38 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000007552 246.0
MMS3_k127_3053648_39 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000007521 246.0
MMS3_k127_3053648_4 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 3.286e-268 842.0
MMS3_k127_3053648_40 Protein of unknown function (DUF3999) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003314 250.0
MMS3_k127_3053648_41 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000001524 233.0
MMS3_k127_3053648_43 Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000005506 221.0
MMS3_k127_3053648_44 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000008399 218.0
MMS3_k127_3053648_45 - - - - 0.00000000000000000000000000000000000000000000000000000000002877 209.0
MMS3_k127_3053648_46 Tautomerase enzyme - - - 0.00000000000000000000000000000000000000000000000000000002149 199.0
MMS3_k127_3053648_47 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000007968 202.0
MMS3_k127_3053648_48 protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000165 198.0
MMS3_k127_3053648_49 protein conserved in bacteria K09938 - - 0.00000000000000000000000000000000000000000000000000005088 203.0
MMS3_k127_3053648_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.669e-268 835.0
MMS3_k127_3053648_50 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000005117 192.0
MMS3_k127_3053648_51 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000001235 188.0
MMS3_k127_3053648_52 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000003313 175.0
MMS3_k127_3053648_53 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000002423 177.0
MMS3_k127_3053648_54 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000568 172.0
MMS3_k127_3053648_55 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000003104 172.0
MMS3_k127_3053648_56 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000007222 166.0
MMS3_k127_3053648_57 Arsenate reductase and related K00537 - 1.20.4.1 0.00000000000000000000000000000000000000003885 154.0
MMS3_k127_3053648_58 YCII-related domain - - - 0.00000000000000000000000000000000000000725 149.0
MMS3_k127_3053648_59 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18901 - - 0.00000000000000000000000000000000000007281 153.0
MMS3_k127_3053648_6 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.911e-266 826.0
MMS3_k127_3053648_60 - - - - 0.000000000000000000000000000000000000259 143.0
MMS3_k127_3053648_61 isomerase activity - - - 0.0000000000000000000000000000000000197 138.0
MMS3_k127_3053648_62 MarR family - - - 0.0000000000000000000000000000000000239 140.0
MMS3_k127_3053648_63 LysM domain - - - 0.000000000000000000000000000001362 129.0
MMS3_k127_3053648_64 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000001867 121.0
MMS3_k127_3053648_65 Cytochrome o ubiquinol oxidase, subunit K02300 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009319,GO:0009486,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016491,GO:0019646,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070069,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1902494,GO:1902600 - 0.000000000000000000000004975 106.0
MMS3_k127_3053648_66 acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000001062 100.0
MMS3_k127_3053648_67 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000001334 100.0
MMS3_k127_3053648_68 - - - - 0.000000000000000000001181 99.0
MMS3_k127_3053648_69 - - - - 0.000000000000000005331 91.0
MMS3_k127_3053648_7 Part of a membrane complex involved in electron transport K03615 - - 7.06e-203 644.0
MMS3_k127_3053648_71 Protein of unknown function (DUF2970) - - - 0.000000000001088 70.0
MMS3_k127_3053648_72 chemotaxis K03406 - - 0.000000000002365 68.0
MMS3_k127_3053648_73 SnoaL-like polyketide cyclase - - - 0.0000000008293 65.0
MMS3_k127_3053648_74 OmpA-like transmembrane domain - - - 0.000000002187 65.0
MMS3_k127_3053648_75 HNH endonuclease - - - 0.000000007817 60.0
MMS3_k127_3053648_76 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.000008864 48.0
MMS3_k127_3053648_78 Predicted membrane protein (DUF2339) - - - 0.00008172 47.0
MMS3_k127_3053648_79 Domain of unknown function (DUF4124) - - - 0.0001724 51.0
MMS3_k127_3053648_8 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 597.0
MMS3_k127_3053648_9 Glycosyl hydrolases family 15 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 601.0
MMS3_k127_3063141_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 3.001e-319 989.0
MMS3_k127_3063141_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 6.046e-310 970.0
MMS3_k127_3063141_10 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000001634 123.0
MMS3_k127_3063141_11 - - - - 0.000000000000000000000000173 110.0
MMS3_k127_3063141_12 - - - - 0.00002536 53.0
MMS3_k127_3063141_2 Participates in both transcription termination and antitermination K02600 - - 8.964e-217 682.0
MMS3_k127_3063141_3 (ABC) transporter K12541 - - 7.562e-207 665.0
MMS3_k127_3063141_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 382.0
MMS3_k127_3063141_5 HlyD membrane-fusion protein of T1SS K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 333.0
MMS3_k127_3063141_6 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000001042 174.0
MMS3_k127_3063141_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000001507 151.0
MMS3_k127_3063141_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000005535 132.0
MMS3_k127_3063141_9 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000004244 144.0
MMS3_k127_3077702_0 SMART Nucleotide binding protein, PINc K07175 - - 2.156e-221 695.0
MMS3_k127_3077702_1 Domain of unknown function (DUF4931) K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 567.0
MMS3_k127_3077702_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 419.0
MMS3_k127_3077702_3 AI-2E family transporter K03548 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 362.0
MMS3_k127_3077702_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000008757 228.0
MMS3_k127_3077702_5 PFAM Amino acid-binding ACT K03567 - - 0.0000000000000000000000000000000000000000000000000000000000000004771 224.0
MMS3_k127_3077702_6 - - - - 0.000000000000000000001686 99.0
MMS3_k127_3077702_7 Nlpbdapx family lipoprotein K07287 - - 0.0000003629 57.0
MMS3_k127_3181655_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 2.795e-314 984.0
MMS3_k127_3181655_1 double-strand break repair protein AddB K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 637.0
MMS3_k127_3181655_10 Modulates RecA activity K03565 - - 0.000000000000000000000000006734 115.0
MMS3_k127_3181655_11 PilZ domain - - - 0.000000000001727 72.0
MMS3_k127_3181655_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 580.0
MMS3_k127_3181655_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 565.0
MMS3_k127_3181655_4 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 402.0
MMS3_k127_3181655_5 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 304.0
MMS3_k127_3181655_6 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000001905 203.0
MMS3_k127_3181655_7 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000007836 188.0
MMS3_k127_3181655_8 Haem-degrading - - - 0.00000000000000000000000000000000000001523 145.0
MMS3_k127_3181655_9 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000003729 126.0
MMS3_k127_3242119_0 Hydrophobe Amphiphile Efflux-1 (HAE1) K18138 - - 0.0 1552.0
MMS3_k127_3242119_1 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.0 1042.0
MMS3_k127_3242119_10 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 380.0
MMS3_k127_3242119_11 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 368.0
MMS3_k127_3242119_12 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 334.0
MMS3_k127_3242119_13 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 320.0
MMS3_k127_3242119_14 Stress responsive A/B Barrel Domain K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 322.0
MMS3_k127_3242119_15 pfam abc K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 307.0
MMS3_k127_3242119_16 SNARE associated Golgi protein K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 302.0
MMS3_k127_3242119_17 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002615 289.0
MMS3_k127_3242119_18 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000447 282.0
MMS3_k127_3242119_19 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001364 265.0
MMS3_k127_3242119_2 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 4.249e-270 843.0
MMS3_k127_3242119_20 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000002083 224.0
MMS3_k127_3242119_21 Glutaredoxin - - - 0.000000000000000000000000000000000000000002097 166.0
MMS3_k127_3242119_22 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000006782 155.0
MMS3_k127_3242119_23 NnrU protein - - - 0.0000000000000000000000000000000000000009249 158.0
MMS3_k127_3242119_24 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000003549 144.0
MMS3_k127_3242119_25 Cytochrome c K19713 - 1.8.2.2 0.00000000000000000000000003535 113.0
MMS3_k127_3242119_26 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000002114 106.0
MMS3_k127_3242119_28 Domain of unknown function (DUF202) - - - 0.000000000000006292 80.0
MMS3_k127_3242119_3 acid phosphatase activity - - - 8.954e-246 782.0
MMS3_k127_3242119_30 PEP-CTERM motif - - - 0.00007607 53.0
MMS3_k127_3242119_4 ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 605.0
MMS3_k127_3242119_5 Phosphoesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 590.0
MMS3_k127_3242119_6 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 567.0
MMS3_k127_3242119_7 Glycosyl transferase family group 2 K00752,K11936 - 2.4.1.212 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 458.0
MMS3_k127_3242119_8 Cache_2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 452.0
MMS3_k127_3242119_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 439.0
MMS3_k127_3249209_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.069e-253 785.0
MMS3_k127_3249209_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.14e-219 685.0
MMS3_k127_3249209_10 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 366.0
MMS3_k127_3249209_11 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 342.0
MMS3_k127_3249209_12 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 337.0
MMS3_k127_3249209_13 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 332.0
MMS3_k127_3249209_14 Protein of unknown function (DUF455) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 318.0
MMS3_k127_3249209_15 pfam mofrl K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 317.0
MMS3_k127_3249209_16 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 296.0
MMS3_k127_3249209_17 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009665 275.0
MMS3_k127_3249209_18 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000003727 260.0
MMS3_k127_3249209_19 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001552 247.0
MMS3_k127_3249209_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 4.446e-217 684.0
MMS3_k127_3249209_20 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002639 276.0
MMS3_k127_3249209_21 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001078 236.0
MMS3_k127_3249209_22 NUDIX domain K01515,K03574 - 3.6.1.13,3.6.1.55 0.000000000000000000000000000000000000000000005407 166.0
MMS3_k127_3249209_23 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000008462 153.0
MMS3_k127_3249209_24 - - - - 0.0000000000000000000000000000002677 133.0
MMS3_k127_3249209_25 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.000000000000003484 84.0
MMS3_k127_3249209_26 Sporulation related domain K03749 - - 0.00000000000000404 85.0
MMS3_k127_3249209_29 - - - - 0.0000006073 56.0
MMS3_k127_3249209_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.476e-203 643.0
MMS3_k127_3249209_30 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00001984 53.0
MMS3_k127_3249209_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 608.0
MMS3_k127_3249209_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 567.0
MMS3_k127_3249209_6 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 563.0
MMS3_k127_3249209_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 432.0
MMS3_k127_3249209_8 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 418.0
MMS3_k127_3249209_9 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 403.0
MMS3_k127_3267683_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1498.0
MMS3_k127_3267683_1 Diguanylate cyclase - - - 0.0 1097.0
MMS3_k127_3267683_10 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008414 254.0
MMS3_k127_3267683_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000001221 207.0
MMS3_k127_3267683_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000427 218.0
MMS3_k127_3267683_13 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000461 209.0
MMS3_k127_3267683_14 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.000000000000000000000000000000000000000000000000001968 189.0
MMS3_k127_3267683_15 Redoxin K02199 - - 0.000000000000000000000000000000000000000000000004758 177.0
MMS3_k127_3267683_16 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.00000000000000000000000000000000000000002758 157.0
MMS3_k127_3267683_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000319 151.0
MMS3_k127_3267683_18 Cytochrome C biogenesis protein - - - 0.00000000000000000000000000000000003497 139.0
MMS3_k127_3267683_19 PAS fold - - - 0.00000000000000000000000000000003244 142.0
MMS3_k127_3267683_2 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.155e-251 792.0
MMS3_k127_3267683_20 transcriptional - - - 0.000000000000000000000000009098 114.0
MMS3_k127_3267683_21 PFAM multicopper oxidase type - - - 0.0000000000000000000000002959 110.0
MMS3_k127_3267683_22 Domain of unknown function (DUF1330) - - - 0.0000000000000000000003955 98.0
MMS3_k127_3267683_23 Ca2 -binding protein (EF-Hand superfamily - - - 0.000000000000004172 83.0
MMS3_k127_3267683_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.887e-202 638.0
MMS3_k127_3267683_4 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 482.0
MMS3_k127_3267683_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 378.0
MMS3_k127_3267683_6 GPR1 FUN34 yaaH family protein K07034 GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006835,GO:0006846,GO:0006855,GO:0008028,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015077,GO:0015078,GO:0015123,GO:0015238,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015355,GO:0015360,GO:0015672,GO:0015711,GO:0015718,GO:0015740,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034220,GO:0035433,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0043893,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1902600,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 330.0
MMS3_k127_3267683_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 317.0
MMS3_k127_3267683_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 313.0
MMS3_k127_3267683_9 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008152,GO:0015886,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:0071944,GO:1901678 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 294.0
MMS3_k127_3286556_0 Belongs to the UPF0753 family K09822 - - 0.0 1348.0
MMS3_k127_3286556_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 5.157e-231 727.0
MMS3_k127_3286556_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008763 247.0
MMS3_k127_3286556_11 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000004516 242.0
MMS3_k127_3286556_12 Belongs to the P(II) protein family - - - 0.00000000000000000000000000000000000000000000000000000000005708 206.0
MMS3_k127_3286556_13 mercury ion transmembrane transporter activity K07213 - - 0.000000000000000000000000000000000000000000000000000000005613 201.0
MMS3_k127_3286556_14 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000002511 171.0
MMS3_k127_3286556_15 - - - - 0.00000000000000000000000001229 116.0
MMS3_k127_3286556_17 Cupin 2, conserved barrel domain protein - - - 0.00000000000004705 73.0
MMS3_k127_3286556_18 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000001122 73.0
MMS3_k127_3286556_19 Porin Gram-negative type K09476 - - 0.0001283 53.0
MMS3_k127_3286556_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 461.0
MMS3_k127_3286556_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 381.0
MMS3_k127_3286556_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 367.0
MMS3_k127_3286556_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 349.0
MMS3_k127_3286556_6 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 295.0
MMS3_k127_3286556_7 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003253 281.0
MMS3_k127_3286556_8 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000008602 264.0
MMS3_k127_3286556_9 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001138 253.0
MMS3_k127_3294742_0 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 1.196e-300 937.0
MMS3_k127_3294742_1 HypF finger - - - 7.478e-267 842.0
MMS3_k127_3294742_10 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 426.0
MMS3_k127_3294742_11 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 407.0
MMS3_k127_3294742_12 Mediates influx of magnesium ions - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 398.0
MMS3_k127_3294742_13 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 411.0
MMS3_k127_3294742_14 Asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 386.0
MMS3_k127_3294742_15 TIGRFAM alpha-L-glutamate ligase-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 374.0
MMS3_k127_3294742_16 ATP-grasp fold domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 363.0
MMS3_k127_3294742_17 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 344.0
MMS3_k127_3294742_18 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 342.0
MMS3_k127_3294742_19 cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 338.0
MMS3_k127_3294742_2 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 1.229e-231 723.0
MMS3_k127_3294742_20 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 339.0
MMS3_k127_3294742_21 ribonuclease BN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 317.0
MMS3_k127_3294742_22 PFAM Auxin Efflux Carrier K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 295.0
MMS3_k127_3294742_23 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 288.0
MMS3_k127_3294742_24 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000398 288.0
MMS3_k127_3294742_25 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001213 280.0
MMS3_k127_3294742_26 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000005438 248.0
MMS3_k127_3294742_27 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001253 232.0
MMS3_k127_3294742_28 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000001939 215.0
MMS3_k127_3294742_29 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000003325 215.0
MMS3_k127_3294742_3 BT1 family - - - 1.421e-220 696.0
MMS3_k127_3294742_30 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000004384 201.0
MMS3_k127_3294742_31 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000000454 176.0
MMS3_k127_3294742_32 Belongs to the UPF0225 family K09858 - - 0.000000000000000000000000000000000000000001446 160.0
MMS3_k127_3294742_33 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000003692 174.0
MMS3_k127_3294742_34 - - - - 0.0000000000000000000000000000000000000002953 155.0
MMS3_k127_3294742_35 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009898,GO:0010467,GO:0016020,GO:0016151,GO:0019538,GO:0019897,GO:0019898,GO:0031234,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:1901564 - 0.000000000000000000000000000000000000001051 151.0
MMS3_k127_3294742_36 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000000007677 141.0
MMS3_k127_3294742_37 Protein of unknown function (DUF3175) - - - 0.0000000000000000000000000000001413 125.0
MMS3_k127_3294742_38 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000002201 125.0
MMS3_k127_3294742_39 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000002502 117.0
MMS3_k127_3294742_4 ABC transporter K15738 - - 1.961e-219 695.0
MMS3_k127_3294742_40 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000000000000000008688 116.0
MMS3_k127_3294742_41 Cold shock K03704 - - 0.0000000000000000000000000003239 115.0
MMS3_k127_3294742_42 Protein of unknown function (DUF2288) - - - 0.00000000000000000000004004 104.0
MMS3_k127_3294742_43 PQ loop repeat K15383 - - 0.00000000000000000000005409 101.0
MMS3_k127_3294742_44 Poly (ADP-ribose) polymerase K15261 GO:0000166,GO:0001932,GO:0001933,GO:0001934,GO:0001959,GO:0001960,GO:0001961,GO:0002682,GO:0002683,GO:0003674,GO:0003824,GO:0003950,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006471,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010468,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0016740,GO:0016757,GO:0016763,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0023051,GO:0023056,GO:0023057,GO:0031323,GO:0031324,GO:0031325,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031401,GO:0032268,GO:0032269,GO:0032270,GO:0036094,GO:0036211,GO:0042325,GO:0042326,GO:0042327,GO:0042509,GO:0042531,GO:0042532,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045088,GO:0045824,GO:0045936,GO:0045937,GO:0046425,GO:0046426,GO:0046427,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050662,GO:0050730,GO:0050731,GO:0050732,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051248,GO:0051287,GO:0060255,GO:0060330,GO:0060331,GO:0060334,GO:0060336,GO:0060759,GO:0060760,GO:0060761,GO:0065007,GO:0070212,GO:0070403,GO:0071704,GO:0080090,GO:0080134,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1902214,GO:1902216,GO:1902531,GO:1902532,GO:1902533,GO:1904892,GO:1904893,GO:1904894 2.4.2.30 0.000000000000000000008639 101.0
MMS3_k127_3294742_45 Protein of unknown function (DUF465) - - - 0.0000000000000000004981 90.0
MMS3_k127_3294742_46 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000001536 93.0
MMS3_k127_3294742_47 PFAM RNA recognition motif - - - 0.0000000347 58.0
MMS3_k127_3294742_5 4-Hydroxyphenylpyruvate dioxygenase - - - 1.037e-213 668.0
MMS3_k127_3294742_6 Hydrogenase formation hypA family K04654 GO:0003674,GO:0005488,GO:0005506,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0036211,GO:0042165,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0070025,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 577.0
MMS3_k127_3294742_7 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 517.0
MMS3_k127_3294742_8 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 517.0
MMS3_k127_3294742_9 AIR synthase related protein, N-terminal domain K04655 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0018193,GO:0018198,GO:0018249,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046892,GO:0051604,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 467.0
MMS3_k127_3315224_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1619.0
MMS3_k127_3315224_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 8.516e-221 704.0
MMS3_k127_3315224_10 Part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000002584 179.0
MMS3_k127_3315224_11 - - - - 0.0000000000000000000000000000000002583 135.0
MMS3_k127_3315224_12 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000588 143.0
MMS3_k127_3315224_13 GIY-YIG catalytic domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000001715 100.0
MMS3_k127_3315224_14 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.000000000000001454 79.0
MMS3_k127_3315224_15 Histidine kinase K10441 - 3.6.3.17 0.000000000716 73.0
MMS3_k127_3315224_16 Peptidase propeptide and YPEB domain - - - 0.00000001055 57.0
MMS3_k127_3315224_2 SNARE associated Golgi protein K03975,K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 448.0
MMS3_k127_3315224_3 Protein kinase domain K11912,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 397.0
MMS3_k127_3315224_4 Histidine kinase K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 362.0
MMS3_k127_3315224_5 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0016783,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 350.0
MMS3_k127_3315224_6 PFAM Fructosamine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 349.0
MMS3_k127_3315224_7 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000000000000000000000000000000000000001064 227.0
MMS3_k127_3315224_8 - - - - 0.0000000000000000000000000000000000000000000000000000005957 198.0
MMS3_k127_3315224_9 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000138 207.0
MMS3_k127_3315880_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 564.0
MMS3_k127_3315880_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 548.0
MMS3_k127_3315880_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 466.0
MMS3_k127_3315880_3 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 445.0
MMS3_k127_3315880_4 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 346.0
MMS3_k127_3315880_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 297.0
MMS3_k127_3315880_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00210,K00220,K00800 - 1.3.1.12,1.3.1.43,2.5.1.19 0.00000000000000000000000000000000000000000000000000005455 189.0
MMS3_k127_3359496_0 Belongs to the NiCoT transporter (TC 2.A.52) family K08970 - - 1.142e-194 612.0
MMS3_k127_3359496_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 365.0
MMS3_k127_3359496_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000006162 159.0
MMS3_k127_3359496_3 Pfam Response regulator receiver - - - 0.0000000000000000000000000000000000004438 142.0
MMS3_k127_3359496_4 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000002367 70.0
MMS3_k127_3359496_5 - - - - 0.00000002159 55.0
MMS3_k127_3371087_0 DNA polymerase X family K02347 - - 1.623e-221 696.0
MMS3_k127_3371087_1 deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009212 587.0
MMS3_k127_3371087_2 PFAM ATPase associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 448.0
MMS3_k127_3371087_3 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 381.0
MMS3_k127_3371087_4 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 380.0
MMS3_k127_3371087_5 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 329.0
MMS3_k127_3371087_6 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000001864 239.0
MMS3_k127_3371087_7 - - - - 0.0000000000000000000000000000000000000000001817 161.0
MMS3_k127_3371087_8 Domain of unknown function (DUF4381) - - - 0.0000000000000000000000000007527 118.0
MMS3_k127_3371087_9 - - - - 0.0000000000000000001482 91.0
MMS3_k127_3386642_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0 1087.0
MMS3_k127_3386642_1 HlyD family secretion protein K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 496.0
MMS3_k127_3386642_11 - - - - 0.0000000000000002087 84.0
MMS3_k127_3386642_2 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 418.0
MMS3_k127_3386642_3 (ABC) transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 400.0
MMS3_k127_3386642_4 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 357.0
MMS3_k127_3386642_5 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008935 348.0
MMS3_k127_3386642_6 PFAM multicopper oxidase type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 317.0
MMS3_k127_3386642_7 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000007115 214.0
MMS3_k127_3386642_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000001641 111.0
MMS3_k127_3393101_0 TIGRFAM aminopeptidase N, Escherichia coli type K01256 - 3.4.11.2 0.0 1056.0
MMS3_k127_3393101_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 2.551e-203 638.0
MMS3_k127_3393101_10 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002803 269.0
MMS3_k127_3393101_11 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 GO:0003674,GO:0003824,GO:0008119,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008757,GO:0010035,GO:0010038,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0046690,GO:0050896 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000000958 248.0
MMS3_k127_3393101_12 aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000002564 164.0
MMS3_k127_3393101_13 DNA-J related protein - - - 0.000000000000000000000000000000000000000000324 164.0
MMS3_k127_3393101_14 HEAT repeats - - - 0.000000000000000000000000000000000000000002921 163.0
MMS3_k127_3393101_15 PFAM Uncharacterised protein family (UPF0153) K18475 - - 0.00000000000000000000000000000000000004204 159.0
MMS3_k127_3393101_16 - - - - 0.000000000000000000000000000000000003045 139.0
MMS3_k127_3393101_17 - - - - 0.000000000000000000000000000000008655 131.0
MMS3_k127_3393101_18 PFAM Type IV pilus assembly PilZ - - - 0.00000000000000000000000000000001333 131.0
MMS3_k127_3393101_19 PFAM Lytic K08309 - - 0.0000000000000000000000000000001888 131.0
MMS3_k127_3393101_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 481.0
MMS3_k127_3393101_20 - - - - 0.0000000000000000000000000000002579 129.0
MMS3_k127_3393101_21 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000002905 128.0
MMS3_k127_3393101_22 - - - - 0.000000000000000000000000000007011 123.0
MMS3_k127_3393101_23 - - - - 0.000000000000000000000000006982 112.0
MMS3_k127_3393101_24 Rieske-like [2Fe-2S] domain - - - 0.00000000000000000000000003413 110.0
MMS3_k127_3393101_25 Protein of unknown function (DUF2786) - - - 0.000000000000000000000007648 109.0
MMS3_k127_3393101_26 - - - - 0.00000000000000000000001584 107.0
MMS3_k127_3393101_28 small protein containing a coiled-coil domain - - - 0.000000000000004266 77.0
MMS3_k127_3393101_29 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000003429 78.0
MMS3_k127_3393101_3 Transglycosylase SLT domain K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 440.0
MMS3_k127_3393101_4 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000836 430.0
MMS3_k127_3393101_5 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 430.0
MMS3_k127_3393101_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 367.0
MMS3_k127_3393101_7 EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 347.0
MMS3_k127_3393101_8 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 327.0
MMS3_k127_3393101_9 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001302 275.0
MMS3_k127_3406305_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147 - - 1.934e-293 909.0
MMS3_k127_3406305_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 581.0
MMS3_k127_3406305_10 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000002263 211.0
MMS3_k127_3406305_11 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000000001893 182.0
MMS3_k127_3406305_12 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000000000298 155.0
MMS3_k127_3406305_13 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0000000000000000000000000000000131 127.0
MMS3_k127_3406305_14 STAS domain K20978 - - 0.000000000000000000000001012 106.0
MMS3_k127_3406305_15 Protein conserved in bacteria - - - 0.000000000000000006385 90.0
MMS3_k127_3406305_16 - - - - 0.000000000000000008761 92.0
MMS3_k127_3406305_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 553.0
MMS3_k127_3406305_3 Synthesizes selenophosphate from selenide and ATP K01008 GO:0000287,GO:0001887,GO:0003674,GO:0003824,GO:0004756,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009451,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019752,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0070329,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 518.0
MMS3_k127_3406305_4 PFAM Cation K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 429.0
MMS3_k127_3406305_5 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 429.0
MMS3_k127_3406305_6 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 397.0
MMS3_k127_3406305_7 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 GO:0001887,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016785,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043828,GO:0044237,GO:0044238,GO:0046483,GO:0070329,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 387.0
MMS3_k127_3406305_8 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 286.0
MMS3_k127_3406305_9 phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000007679 228.0
MMS3_k127_3429267_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.048e-302 929.0
MMS3_k127_3429267_1 Carboxysome shell peptide mid-region - - - 2.051e-232 743.0
MMS3_k127_3429267_10 BMC - - - 0.0000000000000000000000000000000000000000000000000006406 184.0
MMS3_k127_3429267_11 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml - - - 0.000000000000000000000000000000000000000009129 154.0
MMS3_k127_3429267_12 Ethanolamine utilisation protein EutN/carboxysome - - - 0.00000000000000000000000000000001356 128.0
MMS3_k127_3429267_13 Pterin 4 alpha carbinolamine dehydratase - - - 0.0000000000000000000000000000001909 124.0
MMS3_k127_3429267_14 - - - - 0.000000000000000000000000001316 116.0
MMS3_k127_3429267_15 - - - - 0.0000000000000001416 85.0
MMS3_k127_3429267_16 - - - - 0.000004491 55.0
MMS3_k127_3429267_2 TIGRFAM carboxysome shell carbonic anhydrase - - - 1.581e-204 647.0
MMS3_k127_3429267_3 LysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 518.0
MMS3_k127_3429267_4 BMC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 334.0
MMS3_k127_3429267_5 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002253 255.0
MMS3_k127_3429267_6 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000002257 227.0
MMS3_k127_3429267_7 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000008285 196.0
MMS3_k127_3429267_8 carboxysome shell protein - - - 0.0000000000000000000000000000000000000000000000000000008991 193.0
MMS3_k127_3429267_9 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000001201 195.0
MMS3_k127_3445220_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1146.0
MMS3_k127_3445220_1 CoA-binding domain protein K09181 - - 0.0 1054.0
MMS3_k127_3445220_10 von Willebrand factor (vWF) type A domain K02448 - - 5.687e-253 799.0
MMS3_k127_3445220_100 Sterol-binding domain protein K03690 - - 0.0000000000000000000000000000000000000005579 156.0
MMS3_k127_3445220_101 overlaps another CDS with the same product name K21019 - 2.7.7.65 0.000000000000000000000000000000000000000558 162.0
MMS3_k127_3445220_102 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000547 159.0
MMS3_k127_3445220_103 - - - - 0.0000000000000000000000000000000000000194 163.0
MMS3_k127_3445220_104 Sh3 type 3 domain protein K01361 - 3.4.21.96 0.000000000000000000000000000000000000115 151.0
MMS3_k127_3445220_105 KAP family P-loop domain - - - 0.00000000000000000000000000000000002335 151.0
MMS3_k127_3445220_106 - - - - 0.000000000000000000000000000000001275 147.0
MMS3_k127_3445220_107 YMGG-like Gly-zipper - - - 0.000000000000000000000000000000001334 136.0
MMS3_k127_3445220_108 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000002436 134.0
MMS3_k127_3445220_109 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000001221 127.0
MMS3_k127_3445220_11 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 5.168e-248 784.0
MMS3_k127_3445220_110 - - - - 0.00000000000000000000000000000003513 130.0
MMS3_k127_3445220_111 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000006302 121.0
MMS3_k127_3445220_112 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000001031 120.0
MMS3_k127_3445220_113 COG0668 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000896 123.0
MMS3_k127_3445220_114 sulfur carrier activity K04085 - - 0.0000000000000000000000000004135 117.0
MMS3_k127_3445220_115 - - - - 0.000000000000000000000000001194 115.0
MMS3_k127_3445220_116 - - - - 0.00000000000000000000000008199 121.0
MMS3_k127_3445220_117 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000007688 114.0
MMS3_k127_3445220_118 cheY-homologous receiver domain - - - 0.000000000000000000000002038 115.0
MMS3_k127_3445220_119 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000001173 101.0
MMS3_k127_3445220_12 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 5.927e-235 758.0
MMS3_k127_3445220_120 Protein of unknown function (DUF2892) - - - 0.000000000000000000001808 94.0
MMS3_k127_3445220_121 - - - - 0.000000000000000005701 84.0
MMS3_k127_3445220_122 - - - - 0.0000000000000001657 84.0
MMS3_k127_3445220_123 CheW-like domain - - - 0.0000000000000003777 85.0
MMS3_k127_3445220_124 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000006217 85.0
MMS3_k127_3445220_125 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000001501 81.0
MMS3_k127_3445220_126 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000005648 77.0
MMS3_k127_3445220_127 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000007322 73.0
MMS3_k127_3445220_128 - - - - 0.0000000000002137 75.0
MMS3_k127_3445220_129 - - - - 0.00000000002654 68.0
MMS3_k127_3445220_13 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 1.152e-232 729.0
MMS3_k127_3445220_130 Roadblock/LC7 domain K07131 - - 0.00000000003769 72.0
MMS3_k127_3445220_131 helix_turn_helix, arabinose operon control protein - - - 0.00000000004451 64.0
MMS3_k127_3445220_132 ATP synthase I chain K02116 - - 0.000000000104 68.0
MMS3_k127_3445220_133 Domain of unknown function (DUF4124) - - - 0.00000000123 66.0
MMS3_k127_3445220_134 - - - - 0.000000004609 59.0
MMS3_k127_3445220_135 Bacterial SH3 domain homologues K07184 - - 0.0000003811 61.0
MMS3_k127_3445220_14 argininosuccinate lyase K01755 - 4.3.2.1 9.446e-228 712.0
MMS3_k127_3445220_15 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.26e-224 702.0
MMS3_k127_3445220_16 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 2.412e-209 659.0
MMS3_k127_3445220_17 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 3.83e-209 657.0
MMS3_k127_3445220_18 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.083e-208 655.0
MMS3_k127_3445220_19 PFAM AMP-dependent synthetase and ligase - - - 1.121e-195 623.0
MMS3_k127_3445220_2 Peptidase family M3 K01414 - 3.4.24.70 1.103e-302 941.0
MMS3_k127_3445220_20 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 4.472e-195 655.0
MMS3_k127_3445220_21 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 591.0
MMS3_k127_3445220_22 Thiamine biosynthesis protein (ThiI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 544.0
MMS3_k127_3445220_23 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 530.0
MMS3_k127_3445220_24 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 536.0
MMS3_k127_3445220_25 Belongs to the dihydroorotate dehydrogenase family K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 519.0
MMS3_k127_3445220_26 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 506.0
MMS3_k127_3445220_27 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 504.0
MMS3_k127_3445220_28 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 475.0
MMS3_k127_3445220_29 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 487.0
MMS3_k127_3445220_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 5.588e-299 928.0
MMS3_k127_3445220_30 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 462.0
MMS3_k127_3445220_31 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969,K03574 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 473.0
MMS3_k127_3445220_32 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 444.0
MMS3_k127_3445220_33 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 427.0
MMS3_k127_3445220_34 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 414.0
MMS3_k127_3445220_35 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 414.0
MMS3_k127_3445220_36 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 403.0
MMS3_k127_3445220_37 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000068 400.0
MMS3_k127_3445220_38 chemotaxis, protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 410.0
MMS3_k127_3445220_39 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 396.0
MMS3_k127_3445220_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.869e-280 871.0
MMS3_k127_3445220_40 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 393.0
MMS3_k127_3445220_41 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 382.0
MMS3_k127_3445220_42 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 379.0
MMS3_k127_3445220_43 signal transduction histidine kinase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 370.0
MMS3_k127_3445220_44 Chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005896 364.0
MMS3_k127_3445220_45 Dimerisation domain of Zinc Transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 367.0
MMS3_k127_3445220_46 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 361.0
MMS3_k127_3445220_47 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 344.0
MMS3_k127_3445220_48 PFAM Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 346.0
MMS3_k127_3445220_49 PFAM sulfotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 346.0
MMS3_k127_3445220_5 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.27e-278 861.0
MMS3_k127_3445220_50 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 327.0
MMS3_k127_3445220_51 enzyme of heme biosynthesis K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 325.0
MMS3_k127_3445220_52 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 302.0
MMS3_k127_3445220_53 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 301.0
MMS3_k127_3445220_54 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 296.0
MMS3_k127_3445220_55 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 287.0
MMS3_k127_3445220_56 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001129 289.0
MMS3_k127_3445220_57 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002073 287.0
MMS3_k127_3445220_58 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001413 284.0
MMS3_k127_3445220_59 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002715 281.0
MMS3_k127_3445220_6 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 7.861e-272 850.0
MMS3_k127_3445220_60 Response regulator of the LytR AlgR family K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003358 277.0
MMS3_k127_3445220_61 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002016 263.0
MMS3_k127_3445220_62 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002096 271.0
MMS3_k127_3445220_63 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006375 267.0
MMS3_k127_3445220_64 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009107 265.0
MMS3_k127_3445220_65 Transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002206 258.0
MMS3_k127_3445220_66 acid phosphatase activity K01179,K21449 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000003707 264.0
MMS3_k127_3445220_67 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000468 246.0
MMS3_k127_3445220_68 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000009858 243.0
MMS3_k127_3445220_69 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000001161 240.0
MMS3_k127_3445220_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 8.599e-270 836.0
MMS3_k127_3445220_70 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000005362 238.0
MMS3_k127_3445220_71 Conserved hypothetical ATP binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002994 232.0
MMS3_k127_3445220_72 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000000002047 229.0
MMS3_k127_3445220_73 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000131 225.0
MMS3_k127_3445220_74 Transcriptional regulator K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0030551,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032561,GO:0035438,GO:0036094,GO:0043167,GO:0043168,GO:0046983,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000004685 227.0
MMS3_k127_3445220_75 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000001648 216.0
MMS3_k127_3445220_76 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000001934 217.0
MMS3_k127_3445220_77 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0000000000000000000000000000000000000000000000000000000000003299 226.0
MMS3_k127_3445220_78 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000000000000000000000003173 203.0
MMS3_k127_3445220_79 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000000000002686 206.0
MMS3_k127_3445220_8 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.509e-265 821.0
MMS3_k127_3445220_80 protein conserved in bacteria K09798 - - 0.0000000000000000000000000000000000000000000000000000001785 204.0
MMS3_k127_3445220_81 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000001903 200.0
MMS3_k127_3445220_82 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000004171 188.0
MMS3_k127_3445220_83 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000166 187.0
MMS3_k127_3445220_84 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000002039 186.0
MMS3_k127_3445220_85 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000004688 187.0
MMS3_k127_3445220_86 COG2801 Transposase and inactivated derivatives K07497 - - 0.00000000000000000000000000000000000000000000000003983 179.0
MMS3_k127_3445220_87 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000002011 176.0
MMS3_k127_3445220_88 - - - - 0.000000000000000000000000000000000000000000000002239 179.0
MMS3_k127_3445220_89 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000054 171.0
MMS3_k127_3445220_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.946e-257 797.0
MMS3_k127_3445220_90 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000000000002867 168.0
MMS3_k127_3445220_91 - - - - 0.0000000000000000000000000000000000000000000007102 169.0
MMS3_k127_3445220_92 PFAM Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000008673 172.0
MMS3_k127_3445220_93 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000238 162.0
MMS3_k127_3445220_94 PFAM phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000002578 162.0
MMS3_k127_3445220_95 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000003292 163.0
MMS3_k127_3445220_96 Response regulator receiver K02658 - - 0.000000000000000000000000000000000000000009225 156.0
MMS3_k127_3445220_97 Rhodanese-related sulfurtransferase K01011 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000489 155.0
MMS3_k127_3445220_98 Histidine kinase - - - 0.00000000000000000000000000000000000000007831 160.0
MMS3_k127_3445220_99 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000003736 154.0
MMS3_k127_3467363_0 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 3.298e-270 850.0
MMS3_k127_3467363_1 ATP-binding protein K16013 - - 1.346e-252 790.0
MMS3_k127_3467363_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002857 252.0
MMS3_k127_3467363_11 PFAM Signal transduction response regulator, receiver K13041 - - 0.00000000000000000000000000000000000000000000000000005553 194.0
MMS3_k127_3467363_12 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000001603 183.0
MMS3_k127_3467363_13 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000001658 141.0
MMS3_k127_3467363_14 - - - - 0.0000000000000000000309 94.0
MMS3_k127_3467363_15 - - - - 0.0000000000000939 73.0
MMS3_k127_3467363_17 Bacterial protein of unknown function (DUF883) - - - 0.000002366 53.0
MMS3_k127_3467363_2 cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 1.876e-223 704.0
MMS3_k127_3467363_3 ATP-binding protein K16012 - - 1.955e-220 698.0
MMS3_k127_3467363_4 oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 569.0
MMS3_k127_3467363_5 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 466.0
MMS3_k127_3467363_6 Transketolase, C-terminal domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 434.0
MMS3_k127_3467363_7 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 426.0
MMS3_k127_3467363_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 407.0
MMS3_k127_3467363_9 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 395.0
MMS3_k127_3484754_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1695.0
MMS3_k127_3484754_1 Belongs to the CarA family K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 601.0
MMS3_k127_3484754_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000631 219.0
MMS3_k127_3484754_3 - - - - 0.00000000000000001019 86.0
MMS3_k127_3539834_0 Lysozyme inhibitor LprI - - - 0.0 1105.0
MMS3_k127_3539834_1 Alpha-2-Macroglobulin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 312.0
MMS3_k127_3540800_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.994e-275 859.0
MMS3_k127_3540800_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 599.0
MMS3_k127_3540800_10 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001892 243.0
MMS3_k127_3540800_11 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 240.0
MMS3_k127_3540800_12 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000002332 218.0
MMS3_k127_3540800_13 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000001643 214.0
MMS3_k127_3540800_14 Transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000001289 196.0
MMS3_k127_3540800_15 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000001016 196.0
MMS3_k127_3540800_16 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000007177 185.0
MMS3_k127_3540800_17 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000001938 162.0
MMS3_k127_3540800_18 - - - - 0.00000000000000000000000000000007514 135.0
MMS3_k127_3540800_19 Rhodanese Homology Domain - - - 0.000000000000000000003735 93.0
MMS3_k127_3540800_2 protein conserved in bacteria K09800 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 552.0
MMS3_k127_3540800_20 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000003306 78.0
MMS3_k127_3540800_3 COG1030 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 518.0
MMS3_k127_3540800_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 529.0
MMS3_k127_3540800_5 Glycolate oxidase iron-sulfur subunit K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 498.0
MMS3_k127_3540800_6 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 436.0
MMS3_k127_3540800_7 COG1226 Kef-type K transport systems K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 400.0
MMS3_k127_3540800_8 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 399.0
MMS3_k127_3540800_9 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 355.0
MMS3_k127_3556758_0 ABC transporter transmembrane region K06147 - - 5.857e-252 790.0
MMS3_k127_3556758_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 362.0
MMS3_k127_3556758_2 Diguanylate cyclase (GGDEF domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009533 304.0
MMS3_k127_3556758_3 PFAM Rhodanese-like - - - 0.000000000000000000000000000000000000000000000000000000004104 202.0
MMS3_k127_3556758_4 ANTAR - - - 0.0000000000000000000000000000000000000339 152.0
MMS3_k127_3556758_5 transport system, periplasmic component - - - 0.00000000000000000000000000000000001726 148.0
MMS3_k127_3556758_6 response regulator receiver K07684 - - 0.000000000000000000000000000007594 119.0
MMS3_k127_3556758_7 PFAM Peptidase S24 S26A S26B, conserved region - - - 0.00000000000000000000001592 103.0
MMS3_k127_3620314_0 MMPL family - - - 0.0 1628.0
MMS3_k127_3620314_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 - 1.17.1.4 0.0 1066.0
MMS3_k127_3620314_10 PFAM Peptidase family M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 493.0
MMS3_k127_3620314_11 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K22270 - 1.14.13.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 484.0
MMS3_k127_3620314_12 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 462.0
MMS3_k127_3620314_13 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 458.0
MMS3_k127_3620314_14 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 455.0
MMS3_k127_3620314_15 Transglycosylase SLT domain K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 456.0
MMS3_k127_3620314_16 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K11178 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 420.0
MMS3_k127_3620314_17 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 398.0
MMS3_k127_3620314_18 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 394.0
MMS3_k127_3620314_19 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 370.0
MMS3_k127_3620314_2 Cation transporter/ATPase, N-terminus K01535 - 3.6.3.6 2.321e-311 977.0
MMS3_k127_3620314_20 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 364.0
MMS3_k127_3620314_21 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 351.0
MMS3_k127_3620314_22 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 353.0
MMS3_k127_3620314_23 Flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 310.0
MMS3_k127_3620314_24 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) K00216 - 1.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 294.0
MMS3_k127_3620314_25 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 293.0
MMS3_k127_3620314_26 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 285.0
MMS3_k127_3620314_27 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 287.0
MMS3_k127_3620314_28 isochorismatase K01252,K20261 - 3.3.2.1,3.3.2.15,6.3.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003712 276.0
MMS3_k127_3620314_29 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003213 272.0
MMS3_k127_3620314_3 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 5.331e-299 932.0
MMS3_k127_3620314_30 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001026 264.0
MMS3_k127_3620314_31 molybdenum ABC transporter, periplasmic K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000012 267.0
MMS3_k127_3620314_32 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000004674 268.0
MMS3_k127_3620314_33 Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001099 276.0
MMS3_k127_3620314_34 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001869 260.0
MMS3_k127_3620314_35 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000484 249.0
MMS3_k127_3620314_36 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003651 245.0
MMS3_k127_3620314_37 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005833 248.0
MMS3_k127_3620314_38 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000003209 240.0
MMS3_k127_3620314_39 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000004306 229.0
MMS3_k127_3620314_4 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.866e-289 894.0
MMS3_k127_3620314_40 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000001269 217.0
MMS3_k127_3620314_41 Transcriptional regulator, ModE family K02019 - - 0.0000000000000000000000000000000000000000000000000000000000003516 220.0
MMS3_k127_3620314_42 - - - - 0.000000000000000000000000000000000000000000000000000000000007372 212.0
MMS3_k127_3620314_43 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000001995 203.0
MMS3_k127_3620314_44 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity - - - 0.0000000000000000000000000000000000000000000000003028 185.0
MMS3_k127_3620314_45 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000001833 171.0
MMS3_k127_3620314_46 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000004565 165.0
MMS3_k127_3620314_47 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000001573 126.0
MMS3_k127_3620314_48 Domain of unknown function (DUF1840) - - - 0.0000000000000000000000000002946 116.0
MMS3_k127_3620314_49 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000001871 109.0
MMS3_k127_3620314_5 chorismate binding enzyme K13063 - 2.6.1.86 2.237e-207 663.0
MMS3_k127_3620314_50 transcriptional regulator - - - 0.0000000000000000000000003139 114.0
MMS3_k127_3620314_51 Cytochrome c - - - 0.000000000000000000000001514 106.0
MMS3_k127_3620314_52 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000003633 98.0
MMS3_k127_3620314_53 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.0000000000000000000929 94.0
MMS3_k127_3620314_55 Domain of unknown function (DUF4184) - - - 0.000000005786 59.0
MMS3_k127_3620314_56 - - - - 0.0000004241 55.0
MMS3_k127_3620314_6 Outer membrane efflux protein - - - 8.316e-195 619.0
MMS3_k127_3620314_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 562.0
MMS3_k127_3620314_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 520.0
MMS3_k127_3620314_9 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 488.0
MMS3_k127_3660512_0 PFAM Type II secretion system protein E K02454 - - 7.254e-216 682.0
MMS3_k127_3660512_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 4.887e-203 646.0
MMS3_k127_3660512_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000882 261.0
MMS3_k127_3660512_11 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000436 241.0
MMS3_k127_3660512_12 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000006481 233.0
MMS3_k127_3660512_13 Conserved region in glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000001563 205.0
MMS3_k127_3660512_14 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000001003 196.0
MMS3_k127_3660512_15 PFAM Amino acid-binding ACT K03567 - - 0.000000000000000000000000000000000000000000000000000006149 195.0
MMS3_k127_3660512_16 general secretion pathway protein K02456 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000005197 179.0
MMS3_k127_3660512_17 General secretion pathway protein J K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.000000000000000000000000000000000000001324 155.0
MMS3_k127_3660512_18 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000009307 157.0
MMS3_k127_3660512_19 General secretion pathway protein C K02452 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000000000000000000000361 141.0
MMS3_k127_3660512_2 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 600.0
MMS3_k127_3660512_20 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.0000000000000000001845 94.0
MMS3_k127_3660512_21 Type II secretion system (T2SS), protein I - - - 0.000000000000000001162 90.0
MMS3_k127_3660512_22 general secretion pathway protein h K02457 - - 0.000000000000003156 83.0
MMS3_k127_3660512_23 type II secretion system protein N K02463 - - 0.00000000000006378 81.0
MMS3_k127_3660512_24 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000832 76.0
MMS3_k127_3660512_25 - K06950 - - 0.00000001082 59.0
MMS3_k127_3660512_26 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000006086 52.0
MMS3_k127_3660512_3 response regulator receiver K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 574.0
MMS3_k127_3660512_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 469.0
MMS3_k127_3660512_5 General secretion pathway protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 473.0
MMS3_k127_3660512_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5,6.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 442.0
MMS3_k127_3660512_7 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 413.0
MMS3_k127_3660512_8 Histidine kinase K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 396.0
MMS3_k127_3660512_9 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 292.0
MMS3_k127_3670533_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.601e-301 944.0
MMS3_k127_3670533_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.172e-249 788.0
MMS3_k127_3670533_10 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 286.0
MMS3_k127_3670533_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003758 274.0
MMS3_k127_3670533_12 Belongs to the SfsA family K06206 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005975,GO:0006355,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0044238,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001621 269.0
MMS3_k127_3670533_13 protein conserved in bacteria K09928 - - 0.00000000000000000000000000000000000000000000000000000000001532 210.0
MMS3_k127_3670533_14 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000007305 143.0
MMS3_k127_3670533_15 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000001691 133.0
MMS3_k127_3670533_16 Fibronectin type III domain - - - 0.0000000000000000000000002916 112.0
MMS3_k127_3670533_17 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000002871 102.0
MMS3_k127_3670533_18 - - - - 0.000000000009154 69.0
MMS3_k127_3670533_2 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 609.0
MMS3_k127_3670533_20 Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors K12973 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009279,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016409,GO:0016416,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044462,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.251 0.00008193 51.0
MMS3_k127_3670533_21 - - - - 0.0002835 49.0
MMS3_k127_3670533_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 564.0
MMS3_k127_3670533_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006869,GO:0008144,GO:0008150,GO:0008289,GO:0008559,GO:0009987,GO:0010876,GO:0015221,GO:0015238,GO:0015399,GO:0015405,GO:0015437,GO:0015893,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034040,GO:0034204,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042802,GO:0042908,GO:0042910,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901265,GO:1901363,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 544.0
MMS3_k127_3670533_5 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 463.0
MMS3_k127_3670533_6 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K09808 GO:0005575,GO:0005623,GO:0005886,GO:0008104,GO:0008150,GO:0016020,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 418.0
MMS3_k127_3670533_7 Belongs to the agmatine deiminase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009587 389.0
MMS3_k127_3670533_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 349.0
MMS3_k127_3670533_9 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 294.0
MMS3_k127_3805389_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 415.0
MMS3_k127_3805389_1 Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 387.0
MMS3_k127_3805389_2 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 298.0
MMS3_k127_3805389_3 NlpB/DapX lipoprotein K07287 - - 0.00000000000000000000000000000003977 134.0
MMS3_k127_3813945_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1471.0
MMS3_k127_3813945_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 556.0
MMS3_k127_3813945_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 309.0
MMS3_k127_3813945_11 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 309.0
MMS3_k127_3813945_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 300.0
MMS3_k127_3813945_13 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002694 255.0
MMS3_k127_3813945_14 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001372 243.0
MMS3_k127_3813945_15 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008056 246.0
MMS3_k127_3813945_16 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000002856 237.0
MMS3_k127_3813945_17 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000004044 232.0
MMS3_k127_3813945_18 Transcriptional regulator, LysR family - GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000001848 239.0
MMS3_k127_3813945_19 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004375 238.0
MMS3_k127_3813945_2 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 552.0
MMS3_k127_3813945_20 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000004117 230.0
MMS3_k127_3813945_21 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000005028 220.0
MMS3_k127_3813945_22 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000005422 213.0
MMS3_k127_3813945_23 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000000006344 209.0
MMS3_k127_3813945_24 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000000001628 196.0
MMS3_k127_3813945_25 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000000000000000000000000000297 197.0
MMS3_k127_3813945_26 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000002464 194.0
MMS3_k127_3813945_27 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000009131 184.0
MMS3_k127_3813945_28 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000001034 175.0
MMS3_k127_3813945_29 Involved in the binding of tRNA to the ribosomes K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000007281 171.0
MMS3_k127_3813945_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 510.0
MMS3_k127_3813945_30 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000002633 164.0
MMS3_k127_3813945_31 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000002478 179.0
MMS3_k127_3813945_32 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000000004445 160.0
MMS3_k127_3813945_33 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000001202 158.0
MMS3_k127_3813945_34 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000008527 138.0
MMS3_k127_3813945_35 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000137 133.0
MMS3_k127_3813945_36 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000001185 126.0
MMS3_k127_3813945_37 - - - - 0.0000000000000000000000000006599 125.0
MMS3_k127_3813945_38 Ribosomal protein L30p/L7e K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000007733 106.0
MMS3_k127_3813945_39 - - - - 0.0000000000000000001976 95.0
MMS3_k127_3813945_4 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 516.0
MMS3_k127_3813945_40 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000138 82.0
MMS3_k127_3813945_41 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000004675 75.0
MMS3_k127_3813945_42 PAS domain - - - 0.000000002484 59.0
MMS3_k127_3813945_5 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 498.0
MMS3_k127_3813945_6 Belongs to the RimK family K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 498.0
MMS3_k127_3813945_7 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 465.0
MMS3_k127_3813945_8 PFAM Succinylglutamate desuccinylase Aspartoacylase K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 428.0
MMS3_k127_3813945_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 342.0
MMS3_k127_3837529_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 3.998e-297 923.0
MMS3_k127_3837529_1 4Fe-4S dicluster domain - - - 7.101e-274 847.0
MMS3_k127_3837529_10 sulfur relay protein TusB DsrH K07237 - - 0.00000000000000000000000000000000003322 136.0
MMS3_k127_3837529_11 - - - - 0.000000000000000000000000000000007847 133.0
MMS3_k127_3837529_12 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000008788 112.0
MMS3_k127_3837529_13 conserved protein involved in intracellular sulfur reduction K07235 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.000000000001221 67.0
MMS3_k127_3837529_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 606.0
MMS3_k127_3837529_3 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 473.0
MMS3_k127_3837529_4 Histidine kinase K07673 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007987 441.0
MMS3_k127_3837529_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 333.0
MMS3_k127_3837529_6 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 301.0
MMS3_k127_3837529_7 Belongs to the DsrF TusC family K07236 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00000000000000000000000000000000000000000000000000000000000001399 217.0
MMS3_k127_3837529_8 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000000000001506 198.0
MMS3_k127_3837529_9 helix_turn_helix, Lux Regulon K07684 - - 0.000000000000000000000000000000000000000000000002644 177.0
MMS3_k127_3843515_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 9.241e-314 968.0
MMS3_k127_3843515_1 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 2.059e-281 873.0
MMS3_k127_3843515_10 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 364.0
MMS3_k127_3843515_11 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 327.0
MMS3_k127_3843515_12 PFAM Signal transduction response regulator, receiver K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 316.0
MMS3_k127_3843515_13 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 308.0
MMS3_k127_3843515_14 DEAD DEAH box K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000743 279.0
MMS3_k127_3843515_15 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002118 265.0
MMS3_k127_3843515_16 nitrate reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005975 261.0
MMS3_k127_3843515_17 Peptidase C26 - - - 0.00000000000000000000000000000000000000000000000000000000003864 213.0
MMS3_k127_3843515_18 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000702 201.0
MMS3_k127_3843515_19 Hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000008557 184.0
MMS3_k127_3843515_2 Peptidase U32 K08303 - - 3.042e-211 665.0
MMS3_k127_3843515_20 MazG-like family - - - 0.00000000000000000000000000000000000000006054 155.0
MMS3_k127_3843515_21 - - - - 0.00000000000000000000000000000000006478 139.0
MMS3_k127_3843515_22 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000001262 119.0
MMS3_k127_3843515_23 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000000002798 113.0
MMS3_k127_3843515_24 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016151,GO:0016491,GO:0022900,GO:0030288,GO:0030313,GO:0031975,GO:0032991,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0044569,GO:0045333,GO:0046872,GO:0046914,GO:0055114,GO:0071944,GO:1902494 1.12.99.6 0.00000000000000000001036 98.0
MMS3_k127_3843515_25 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.000000000000000002641 88.0
MMS3_k127_3843515_27 peptidase - - - 0.00000001919 59.0
MMS3_k127_3843515_28 COG1977 Molybdopterin converting factor, small subunit K03636 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000223 53.0
MMS3_k127_3843515_3 Cysteine-rich domain K21834 - - 5.36e-206 647.0
MMS3_k127_3843515_4 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 589.0
MMS3_k127_3843515_5 NiFe/NiFeSe hydrogenase small subunit C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 502.0
MMS3_k127_3843515_6 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 458.0
MMS3_k127_3843515_7 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 402.0
MMS3_k127_3843515_8 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 376.0
MMS3_k127_3843515_9 Signal transduction histidine kinase K07637 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 379.0
MMS3_k127_3844412_0 Transport of potassium into the cell K03549 - - 4.704e-286 889.0
MMS3_k127_3844412_1 GntR family transcriptional regulator - - - 8.552e-246 766.0
MMS3_k127_3844412_10 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000000000000000001165 226.0
MMS3_k127_3844412_11 protein-disulfide reductase activity K04084,K06196 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000001033 196.0
MMS3_k127_3844412_12 chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000006906 205.0
MMS3_k127_3844412_13 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002332 186.0
MMS3_k127_3844412_14 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000146 168.0
MMS3_k127_3844412_15 - - - - 0.00000000000000000000000000000000000000001511 173.0
MMS3_k127_3844412_16 DsrC like protein K11179 - - 0.000000000000000000000000000000000000002372 149.0
MMS3_k127_3844412_17 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000000000000021 148.0
MMS3_k127_3844412_18 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000000000000000000008743 133.0
MMS3_k127_3844412_19 DNA-binding transcription factor activity K21903 - - 0.0000000000000000000000000000000008997 134.0
MMS3_k127_3844412_2 Zinc-binding dehydrogenase K13979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 562.0
MMS3_k127_3844412_22 ( 3 oxidation state) methyltransferase K07755 - 2.1.1.137 0.000000000002366 72.0
MMS3_k127_3844412_3 Domain of unknown function (DUF4346) K00577 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 456.0
MMS3_k127_3844412_4 LysR substrate binding domain K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 449.0
MMS3_k127_3844412_5 Domain of unknown function DUF21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 431.0
MMS3_k127_3844412_6 reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 419.0
MMS3_k127_3844412_7 COG0678 Peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 414.0
MMS3_k127_3844412_8 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 396.0
MMS3_k127_3844412_9 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000002649 240.0
MMS3_k127_3847832_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.962e-227 714.0
MMS3_k127_3847832_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 519.0
MMS3_k127_3847832_10 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 299.0
MMS3_k127_3847832_11 chemotaxis, protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003169 269.0
MMS3_k127_3847832_12 redox protein, regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000002743 221.0
MMS3_k127_3847832_13 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000119 207.0
MMS3_k127_3847832_14 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000228 203.0
MMS3_k127_3847832_15 Protein of unknown function (DUF3530) - - - 0.00000000000000000000000000000000000000000000000000000000579 208.0
MMS3_k127_3847832_16 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000000000000003543 194.0
MMS3_k127_3847832_17 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000001345 185.0
MMS3_k127_3847832_18 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000001129 191.0
MMS3_k127_3847832_19 Paraquat-inducible protein A - - - 0.00000000000000000000000000000000000000008597 156.0
MMS3_k127_3847832_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 442.0
MMS3_k127_3847832_21 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000214 143.0
MMS3_k127_3847832_22 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.00000000002206 73.0
MMS3_k127_3847832_23 Short C-terminal domain K08982 - - 0.0000000002409 63.0
MMS3_k127_3847832_3 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 415.0
MMS3_k127_3847832_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 398.0
MMS3_k127_3847832_5 Transcriptional regulator K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 390.0
MMS3_k127_3847832_6 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 372.0
MMS3_k127_3847832_7 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 353.0
MMS3_k127_3847832_8 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019222,GO:0019438,GO:0030551,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0035438,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045013,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045990,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 331.0
MMS3_k127_3847832_9 COG0512 Anthranilate para-aminobenzoate synthases component II K01658,K01664 GO:0000162,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 315.0
MMS3_k127_3856482_0 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0 1077.0
MMS3_k127_3856482_1 Phosphoglucomutase K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 447.0
MMS3_k127_3856482_10 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000002465 131.0
MMS3_k127_3856482_2 arsenite transmembrane transporter activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 337.0
MMS3_k127_3856482_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003713 281.0
MMS3_k127_3856482_4 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009045 250.0
MMS3_k127_3856482_5 PFAM Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000001593 233.0
MMS3_k127_3856482_6 Putative thioesterase (yiiD_Cterm) - - - 0.0000000000000000000000000000000000000000000001528 171.0
MMS3_k127_3856482_7 DinB family - - - 0.0000000000000000000000000000000000000000000002652 173.0
MMS3_k127_3856482_8 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000000004089 155.0
MMS3_k127_3871344_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1127.0
MMS3_k127_3871344_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1064.0
MMS3_k127_3871344_10 Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K13014 GO:0005575,GO:0008150,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0016020,GO:0042221,GO:0050896 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 386.0
MMS3_k127_3871344_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 387.0
MMS3_k127_3871344_12 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 353.0
MMS3_k127_3871344_13 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 349.0
MMS3_k127_3871344_14 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 338.0
MMS3_k127_3871344_15 TIGRFAM type I secretion outer membrane protein, TolC family K12543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 309.0
MMS3_k127_3871344_16 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001311 254.0
MMS3_k127_3871344_17 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000003186 236.0
MMS3_k127_3871344_18 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000000000000000000001908 228.0
MMS3_k127_3871344_19 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000000000000000000000000000000000000000000000000000003087 220.0
MMS3_k127_3871344_2 Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K10011 - 1.1.1.305,2.1.2.13 6.019e-295 917.0
MMS3_k127_3871344_20 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.0000000000000000000000000000000000000000000000000000000002834 212.0
MMS3_k127_3871344_21 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000001561 217.0
MMS3_k127_3871344_22 - - - - 0.0000000000000000000000000000000000000000000000003365 191.0
MMS3_k127_3871344_23 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000001205 160.0
MMS3_k127_3871344_24 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.000000000000000000000000000000000003924 147.0
MMS3_k127_3871344_25 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000001429 137.0
MMS3_k127_3871344_26 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000000005821 127.0
MMS3_k127_3871344_27 Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane K12963 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0010035,GO:0010038,GO:0010039,GO:0010041,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000009024 91.0
MMS3_k127_3871344_28 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.000000000000000009479 93.0
MMS3_k127_3871344_29 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000002108 92.0
MMS3_k127_3871344_3 Putative diguanylate phosphodiesterase - - - 3.135e-288 913.0
MMS3_k127_3871344_30 EamA-like transporter family - - - 0.000131 49.0
MMS3_k127_3871344_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.519e-271 850.0
MMS3_k127_3871344_5 Diguanylate cyclase - - - 4.062e-226 718.0
MMS3_k127_3871344_6 Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K07806 - 2.6.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 496.0
MMS3_k127_3871344_7 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458 479.0
MMS3_k127_3871344_8 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 446.0
MMS3_k127_3871344_9 Glycosyltransferase like family 2 K10012,K20534 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009539 418.0
MMS3_k127_387570_0 protein involved in exopolysaccharide biosynthesis K16692 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 421.0
MMS3_k127_387570_1 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001203 287.0
MMS3_k127_387570_2 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005544 252.0
MMS3_k127_387570_3 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000319 230.0
MMS3_k127_387570_4 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 - 3.1.3.48 0.0000000000000000000000000000000004064 136.0
MMS3_k127_3893254_0 PFAM von Willebrand factor type A - - - 0.0 1233.0
MMS3_k127_3893254_1 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0 1099.0
MMS3_k127_3893254_10 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.11e-202 636.0
MMS3_k127_3893254_11 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 2.394e-201 632.0
MMS3_k127_3893254_12 Dynamin family - - - 2.01e-196 631.0
MMS3_k127_3893254_13 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 606.0
MMS3_k127_3893254_14 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 593.0
MMS3_k127_3893254_15 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 590.0
MMS3_k127_3893254_16 chemotaxis protein K02660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 601.0
MMS3_k127_3893254_17 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 563.0
MMS3_k127_3893254_18 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 549.0
MMS3_k127_3893254_19 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 507.0
MMS3_k127_3893254_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1046.0
MMS3_k127_3893254_20 PFAM AAA domain (dynein-related subfamily) K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 486.0
MMS3_k127_3893254_21 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 509.0
MMS3_k127_3893254_22 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 474.0
MMS3_k127_3893254_23 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 476.0
MMS3_k127_3893254_24 Oxidoreductase FAD-binding domain K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 437.0
MMS3_k127_3893254_25 Belongs to the prokaryotic GSH synthase family K01920 GO:0000287,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 428.0
MMS3_k127_3893254_26 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 403.0
MMS3_k127_3893254_27 Aerotaxis receptor Aer K03776 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 405.0
MMS3_k127_3893254_28 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 382.0
MMS3_k127_3893254_29 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 367.0
MMS3_k127_3893254_3 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 2.672e-308 944.0
MMS3_k127_3893254_30 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 336.0
MMS3_k127_3893254_31 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 323.0
MMS3_k127_3893254_32 Alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 304.0
MMS3_k127_3893254_33 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0003674,GO:0003824,GO:0004735,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002518 276.0
MMS3_k127_3893254_34 PFAM methyltransferase small - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003359 267.0
MMS3_k127_3893254_35 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002291 267.0
MMS3_k127_3893254_36 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000003669 261.0
MMS3_k127_3893254_37 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000382 262.0
MMS3_k127_3893254_38 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000656 234.0
MMS3_k127_3893254_39 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000293 234.0
MMS3_k127_3893254_4 Belongs to the peptidase S16 family - - - 9.766e-281 884.0
MMS3_k127_3893254_40 phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000005626 231.0
MMS3_k127_3893254_41 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000008048 231.0
MMS3_k127_3893254_42 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000001145 229.0
MMS3_k127_3893254_43 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000006303 226.0
MMS3_k127_3893254_44 COG0477 Permeases of the major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000007911 223.0
MMS3_k127_3893254_45 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000007975 227.0
MMS3_k127_3893254_46 response regulator K02657 - - 0.000000000000000000000000000000000000000000000000000000000000002223 220.0
MMS3_k127_3893254_47 Chemotaxis protein CheW K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000417 218.0
MMS3_k127_3893254_48 CheB methylesterase K06597 - - 0.00000000000000000000000000000000000000000000000000000000003241 220.0
MMS3_k127_3893254_49 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000213 203.0
MMS3_k127_3893254_5 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 1.505e-253 801.0
MMS3_k127_3893254_50 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896 3.5.1.44 0.0000000000000000000000000000000000000000000000000000007614 196.0
MMS3_k127_3893254_51 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000003207 190.0
MMS3_k127_3893254_52 tonb protein K03832 - - 0.0000000000000000000000000000000000000000000000000004665 195.0
MMS3_k127_3893254_53 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000007662 193.0
MMS3_k127_3893254_54 Type IV pilus response regulator PilH K02658 - - 0.0000000000000000000000000000000000000000000000004466 177.0
MMS3_k127_3893254_55 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000000000000000000000001165 180.0
MMS3_k127_3893254_56 - - - - 0.00000000000000000000000000000000000000000000543 164.0
MMS3_k127_3893254_57 protein histidine kinase activity K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000002908 186.0
MMS3_k127_3893254_58 AAA domain K03496 - - 0.000000000000000000000000000000000000000003762 163.0
MMS3_k127_3893254_59 Two component signalling adaptor domain K02659 - - 0.000000000000000000000000000000000000000007752 160.0
MMS3_k127_3893254_6 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 6.028e-247 768.0
MMS3_k127_3893254_60 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000009189 156.0
MMS3_k127_3893254_61 integral membrane protein K02221 - - 0.00000000000000000000000000000000005743 141.0
MMS3_k127_3893254_62 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000847 133.0
MMS3_k127_3893254_63 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000001361 135.0
MMS3_k127_3893254_64 - - - - 0.000000000000000000000000011 113.0
MMS3_k127_3893254_65 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000000002525 109.0
MMS3_k127_3893254_66 chemotaxis signal transduction protein K06598 - - 0.0000000000000000000000002609 111.0
MMS3_k127_3893254_68 NusG domain II - - - 0.000000000000000009107 90.0
MMS3_k127_3893254_69 transmembrane signaling receptor activity - - - 0.0001533 51.0
MMS3_k127_3893254_7 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 3.713e-229 715.0
MMS3_k127_3893254_8 Belongs to the pyruvate kinase family K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 2.61e-210 663.0
MMS3_k127_3893254_9 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 1.526e-203 636.0
MMS3_k127_389869_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 2.672e-307 964.0
MMS3_k127_389869_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.041e-285 886.0
MMS3_k127_389869_10 TIGRFAM urea ABC transporter, ATP-binding protein UrtE K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 344.0
MMS3_k127_389869_11 nickel cation binding K03189,K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 339.0
MMS3_k127_389869_12 PFAM conserved K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 314.0
MMS3_k127_389869_13 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001821 253.0
MMS3_k127_389869_14 Peptidase membrane zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000001364 228.0
MMS3_k127_389869_15 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000008163 212.0
MMS3_k127_389869_16 Nitrogen regulatory protein P-II K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000699 196.0
MMS3_k127_389869_17 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000004351 207.0
MMS3_k127_389869_18 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000000000006241 188.0
MMS3_k127_389869_19 MerR, DNA binding K19591 - - 0.00000000000000000000000000000000000000000000000007491 180.0
MMS3_k127_389869_2 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 2.977e-248 783.0
MMS3_k127_389869_20 Sporulation related domain - - - 0.000000000000000000000000000000000000004697 153.0
MMS3_k127_389869_21 Ethanolamine utilisation protein EutQ K06995 - - 0.000000000000000000000000000000000001129 143.0
MMS3_k127_389869_22 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000000000000000000001808 138.0
MMS3_k127_389869_23 Glutaredoxin - - - 0.000000000000000000000000001257 114.0
MMS3_k127_389869_24 PFAM Heavy metal transport detoxification protein K07213 - - 0.00000000000000000004767 91.0
MMS3_k127_389869_25 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.000000000000000000209 87.0
MMS3_k127_389869_26 - - - - 0.00000003856 59.0
MMS3_k127_389869_3 Urea short-chain amide ABC transporter, periplasmic urea short-chain amide-binding protein K11959 - - 3.743e-206 648.0
MMS3_k127_389869_4 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 607.0
MMS3_k127_389869_5 Branched-chain amino acid transport system / permease component K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 610.0
MMS3_k127_389869_6 Branched-chain amino acid transport system / permease component K01998,K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 557.0
MMS3_k127_389869_7 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 545.0
MMS3_k127_389869_8 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 389.0
MMS3_k127_389869_9 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 387.0
MMS3_k127_390085_0 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 9.19e-217 683.0
MMS3_k127_390085_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 533.0
MMS3_k127_390085_10 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000004377 181.0
MMS3_k127_390085_11 Bacterial SH3 domain homologues K07184 - - 0.000000000000000000000000000000000000003476 155.0
MMS3_k127_390085_12 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000000000000000000000000000007635 139.0
MMS3_k127_390085_13 Gram-negative porin - - - 0.0000000000000000000000000000000008031 144.0
MMS3_k127_390085_14 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000001284 136.0
MMS3_k127_390085_15 Sel1-like repeats. K07126 - - 0.0000000000000000000000000002739 122.0
MMS3_k127_390085_16 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.000000000000005082 76.0
MMS3_k127_390085_17 TraB family K09973 - - 0.000000004202 59.0
MMS3_k127_390085_2 PFAM aminotransferase class-III K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 512.0
MMS3_k127_390085_3 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 505.0
MMS3_k127_390085_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009296 439.0
MMS3_k127_390085_5 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 441.0
MMS3_k127_390085_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 334.0
MMS3_k127_390085_7 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 319.0
MMS3_k127_390085_8 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 298.0
MMS3_k127_390085_9 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005095 277.0
MMS3_k127_3905051_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 3.459e-207 649.0
MMS3_k127_3905051_1 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 569.0
MMS3_k127_3905051_10 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000003186 217.0
MMS3_k127_3905051_11 - - - - 0.00000000000000000000000000000000000000004499 160.0
MMS3_k127_3905051_12 PFAM electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000000000000001016 147.0
MMS3_k127_3905051_13 protein conserved in bacteria K09796 - - 0.000000000000000001959 91.0
MMS3_k127_3905051_14 Belongs to the peptidase M48B family K03799 - - 0.00000000000000001161 94.0
MMS3_k127_3905051_15 - - - - 0.000000000001732 76.0
MMS3_k127_3905051_16 Shikimate kinase - - - 0.0000000001328 64.0
MMS3_k127_3905051_2 PFAM EAL domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 559.0
MMS3_k127_3905051_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 424.0
MMS3_k127_3905051_4 lysine 2,3-aminomutase K19810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
MMS3_k127_3905051_5 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 329.0
MMS3_k127_3905051_6 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 320.0
MMS3_k127_3905051_7 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 305.0
MMS3_k127_3905051_8 With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P K04568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016746,GO:0016755,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052868,GO:0071704,GO:0071915,GO:0072580,GO:0072581,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006462 304.0
MMS3_k127_3905051_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001475 273.0
MMS3_k127_3912871_0 AcrB/AcrD/AcrF family - - - 0.0 1456.0
MMS3_k127_3912871_1 Multicopper oxidase - - - 5.218e-243 764.0
MMS3_k127_3912871_10 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 329.0
MMS3_k127_3912871_11 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 296.0
MMS3_k127_3912871_12 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003258 256.0
MMS3_k127_3912871_13 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002075 239.0
MMS3_k127_3912871_14 Phosphatidylethanolamine-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000007606 218.0
MMS3_k127_3912871_15 O-methyltransferase K15256 - - 0.000000000000000000000000000000000000000000000000000000000001504 216.0
MMS3_k127_3912871_16 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000001597 189.0
MMS3_k127_3912871_18 Ketosteroid isomerase-related protein - - - 0.0000000000000000000000000003196 117.0
MMS3_k127_3912871_19 Copper resistance K07233 - - 0.00000000000000000000001661 106.0
MMS3_k127_3912871_2 Major Facilitator Superfamily K08166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 486.0
MMS3_k127_3912871_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 459.0
MMS3_k127_3912871_4 Major facilitator superfamily K19577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 456.0
MMS3_k127_3912871_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 400.0
MMS3_k127_3912871_6 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 363.0
MMS3_k127_3912871_7 alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 361.0
MMS3_k127_3912871_8 Transcriptional regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 358.0
MMS3_k127_3912871_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 329.0
MMS3_k127_4023515_0 Magnesium chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 513.0
MMS3_k127_4023515_1 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002628 262.0
MMS3_k127_4023515_2 Urease, gamma subunit K01430,K14048 - 3.5.1.5 0.0000000000000000000000000000000000000000000000002029 177.0
MMS3_k127_4023515_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000001585 109.0
MMS3_k127_4023515_4 protein conserved in bacteria K09806 - - 0.000000000000118 73.0
MMS3_k127_4033831_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 3.125e-311 976.0
MMS3_k127_4033831_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 432.0
MMS3_k127_4033831_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 397.0
MMS3_k127_4033831_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 389.0
MMS3_k127_4033831_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 323.0
MMS3_k127_4033831_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008225 250.0
MMS3_k127_4033831_6 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000001215 220.0
MMS3_k127_4033831_7 lactoylglutathione lyase activity K08234 - - 0.00000000000000000000000000000000008283 134.0
MMS3_k127_4039924_0 COG0474 Cation transport ATPase - - - 0.0 1035.0
MMS3_k127_4039924_1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 1.358e-281 875.0
MMS3_k127_4039924_11 - - - - 0.000000002291 59.0
MMS3_k127_4039924_12 - - - - 0.00000001175 55.0
MMS3_k127_4039924_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.142e-225 707.0
MMS3_k127_4039924_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 GO:0003674,GO:0003824,GO:0004812,GO:0004818,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006424,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.17 7.606e-220 689.0
MMS3_k127_4039924_4 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 569.0
MMS3_k127_4039924_5 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 431.0
MMS3_k127_4039924_6 cytochrome p450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 407.0
MMS3_k127_4039924_7 belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000008645 256.0
MMS3_k127_4039924_8 Domain of unknown function (DUF374) - - - 0.000000000000000000000000000000000000000000000000000000999 200.0
MMS3_k127_4039924_9 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.00000000000000000000000004898 111.0
MMS3_k127_4053661_0 Phosphoketolase K01621 GO:0003674,GO:0003824,GO:0008150,GO:0009758 4.1.2.22,4.1.2.9 0.0 1251.0
MMS3_k127_4053661_1 phosphorylase K00688 - 2.4.1.1 0.0 1034.0
MMS3_k127_4053661_2 PFAM ABC transporter K01990,K01992,K09695 - - 2.661e-225 711.0
MMS3_k127_4053661_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008617 476.0
MMS3_k127_4053661_4 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 462.0
MMS3_k127_4053661_5 PFAM secretion protein HlyD family protein K01993,K16922 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 293.0
MMS3_k127_4063232_0 Tfp pilus assembly protein tip-associated adhesin PilY1 - - - 1.008e-309 1008.0
MMS3_k127_4063232_1 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 585.0
MMS3_k127_4063232_10 Type IV pilus assembly protein PilX C-term K02673 - - 0.00000000000000000000000689 111.0
MMS3_k127_4063232_11 Polyribonucleotide nucleotidyltransferase - - - 0.0000000000000000000007719 102.0
MMS3_k127_4063232_13 Hydrogenase maturation protease - - - 0.0000000000000000002179 93.0
MMS3_k127_4063232_14 - - - - 0.00000000000000000322 94.0
MMS3_k127_4063232_15 PFAM Forkhead-associated protein - - - 0.0000000000000006732 85.0
MMS3_k127_4063232_16 domain-containing protein K16726 GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 - 0.0000000000001628 81.0
MMS3_k127_4063232_17 Type IV Pilus-assembly protein W K02672 - - 0.0000000000001637 74.0
MMS3_k127_4063232_18 pilus assembly protein PilE K02655 - - 0.00000000009615 69.0
MMS3_k127_4063232_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 530.0
MMS3_k127_4063232_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 473.0
MMS3_k127_4063232_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 384.0
MMS3_k127_4063232_5 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 359.0
MMS3_k127_4063232_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 352.0
MMS3_k127_4063232_7 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002216 261.0
MMS3_k127_4063232_8 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003346 255.0
MMS3_k127_4063232_9 Zinc-ribbon containing domain - - - 0.000000000000000000000000000000000000000001818 164.0
MMS3_k127_4112047_0 GTP-binding protein TypA K06207 - - 7.551e-312 963.0
MMS3_k127_4112047_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 468.0
MMS3_k127_4112047_2 KAP family P-loop domain - - - 0.00000000000000000000000000000000000000000000000003382 192.0
MMS3_k127_4142715_0 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 3.312e-237 737.0
MMS3_k127_4142715_1 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 2.476e-227 705.0
MMS3_k127_4142715_2 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 316.0
MMS3_k127_4142715_3 TIGRFAM CRISPR-associated protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005533 263.0
MMS3_k127_4142715_4 conserved protein involved in intracellular sulfur reduction K07235 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.000000000000000000000000000000000000000000000000000000000000633 212.0
MMS3_k127_4142715_5 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000003675 154.0
MMS3_k127_4142715_6 - - - - 0.0000000000000000004618 88.0
MMS3_k127_4164779_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 570.0
MMS3_k127_4164779_1 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 333.0
MMS3_k127_4164779_10 Belongs to the P(II) protein family - - - 0.0000000000000000000000000000000000000000000000011 176.0
MMS3_k127_4164779_11 belongs to the Fur family K09826 - - 0.000000000000000000000000000000000000000000000004156 176.0
MMS3_k127_4164779_12 NUDIX domain - - - 0.000000000000000000000000000000000000000001116 165.0
MMS3_k127_4164779_13 Thioredoxin - - - 0.0000000000000000000000008289 111.0
MMS3_k127_4164779_14 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.1.10 0.00000000000000000000001577 111.0
MMS3_k127_4164779_15 chlorophyll binding K03640 - - 0.000000000000000000003079 102.0
MMS3_k127_4164779_16 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000003145 91.0
MMS3_k127_4164779_2 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 335.0
MMS3_k127_4164779_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 321.0
MMS3_k127_4164779_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 315.0
MMS3_k127_4164779_5 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002136 286.0
MMS3_k127_4164779_6 COG3023 Negative regulator of beta-lactamase expression K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043170,GO:0044424,GO:0044464,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000001294 248.0
MMS3_k127_4164779_7 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000000000000000000001122 244.0
MMS3_k127_4164779_8 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000001815 223.0
MMS3_k127_4164779_9 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000001729 198.0
MMS3_k127_4185418_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1229.0
MMS3_k127_4185418_1 modulator of DNA gyrase K03568 - - 7.046e-232 726.0
MMS3_k127_4185418_10 PFAM CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 337.0
MMS3_k127_4185418_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000002315 209.0
MMS3_k127_4185418_12 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000002361 209.0
MMS3_k127_4185418_13 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000007959 196.0
MMS3_k127_4185418_14 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0042803,GO:0043021,GO:0043022,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046983,GO:0070037,GO:0070038,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.177 0.00000000000000000000000000000000000000000000000000001307 192.0
MMS3_k127_4185418_15 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000465 139.0
MMS3_k127_4185418_16 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000008954 95.0
MMS3_k127_4185418_2 COG1530 Ribonucleases G and E K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 1.361e-216 681.0
MMS3_k127_4185418_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 606.0
MMS3_k127_4185418_4 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 525.0
MMS3_k127_4185418_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 465.0
MMS3_k127_4185418_6 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 474.0
MMS3_k127_4185418_7 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 404.0
MMS3_k127_4185418_8 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
MMS3_k127_4185418_9 DNA polymerase III delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 343.0
MMS3_k127_4245840_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.708e-204 643.0
MMS3_k127_4245840_1 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 359.0
MMS3_k127_4245840_2 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 357.0
MMS3_k127_4245840_3 Belongs to the UPF0149 family K09895 - - 0.000000000000000000000000000324 122.0
MMS3_k127_4245840_4 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000001819 106.0
MMS3_k127_4245840_5 - - - - 0.0000000001013 64.0
MMS3_k127_4247457_0 RNA polymerase recycling family C-terminal K03580 - - 8.551e-315 991.0
MMS3_k127_4247457_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 3.896e-210 659.0
MMS3_k127_4247457_10 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 430.0
MMS3_k127_4247457_11 PFAM LppC K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 441.0
MMS3_k127_4247457_12 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 424.0
MMS3_k127_4247457_13 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 419.0
MMS3_k127_4247457_14 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 402.0
MMS3_k127_4247457_15 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 402.0
MMS3_k127_4247457_16 PFAM ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 396.0
MMS3_k127_4247457_17 ABC transporter permease K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 392.0
MMS3_k127_4247457_18 Trypsin K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 397.0
MMS3_k127_4247457_19 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 367.0
MMS3_k127_4247457_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 7.206e-201 636.0
MMS3_k127_4247457_20 PFAM ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 355.0
MMS3_k127_4247457_21 Cell wall formation K00075 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0055114,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 357.0
MMS3_k127_4247457_22 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 356.0
MMS3_k127_4247457_23 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 339.0
MMS3_k127_4247457_24 NGG1p interacting factor 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 311.0
MMS3_k127_4247457_25 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 297.0
MMS3_k127_4247457_26 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000005587 255.0
MMS3_k127_4247457_27 lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001261 260.0
MMS3_k127_4247457_28 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000001135 250.0
MMS3_k127_4247457_29 COG0625 Glutathione S-transferase K03599 GO:0001000,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0008150,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0042594,GO:0043175,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070063,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000002656 249.0
MMS3_k127_4247457_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 4.032e-200 631.0
MMS3_k127_4247457_30 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000002067 243.0
MMS3_k127_4247457_31 phosphatase homologous to the C-terminal domain of histone macroH2A1 - GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231 - 0.000000000000000000000000000000000000000000000000000000000000000006408 228.0
MMS3_k127_4247457_32 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000000000000000000002002 207.0
MMS3_k127_4247457_33 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000000002637 195.0
MMS3_k127_4247457_34 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000004275 164.0
MMS3_k127_4247457_35 Chalcone isomerase-like - - - 0.00000000000000000000000000000000000000000524 163.0
MMS3_k127_4247457_36 nitric oxide dioxygenase activity - - - 0.0000000000000000000000000000000000000001059 155.0
MMS3_k127_4247457_37 PFAM Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000007367 154.0
MMS3_k127_4247457_38 Protein required for attachment to host cells - - - 0.0000000000000000000000000000000000000008465 153.0
MMS3_k127_4247457_39 COG0575 CDP-diglyceride synthetase K19664 - 2.7.7.67 0.00000000000000000000000000000000001124 141.0
MMS3_k127_4247457_4 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 563.0
MMS3_k127_4247457_40 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000001688 121.0
MMS3_k127_4247457_41 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.0000000000000000000000000004466 121.0
MMS3_k127_4247457_42 - - - - 0.0000000000000000000008817 95.0
MMS3_k127_4247457_43 Belongs to the BolA IbaG family - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000000005188 94.0
MMS3_k127_4247457_44 - - - - 0.000000000000000000006542 98.0
MMS3_k127_4247457_45 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000007872 89.0
MMS3_k127_4247457_46 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000008118 79.0
MMS3_k127_4247457_47 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000001158 74.0
MMS3_k127_4247457_48 Protein of unknown function DUF72 - - - 0.00000000001208 73.0
MMS3_k127_4247457_49 PFAM Hypoxia induced protein conserved region - - - 0.000002343 51.0
MMS3_k127_4247457_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 534.0
MMS3_k127_4247457_50 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000879 45.0
MMS3_k127_4247457_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 472.0
MMS3_k127_4247457_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 456.0
MMS3_k127_4247457_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 449.0
MMS3_k127_4247457_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 443.0
MMS3_k127_428713_0 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 543.0
MMS3_k127_428713_1 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 319.0
MMS3_k127_428713_2 Bacterial transcriptional activator domain - - - 0.00000214 54.0
MMS3_k127_4340519_0 COG0405 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 608.0
MMS3_k127_4340519_1 PFAM Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 455.0
MMS3_k127_4340519_10 Domain of unknown function (DUF4340) - - - 0.000000000000000000001437 106.0
MMS3_k127_4340519_11 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000005824 94.0
MMS3_k127_4340519_12 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000002476 81.0
MMS3_k127_4340519_13 - - - - 0.00000000000000513 81.0
MMS3_k127_4340519_2 Pirin C-terminal cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 399.0
MMS3_k127_4340519_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 391.0
MMS3_k127_4340519_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 347.0
MMS3_k127_4340519_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 304.0
MMS3_k127_4340519_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000001695 215.0
MMS3_k127_4340519_7 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000000002002 216.0
MMS3_k127_4340519_8 Ferredoxin - - - 0.000000000000000000000000000000000000001799 151.0
MMS3_k127_4340519_9 enzyme involved in biosynthesis of extracellular polysaccharides - - - 0.0000000000000000000000000000421 118.0
MMS3_k127_487612_0 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 416.0
MMS3_k127_487612_1 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004789 259.0
MMS3_k127_487612_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002212 237.0
MMS3_k127_487612_3 - - - - 0.000000000000000000000000000000000000001015 154.0
MMS3_k127_487612_4 Domain of unknown function (DUF4124) - - - 0.0009127 49.0
MMS3_k127_501388_0 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 1.269e-230 719.0
MMS3_k127_501388_1 Fis Family K02584 - - 5.224e-227 713.0
MMS3_k127_501388_10 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000736 218.0
MMS3_k127_501388_11 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000000000000000000000000000000000003185 205.0
MMS3_k127_501388_12 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000533 122.0
MMS3_k127_501388_13 CBS domain - - - 0.000000000000000000278 96.0
MMS3_k127_501388_14 AraC family - - - 0.0000000000000000003577 91.0
MMS3_k127_501388_2 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 2.396e-214 668.0
MMS3_k127_501388_3 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 586.0
MMS3_k127_501388_4 nitrogen fixation negative regulator NifL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 572.0
MMS3_k127_501388_5 Part of a membrane complex involved in electron transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 424.0
MMS3_k127_501388_6 cofactor biosynthesis protein NifB K02585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 357.0
MMS3_k127_501388_7 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 298.0
MMS3_k127_501388_8 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002358 282.0
MMS3_k127_501388_9 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007836 240.0
MMS3_k127_553555_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.729e-225 702.0
MMS3_k127_553555_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 550.0
MMS3_k127_553555_2 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 497.0
MMS3_k127_553555_3 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K13819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 436.0
MMS3_k127_553555_4 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 354.0
MMS3_k127_553555_5 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000005203 244.0
MMS3_k127_553555_6 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000003118 229.0
MMS3_k127_553555_7 PFAM NifZ K02597 - - 0.00000000000000000000000000000000000000000000000000006614 190.0
MMS3_k127_553555_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000105 168.0
MMS3_k127_553555_9 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.00000000000000000000000000000000001236 139.0
MMS3_k127_595114_0 Glucodextranase, domain N K01178 - 3.2.1.3 0.0 1060.0
MMS3_k127_595114_1 TIGRFAM FeS assembly protein SufB K09014 - - 2.121e-260 809.0
MMS3_k127_595114_10 ABC transporter K15738 - - 0.0000000000000000000000000000002093 127.0
MMS3_k127_595114_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 8.661e-227 712.0
MMS3_k127_595114_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 547.0
MMS3_k127_595114_4 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 395.0
MMS3_k127_595114_5 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 355.0
MMS3_k127_595114_6 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 312.0
MMS3_k127_595114_7 PFAM Fe-S metabolism associated K02426 - - 0.000000000000000000000000000000000000000000000001124 177.0
MMS3_k127_595114_8 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 - - 0.0000000000000000000000000000000000000000698 153.0
MMS3_k127_595114_9 FeS assembly SUF system protein - - - 0.000000000000000000000000000000003827 132.0
MMS3_k127_658366_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 501.0
MMS3_k127_658366_1 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 364.0
MMS3_k127_658366_2 PFAM NifQ K15790 - - 0.00000000000000000000000000000000000000000000000000000002377 202.0
MMS3_k127_658366_3 ArsC family - - - 0.0000000000000000000000000000000000000002047 154.0
MMS3_k127_692013_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.65e-237 740.0
MMS3_k127_692013_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.616e-231 724.0
MMS3_k127_692013_10 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 487.0
MMS3_k127_692013_11 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 491.0
MMS3_k127_692013_12 Peptidoglycan polymerase that is essential for cell wall elongation K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 434.0
MMS3_k127_692013_13 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 428.0
MMS3_k127_692013_14 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 404.0
MMS3_k127_692013_15 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 406.0
MMS3_k127_692013_16 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 407.0
MMS3_k127_692013_17 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 400.0
MMS3_k127_692013_18 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) K00059,K18335 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 382.0
MMS3_k127_692013_19 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 381.0
MMS3_k127_692013_2 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 1.584e-215 685.0
MMS3_k127_692013_20 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 369.0
MMS3_k127_692013_21 PFAM Aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 358.0
MMS3_k127_692013_22 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 349.0
MMS3_k127_692013_23 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 339.0
MMS3_k127_692013_24 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 327.0
MMS3_k127_692013_25 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 316.0
MMS3_k127_692013_26 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 312.0
MMS3_k127_692013_27 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 323.0
MMS3_k127_692013_28 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 290.0
MMS3_k127_692013_29 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006464,GO:0006479,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016740,GO:0016741,GO:0018364,GO:0019222,GO:0019538,GO:0022411,GO:0032259,GO:0032984,GO:0034641,GO:0034645,GO:0036009,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 289.0
MMS3_k127_692013_3 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 6.873e-200 626.0
MMS3_k127_692013_30 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 286.0
MMS3_k127_692013_31 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000005467 267.0
MMS3_k127_692013_32 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001787 262.0
MMS3_k127_692013_33 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006839 254.0
MMS3_k127_692013_34 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006762 246.0
MMS3_k127_692013_35 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000001384 243.0
MMS3_k127_692013_36 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000004991 214.0
MMS3_k127_692013_37 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000406 213.0
MMS3_k127_692013_38 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000766 198.0
MMS3_k127_692013_39 DUF218 domain - - - 0.0000000000000000000000000000000000000000000001758 177.0
MMS3_k127_692013_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 562.0
MMS3_k127_692013_40 transcriptional regulator - - - 0.000000000000000000000000000000000000000000004295 166.0
MMS3_k127_692013_41 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000004814 168.0
MMS3_k127_692013_42 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000000000008903 158.0
MMS3_k127_692013_43 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000001973 143.0
MMS3_k127_692013_44 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000001198 129.0
MMS3_k127_692013_45 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000002156 123.0
MMS3_k127_692013_46 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000002351 122.0
MMS3_k127_692013_47 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000629 131.0
MMS3_k127_692013_48 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000001058 102.0
MMS3_k127_692013_49 FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6 - - - 0.00000003929 59.0
MMS3_k127_692013_5 glutamate--cysteine ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006644 551.0
MMS3_k127_692013_50 - - - - 0.00006222 50.0
MMS3_k127_692013_51 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0003245 43.0
MMS3_k127_692013_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 533.0
MMS3_k127_692013_7 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 529.0
MMS3_k127_692013_8 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 514.0
MMS3_k127_692013_9 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 499.0
MMS3_k127_717006_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.508e-306 953.0
MMS3_k127_717006_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.73e-253 800.0
MMS3_k127_717006_10 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 331.0
MMS3_k127_717006_11 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 315.0
MMS3_k127_717006_12 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 323.0
MMS3_k127_717006_13 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 316.0
MMS3_k127_717006_14 stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 295.0
MMS3_k127_717006_15 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008723 273.0
MMS3_k127_717006_16 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000001111 261.0
MMS3_k127_717006_17 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000002863 220.0
MMS3_k127_717006_18 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000001974 213.0
MMS3_k127_717006_19 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000007193 194.0
MMS3_k127_717006_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 499.0
MMS3_k127_717006_20 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000001481 198.0
MMS3_k127_717006_21 Competence protein - - - 0.0000000000000000000000000000000000000000000000003146 184.0
MMS3_k127_717006_22 GGDEF domain K21023 - 2.7.7.65 0.000000000000000000000000000000000000000001134 181.0
MMS3_k127_717006_23 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000006183 152.0
MMS3_k127_717006_24 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000001192 163.0
MMS3_k127_717006_25 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 0.000000000000000000000000000000000003714 143.0
MMS3_k127_717006_26 Cupin - - - 0.00000000000000000000000000000000001131 138.0
MMS3_k127_717006_27 FHA domain - - - 0.0000000000000000000000000244 121.0
MMS3_k127_717006_28 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000002495 105.0
MMS3_k127_717006_29 rho-dependent transcription termination K19000 GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000001592 79.0
MMS3_k127_717006_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 481.0
MMS3_k127_717006_30 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000003901 83.0
MMS3_k127_717006_31 response regulator, receiver K02485,K02490,K03413 - - 0.000000000000009833 81.0
MMS3_k127_717006_32 Cysteine-rich CPXCG - - - 0.00000000000002155 74.0
MMS3_k127_717006_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 478.0
MMS3_k127_717006_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 359.0
MMS3_k127_717006_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 359.0
MMS3_k127_717006_7 TIGRFAM PAS domain S-box - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 386.0
MMS3_k127_717006_8 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 339.0
MMS3_k127_717006_9 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 339.0
MMS3_k127_770467_0 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 9.083e-304 936.0
MMS3_k127_770467_1 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.758e-264 822.0
MMS3_k127_770467_10 Ferredoxin - - - 0.0000000000000000000000000000000000000000000003309 168.0
MMS3_k127_770467_11 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000003155 163.0
MMS3_k127_770467_12 TIGRFAM ferredoxin III - - - 0.0000000000000000000000000000000000000000007893 158.0
MMS3_k127_770467_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000005659 139.0
MMS3_k127_770467_14 PFAM 4Fe-4S ferredoxin, iron-sulphur binding, subgroup - - - 0.0000000000000000000000000000003936 122.0
MMS3_k127_770467_15 - - - - 0.000000000000000000000000000003017 124.0
MMS3_k127_770467_16 - - - - 0.000000000000000000000000001651 117.0
MMS3_k127_770467_17 - - - - 0.000000000000000000000000005808 115.0
MMS3_k127_770467_18 PFAM Uncharacterised protein family UPF0437 - - - 0.00000000000000000000000007414 107.0
MMS3_k127_770467_19 PFAM NifT FixU K02593 - - 0.0000000000000000000000001655 108.0
MMS3_k127_770467_2 Belongs to the NifD NifK NifE NifN family K02592 - - 2.89e-196 621.0
MMS3_k127_770467_20 Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 0.0000000000000000002328 87.0
MMS3_k127_770467_3 PFAM Transposase, IS801 IS1294 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 417.0
MMS3_k127_770467_4 Putative heavy-metal chelation K09138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 326.0
MMS3_k127_770467_5 Dinitrogenase iron-molybdenum cofactor, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 288.0
MMS3_k127_770467_6 Leucine rich repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 286.0
MMS3_k127_770467_7 Protein of unknown function, DUF269 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002215 241.0
MMS3_k127_770467_8 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000009084 196.0
MMS3_k127_770467_9 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.000000000000000000000000000000000000000000000000000004852 194.0
MMS3_k127_801598_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 4.692e-246 789.0
MMS3_k127_801598_1 response regulator receiver K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 589.0
MMS3_k127_801598_10 PFAM Hydrogenase-1 expression HyaE K03619 - - 0.000000000000000000000003781 108.0
MMS3_k127_801598_11 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000001168 97.0
MMS3_k127_801598_12 Pfam:DUF3457 - - - 0.00000000000000000001949 98.0
MMS3_k127_801598_13 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.0000000000000000002253 91.0
MMS3_k127_801598_14 Belongs to the rubredoxin family - - - 0.000000000000000003681 85.0
MMS3_k127_801598_2 Belongs to the HypD family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 515.0
MMS3_k127_801598_3 PFAM ATP-binding region K19661 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000858 492.0
MMS3_k127_801598_4 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 475.0
MMS3_k127_801598_5 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K04652 GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0010467,GO:0016151,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 374.0
MMS3_k127_801598_6 hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003456 263.0
MMS3_k127_801598_7 PFAM HupH hydrogenase expression protein, C-terminal conserved region K03618 - - 0.00000000000000000000000000000000000000000000000000000001322 207.0
MMS3_k127_801598_8 Nickel-dependent hydrogenase - - - 0.00000000000000000000000000000000000000000232 170.0
MMS3_k127_801598_9 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000001205 151.0
MMS3_k127_805795_0 Pfam SNARE associated Golgi protein - - - 8.167e-194 620.0
MMS3_k127_805795_1 SMART Phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 537.0
MMS3_k127_805795_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008491 241.0
MMS3_k127_805795_3 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000006817 188.0
MMS3_k127_805795_4 Major facilitator Superfamily K06902 - - 0.000000000000000000000000000000000001523 149.0
MMS3_k127_805795_5 shikimate kinase activity K00891 - 2.7.1.71 0.000000000000000000000000000119 123.0
MMS3_k127_805795_6 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000003143 93.0
MMS3_k127_805795_7 (GNAT) family - - - 0.00002135 48.0
MMS3_k127_824996_0 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.0 1254.0
MMS3_k127_824996_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1109.0
MMS3_k127_824996_10 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009614 304.0
MMS3_k127_824996_11 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000008361 223.0
MMS3_k127_824996_12 Belongs to the enoyl-CoA hydratase isomerase family K13816 - - 0.0000000000000000000000000000000000000000000000000000009811 201.0
MMS3_k127_824996_13 - - - - 0.000000000000000000000000000000000000000000000000005494 191.0
MMS3_k127_824996_14 Nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.000000000000000000000000000000000000000000000009246 173.0
MMS3_k127_824996_15 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000000000002602 177.0
MMS3_k127_824996_16 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000001297 134.0
MMS3_k127_824996_17 Unextendable partial coding region - - - 0.000000000001281 69.0
MMS3_k127_824996_18 translation initiation factor activity K06996 - - 0.000000000003896 71.0
MMS3_k127_824996_19 - - - - 0.00000000001761 66.0
MMS3_k127_824996_2 Asparagine synthase K01953 - 6.3.5.4 1.217e-287 900.0
MMS3_k127_824996_20 GPR1 FUN34 yaaH family protein K07034 GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006835,GO:0006846,GO:0006855,GO:0008028,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015077,GO:0015078,GO:0015123,GO:0015238,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015355,GO:0015360,GO:0015672,GO:0015711,GO:0015718,GO:0015740,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034220,GO:0035433,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0043893,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1902600,GO:1903825,GO:1905039 - 0.0000000003209 68.0
MMS3_k127_824996_21 - - - - 0.0000000007095 70.0
MMS3_k127_824996_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 1.445e-230 724.0
MMS3_k127_824996_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 523.0
MMS3_k127_824996_5 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 447.0
MMS3_k127_824996_6 transporter, permease K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 421.0
MMS3_k127_824996_7 Histidine kinase K10715 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 379.0
MMS3_k127_824996_8 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814,K13815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 353.0
MMS3_k127_824996_9 Ferritin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 346.0
MMS3_k127_82934_0 PFAM TrkA-N domain K03499 - - 6.631e-220 690.0
MMS3_k127_82934_1 signal transduction histidine kinase - - - 1.517e-199 642.0
MMS3_k127_82934_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 9.446e-194 615.0
MMS3_k127_82934_3 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 582.0
MMS3_k127_82934_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031224,GO:0031226,GO:0031420,GO:0034220,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046983,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 456.0
MMS3_k127_837219_0 FAD linked - - - 0.0 1731.0
MMS3_k127_837219_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 2.527e-229 719.0
MMS3_k127_837219_10 Ferredoxin - - - 0.00000000000000000000000000000000000000000008497 161.0
MMS3_k127_837219_11 Protein of unknown function (DUF2905) - - - 0.000000000000000000000001087 104.0
MMS3_k127_837219_12 COG3203 Outer membrane protein (porin) - - - 0.0000000000000005548 90.0
MMS3_k127_837219_13 Cupin superfamily protein - - - 0.0000000000001231 82.0
MMS3_k127_837219_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 406.0
MMS3_k127_837219_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 351.0
MMS3_k127_837219_4 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002001 274.0
MMS3_k127_837219_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000003044 239.0
MMS3_k127_837219_6 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
MMS3_k127_837219_7 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000009865 194.0
MMS3_k127_837219_8 Serine aminopeptidase, S33 K07018 - - 0.0000000000000000000000000000000000000000000000000006446 192.0
MMS3_k127_837219_9 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000006704 170.0
MMS3_k127_8574_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1429.0
MMS3_k127_8574_1 ABC transporter - - - 9.653e-315 968.0
MMS3_k127_8574_10 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000002497 131.0
MMS3_k127_8574_11 - - - - 0.00000000000000000000000001355 113.0
MMS3_k127_8574_2 Belongs to the 5'-nucleotidase family K17224 - - 2.929e-279 872.0
MMS3_k127_8574_3 Belongs to the glutamate synthase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 528.0
MMS3_k127_8574_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 448.0
MMS3_k127_8574_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 449.0
MMS3_k127_8574_6 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 442.0
MMS3_k127_8574_7 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 383.0
MMS3_k127_8574_8 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003521 289.0
MMS3_k127_8574_9 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000007073 206.0
MMS3_k127_897360_0 Heat shock 70 kDa protein K04043 - - 0.0 1037.0
MMS3_k127_897360_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 9.401e-279 887.0
MMS3_k127_897360_10 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 483.0
MMS3_k127_897360_11 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 472.0
MMS3_k127_897360_12 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 485.0
MMS3_k127_897360_13 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 467.0
MMS3_k127_897360_14 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 465.0
MMS3_k127_897360_15 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 468.0
MMS3_k127_897360_16 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 448.0
MMS3_k127_897360_17 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 454.0
MMS3_k127_897360_18 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 407.0
MMS3_k127_897360_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 405.0
MMS3_k127_897360_2 Signal transduction histidine kinase K03407 - 2.7.13.3 2.724e-220 702.0
MMS3_k127_897360_20 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 397.0
MMS3_k127_897360_21 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 398.0
MMS3_k127_897360_22 TIGRFAM Flagellar basal-body rod K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 373.0
MMS3_k127_897360_23 iron assimilation K07223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 375.0
MMS3_k127_897360_24 Two component signalling adaptor domain K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 353.0
MMS3_k127_897360_25 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 337.0
MMS3_k127_897360_26 TIGRFAM Flagellar hook-associated protein 3 K02397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 342.0
MMS3_k127_897360_27 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 325.0
MMS3_k127_897360_28 His Kinase A (phosphoacceptor) domain K10942 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 323.0
MMS3_k127_897360_29 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 310.0
MMS3_k127_897360_3 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 6.753e-217 681.0
MMS3_k127_897360_30 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 297.0
MMS3_k127_897360_31 PFAM Cobyrinic acid a,c-diamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004033 269.0
MMS3_k127_897360_32 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000001711 262.0
MMS3_k127_897360_33 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002921 257.0
MMS3_k127_897360_34 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004124 258.0
MMS3_k127_897360_35 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001124 242.0
MMS3_k127_897360_36 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000004532 239.0
MMS3_k127_897360_37 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000001983 231.0
MMS3_k127_897360_38 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000006779 213.0
MMS3_k127_897360_39 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000001102 208.0
MMS3_k127_897360_4 COG1157 Flagellar biosynthesis type III secretory pathway ATPase K02412 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 602.0
MMS3_k127_897360_40 PFAM Metal-dependent hydrolase HDOD - - - 0.000000000000000000000000000000000000000000000000000000002655 215.0
MMS3_k127_897360_41 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000009375 199.0
MMS3_k127_897360_42 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000000001235 183.0
MMS3_k127_897360_43 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000001757 185.0
MMS3_k127_897360_44 PFAM Flagellar assembly protein FliH K02411 - - 0.0000000000000000000000000000000000000000000000002136 184.0
MMS3_k127_897360_45 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000007454 169.0
MMS3_k127_897360_46 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000009123 168.0
MMS3_k127_897360_47 Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000001158 163.0
MMS3_k127_897360_48 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000000004025 164.0
MMS3_k127_897360_49 flagellar protein FliS K02422 - - 0.00000000000000000000000000000000000004554 147.0
MMS3_k127_897360_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 575.0
MMS3_k127_897360_50 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000007505 125.0
MMS3_k127_897360_51 pilus modification protein PilV K02671 - - 0.00000000000000000000000000006326 122.0
MMS3_k127_897360_52 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000271 121.0
MMS3_k127_897360_53 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000002247 113.0
MMS3_k127_897360_54 Flagellar hook-length control protein FliK K02414 - - 0.0000000000000000000000008341 119.0
MMS3_k127_897360_55 Type II transport protein GspH K08084 - - 0.000000000000000000000004652 110.0
MMS3_k127_897360_56 Carbamoyl-phosphate synthetase glutamine chain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000001017 97.0
MMS3_k127_897360_57 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000005627 96.0
MMS3_k127_897360_58 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000000816 97.0
MMS3_k127_897360_59 Flagellar regulator YcgR K21087 GO:0000166,GO:0001539,GO:0003674,GO:0005488,GO:0006928,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0035438,GO:0036094,GO:0040011,GO:0040012,GO:0043167,GO:0043168,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051674,GO:0065007,GO:0071945,GO:0071973,GO:0097159,GO:0097367,GO:0097588,GO:1901265,GO:1901363,GO:1902021,GO:2000145 - 0.00000000000002156 83.0
MMS3_k127_897360_6 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 554.0
MMS3_k127_897360_60 Cell division protein DamX K03112 GO:0003674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0030428,GO:0032153,GO:0042834,GO:0044464,GO:0097367 - 0.00000000000005258 80.0
MMS3_k127_897360_61 - - - - 0.0000000000001373 76.0
MMS3_k127_897360_62 protein conserved in bacteria K09920 - - 0.0000000000007641 74.0
MMS3_k127_897360_64 FlaG protein K06603 - - 0.0000000000858 68.0
MMS3_k127_897360_65 Flagellar export protein FliJ K02413 - - 0.0000000001135 68.0
MMS3_k127_897360_67 - - - - 0.00000008557 61.0
MMS3_k127_897360_68 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000009327 55.0
MMS3_k127_897360_69 Flagellar biosynthesis type III secretory pathway chaperone K02399 - - 0.000009408 54.0
MMS3_k127_897360_7 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 520.0
MMS3_k127_897360_70 STAS domain - - - 0.00001681 50.0
MMS3_k127_897360_72 Flagellar protein K02398 - - 0.00006319 49.0
MMS3_k127_897360_8 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 515.0
MMS3_k127_897360_9 Sigma-54 interaction domain K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 507.0
MMS3_k127_911403_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 - 3.6.3.6 0.0 1332.0
MMS3_k127_911403_1 Ferrous iron transport protein B K04759 - - 2.102e-238 752.0
MMS3_k127_911403_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000741 208.0
MMS3_k127_911403_11 Protein conserved in bacteria - - - 0.000000000000000000000000000000000004978 138.0
MMS3_k127_911403_12 - - - - 0.0000000000000000000000000000000006802 138.0
MMS3_k127_911403_13 SPW repeat - - - 0.0000000000000000000000118 105.0
MMS3_k127_911403_15 FeoA K04758 - - 0.000000000002147 69.0
MMS3_k127_911403_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 597.0
MMS3_k127_911403_3 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 481.0
MMS3_k127_911403_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 447.0
MMS3_k127_911403_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 419.0
MMS3_k127_911403_6 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 383.0
MMS3_k127_911403_7 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002615 267.0
MMS3_k127_911403_8 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000001326 217.0
MMS3_k127_911403_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000005872 215.0
MMS3_k127_915500_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 566.0
MMS3_k127_915500_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001014 258.0
MMS3_k127_915500_2 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.00000000000000000000000000000000000000000000009285 172.0
MMS3_k127_915500_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000001077 155.0
MMS3_k127_915500_4 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000003436 123.0
MMS3_k127_915500_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain - - - 0.0000000000000000000000001692 109.0
MMS3_k127_915500_6 RNA recognition motif - - - 0.00000000000000000000003144 102.0
MMS3_k127_979082_0 metallopeptidase activity K01113,K09607 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 504.0
MMS3_k127_979082_1 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 473.0
MMS3_k127_979082_2 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 450.0
MMS3_k127_979082_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642,K18143 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 374.0
MMS3_k127_979082_4 regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport K07664,K18144 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001023,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 285.0
MMS3_k127_979082_5 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000001512 172.0
MMS3_k127_979082_6 - - - - 0.000000000000000000000000000000001022 138.0
MMS3_k127_979082_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000001219 100.0