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Overview

ID MAG02843
Name MMS3_bin.93
Sample SMP0066
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order DSM-5130
Family Acidihalobacteraceae
Genus Acidihalobacter
Species
Assembly information
Completeness (%) 95.54
Contamination (%) 0.64
GC content (%) 52.0
N50 (bp) 65,793
Genome size (bp) 2,331,882

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2063

Gene name Description KEGG GOs EC E-value Score Sequence
MMS3_k127_1038576_0 TonB-dependent Receptor Plug K02014 - - 1.827e-197 639.0
MMS3_k127_1038576_1 Zinc-binding dehydrogenase K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 558.0
MMS3_k127_1038576_10 Gaf domain - - - 0.00000000000000000000000000000000000004737 155.0
MMS3_k127_1038576_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000285 105.0
MMS3_k127_1038576_12 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000007135 108.0
MMS3_k127_1038576_13 TonB C terminal K03832 - - 0.0000000000000000000001266 107.0
MMS3_k127_1038576_14 Probable transposase - - - 0.00000000000000004178 80.0
MMS3_k127_1038576_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.0000000000000000515 82.0
MMS3_k127_1038576_16 Transposase K07497 - - 0.0000000000007309 70.0
MMS3_k127_1038576_17 CVNH domain - - - 0.0000000001709 68.0
MMS3_k127_1038576_18 PFAM Integrase catalytic region K07497 - - 0.00000008045 56.0
MMS3_k127_1038576_2 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 488.0
MMS3_k127_1038576_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 388.0
MMS3_k127_1038576_4 Cytochrome oxidase complex assembly protein 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002467 239.0
MMS3_k127_1038576_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000004855 231.0
MMS3_k127_1038576_6 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000001916 216.0
MMS3_k127_1038576_7 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000001179 216.0
MMS3_k127_1038576_8 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000001743 196.0
MMS3_k127_1038576_9 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000002479 150.0
MMS3_k127_1100432_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1839.0
MMS3_k127_1100432_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1634.0
MMS3_k127_1100432_10 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 2.445e-241 763.0
MMS3_k127_1100432_100 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000787 232.0
MMS3_k127_1100432_101 Peptidase M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000003976 234.0
MMS3_k127_1100432_102 TIGRFAM Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000002419 220.0
MMS3_k127_1100432_103 Belongs to the short-chain dehydrogenases reductases (SDR) family K14189 - - 0.000000000000000000000000000000000000000000000000000000000000002428 227.0
MMS3_k127_1100432_104 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000004966 222.0
MMS3_k127_1100432_105 OmpW family - - - 0.0000000000000000000000000000000000000000000000000000000000002322 217.0
MMS3_k127_1100432_106 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000008064 214.0
MMS3_k127_1100432_107 Iron--sulfur cluster insertion protein erpA K15724 - - 0.00000000000000000000000000000000000000000000000000000000124 202.0
MMS3_k127_1100432_108 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000006346 203.0
MMS3_k127_1100432_109 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000001382 204.0
MMS3_k127_1100432_11 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 6.124e-240 749.0
MMS3_k127_1100432_110 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000001931 198.0
MMS3_k127_1100432_111 PFAM Isochorismatase - - - 0.000000000000000000000000000000000000000000000000000001273 197.0
MMS3_k127_1100432_112 transferase activity, transferring glycosyl groups K02844 - - 0.000000000000000000000000000000000000000000000000000002125 204.0
MMS3_k127_1100432_113 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000485 198.0
MMS3_k127_1100432_114 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000006091 193.0
MMS3_k127_1100432_115 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000001556 199.0
MMS3_k127_1100432_116 transferase activity, transferring glycosyl groups K02844 - - 0.0000000000000000000000000000000000000000000000000002377 198.0
MMS3_k127_1100432_117 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000002684 188.0
MMS3_k127_1100432_118 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000003415 198.0
MMS3_k127_1100432_119 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000195 186.0
MMS3_k127_1100432_12 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 8.49e-236 736.0
MMS3_k127_1100432_120 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000003464 190.0
MMS3_k127_1100432_121 Membrane protein required for beta-lactamase induction K03807 - - 0.00000000000000000000000000000000000000000000000001389 191.0
MMS3_k127_1100432_122 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.00000000000000000000000000000000000000000000000003261 183.0
MMS3_k127_1100432_123 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000000000003632 179.0
MMS3_k127_1100432_124 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000006831 177.0
MMS3_k127_1100432_125 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000284 180.0
MMS3_k127_1100432_126 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000001699 177.0
MMS3_k127_1100432_127 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000000000000002632 181.0
MMS3_k127_1100432_128 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000002117 166.0
MMS3_k127_1100432_129 - K09004 - - 0.0000000000000000000000000000000000000000002616 163.0
MMS3_k127_1100432_13 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.985e-229 720.0
MMS3_k127_1100432_130 - - - - 0.000000000000000000000000000000000000000001815 159.0
MMS3_k127_1100432_132 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000004263 152.0
MMS3_k127_1100432_133 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000006678 151.0
MMS3_k127_1100432_134 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000325 151.0
MMS3_k127_1100432_135 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000003857 150.0
MMS3_k127_1100432_136 chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.00000000000000000000000000000000000001837 150.0
MMS3_k127_1100432_137 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000008012 142.0
MMS3_k127_1100432_138 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000000000007547 148.0
MMS3_k127_1100432_139 Uncharacterized protein conserved in bacteria (DUF2322) - - - 0.000000000000000000000000000000001381 134.0
MMS3_k127_1100432_14 Protein tyrosine kinase - - - 2.963e-229 734.0
MMS3_k127_1100432_140 Putative transposase DNA-binding domain K07496 - - 0.000000000000000000000000000000004873 132.0
MMS3_k127_1100432_141 cold-shock protein K03704 - - 0.00000000000000000000000000000005591 124.0
MMS3_k127_1100432_142 AntiSigma factor - - - 0.000000000000000000000000000000275 132.0
MMS3_k127_1100432_143 Involved in resistance toward heavy metals K03926 GO:0003674,GO:0005488,GO:0005507,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0022607,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0051259,GO:0051260,GO:0065003,GO:0071840 - 0.00000000000000000000000000001861 123.0
MMS3_k127_1100432_144 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000008007 121.0
MMS3_k127_1100432_145 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 GO:0003674,GO:0003824,GO:0004150,GO:0005488,GO:0005515,GO:0016829,GO:0016830,GO:0016832,GO:0042802 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000002226 120.0
MMS3_k127_1100432_146 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.000000000000000000000000002664 118.0
MMS3_k127_1100432_147 - - - - 0.0000000000000000000000002222 115.0
MMS3_k127_1100432_148 MerR HTH family regulatory protein K18997 - - 0.000000000000000000000001104 106.0
MMS3_k127_1100432_149 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000007941 101.0
MMS3_k127_1100432_15 4-Hydroxyphenylpyruvate dioxygenase - - - 2.619e-211 661.0
MMS3_k127_1100432_150 Zinc-finger domain - - - 0.00000000000000000000003259 101.0
MMS3_k127_1100432_151 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000007288 105.0
MMS3_k127_1100432_152 - - - - 0.00000000000000000001519 104.0
MMS3_k127_1100432_154 - - - - 0.00000000000000000003108 90.0
MMS3_k127_1100432_155 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.000000000000000000232 91.0
MMS3_k127_1100432_156 Carbohydrate-selective porin, OprB family K07267 - - 0.000000000000000001973 97.0
MMS3_k127_1100432_157 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02849 - - 0.000000000000000002001 97.0
MMS3_k127_1100432_158 - - - - 0.0000000000000006797 89.0
MMS3_k127_1100432_16 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 2.489e-203 641.0
MMS3_k127_1100432_160 TM2 domain - - - 0.0000000004285 65.0
MMS3_k127_1100432_161 DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.000000006356 57.0
MMS3_k127_1100432_162 PFAM Resolvase, N-terminal - - - 0.00001005 49.0
MMS3_k127_1100432_163 acetyltransferase, isoleucine patch superfamily - - - 0.0002152 45.0
MMS3_k127_1100432_164 SpoVT / AbrB like domain - - - 0.0006697 45.0
MMS3_k127_1100432_17 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 1.983e-195 633.0
MMS3_k127_1100432_18 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 613.0
MMS3_k127_1100432_19 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 605.0
MMS3_k127_1100432_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1119.0
MMS3_k127_1100432_20 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 586.0
MMS3_k127_1100432_21 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 584.0
MMS3_k127_1100432_22 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 565.0
MMS3_k127_1100432_23 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 559.0
MMS3_k127_1100432_24 PFAM Type II secretion system protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 543.0
MMS3_k127_1100432_25 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 544.0
MMS3_k127_1100432_26 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 531.0
MMS3_k127_1100432_27 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 518.0
MMS3_k127_1100432_28 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 513.0
MMS3_k127_1100432_29 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 513.0
MMS3_k127_1100432_3 AcrB/AcrD/AcrF family - - - 0.0 1071.0
MMS3_k127_1100432_30 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 507.0
MMS3_k127_1100432_31 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 501.0
MMS3_k127_1100432_32 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 505.0
MMS3_k127_1100432_33 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 493.0
MMS3_k127_1100432_34 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 480.0
MMS3_k127_1100432_35 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 480.0
MMS3_k127_1100432_36 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009375 473.0
MMS3_k127_1100432_37 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 464.0
MMS3_k127_1100432_38 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 460.0
MMS3_k127_1100432_39 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 449.0
MMS3_k127_1100432_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1061.0
MMS3_k127_1100432_40 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 440.0
MMS3_k127_1100432_41 heat shock protein DnaJ K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 443.0
MMS3_k127_1100432_42 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184,K21308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 439.0
MMS3_k127_1100432_43 Sugar (and other) transporter K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 451.0
MMS3_k127_1100432_44 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 447.0
MMS3_k127_1100432_45 Ion channel K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 441.0
MMS3_k127_1100432_46 chloride channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 443.0
MMS3_k127_1100432_47 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 423.0
MMS3_k127_1100432_48 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488,K21053 - 3.5.4.2,3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 419.0
MMS3_k127_1100432_49 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 420.0
MMS3_k127_1100432_5 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 8.88e-316 994.0
MMS3_k127_1100432_50 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 420.0
MMS3_k127_1100432_51 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 414.0
MMS3_k127_1100432_52 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 413.0
MMS3_k127_1100432_53 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 409.0
MMS3_k127_1100432_54 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 399.0
MMS3_k127_1100432_55 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 384.0
MMS3_k127_1100432_56 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 389.0
MMS3_k127_1100432_57 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 379.0
MMS3_k127_1100432_58 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 370.0
MMS3_k127_1100432_59 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 370.0
MMS3_k127_1100432_6 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.803e-299 923.0
MMS3_k127_1100432_60 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 367.0
MMS3_k127_1100432_61 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 360.0
MMS3_k127_1100432_62 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 357.0
MMS3_k127_1100432_63 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 358.0
MMS3_k127_1100432_64 Glycosyltransferase family 9 (heptosyltransferase) K02841 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 348.0
MMS3_k127_1100432_65 Acid phosphatase homologues K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 360.0
MMS3_k127_1100432_66 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 343.0
MMS3_k127_1100432_67 PFAM DMSO reductase anchor subunit (DmsC) K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 339.0
MMS3_k127_1100432_68 Inositol monophosphatase K05602 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 335.0
MMS3_k127_1100432_69 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 333.0
MMS3_k127_1100432_7 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 2.009e-284 891.0
MMS3_k127_1100432_70 family 9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 327.0
MMS3_k127_1100432_71 COG1108 ABC-type Mn2 Zn2 transport systems permease components K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 323.0
MMS3_k127_1100432_72 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 320.0
MMS3_k127_1100432_73 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007734 319.0
MMS3_k127_1100432_74 PFAM Glycosyl transferase, family 2 K00721,K00786 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 342.0
MMS3_k127_1100432_75 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 308.0
MMS3_k127_1100432_76 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 312.0
MMS3_k127_1100432_77 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 304.0
MMS3_k127_1100432_78 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 297.0
MMS3_k127_1100432_79 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 296.0
MMS3_k127_1100432_8 Protein of unknown function, DUF255 K06888 - - 4.785e-265 834.0
MMS3_k127_1100432_80 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 298.0
MMS3_k127_1100432_81 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 290.0
MMS3_k127_1100432_82 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 292.0
MMS3_k127_1100432_83 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 289.0
MMS3_k127_1100432_84 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 298.0
MMS3_k127_1100432_85 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 289.0
MMS3_k127_1100432_86 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 287.0
MMS3_k127_1100432_87 Glycosyl transferase family 2 K12984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000937 286.0
MMS3_k127_1100432_88 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001386 292.0
MMS3_k127_1100432_89 Surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008513 289.0
MMS3_k127_1100432_9 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.737e-252 781.0
MMS3_k127_1100432_90 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000003985 265.0
MMS3_k127_1100432_91 SMART Diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006926 284.0
MMS3_k127_1100432_92 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002912 261.0
MMS3_k127_1100432_93 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000002046 258.0
MMS3_k127_1100432_94 reductase K03793,K13938 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0055114,GO:0071172 1.5.1.3,1.5.1.33,1.5.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000002046 258.0
MMS3_k127_1100432_95 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007117 261.0
MMS3_k127_1100432_96 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009845 252.0
MMS3_k127_1100432_97 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001441 252.0
MMS3_k127_1100432_98 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000001204 248.0
MMS3_k127_1100432_99 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000001621 244.0
MMS3_k127_1118499_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1430.0
MMS3_k127_1118499_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 8.232e-286 887.0
MMS3_k127_1118499_10 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 543.0
MMS3_k127_1118499_11 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 541.0
MMS3_k127_1118499_12 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 518.0
MMS3_k127_1118499_13 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 488.0
MMS3_k127_1118499_14 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 479.0
MMS3_k127_1118499_15 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 434.0
MMS3_k127_1118499_16 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 425.0
MMS3_k127_1118499_17 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 419.0
MMS3_k127_1118499_18 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 415.0
MMS3_k127_1118499_19 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 389.0
MMS3_k127_1118499_2 5'-nucleotidase, C-terminal domain K17224 - - 3.909e-272 848.0
MMS3_k127_1118499_20 PLD-like domain K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 370.0
MMS3_k127_1118499_21 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 347.0
MMS3_k127_1118499_22 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 346.0
MMS3_k127_1118499_23 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 346.0
MMS3_k127_1118499_24 Binding-protein-dependent transport system inner membrane component K15496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 335.0
MMS3_k127_1118499_25 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 328.0
MMS3_k127_1118499_26 Bacterial extracellular solute-binding protein K15495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009185 332.0
MMS3_k127_1118499_27 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 318.0
MMS3_k127_1118499_28 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 320.0
MMS3_k127_1118499_29 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 301.0
MMS3_k127_1118499_3 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 7.611e-254 794.0
MMS3_k127_1118499_30 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 298.0
MMS3_k127_1118499_31 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 302.0
MMS3_k127_1118499_32 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 297.0
MMS3_k127_1118499_33 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 286.0
MMS3_k127_1118499_34 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001215 292.0
MMS3_k127_1118499_35 AAA domain, putative AbiEii toxin, Type IV TA system K15497 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000505 279.0
MMS3_k127_1118499_36 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000006023 257.0
MMS3_k127_1118499_37 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000006091 253.0
MMS3_k127_1118499_38 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002332 238.0
MMS3_k127_1118499_39 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000005425 216.0
MMS3_k127_1118499_4 Belongs to the argininosuccinate synthase family. Type K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 1e-229 715.0
MMS3_k127_1118499_40 transposase, IS891 IS1136 IS1341 family K07496 - - 0.0000000000000000000000000000000000000000000000000000000000007194 216.0
MMS3_k127_1118499_41 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000118 205.0
MMS3_k127_1118499_42 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000345 202.0
MMS3_k127_1118499_43 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000004559 201.0
MMS3_k127_1118499_44 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000000003313 185.0
MMS3_k127_1118499_45 protein affecting Mg2 Co2 transport K06195 - - 0.0000000000000000000000000000000000000000000000002757 178.0
MMS3_k127_1118499_46 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000003204 178.0
MMS3_k127_1118499_47 Transcriptional regulator K02019 - - 0.0000000000000000000000000000000000002065 143.0
MMS3_k127_1118499_48 Thioredoxin-like domain K03805 - - 0.000000000000000000000000000000007066 135.0
MMS3_k127_1118499_49 - - - - 0.000000000000000000000008355 102.0
MMS3_k127_1118499_5 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 616.0
MMS3_k127_1118499_50 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000003238 101.0
MMS3_k127_1118499_51 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.0000000000000000000005181 98.0
MMS3_k127_1118499_52 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000003318 89.0
MMS3_k127_1118499_53 PFAM DoxX K15977 - - 0.0000002875 54.0
MMS3_k127_1118499_6 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 599.0
MMS3_k127_1118499_7 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 593.0
MMS3_k127_1118499_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 576.0
MMS3_k127_1118499_9 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 557.0
MMS3_k127_1310152_0 pyridine nucleotide-disulphide oxidoreductase - - - 1.66e-240 747.0
MMS3_k127_1310152_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 537.0
MMS3_k127_1310152_10 alpha-(1->3)-fucosyltransferase activity K00753,K01509,K09669,K14412 GO:0000139,GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0005996,GO:0006004,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0008417,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010493,GO:0012505,GO:0016020,GO:0016051,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0018392,GO:0019317,GO:0019318,GO:0019320,GO:0019538,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0033692,GO:0034637,GO:0034645,GO:0036065,GO:0036211,GO:0042354,GO:0042355,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046920,GO:0070085,GO:0071704,GO:0097708,GO:0098588,GO:0098791,GO:0140096,GO:0140103,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.4.1.214,2.4.1.65,3.6.1.3 0.000000000000000000000000000000000000000009762 168.0
MMS3_k127_1310152_11 protein methyltransferase activity - - - 0.000000000000000000000000000000365 132.0
MMS3_k127_1310152_12 involved in cell wall biogenesis - - - 0.00000000000000000000002875 110.0
MMS3_k127_1310152_13 Methyltransferase type 11 - - - 0.000000000000000000007758 102.0
MMS3_k127_1310152_14 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000007673 84.0
MMS3_k127_1310152_17 Protein of unknown function (DUF1211) - - - 0.0003328 44.0
MMS3_k127_1310152_2 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 424.0
MMS3_k127_1310152_3 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 355.0
MMS3_k127_1310152_4 IstB-like ATP binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 308.0
MMS3_k127_1310152_5 Glycosyltransferase sugar-binding region containing DXD motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 291.0
MMS3_k127_1310152_6 transferase activity, transferring glycosyl groups K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000006008 242.0
MMS3_k127_1310152_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000003871 191.0
MMS3_k127_1310152_9 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000007672 176.0
MMS3_k127_1354830_0 DEAD/H associated K03724 - - 9.48e-284 889.0
MMS3_k127_1354830_1 TonB dependent receptor - - - 6.965e-260 822.0
MMS3_k127_1354830_2 TerB-C domain - - - 3.641e-236 752.0
MMS3_k127_1354830_3 P-loop Domain of unknown function (DUF2791) - - - 2.605e-206 649.0
MMS3_k127_1354830_4 High-affinity nickel-transport protein K07241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 456.0
MMS3_k127_1354830_5 Phage integrase family K07358 GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0015074,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000001783 199.0
MMS3_k127_1354830_6 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.00000000000000004328 85.0
MMS3_k127_1354830_7 - - - - 0.00000000000000946 84.0
MMS3_k127_136023_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114 1.17.1.9 0.0 1370.0
MMS3_k127_136023_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1108.0
MMS3_k127_136023_10 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 513.0
MMS3_k127_136023_11 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 502.0
MMS3_k127_136023_12 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 461.0
MMS3_k127_136023_13 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 423.0
MMS3_k127_136023_14 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 410.0
MMS3_k127_136023_15 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 398.0
MMS3_k127_136023_16 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 393.0
MMS3_k127_136023_17 Belongs to the TtcA family K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 370.0
MMS3_k127_136023_18 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 356.0
MMS3_k127_136023_19 response regulator receiver K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 359.0
MMS3_k127_136023_2 PFAM TrkA-N domain K03499 - - 6.039e-233 727.0
MMS3_k127_136023_20 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 351.0
MMS3_k127_136023_21 Arm DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 334.0
MMS3_k127_136023_22 PFAM Peptidoglycan-binding lysin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 331.0
MMS3_k127_136023_23 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 325.0
MMS3_k127_136023_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 317.0
MMS3_k127_136023_25 imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 307.0
MMS3_k127_136023_26 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 304.0
MMS3_k127_136023_27 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 299.0
MMS3_k127_136023_28 Transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 292.0
MMS3_k127_136023_29 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 293.0
MMS3_k127_136023_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.719e-232 728.0
MMS3_k127_136023_30 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 302.0
MMS3_k127_136023_31 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 291.0
MMS3_k127_136023_32 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000008689 248.0
MMS3_k127_136023_33 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000003615 224.0
MMS3_k127_136023_34 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000007372 212.0
MMS3_k127_136023_35 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000000000002813 199.0
MMS3_k127_136023_36 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000009698 197.0
MMS3_k127_136023_37 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000000000000000002621 186.0
MMS3_k127_136023_38 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000001184 183.0
MMS3_k127_136023_39 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000009783 177.0
MMS3_k127_136023_4 Circularly permuted ATP-grasp type 2 - - - 3.179e-216 680.0
MMS3_k127_136023_40 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000000005243 150.0
MMS3_k127_136023_41 DoxX K15977 - - 0.00000000000000000000000000000000000002582 147.0
MMS3_k127_136023_42 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000003873 134.0
MMS3_k127_136023_43 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000004102 133.0
MMS3_k127_136023_44 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000001058 102.0
MMS3_k127_136023_45 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000001143 104.0
MMS3_k127_136023_46 Transposase K07483 - - 0.000000000000000000003029 96.0
MMS3_k127_136023_47 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000003954 100.0
MMS3_k127_136023_48 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000006477 77.0
MMS3_k127_136023_49 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000001169 62.0
MMS3_k127_136023_5 signal transduction histidine kinase - - - 3.145e-202 652.0
MMS3_k127_136023_50 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000003488 55.0
MMS3_k127_136023_51 Protein of unknown function (DUF1641) - - - 0.000000095 59.0
MMS3_k127_136023_52 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000003462 50.0
MMS3_k127_136023_53 Helix-turn-helix domain K07483 - - 0.0005146 47.0
MMS3_k127_136023_54 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0005305 48.0
MMS3_k127_136023_6 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 9.909e-202 638.0
MMS3_k127_136023_7 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 2.135e-195 627.0
MMS3_k127_136023_8 Trk system potassium uptake protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 545.0
MMS3_k127_136023_9 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 522.0
MMS3_k127_1379996_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1853.0
MMS3_k127_1379996_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1699.0
MMS3_k127_1379996_10 Sugar (and other) transporter K08369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 612.0
MMS3_k127_1379996_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 469.0
MMS3_k127_1379996_12 PFAM Polyphosphate kinase 2 K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 448.0
MMS3_k127_1379996_13 Major facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 413.0
MMS3_k127_1379996_14 outer membrane autotransporter barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 408.0
MMS3_k127_1379996_15 Citation J Bacteriol. 2002 Dec - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 353.0
MMS3_k127_1379996_16 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 347.0
MMS3_k127_1379996_17 Phosphate acetyl/butaryl transferase K00634 - 2.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 336.0
MMS3_k127_1379996_18 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 327.0
MMS3_k127_1379996_19 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 292.0
MMS3_k127_1379996_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1360.0
MMS3_k127_1379996_20 Autotransporter beta-domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 327.0
MMS3_k127_1379996_21 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001115 281.0
MMS3_k127_1379996_22 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002938 283.0
MMS3_k127_1379996_23 subfamily IA, variant 1 K20862 - 3.1.3.102,3.1.3.104 0.000000000000000000000000000000000000000000000000000000000000000000000000001219 260.0
MMS3_k127_1379996_24 carboxymethylenebutenolidase activity K01061,K07100 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000007199 236.0
MMS3_k127_1379996_25 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000004381 236.0
MMS3_k127_1379996_26 SapC - - - 0.00000000000000000000000000000000000000000000000000000001905 205.0
MMS3_k127_1379996_28 Protein of unknown function (DUF3775) - - - 0.000000000000000000000000000000000000000000001825 167.0
MMS3_k127_1379996_29 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000001407 151.0
MMS3_k127_1379996_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 - 3.6.3.6 0.0 1310.0
MMS3_k127_1379996_30 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000006486 107.0
MMS3_k127_1379996_32 - - - - 0.00003266 51.0
MMS3_k127_1379996_33 - - - - 0.00007066 46.0
MMS3_k127_1379996_4 HsdM N-terminal domain K03427 - 2.1.1.72 4.704e-280 864.0
MMS3_k127_1379996_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.25e-261 824.0
MMS3_k127_1379996_6 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 2.21e-250 783.0
MMS3_k127_1379996_7 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 1.945e-232 725.0
MMS3_k127_1379996_8 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 2.797e-216 686.0
MMS3_k127_1379996_9 FtsX-like permease family K02004 - - 1.524e-204 664.0
MMS3_k127_1537181_0 G-rich domain on putative tyrosine kinase - - - 4.549e-209 676.0
MMS3_k127_1537181_1 HipA domain protein K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 573.0
MMS3_k127_1537181_10 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007996 270.0
MMS3_k127_1537181_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005538 273.0
MMS3_k127_1537181_12 transposase, IS891 IS1136 IS1341 family K07496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005711 256.0
MMS3_k127_1537181_13 capsular polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002631 259.0
MMS3_k127_1537181_14 flavoprotein - - - 0.00000000000000000000000000000000000000000000000000000000001539 212.0
MMS3_k127_1537181_15 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000000000000000000000003707 213.0
MMS3_k127_1537181_16 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000002739 202.0
MMS3_k127_1537181_17 zeta toxin - - - 0.000000000000000000000000000000000000000000000000000009616 195.0
MMS3_k127_1537181_18 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000007111 201.0
MMS3_k127_1537181_19 Methyltransferase FkbM family - - - 0.000000000000000000000000000000000000000000000000007817 187.0
MMS3_k127_1537181_2 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007969 539.0
MMS3_k127_1537181_20 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000001494 172.0
MMS3_k127_1537181_21 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000006067 122.0
MMS3_k127_1537181_22 Glycosyl transferases group 1 - - - 0.00000000000000000000000000001498 120.0
MMS3_k127_1537181_23 Methyltransferase FkbM domain - - - 0.0000000000000006159 78.0
MMS3_k127_1537181_24 Plasmid stability protein K21495 - - 0.00000000000004537 72.0
MMS3_k127_1537181_25 Transposase DDE domain - - - 0.00000000000008934 74.0
MMS3_k127_1537181_26 Glycosyl transferases group 1 - - - 0.000008278 48.0
MMS3_k127_1537181_27 PFAM glycosyl transferase family 9 K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0003314 43.0
MMS3_k127_1537181_28 Glycosyl transferases group 1 - - - 0.0004308 46.0
MMS3_k127_1537181_3 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 519.0
MMS3_k127_1537181_4 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 485.0
MMS3_k127_1537181_5 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 418.0
MMS3_k127_1537181_6 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 409.0
MMS3_k127_1537181_7 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 374.0
MMS3_k127_1537181_8 PFAM glycosyl transferase family 9 K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 374.0
MMS3_k127_1537181_9 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 294.0
MMS3_k127_154539_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1518.0
MMS3_k127_154539_1 PAS domain containing protein K21084 - 2.7.7.65 0.0 1498.0
MMS3_k127_154539_10 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 578.0
MMS3_k127_154539_11 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 543.0
MMS3_k127_154539_12 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 538.0
MMS3_k127_154539_13 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 537.0
MMS3_k127_154539_14 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 520.0
MMS3_k127_154539_15 Sulfate adenylyltransferase K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 487.0
MMS3_k127_154539_16 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 483.0
MMS3_k127_154539_17 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 456.0
MMS3_k127_154539_18 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 396.0
MMS3_k127_154539_19 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 399.0
MMS3_k127_154539_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 2.998e-310 959.0
MMS3_k127_154539_20 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 370.0
MMS3_k127_154539_21 Sodium calcium exchanger K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 324.0
MMS3_k127_154539_22 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 304.0
MMS3_k127_154539_23 queuosine salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001025 272.0
MMS3_k127_154539_24 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000004262 253.0
MMS3_k127_154539_25 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000000002021 246.0
MMS3_k127_154539_26 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000001055 218.0
MMS3_k127_154539_27 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000000000001474 189.0
MMS3_k127_154539_28 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000000000000007941 196.0
MMS3_k127_154539_29 Belongs to the HesB IscA family K05997,K13628 - - 0.000000000000000000000000000000000000000000000000008602 181.0
MMS3_k127_154539_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.603e-306 943.0
MMS3_k127_154539_30 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.0000000000000000000000000000000000000000000000003142 185.0
MMS3_k127_154539_31 NifU-like domain K19168 - - 0.00000000000000000000000000000000000000000000002288 174.0
MMS3_k127_154539_32 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.0000000000000000000000000000000000000000000003521 172.0
MMS3_k127_154539_33 Diguanylate cyclase with PAS PAC - - - 0.000000000000000000000000000000000000000000001722 184.0
MMS3_k127_154539_34 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000006222 164.0
MMS3_k127_154539_35 Protein of unknown function (DUF1249) K09920 - - 0.0000000000000000000000000000000000001198 147.0
MMS3_k127_154539_36 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000004385 147.0
MMS3_k127_154539_37 cold-shock protein K03704 - - 0.0000000000000000000000000000007912 123.0
MMS3_k127_154539_38 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.00000000000000000000000001795 109.0
MMS3_k127_154539_39 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000001304 119.0
MMS3_k127_154539_4 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 6.231e-271 845.0
MMS3_k127_154539_40 Succinate dehydrogenase hydrophobic membrane anchor K00242 - - 0.0000000000000000000000001914 112.0
MMS3_k127_154539_41 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.000000000000000000000001163 108.0
MMS3_k127_154539_42 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.000000000000000007002 89.0
MMS3_k127_154539_43 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000003088 83.0
MMS3_k127_154539_45 Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins K22068 GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031974,GO:0034470,GO:0034641,GO:0034660,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0046483,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097428,GO:0098771,GO:1901360,GO:1901564 - 0.000000001429 59.0
MMS3_k127_154539_46 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K19168 - - 0.00000000674 64.0
MMS3_k127_154539_5 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 5.052e-268 838.0
MMS3_k127_154539_6 Phosphoglucomutase K01835 - 5.4.2.2 1.445e-235 741.0
MMS3_k127_154539_7 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.777e-227 711.0
MMS3_k127_154539_8 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 4.799e-199 627.0
MMS3_k127_154539_9 Single-stranded-DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 620.0
MMS3_k127_154601_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1687.0
MMS3_k127_154601_1 Putative diguanylate phosphodiesterase - - - 0.0 1335.0
MMS3_k127_154601_10 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 3.915e-252 799.0
MMS3_k127_154601_100 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 292.0
MMS3_k127_154601_101 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 287.0
MMS3_k127_154601_102 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 290.0
MMS3_k127_154601_103 PFAM protein phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001621 282.0
MMS3_k127_154601_104 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002171 278.0
MMS3_k127_154601_105 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002854 283.0
MMS3_k127_154601_106 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008716 277.0
MMS3_k127_154601_107 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002809 271.0
MMS3_k127_154601_108 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002439 274.0
MMS3_k127_154601_109 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000002635 254.0
MMS3_k127_154601_11 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.086e-247 772.0
MMS3_k127_154601_110 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003035 249.0
MMS3_k127_154601_111 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000007168 244.0
MMS3_k127_154601_112 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000163 241.0
MMS3_k127_154601_113 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000001449 233.0
MMS3_k127_154601_114 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000002286 233.0
MMS3_k127_154601_115 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001096 231.0
MMS3_k127_154601_116 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000002208 226.0
MMS3_k127_154601_117 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000004677 229.0
MMS3_k127_154601_118 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000008656 220.0
MMS3_k127_154601_119 Cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000000000000000002085 208.0
MMS3_k127_154601_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.036e-247 768.0
MMS3_k127_154601_120 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000000000000000000003982 203.0
MMS3_k127_154601_121 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000005862 199.0
MMS3_k127_154601_122 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000008031 202.0
MMS3_k127_154601_123 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000001537 199.0
MMS3_k127_154601_124 Colicin V production protein K03558 - - 0.00000000000000000000000000000000000000000000000000874 185.0
MMS3_k127_154601_125 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000421 184.0
MMS3_k127_154601_126 ATPase or kinase K06925 - - 0.0000000000000000000000000000000000000000000000004522 179.0
MMS3_k127_154601_127 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000000006334 176.0
MMS3_k127_154601_128 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000005278 169.0
MMS3_k127_154601_129 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000001687 157.0
MMS3_k127_154601_13 Participates in both transcription termination and antitermination K02600 - - 8.499e-246 767.0
MMS3_k127_154601_130 PFAM methyltransferase - - - 0.00000000000000000000000000000000000000001143 163.0
MMS3_k127_154601_131 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000001236 155.0
MMS3_k127_154601_132 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000005089 154.0
MMS3_k127_154601_133 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000007663 151.0
MMS3_k127_154601_134 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000000000000000000000000000000000008786 151.0
MMS3_k127_154601_135 PFAM Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000001642 143.0
MMS3_k127_154601_136 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000001168 139.0
MMS3_k127_154601_137 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000002165 136.0
MMS3_k127_154601_138 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03805 - - 0.0000000000000000000000000000000382 133.0
MMS3_k127_154601_139 Mannosyl-3-phosphoglycerate phosphatase K07026,K15918 - 2.7.1.31,3.1.3.70 0.00000000000000000000000000000007239 135.0
MMS3_k127_154601_14 PFAM ABC transporter K02471 - - 2.477e-243 766.0
MMS3_k127_154601_140 - - - - 0.00000000000000000000000000003608 121.0
MMS3_k127_154601_141 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000002276 112.0
MMS3_k127_154601_142 Protein of unknown function (DUF2818) - - - 0.00000000000000000000000000284 116.0
MMS3_k127_154601_143 - - - - 0.000000000000000000000000007224 120.0
MMS3_k127_154601_144 - - - - 0.000000000000000000000000143 110.0
MMS3_k127_154601_145 Carbon-nitrogen hydrolase K01426 - 3.5.1.4 0.0000000000000000000000002449 105.0
MMS3_k127_154601_146 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000002458 109.0
MMS3_k127_154601_147 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000002297 99.0
MMS3_k127_154601_148 regulatory protein, arsR - - - 0.0000000000000000000003931 101.0
MMS3_k127_154601_149 Sporulation related domain K03749 - - 0.00000000000000000002733 100.0
MMS3_k127_154601_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.065e-241 751.0
MMS3_k127_154601_150 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000005007 91.0
MMS3_k127_154601_151 Putative transposase DNA-binding domain K07496 - - 0.00000000000000000163 88.0
MMS3_k127_154601_152 Protein of unknown function (DUF465) - - - 0.00000000000000001957 84.0
MMS3_k127_154601_153 CRS1_YhbY K07574 - - 0.00000000000000004227 84.0
MMS3_k127_154601_154 - - - - 0.00000000000001214 74.0
MMS3_k127_154601_155 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000005738 73.0
MMS3_k127_154601_156 Probable transposase K07496 - - 0.00000000000008145 72.0
MMS3_k127_154601_157 Hydrogenase maturation protease - - - 0.00000000002232 71.0
MMS3_k127_154601_158 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0000000008812 59.0
MMS3_k127_154601_159 - - - - 0.00000001332 57.0
MMS3_k127_154601_16 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 4.634e-238 754.0
MMS3_k127_154601_162 TIGRFAM transposase, IS605 OrfB family K07496 - - 0.0000008455 51.0
MMS3_k127_154601_163 - - - - 0.000001979 49.0
MMS3_k127_154601_164 Putative transposase DNA-binding domain K07496 - - 0.00002083 47.0
MMS3_k127_154601_165 SlyX K03745 - - 0.00002609 49.0
MMS3_k127_154601_166 - - - - 0.0001081 48.0
MMS3_k127_154601_167 - - - - 0.000729 44.0
MMS3_k127_154601_17 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.754e-233 736.0
MMS3_k127_154601_18 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.021e-230 721.0
MMS3_k127_154601_19 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 7.244e-229 713.0
MMS3_k127_154601_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1272.0
MMS3_k127_154601_20 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 3.118e-225 703.0
MMS3_k127_154601_21 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 6.483e-217 677.0
MMS3_k127_154601_22 Glutamine synthetase, catalytic domain - - - 1.552e-213 670.0
MMS3_k127_154601_23 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 2.638e-212 669.0
MMS3_k127_154601_24 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.099e-207 654.0
MMS3_k127_154601_25 Amino acid permease - - - 1.508e-204 649.0
MMS3_k127_154601_26 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256,K16871 - 2.6.1.113,2.6.1.96 3.979e-197 623.0
MMS3_k127_154601_27 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 608.0
MMS3_k127_154601_28 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 609.0
MMS3_k127_154601_29 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 606.0
MMS3_k127_154601_3 Heat shock 70 kDa protein K04043 - - 0.0 1056.0
MMS3_k127_154601_30 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 603.0
MMS3_k127_154601_31 Probable transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 595.0
MMS3_k127_154601_32 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 574.0
MMS3_k127_154601_33 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 575.0
MMS3_k127_154601_34 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 569.0
MMS3_k127_154601_35 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 563.0
MMS3_k127_154601_36 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 563.0
MMS3_k127_154601_37 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 562.0
MMS3_k127_154601_38 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 551.0
MMS3_k127_154601_39 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 531.0
MMS3_k127_154601_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1043.0
MMS3_k127_154601_40 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 535.0
MMS3_k127_154601_41 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 539.0
MMS3_k127_154601_42 FAD dependent oxidoreductase K09471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 531.0
MMS3_k127_154601_43 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 524.0
MMS3_k127_154601_44 Hydrogenase formation hypA family K04654 GO:0003674,GO:0005488,GO:0005506,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0036211,GO:0042165,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0070025,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 524.0
MMS3_k127_154601_45 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 527.0
MMS3_k127_154601_46 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1990928 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 521.0
MMS3_k127_154601_47 Alpha amylase, catalytic domain K00690 - 2.4.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 528.0
MMS3_k127_154601_48 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 515.0
MMS3_k127_154601_49 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 506.0
MMS3_k127_154601_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1032.0
MMS3_k127_154601_50 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 509.0
MMS3_k127_154601_51 lytic transglycosylase K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 507.0
MMS3_k127_154601_52 PFAM Peptidase family M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 488.0
MMS3_k127_154601_53 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 466.0
MMS3_k127_154601_54 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 464.0
MMS3_k127_154601_55 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 451.0
MMS3_k127_154601_56 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 448.0
MMS3_k127_154601_57 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 445.0
MMS3_k127_154601_58 AIR synthase related protein, N-terminal domain K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 440.0
MMS3_k127_154601_59 Transcriptional regulator K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 437.0
MMS3_k127_154601_6 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.877e-291 896.0
MMS3_k127_154601_60 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 441.0
MMS3_k127_154601_61 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 436.0
MMS3_k127_154601_62 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 411.0
MMS3_k127_154601_63 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734 415.0
MMS3_k127_154601_64 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 399.0
MMS3_k127_154601_65 Major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009496 404.0
MMS3_k127_154601_66 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 396.0
MMS3_k127_154601_67 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009196 394.0
MMS3_k127_154601_68 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 388.0
MMS3_k127_154601_69 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 390.0
MMS3_k127_154601_7 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.766e-285 898.0
MMS3_k127_154601_70 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 392.0
MMS3_k127_154601_71 Glycosyltransferase Family 4 K02844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 389.0
MMS3_k127_154601_72 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 381.0
MMS3_k127_154601_73 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 373.0
MMS3_k127_154601_74 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008593 375.0
MMS3_k127_154601_75 CobW/HypB/UreG, nucleotide-binding domain K04652 GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0010467,GO:0016151,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 368.0
MMS3_k127_154601_76 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 368.0
MMS3_k127_154601_77 PFAM NADH Ubiquinone K18007 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 367.0
MMS3_k127_154601_78 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 363.0
MMS3_k127_154601_79 pfam mofrl K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 366.0
MMS3_k127_154601_8 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 3.004e-279 872.0
MMS3_k127_154601_80 Fumarylacetoacetate (FAA) hydrolase family K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 359.0
MMS3_k127_154601_81 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 351.0
MMS3_k127_154601_82 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 349.0
MMS3_k127_154601_83 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 346.0
MMS3_k127_154601_84 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 345.0
MMS3_k127_154601_85 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 352.0
MMS3_k127_154601_86 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 347.0
MMS3_k127_154601_87 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 343.0
MMS3_k127_154601_88 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 356.0
MMS3_k127_154601_89 FimV C-terminal K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 366.0
MMS3_k127_154601_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.483e-261 806.0
MMS3_k127_154601_90 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 327.0
MMS3_k127_154601_91 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 334.0
MMS3_k127_154601_92 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 325.0
MMS3_k127_154601_93 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 325.0
MMS3_k127_154601_94 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 320.0
MMS3_k127_154601_95 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 329.0
MMS3_k127_154601_96 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 318.0
MMS3_k127_154601_97 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 310.0
MMS3_k127_154601_98 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 306.0
MMS3_k127_154601_99 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 306.0
MMS3_k127_1547050_0 HAD-superfamily phosphatase subfamily IIIC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 584.0
MMS3_k127_1547050_1 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 367.0
MMS3_k127_1547050_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 343.0
MMS3_k127_1547050_3 Macrocin-O-methyltransferase (TylF) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000582 280.0
MMS3_k127_1547050_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004419 274.0
MMS3_k127_1547050_5 Replication initiation factor K07467 - - 0.000000000000000000000000000000000000000000000000002694 188.0
MMS3_k127_1547050_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000004574 184.0
MMS3_k127_1547050_7 LysR substrate binding domain - - - 0.0000000000000000007244 91.0
MMS3_k127_1547050_8 Transcriptional regulator - - - 0.0000000000041 70.0
MMS3_k127_1547050_9 transcriptional regulator K07733 - - 0.0000000005207 62.0
MMS3_k127_1579775_0 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 490.0
MMS3_k127_1579775_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 400.0
MMS3_k127_1579775_2 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006492 245.0
MMS3_k127_1579775_3 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.0000000000000000000000000000000000000000000000000002793 195.0
MMS3_k127_1579775_4 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000003062 188.0
MMS3_k127_1579775_5 - - - - 0.0000000000000000000000000000000001559 134.0
MMS3_k127_1579775_6 Frataxin-like domain K06202 - - 0.00000000000000000000000000000002568 129.0
MMS3_k127_1579775_7 Protein of unknown function (DUF423) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000006488 109.0
MMS3_k127_1579775_8 Bacterial lipid A biosynthesis acyltransferase K02560 - 2.3.1.243 0.000000000000000001403 89.0
MMS3_k127_1737856_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1425.0
MMS3_k127_1737856_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1235.0
MMS3_k127_1737856_10 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 545.0
MMS3_k127_1737856_11 type IV pilus assembly PilZ K00694 - 2.4.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 557.0
MMS3_k127_1737856_12 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 526.0
MMS3_k127_1737856_13 Type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 521.0
MMS3_k127_1737856_14 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 512.0
MMS3_k127_1737856_15 Response regulator receiver domain K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 509.0
MMS3_k127_1737856_16 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481,K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 502.0
MMS3_k127_1737856_17 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 488.0
MMS3_k127_1737856_18 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 491.0
MMS3_k127_1737856_19 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 467.0
MMS3_k127_1737856_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.285e-305 944.0
MMS3_k127_1737856_20 Sulphur transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 456.0
MMS3_k127_1737856_21 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 446.0
MMS3_k127_1737856_22 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 450.0
MMS3_k127_1737856_23 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 442.0
MMS3_k127_1737856_24 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 429.0
MMS3_k127_1737856_25 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 431.0
MMS3_k127_1737856_26 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 415.0
MMS3_k127_1737856_27 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 415.0
MMS3_k127_1737856_28 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 406.0
MMS3_k127_1737856_29 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 406.0
MMS3_k127_1737856_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.103e-226 705.0
MMS3_k127_1737856_30 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 385.0
MMS3_k127_1737856_31 Histidine kinase K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009904 391.0
MMS3_k127_1737856_32 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 367.0
MMS3_k127_1737856_33 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 359.0
MMS3_k127_1737856_34 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 345.0
MMS3_k127_1737856_35 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 341.0
MMS3_k127_1737856_36 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 336.0
MMS3_k127_1737856_37 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 338.0
MMS3_k127_1737856_38 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 336.0
MMS3_k127_1737856_39 Histidine kinase K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 335.0
MMS3_k127_1737856_4 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 3.663e-216 685.0
MMS3_k127_1737856_40 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 314.0
MMS3_k127_1737856_41 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 305.0
MMS3_k127_1737856_42 PFAM Glycosyl transferase family 2 K12990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 307.0
MMS3_k127_1737856_43 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004599 287.0
MMS3_k127_1737856_44 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000559 278.0
MMS3_k127_1737856_45 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008997 271.0
MMS3_k127_1737856_46 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002882 271.0
MMS3_k127_1737856_47 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007146 261.0
MMS3_k127_1737856_48 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000001081 228.0
MMS3_k127_1737856_49 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000000001022 211.0
MMS3_k127_1737856_5 Belongs to the MurCDEF family K01924 - 6.3.2.8 9.008e-208 655.0
MMS3_k127_1737856_50 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000241 209.0
MMS3_k127_1737856_51 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000002626 214.0
MMS3_k127_1737856_52 Putative TM nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000006406 209.0
MMS3_k127_1737856_53 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000217 212.0
MMS3_k127_1737856_54 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000009485 190.0
MMS3_k127_1737856_55 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000001419 183.0
MMS3_k127_1737856_56 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000002684 180.0
MMS3_k127_1737856_57 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000000000004711 164.0
MMS3_k127_1737856_58 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000004393 168.0
MMS3_k127_1737856_59 pfam nudix K08310 - 3.6.1.67 0.0000000000000000000000000000000000000001718 154.0
MMS3_k127_1737856_6 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.051e-206 655.0
MMS3_k127_1737856_60 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000866 146.0
MMS3_k127_1737856_61 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000003237 152.0
MMS3_k127_1737856_62 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000004301 139.0
MMS3_k127_1737856_63 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000007937 131.0
MMS3_k127_1737856_64 Putative regulatory protein - - - 0.0000000000000000000000000000001764 125.0
MMS3_k127_1737856_66 - - - - 0.00000000000000000000003441 109.0
MMS3_k127_1737856_67 Glycosyl transferase family 2 K07011 - - 0.000000000000000000006143 103.0
MMS3_k127_1737856_68 Cellulose biosynthesis protein BcsS - - - 0.0000000000000000001785 97.0
MMS3_k127_1737856_69 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000035 90.0
MMS3_k127_1737856_7 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 605.0
MMS3_k127_1737856_70 COG0810 Periplasmic protein TonB links inner and outer membranes K03646 - - 0.0000000000000000003571 98.0
MMS3_k127_1737856_72 Putative peptidoglycan binding domain - - - 0.000002471 56.0
MMS3_k127_1737856_73 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00001172 58.0
MMS3_k127_1737856_74 ISXO2-like transposase domain - - - 0.00001336 48.0
MMS3_k127_1737856_75 Zn-ribbon-containing, possibly RNA-binding protein - - - 0.0000398 49.0
MMS3_k127_1737856_8 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009989 598.0
MMS3_k127_1737856_9 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 543.0
MMS3_k127_1738324_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2721.0
MMS3_k127_1738324_1 FAD linked - - - 0.0 1947.0
MMS3_k127_1738324_10 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 6.193e-250 777.0
MMS3_k127_1738324_100 Peptidyl-prolyl cis-trans K03775 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010467,GO:0016151,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022417,GO:0031647,GO:0035821,GO:0036211,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043963,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044501,GO:0046872,GO:0046914,GO:0050821,GO:0050896,GO:0050897,GO:0051082,GO:0051604,GO:0051701,GO:0051704,GO:0051817,GO:0052027,GO:0052250,GO:0065007,GO:0065008,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000006173 222.0
MMS3_k127_1738324_101 TIGRFAM TonB family protein K03832 - - 0.0000000000000000000000000000000000000000000000000000000000008436 221.0
MMS3_k127_1738324_102 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000143 214.0
MMS3_k127_1738324_103 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000864 214.0
MMS3_k127_1738324_104 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000001403 210.0
MMS3_k127_1738324_105 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000004956 208.0
MMS3_k127_1738324_106 response regulator receiver K02657 - - 0.0000000000000000000000000000000000000000000000000000000006752 204.0
MMS3_k127_1738324_107 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000008427 202.0
MMS3_k127_1738324_108 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000000000000000000009232 201.0
MMS3_k127_1738324_109 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000001202 202.0
MMS3_k127_1738324_11 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 7.109e-232 725.0
MMS3_k127_1738324_110 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002447 199.0
MMS3_k127_1738324_111 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000007907 199.0
MMS3_k127_1738324_112 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000000000000005711 194.0
MMS3_k127_1738324_113 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.00000000000000000000000000000000000000000000000000001224 196.0
MMS3_k127_1738324_114 Pilus assembly protein PilO K02664 - - 0.00000000000000000000000000000000000000000000000000004248 198.0
MMS3_k127_1738324_115 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000004737 193.0
MMS3_k127_1738324_116 - - - - 0.0000000000000000000000000000000000000000000000000002852 190.0
MMS3_k127_1738324_117 response regulator receiver K02658 - - 0.0000000000000000000000000000000000000000000000000004575 186.0
MMS3_k127_1738324_118 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000000000007267 193.0
MMS3_k127_1738324_119 Copper resistance protein D - - - 0.00000000000000000000000000000000000000000000000003814 182.0
MMS3_k127_1738324_12 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 7.1e-227 710.0
MMS3_k127_1738324_120 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000000000000005996 184.0
MMS3_k127_1738324_121 Cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000001576 181.0
MMS3_k127_1738324_122 PFAM porin Gram-negative type - - - 0.0000000000000000000000000000000000000000000000003001 191.0
MMS3_k127_1738324_123 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000003746 182.0
MMS3_k127_1738324_124 belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000000000000000004773 179.0
MMS3_k127_1738324_125 pilus assembly protein PilP K02665 - - 0.000000000000000000000000000000000000000000000005241 179.0
MMS3_k127_1738324_126 surface antigen - - - 0.000000000000000000000000000000000000000000001305 174.0
MMS3_k127_1738324_127 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000001643 168.0
MMS3_k127_1738324_128 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000000000000000001446 163.0
MMS3_k127_1738324_129 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000002321 162.0
MMS3_k127_1738324_13 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.459e-224 705.0
MMS3_k127_1738324_130 Ferredoxin - - - 0.000000000000000000000000000000000000000003275 156.0
MMS3_k127_1738324_131 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000005279 153.0
MMS3_k127_1738324_132 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.0000000000000000000000000000000000001417 149.0
MMS3_k127_1738324_133 Protein of unknown function (DUF1244) K09948 - - 0.0000000000000000000000000000000000003102 143.0
MMS3_k127_1738324_134 - K07283 - - 0.000000000000000000000000000000000002784 146.0
MMS3_k127_1738324_135 protein conserved in bacteria - - - 0.0000000000000000000000000000000001878 138.0
MMS3_k127_1738324_136 Belongs to the UPF0149 family K09895 - - 0.000000000000000000000000000000004287 135.0
MMS3_k127_1738324_137 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000000000000002502 131.0
MMS3_k127_1738324_138 protein conserved in bacteria K09796 - - 0.00000000000000000000000000000004247 134.0
MMS3_k127_1738324_139 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000001029 126.0
MMS3_k127_1738324_14 chemotaxis K02660 - - 1.959e-221 707.0
MMS3_k127_1738324_140 PFAM CheW domain protein K02659 - - 0.0000000000000000000000000000001417 130.0
MMS3_k127_1738324_142 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000005055 122.0
MMS3_k127_1738324_143 - - - - 0.000000000000000000000000001461 116.0
MMS3_k127_1738324_144 - - - - 0.000000000000000000000000008251 115.0
MMS3_k127_1738324_145 - - - - 0.0000000000000000000000001686 110.0
MMS3_k127_1738324_146 - - - - 0.0000000000000000000000005772 109.0
MMS3_k127_1738324_147 Belongs to the BolA IbaG family - - - 0.0000000000000000000001574 100.0
MMS3_k127_1738324_148 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000001985 105.0
MMS3_k127_1738324_149 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000004952 88.0
MMS3_k127_1738324_15 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 6.399e-208 649.0
MMS3_k127_1738324_150 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000007562 85.0
MMS3_k127_1738324_151 DUF167 K09131 - - 0.0000000000001241 75.0
MMS3_k127_1738324_152 chemotaxis signal transduction protein K06598 - - 0.00000000000384 72.0
MMS3_k127_1738324_153 - - - - 0.000000001261 58.0
MMS3_k127_1738324_154 TIGRFAM TIGR02449 family protein K09892 - - 0.000000001519 62.0
MMS3_k127_1738324_155 - - - - 0.000003965 49.0
MMS3_k127_1738324_16 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.085e-207 657.0
MMS3_k127_1738324_17 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 2.289e-205 648.0
MMS3_k127_1738324_18 PFAM Type II secretion system protein E K02670 - - 2.145e-199 626.0
MMS3_k127_1738324_19 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.932e-199 627.0
MMS3_k127_1738324_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1464.0
MMS3_k127_1738324_20 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 3.004e-194 608.0
MMS3_k127_1738324_21 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 601.0
MMS3_k127_1738324_22 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 603.0
MMS3_k127_1738324_23 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 577.0
MMS3_k127_1738324_24 Chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 580.0
MMS3_k127_1738324_25 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 559.0
MMS3_k127_1738324_26 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 555.0
MMS3_k127_1738324_27 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 564.0
MMS3_k127_1738324_28 type IV pilus secretin PilQ K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 563.0
MMS3_k127_1738324_29 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 537.0
MMS3_k127_1738324_3 response regulator receiver K02487,K06596 - - 0.0 1186.0
MMS3_k127_1738324_30 PFAM Type II secretion system protein E K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 527.0
MMS3_k127_1738324_31 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 516.0
MMS3_k127_1738324_32 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 513.0
MMS3_k127_1738324_33 RND efflux system, outer membrane lipoprotein, NodT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 518.0
MMS3_k127_1738324_34 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 508.0
MMS3_k127_1738324_35 Histidine kinase K03406,K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 505.0
MMS3_k127_1738324_36 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 509.0
MMS3_k127_1738324_37 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 496.0
MMS3_k127_1738324_38 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 492.0
MMS3_k127_1738324_39 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 482.0
MMS3_k127_1738324_4 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1105.0
MMS3_k127_1738324_40 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 489.0
MMS3_k127_1738324_41 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 484.0
MMS3_k127_1738324_42 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 492.0
MMS3_k127_1738324_43 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 477.0
MMS3_k127_1738324_44 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 472.0
MMS3_k127_1738324_45 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 465.0
MMS3_k127_1738324_46 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 454.0
MMS3_k127_1738324_47 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008848 450.0
MMS3_k127_1738324_48 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 444.0
MMS3_k127_1738324_49 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 449.0
MMS3_k127_1738324_5 PFAM von Willebrand factor type A - - - 0.0 1037.0
MMS3_k127_1738324_50 Guanine deaminase K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 447.0
MMS3_k127_1738324_51 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 438.0
MMS3_k127_1738324_52 chloride channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 443.0
MMS3_k127_1738324_53 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 424.0
MMS3_k127_1738324_54 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 418.0
MMS3_k127_1738324_55 C4-dicarboxylate transporter malic acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 417.0
MMS3_k127_1738324_56 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 415.0
MMS3_k127_1738324_57 Oxidoreductase FAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 406.0
MMS3_k127_1738324_58 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 402.0
MMS3_k127_1738324_59 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 402.0
MMS3_k127_1738324_6 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 5.691e-305 935.0
MMS3_k127_1738324_60 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 396.0
MMS3_k127_1738324_61 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 393.0
MMS3_k127_1738324_62 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 385.0
MMS3_k127_1738324_63 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 377.0
MMS3_k127_1738324_64 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006758 383.0
MMS3_k127_1738324_65 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 382.0
MMS3_k127_1738324_66 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 355.0
MMS3_k127_1738324_67 Transcriptional regulator, LysR K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 352.0
MMS3_k127_1738324_68 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 341.0
MMS3_k127_1738324_69 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 340.0
MMS3_k127_1738324_7 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 2.021e-275 871.0
MMS3_k127_1738324_70 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009609 346.0
MMS3_k127_1738324_71 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 322.0
MMS3_k127_1738324_72 3'(2'),5'-bisphosphate nucleotidase K01082 GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008896 318.0
MMS3_k127_1738324_73 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 312.0
MMS3_k127_1738324_74 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 309.0
MMS3_k127_1738324_75 Phosphate transport system permease protein K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 311.0
MMS3_k127_1738324_76 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 310.0
MMS3_k127_1738324_77 glutathione transferase activity K00799,K03675 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 302.0
MMS3_k127_1738324_78 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 295.0
MMS3_k127_1738324_79 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 299.0
MMS3_k127_1738324_8 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 5.293e-257 798.0
MMS3_k127_1738324_80 Cysteine-rich domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 303.0
MMS3_k127_1738324_81 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 291.0
MMS3_k127_1738324_82 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006464,GO:0006479,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016740,GO:0016741,GO:0018364,GO:0019222,GO:0019538,GO:0022411,GO:0032259,GO:0032984,GO:0034641,GO:0034645,GO:0036009,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 288.0
MMS3_k127_1738324_83 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 282.0
MMS3_k127_1738324_84 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009565 276.0
MMS3_k127_1738324_85 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000359 270.0
MMS3_k127_1738324_86 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003598 263.0
MMS3_k127_1738324_87 PFAM NUDIX hydrolase K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001208 255.0
MMS3_k127_1738324_88 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000001233 256.0
MMS3_k127_1738324_89 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001352 247.0
MMS3_k127_1738324_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.778e-251 782.0
MMS3_k127_1738324_90 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000158 247.0
MMS3_k127_1738324_91 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000002756 241.0
MMS3_k127_1738324_92 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000004901 239.0
MMS3_k127_1738324_93 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000003578 239.0
MMS3_k127_1738324_94 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000002063 229.0
MMS3_k127_1738324_95 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000007823 233.0
MMS3_k127_1738324_96 redox protein, regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000000000000000000000000000000000000001746 220.0
MMS3_k127_1738324_97 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000004494 221.0
MMS3_k127_1738324_98 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000001026 218.0
MMS3_k127_1738324_99 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000001051 219.0
MMS3_k127_1773347_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 1.496e-223 707.0
MMS3_k127_1773347_1 Rod shape-determining protein (MreB) K03569 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 - 1.504e-196 616.0
MMS3_k127_1773347_10 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.0000000134 59.0
MMS3_k127_1773347_11 Protein of unknown function (DUF1634) - - - 0.0000002657 57.0
MMS3_k127_1773347_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 484.0
MMS3_k127_1773347_3 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 289.0
MMS3_k127_1773347_4 protein transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001219 254.0
MMS3_k127_1773347_5 regulation of cell shape K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.0000000000000000000000000000000000000000000000000000000000000000000001888 246.0
MMS3_k127_1773347_6 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000001594 220.0
MMS3_k127_1773347_7 - - - - 0.0000000000000000000000000000000000002029 149.0
MMS3_k127_1773347_9 - - - - 0.000000001775 61.0
MMS3_k127_1805337_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 5.35e-249 773.0
MMS3_k127_1805337_1 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 473.0
MMS3_k127_1805337_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 396.0
MMS3_k127_1805337_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 398.0
MMS3_k127_1805337_4 Transcriptional regulator K07722 - - 0.000000000000000000000000000000000000000000000000000001795 195.0
MMS3_k127_1805337_5 Small Multidrug Resistance protein K03297 - - 0.00000000000000000000000000000000003236 138.0
MMS3_k127_1805337_6 NMT1/THI5 like - - - 0.00000008438 53.0
MMS3_k127_1845559_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1246.0
MMS3_k127_1845559_1 sucrose synthase K00695 - 2.4.1.13 0.0 1071.0
MMS3_k127_1845559_10 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 404.0
MMS3_k127_1845559_11 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 387.0
MMS3_k127_1845559_12 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 364.0
MMS3_k127_1845559_13 signal transduction histidine kinase K15011 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 341.0
MMS3_k127_1845559_14 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 312.0
MMS3_k127_1845559_15 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 310.0
MMS3_k127_1845559_16 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 293.0
MMS3_k127_1845559_17 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0006950,GO:0006979,GO:0008113,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0030091,GO:0033744,GO:0036456,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114,GO:0071704,GO:1901564 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 282.0
MMS3_k127_1845559_18 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000133 286.0
MMS3_k127_1845559_19 catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001176 277.0
MMS3_k127_1845559_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1043.0
MMS3_k127_1845559_20 PfkB domain protein K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000457 279.0
MMS3_k127_1845559_21 copper resistance K07245,K14166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005039 252.0
MMS3_k127_1845559_22 Oxidoreductase FAD-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000285 235.0
MMS3_k127_1845559_23 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000005677 231.0
MMS3_k127_1845559_24 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.0000000000000000000000000000000000000000000000000000000000958 209.0
MMS3_k127_1845559_25 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000001799 208.0
MMS3_k127_1845559_26 YfaZ precursor - - - 0.00000000000000000000000000000000000000000002385 167.0
MMS3_k127_1845559_27 Cytochrome c - - - 0.0000000000000000000000000000000000000000006795 166.0
MMS3_k127_1845559_28 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000001205 160.0
MMS3_k127_1845559_29 SpoIIAA-like - - - 0.00000000000000000000000000000000000000007028 154.0
MMS3_k127_1845559_3 Sucrose phosphate synthase, sucrose phosphatase-like K00696 - 2.4.1.14 6.458e-274 860.0
MMS3_k127_1845559_30 DSBA-like thioredoxin domain K03673 - - 0.0000000000000000000000000000000000000001122 160.0
MMS3_k127_1845559_31 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000003347 160.0
MMS3_k127_1845559_32 Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000000000000343 154.0
MMS3_k127_1845559_33 Domain of unknown function (DUF1820) - - - 0.00000000000000000000000000000000003881 137.0
MMS3_k127_1845559_34 resistance protein CopC K07156 - - 0.0000000000000000000000000006184 119.0
MMS3_k127_1845559_35 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000967 119.0
MMS3_k127_1845559_36 Protein of unknown function (DUF2493) - - - 0.00000000000000000005727 93.0
MMS3_k127_1845559_37 PFAM cytochrome c class I K08738 - - 0.00000000000000001793 89.0
MMS3_k127_1845559_38 TIGRFAM thiamine biosynthesis protein ThiS K03154 - - 0.00000000000000002673 85.0
MMS3_k127_1845559_39 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.000000000000002355 83.0
MMS3_k127_1845559_4 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0099046,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 1.966e-272 878.0
MMS3_k127_1845559_40 Mortierella verticillata NRRL 6337 - - - 0.000000000001207 75.0
MMS3_k127_1845559_43 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.0001147 45.0
MMS3_k127_1845559_5 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 4.197e-227 742.0
MMS3_k127_1845559_6 ResB-like family K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 620.0
MMS3_k127_1845559_7 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 478.0
MMS3_k127_1845559_8 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 439.0
MMS3_k127_1845559_9 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 439.0
MMS3_k127_1846454_0 TonB dependent receptor K02014 - - 7.538e-197 637.0
MMS3_k127_1846454_1 Phosphoesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 560.0
MMS3_k127_1846454_10 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001365 260.0
MMS3_k127_1846454_11 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007204 228.0
MMS3_k127_1846454_12 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000002753 217.0
MMS3_k127_1846454_13 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000002759 213.0
MMS3_k127_1846454_14 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000004971 210.0
MMS3_k127_1846454_15 TIGRFAM transposase, IS605 OrfB family - - - 0.0000000000000000000000000000000000000003164 151.0
MMS3_k127_1846454_16 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000001133 149.0
MMS3_k127_1846454_17 PFAM CHAD domain containing protein - - - 0.00000000000000000000000000000000006994 145.0
MMS3_k127_1846454_18 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000001004 109.0
MMS3_k127_1846454_19 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0042221,GO:0042802,GO:0046688,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000002322 108.0
MMS3_k127_1846454_2 S-adenosylmethionine diacylglycerol 3-amino-3-carboxypropyl transferase K13622 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 520.0
MMS3_k127_1846454_20 Acetyltransferase (GNAT) family - - - 0.000000000000000000001014 100.0
MMS3_k127_1846454_21 phosphate regulon transcriptional regulatory protein PhoB K07657 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000002452 61.0
MMS3_k127_1846454_3 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 485.0
MMS3_k127_1846454_4 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 468.0
MMS3_k127_1846454_5 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 347.0
MMS3_k127_1846454_6 ABC transporter K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 310.0
MMS3_k127_1846454_7 ABC transporter K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 308.0
MMS3_k127_1846454_8 ubiE/COQ5 methyltransferase family K13623 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001001 282.0
MMS3_k127_1846454_9 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001711 266.0
MMS3_k127_2071047_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1102.0
MMS3_k127_2071047_1 Glycosyl hydrolase family 57 - - - 1.552e-242 757.0
MMS3_k127_2071047_10 Membrane - - - 0.0000000000000000000000000000000000000002835 158.0
MMS3_k127_2071047_11 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000001236 92.0
MMS3_k127_2071047_12 - - - - 0.00000000003265 66.0
MMS3_k127_2071047_13 - - - - 0.00004694 49.0
MMS3_k127_2071047_14 Polyketide cyclase / dehydrase and lipid transport - - - 0.0005693 43.0
MMS3_k127_2071047_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 8.777e-228 715.0
MMS3_k127_2071047_3 COG0659 Sulfate permease and related transporters (MFS superfamily K03321 - - 3.981e-219 690.0
MMS3_k127_2071047_4 Belongs to the glycosyl hydrolase 57 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 545.0
MMS3_k127_2071047_5 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 358.0
MMS3_k127_2071047_6 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 311.0
MMS3_k127_2071047_7 Alanine acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003868 255.0
MMS3_k127_2071047_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000139 203.0
MMS3_k127_2071047_9 PhnA Zinc-Ribbon K06193 - - 0.00000000000000000000000000000000000000000000000008209 180.0
MMS3_k127_2200022_0 GTP-binding protein TypA K06207 - - 1e-323 999.0
MMS3_k127_2200022_1 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 5.178e-310 957.0
MMS3_k127_2200022_10 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 332.0
MMS3_k127_2200022_11 PFAM conserved K02069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 320.0
MMS3_k127_2200022_12 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 321.0
MMS3_k127_2200022_13 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 309.0
MMS3_k127_2200022_14 Cytochrome c oxidase K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001975 269.0
MMS3_k127_2200022_15 Uncharacterized conserved protein (DUF2249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004405 262.0
MMS3_k127_2200022_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001192 271.0
MMS3_k127_2200022_17 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004831 253.0
MMS3_k127_2200022_18 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001701 241.0
MMS3_k127_2200022_19 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000001249 240.0
MMS3_k127_2200022_2 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 9.698e-262 820.0
MMS3_k127_2200022_20 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000128 228.0
MMS3_k127_2200022_21 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000004172 216.0
MMS3_k127_2200022_22 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000001703 218.0
MMS3_k127_2200022_23 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000003322 205.0
MMS3_k127_2200022_24 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000000000000008375 196.0
MMS3_k127_2200022_25 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000002432 189.0
MMS3_k127_2200022_26 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000001951 185.0
MMS3_k127_2200022_27 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.00000000000000000000000000000000000000000000000008764 182.0
MMS3_k127_2200022_28 Urease, gamma subunit K01430,K14048 - 3.5.1.5 0.0000000000000000000000000000000000000000000000008165 177.0
MMS3_k127_2200022_29 - - - - 0.000000000000000000000000000000000000000000000001262 187.0
MMS3_k127_2200022_3 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 8.224e-205 645.0
MMS3_k127_2200022_30 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000008879 166.0
MMS3_k127_2200022_31 Belongs to the urease beta subunit family K01429 GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009039,GO:0016787,GO:0016810,GO:0016811 3.5.1.5 0.000000000000000000000000000000000000000000563 160.0
MMS3_k127_2200022_32 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000000000000000000000003414 155.0
MMS3_k127_2200022_33 PFAM Blue (type 1) copper domain K18683 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000007057 147.0
MMS3_k127_2200022_34 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000001954 138.0
MMS3_k127_2200022_35 PFAM Bacterial regulatory protein, arsR family K03892 - - 0.00000000000000000000000000000002044 130.0
MMS3_k127_2200022_36 YcgL domain K09902 - - 0.000000000000000000000001486 104.0
MMS3_k127_2200022_37 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000002881 94.0
MMS3_k127_2200022_38 Membrane fusogenic activity K09806 - - 0.000000000000001636 79.0
MMS3_k127_2200022_39 SCO1/SenC K07152 - - 0.0000000000006172 78.0
MMS3_k127_2200022_4 Cytochrome C and Quinol oxidase polypeptide I K02274,K02827 - 1.10.3.12,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 606.0
MMS3_k127_2200022_40 SCO1/SenC K07152 - - 0.000000000001083 78.0
MMS3_k127_2200022_41 SCO1/SenC K07152 - - 0.000000000957 69.0
MMS3_k127_2200022_43 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000003103 65.0
MMS3_k127_2200022_44 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000002046 61.0
MMS3_k127_2200022_45 Probable transposase - - - 0.00004156 46.0
MMS3_k127_2200022_5 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 544.0
MMS3_k127_2200022_6 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 498.0
MMS3_k127_2200022_7 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 439.0
MMS3_k127_2200022_8 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 412.0
MMS3_k127_2200022_9 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 329.0
MMS3_k127_2388367_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 1.881e-280 909.0
MMS3_k127_2388367_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 5.849e-272 844.0
MMS3_k127_2388367_10 Protein of unknown function (DUF3311) - - - 0.000000000000000000000000001066 113.0
MMS3_k127_2388367_11 Nucleotidyltransferase - - - 0.000000000000000000000000002673 124.0
MMS3_k127_2388367_12 transposase, IS891 IS1136 IS1341 family K07496 - - 0.00000000000000000000000005679 108.0
MMS3_k127_2388367_13 transcriptional regulator - - - 0.000000000000000000000001506 105.0
MMS3_k127_2388367_14 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000001024 92.0
MMS3_k127_2388367_15 reverse transcriptase K00986 - 2.7.7.49 0.0002586 47.0
MMS3_k127_2388367_16 - - - - 0.0004391 44.0
MMS3_k127_2388367_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 560.0
MMS3_k127_2388367_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 317.0
MMS3_k127_2388367_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 317.0
MMS3_k127_2388367_5 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 290.0
MMS3_k127_2388367_6 PFAM Response regulator receiver domain K07689 - - 0.000000000000000000000000000000000000000000000000000000000000000008717 231.0
MMS3_k127_2388367_7 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000009295 211.0
MMS3_k127_2388367_8 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000001252 196.0
MMS3_k127_2388367_9 transcriptional regulator K01420 - - 0.0000000000000000000000000000000001418 142.0
MMS3_k127_2424732_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1173.0
MMS3_k127_2424732_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1111.0
MMS3_k127_2424732_10 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 599.0
MMS3_k127_2424732_11 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 589.0
MMS3_k127_2424732_12 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 586.0
MMS3_k127_2424732_13 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 579.0
MMS3_k127_2424732_14 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes K03800 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0017118,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 496.0
MMS3_k127_2424732_15 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 472.0
MMS3_k127_2424732_16 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 460.0
MMS3_k127_2424732_17 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 368.0
MMS3_k127_2424732_18 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 364.0
MMS3_k127_2424732_19 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 356.0
MMS3_k127_2424732_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 4.6e-322 1006.0
MMS3_k127_2424732_20 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 GO:0000271,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009628,GO:0009987,GO:0016051,GO:0030288,GO:0030313,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042597,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0050896,GO:0051273,GO:0051274,GO:0071704,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 355.0
MMS3_k127_2424732_21 response regulator receiver K02483,K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
MMS3_k127_2424732_22 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005067 271.0
MMS3_k127_2424732_23 glycine cleavage K02437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005751 271.0
MMS3_k127_2424732_24 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001302 275.0
MMS3_k127_2424732_25 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001705 273.0
MMS3_k127_2424732_26 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002631 250.0
MMS3_k127_2424732_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003854 249.0
MMS3_k127_2424732_28 DsrE/DsrF-like family K07092 - - 0.000000000000000000000000000000000000000000000000000000000000000001579 228.0
MMS3_k127_2424732_29 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000005551 219.0
MMS3_k127_2424732_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 1.35e-311 966.0
MMS3_k127_2424732_30 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000001245 214.0
MMS3_k127_2424732_31 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000001408 221.0
MMS3_k127_2424732_32 Autotransporter beta-domain - - - 0.0000000000000000000000000000000000000000000000000001018 204.0
MMS3_k127_2424732_33 Ribosomal RNA adenine dimethylase - - - 0.0000000000000000000000000000000000000000000000001318 183.0
MMS3_k127_2424732_34 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000003037 179.0
MMS3_k127_2424732_35 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000004217 171.0
MMS3_k127_2424732_36 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000003679 157.0
MMS3_k127_2424732_37 PFAM Rhodanese-like - - - 0.00000000000000000000000000000000872 130.0
MMS3_k127_2424732_38 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000001054 137.0
MMS3_k127_2424732_39 Cytochrome c K17223 - - 0.000000000000000000000000000001986 124.0
MMS3_k127_2424732_4 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.965e-288 886.0
MMS3_k127_2424732_40 - - - - 0.000000000000000000000000000005124 125.0
MMS3_k127_2424732_41 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000001885 120.0
MMS3_k127_2424732_42 Modulates RecA activity K03565 - - 0.00000000000000000000000001367 115.0
MMS3_k127_2424732_43 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000264 113.0
MMS3_k127_2424732_44 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0008452,GO:0008664,GO:0016787,GO:0016788,GO:0016874,GO:0016886,GO:0042578,GO:0140098 3.1.4.58 0.0000000000000000000000168 109.0
MMS3_k127_2424732_45 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005979,GO:0006109,GO:0006139,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010675,GO:0010677,GO:0010906,GO:0010962,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032881,GO:0032885,GO:0034248,GO:0034249,GO:0034641,GO:0043170,GO:0043255,GO:0043467,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045719,GO:0045912,GO:0045947,GO:0046483,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0065007,GO:0070873,GO:0070874,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.000000000000000000002802 98.0
MMS3_k127_2424732_46 Putative zinc-finger - - - 0.000000000000000000005314 100.0
MMS3_k127_2424732_5 Radical SAM K01012 - 2.8.1.6 1.346e-231 719.0
MMS3_k127_2424732_6 Glycosyl transferase family 21 K03669 - - 6.786e-219 698.0
MMS3_k127_2424732_7 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 7.072e-211 657.0
MMS3_k127_2424732_8 PFAM Ammonium Transporter K03320 - - 1.135e-203 639.0
MMS3_k127_2424732_9 SMART Elongator protein 3 MiaB NifB K09711 - - 1.008e-200 630.0
MMS3_k127_2472_0 leucine binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 326.0
MMS3_k127_2472_1 Nacht domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005575 311.0
MMS3_k127_2472_2 Putative transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000009137 223.0
MMS3_k127_2472_3 Lipase (class 3) K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000006731 205.0
MMS3_k127_2472_4 Plasmid segregation protein ParM K18640 - - 0.00000000000000287 84.0
MMS3_k127_2512004_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1080.0
MMS3_k127_2512004_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1007.0
MMS3_k127_2512004_10 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 506.0
MMS3_k127_2512004_11 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 489.0
MMS3_k127_2512004_12 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 489.0
MMS3_k127_2512004_13 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 473.0
MMS3_k127_2512004_14 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 466.0
MMS3_k127_2512004_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 419.0
MMS3_k127_2512004_16 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 410.0
MMS3_k127_2512004_17 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007025 406.0
MMS3_k127_2512004_18 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 403.0
MMS3_k127_2512004_19 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 400.0
MMS3_k127_2512004_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.57e-311 960.0
MMS3_k127_2512004_20 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 398.0
MMS3_k127_2512004_21 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 393.0
MMS3_k127_2512004_22 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 390.0
MMS3_k127_2512004_23 lysine 2,3-aminomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 392.0
MMS3_k127_2512004_24 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 387.0
MMS3_k127_2512004_25 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 389.0
MMS3_k127_2512004_26 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 381.0
MMS3_k127_2512004_27 Organic Anion Transporter Polypeptide (OATP) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 379.0
MMS3_k127_2512004_28 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 348.0
MMS3_k127_2512004_29 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 351.0
MMS3_k127_2512004_3 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 7.479e-266 834.0
MMS3_k127_2512004_30 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 342.0
MMS3_k127_2512004_31 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 327.0
MMS3_k127_2512004_32 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 326.0
MMS3_k127_2512004_33 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 325.0
MMS3_k127_2512004_34 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 322.0
MMS3_k127_2512004_35 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 327.0
MMS3_k127_2512004_36 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 321.0
MMS3_k127_2512004_37 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 316.0
MMS3_k127_2512004_38 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 296.0
MMS3_k127_2512004_39 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 297.0
MMS3_k127_2512004_4 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.578e-242 763.0
MMS3_k127_2512004_40 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 304.0
MMS3_k127_2512004_41 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 289.0
MMS3_k127_2512004_42 (ABC) transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003529 278.0
MMS3_k127_2512004_43 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003404 273.0
MMS3_k127_2512004_44 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003075 261.0
MMS3_k127_2512004_45 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001397 276.0
MMS3_k127_2512004_46 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001104 255.0
MMS3_k127_2512004_47 PFAM Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005781 258.0
MMS3_k127_2512004_48 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001631 254.0
MMS3_k127_2512004_49 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009716 246.0
MMS3_k127_2512004_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.4.3.16 2.112e-220 697.0
MMS3_k127_2512004_50 copper resistance K07245,K14166 - - 0.00000000000000000000000000000000000000000000000000000000000000000004683 243.0
MMS3_k127_2512004_51 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000003568 234.0
MMS3_k127_2512004_52 Glycosyltransferase 28 domain - - - 0.00000000000000000000000000000000000000000000000000000000000003853 227.0
MMS3_k127_2512004_53 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000003476 219.0
MMS3_k127_2512004_54 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000297 208.0
MMS3_k127_2512004_55 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000008189 202.0
MMS3_k127_2512004_56 Domain of unknown function (DUF929) - - - 0.00000000000000000000000000000000000000000005164 170.0
MMS3_k127_2512004_57 PFAM MucB RseB K03598 - - 0.0000000000000000000000000000000000000000002679 171.0
MMS3_k127_2512004_58 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000007703 163.0
MMS3_k127_2512004_59 Resolvase - - - 0.00000000000000000000000000000000000000015 151.0
MMS3_k127_2512004_6 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 1.592e-211 664.0
MMS3_k127_2512004_60 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000004266 150.0
MMS3_k127_2512004_61 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000000000006602 155.0
MMS3_k127_2512004_62 TIGRFAM Hopanoid-associated phosphorylase K01243 - 3.2.2.9 0.00000000000000000000000000000000001744 145.0
MMS3_k127_2512004_63 GtrA-like protein - - - 0.000000000000000000000000000000001244 134.0
MMS3_k127_2512004_64 Host attachment protein - - - 0.000000000000000000000000000000001893 134.0
MMS3_k127_2512004_65 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000006512 132.0
MMS3_k127_2512004_66 Probable transposase - - - 0.0000000000000000000000000001647 114.0
MMS3_k127_2512004_67 Protein of unknown function (DUF1641) - - - 0.0000000000000000000000000001963 125.0
MMS3_k127_2512004_68 Glutaredoxin-like domain (DUF836) - - - 0.0000000000000000000000008518 105.0
MMS3_k127_2512004_69 PFAM Anti sigma-E protein RseA K03597 - - 0.0000000000000000000006048 103.0
MMS3_k127_2512004_7 PFAM EAL domain K21025 - - 1.304e-210 674.0
MMS3_k127_2512004_70 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000001535 102.0
MMS3_k127_2512004_72 Domain of unknown function (DUF4845) - - - 0.0000000001107 68.0
MMS3_k127_2512004_73 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000001528 55.0
MMS3_k127_2512004_8 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 2.157e-205 646.0
MMS3_k127_2512004_9 Domain of unknown function (DUF3463) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 578.0
MMS3_k127_2786680_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1643.0
MMS3_k127_2786680_1 Type I restriction-modification system methyltransferase subunit K03427 - 2.1.1.72 0.0 1377.0
MMS3_k127_2786680_10 PFAM Integrase catalytic region - - - 4.181e-230 721.0
MMS3_k127_2786680_11 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 4.17e-210 661.0
MMS3_k127_2786680_12 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 563.0
MMS3_k127_2786680_13 dCMP deaminase activity K01489,K01493 - 3.5.4.12,3.5.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 558.0
MMS3_k127_2786680_14 COG0732 Restriction endonuclease S subunits K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 519.0
MMS3_k127_2786680_15 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 496.0
MMS3_k127_2786680_16 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 431.0
MMS3_k127_2786680_17 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 427.0
MMS3_k127_2786680_18 N-6 DNA Methylase K03427 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 418.0
MMS3_k127_2786680_19 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 397.0
MMS3_k127_2786680_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1163.0
MMS3_k127_2786680_20 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 401.0
MMS3_k127_2786680_21 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 364.0
MMS3_k127_2786680_22 helix-turn-helix domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 346.0
MMS3_k127_2786680_23 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 333.0
MMS3_k127_2786680_24 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 309.0
MMS3_k127_2786680_25 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 306.0
MMS3_k127_2786680_26 Tn7-like transposition protein D - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000302 293.0
MMS3_k127_2786680_27 Transposase K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000251 260.0
MMS3_k127_2786680_28 Phosphoesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004561 274.0
MMS3_k127_2786680_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001462 252.0
MMS3_k127_2786680_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.482e-288 892.0
MMS3_k127_2786680_30 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001415 233.0
MMS3_k127_2786680_31 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000003459 225.0
MMS3_k127_2786680_32 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000002128 209.0
MMS3_k127_2786680_33 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000002882 170.0
MMS3_k127_2786680_34 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000001089 167.0
MMS3_k127_2786680_35 Belongs to the peptidase S16 family - - - 0.00000000000000000000000000000000000000000002893 179.0
MMS3_k127_2786680_36 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - - - 0.0000000000000000000000000000000000000000008309 162.0
MMS3_k127_2786680_37 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000001152 157.0
MMS3_k127_2786680_38 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000003408 152.0
MMS3_k127_2786680_39 TIGRFAM transposase, IS605 OrfB family - - - 0.000000000000000000000000000000000001255 139.0
MMS3_k127_2786680_4 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 3.328e-275 851.0
MMS3_k127_2786680_41 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000001628 118.0
MMS3_k127_2786680_42 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000002229 103.0
MMS3_k127_2786680_43 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000001225 97.0
MMS3_k127_2786680_44 - - - - 0.00000000000000000002071 92.0
MMS3_k127_2786680_46 ATP synthase I chain K02116 - - 0.00000000000000000003531 94.0
MMS3_k127_2786680_47 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000004616 76.0
MMS3_k127_2786680_48 - - - - 0.00000000000004535 75.0
MMS3_k127_2786680_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.568e-271 840.0
MMS3_k127_2786680_50 Helix-turn-helix domain - - - 0.000000000002998 73.0
MMS3_k127_2786680_51 energy transducer activity K03646,K03832 - - 0.0000000007374 69.0
MMS3_k127_2786680_52 Tn7-like transposition protein D - - - 0.0000000154 66.0
MMS3_k127_2786680_53 - - - - 0.00000005633 63.0
MMS3_k127_2786680_6 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.349e-268 839.0
MMS3_k127_2786680_7 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009987,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 7.524e-250 784.0
MMS3_k127_2786680_8 peptidase K01414 - 3.4.24.70 1.655e-246 778.0
MMS3_k127_2786680_9 Transposase DDE domain - - - 1.969e-234 733.0
MMS3_k127_2800994_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 520.0
MMS3_k127_2800994_1 ABC transporter substrate-binding protein K10236 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 389.0
MMS3_k127_2800994_10 COG0826 Collagenase and related proteases K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000004658 102.0
MMS3_k127_2800994_2 DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 342.0
MMS3_k127_2800994_3 ABC-type sugar transport system, permease component K02026,K10238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 322.0
MMS3_k127_2800994_4 Belongs to the ABC transporter superfamily K10111,K10191 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 326.0
MMS3_k127_2800994_5 (ABC) transporter, permease K10237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 310.0
MMS3_k127_2800994_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 294.0
MMS3_k127_2800994_7 protein transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002875 252.0
MMS3_k127_2800994_8 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000001129 173.0
MMS3_k127_2800994_9 transcriptional regulator, luxR family - - - 0.0000000000000000000000000000006882 125.0
MMS3_k127_2914234_0 PFAM Integrase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 563.0
MMS3_k127_2914234_1 SMART ATP-binding region, ATPase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 479.0
MMS3_k127_2914234_2 PFAM Integrase catalytic region K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 340.0
MMS3_k127_2914234_3 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004062 243.0
MMS3_k127_2914234_4 Transposase K07497 - - 0.0000000000000000000000000000000000008465 140.0
MMS3_k127_2914234_5 COG1943 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000002696 135.0
MMS3_k127_2915631_0 Probable transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 553.0
MMS3_k127_2915631_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 377.0
MMS3_k127_2915631_10 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate - - - 0.00000000000000000000000000000000000000000000000001013 191.0
MMS3_k127_2915631_11 Conserved Protein - - - 0.00000000000000000000000000000000000000000000000001276 190.0
MMS3_k127_2915631_12 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000004154 191.0
MMS3_k127_2915631_13 Acid phosphatase homologues - - - 0.00000000000000000000000000000000000000000000000004889 187.0
MMS3_k127_2915631_14 - - - - 0.000000000000000000000000000000000000000000003764 167.0
MMS3_k127_2915631_15 Domain of unknown function (DUF4156) - - - 0.00000000000001539 78.0
MMS3_k127_2915631_16 - - - - 0.000000000005566 67.0
MMS3_k127_2915631_17 - - - - 0.00000000009884 70.0
MMS3_k127_2915631_19 - - - - 0.0001603 46.0
MMS3_k127_2915631_2 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 370.0
MMS3_k127_2915631_3 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 364.0
MMS3_k127_2915631_4 Aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 355.0
MMS3_k127_2915631_5 iron assimilation K07223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 331.0
MMS3_k127_2915631_6 PFAM Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 321.0
MMS3_k127_2915631_7 PFAM Response regulator receiver domain K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 309.0
MMS3_k127_2915631_8 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 293.0
MMS3_k127_2915631_9 GPR1/FUN34/yaaH family K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003793 266.0
MMS3_k127_2915789_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1021.0
MMS3_k127_2915789_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.306e-204 657.0
MMS3_k127_2915789_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 330.0
MMS3_k127_2915789_11 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 291.0
MMS3_k127_2915789_12 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 288.0
MMS3_k127_2915789_13 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004895 278.0
MMS3_k127_2915789_14 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000002874 262.0
MMS3_k127_2915789_15 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000000000004371 248.0
MMS3_k127_2915789_16 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000008776 241.0
MMS3_k127_2915789_17 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000005141 235.0
MMS3_k127_2915789_18 - - - - 0.00000000000000000000000000000000000000000000000000000000003884 212.0
MMS3_k127_2915789_19 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.000000000000000000000000000000000000000000000000000000002074 207.0
MMS3_k127_2915789_2 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 524.0
MMS3_k127_2915789_20 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000001437 195.0
MMS3_k127_2915789_21 Pfam Rhodanese-like - - - 0.000000000000000000000000000000000000000000000000000003387 194.0
MMS3_k127_2915789_22 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000009308 194.0
MMS3_k127_2915789_23 - - - - 0.0000000000000000000000001324 109.0
MMS3_k127_2915789_24 Zeta toxin - - - 0.00000000000000000000003002 111.0
MMS3_k127_2915789_25 Protein of unknown function (DUF3301) - - - 0.0000000000000000006593 92.0
MMS3_k127_2915789_26 Probable transposase - - - 0.0000000000000000403 82.0
MMS3_k127_2915789_3 Glutathione S-Transferase K07393 - 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 469.0
MMS3_k127_2915789_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 462.0
MMS3_k127_2915789_5 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 456.0
MMS3_k127_2915789_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 383.0
MMS3_k127_2915789_7 Glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 361.0
MMS3_k127_2915789_8 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 351.0
MMS3_k127_2915789_9 Methyltransferase K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 344.0
MMS3_k127_3016362_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase - - - 0.0 1181.0
MMS3_k127_3016362_1 COG0147 Anthranilate para-aminobenzoate synthases component I K01665,K03342 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.38 6.091e-214 681.0
MMS3_k127_3016362_2 kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 598.0
MMS3_k127_3016362_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 591.0
MMS3_k127_3016362_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 466.0
MMS3_k127_3016362_5 Transcriptional regulator K13641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 297.0
MMS3_k127_3016362_6 Probable transposase - - - 0.00000000000000000000000000000000000000000000000000000007174 196.0
MMS3_k127_3067086_0 Nacht domain - - - 0.0 1664.0
MMS3_k127_3067086_1 SIR2-like domain - - - 0.0 1316.0
MMS3_k127_3067086_2 Mu transposase, C-terminal K07497 - - 2.892e-299 941.0
MMS3_k127_3067086_3 Bacterial TniB protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 398.0
MMS3_k127_3067086_4 TniQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 347.0
MMS3_k127_3067086_5 - - - - 0.0000000000000000000000000000000000000000000000000000002829 204.0
MMS3_k127_3067086_6 - - - - 0.000000000000000000000000000000000000000000000003822 185.0
MMS3_k127_3067086_7 Helix-turn-helix domain - - - 0.00000000000000000000000000006312 119.0
MMS3_k127_3067086_8 - - - - 0.0000000000000000000002405 99.0
MMS3_k127_3067086_9 - - - - 0.0003641 43.0
MMS3_k127_3210257_0 SNF2 family N-terminal domain K03580 - - 0.0 1994.0
MMS3_k127_3210257_1 Protein of unknown function (DUF499) K06922 - - 0.0 1767.0
MMS3_k127_3210257_10 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.448e-249 788.0
MMS3_k127_3210257_100 Sporulation related domain - - - 0.000000000000000000000000004256 118.0
MMS3_k127_3210257_102 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000001049 115.0
MMS3_k127_3210257_103 RloB-like protein - - - 0.0000000000000000000000001064 114.0
MMS3_k127_3210257_104 sulfur carrier activity K04085 - - 0.000000000000000000000008057 103.0
MMS3_k127_3210257_105 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000003254 103.0
MMS3_k127_3210257_106 Domain of unknown function (DUF4124) - - - 0.00000000000000000000007969 106.0
MMS3_k127_3210257_107 Outer membrane lipoprotein carrier protein LolA - - - 0.0000000000000000000005831 104.0
MMS3_k127_3210257_108 amine dehydrogenase activity - - - 0.00000000000000001382 94.0
MMS3_k127_3210257_109 Phage integrase family - - - 0.0000000000000008905 78.0
MMS3_k127_3210257_11 FAD linked oxidase K00104 - 1.1.3.15 1.51e-239 748.0
MMS3_k127_3210257_110 - - - - 0.00000000000004272 76.0
MMS3_k127_3210257_111 nuclear chromosome segregation - - - 0.000000000001035 76.0
MMS3_k127_3210257_112 FabA-like domain - - - 0.000000000001423 71.0
MMS3_k127_3210257_113 PFAM Integrase catalytic - - - 0.0000000007944 60.0
MMS3_k127_3210257_114 Plasmid replication region DNA-binding N-term - - - 0.00000001657 64.0
MMS3_k127_3210257_115 HTH-like domain K07497 - - 0.0000001536 53.0
MMS3_k127_3210257_116 - - - - 0.0000004838 58.0
MMS3_k127_3210257_117 Integrase core domain K07497 - - 0.000002842 56.0
MMS3_k127_3210257_118 - - - - 0.0001754 45.0
MMS3_k127_3210257_119 Protein of unknown function (DUF3579) - - - 0.0002451 48.0
MMS3_k127_3210257_12 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 4.501e-227 724.0
MMS3_k127_3210257_13 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.857e-217 689.0
MMS3_k127_3210257_14 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.226e-204 648.0
MMS3_k127_3210257_15 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 1.141e-200 637.0
MMS3_k127_3210257_16 Protein of unknown function (DUF3732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 611.0
MMS3_k127_3210257_17 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 586.0
MMS3_k127_3210257_18 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 571.0
MMS3_k127_3210257_19 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 577.0
MMS3_k127_3210257_2 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1451.0
MMS3_k127_3210257_20 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 554.0
MMS3_k127_3210257_21 Thiamine biosynthesis protein (ThiI) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 540.0
MMS3_k127_3210257_22 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 538.0
MMS3_k127_3210257_23 TIGRFAM carboxysome shell carbonic anhydrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 546.0
MMS3_k127_3210257_24 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 533.0
MMS3_k127_3210257_25 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 539.0
MMS3_k127_3210257_26 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007074 511.0
MMS3_k127_3210257_27 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 514.0
MMS3_k127_3210257_28 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 506.0
MMS3_k127_3210257_29 oxidoreductases (related to aryl-alcohol dehydrogenases) - GO:0003674,GO:0003824,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016491,GO:0016614,GO:0016616,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:1990928 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 502.0
MMS3_k127_3210257_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1335.0
MMS3_k127_3210257_30 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 496.0
MMS3_k127_3210257_31 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 495.0
MMS3_k127_3210257_32 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 493.0
MMS3_k127_3210257_33 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 486.0
MMS3_k127_3210257_34 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 489.0
MMS3_k127_3210257_35 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 467.0
MMS3_k127_3210257_36 oxidoreductase K14257 - 1.14.19.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 456.0
MMS3_k127_3210257_37 Carboxysome shell peptide mid-region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 457.0
MMS3_k127_3210257_38 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 434.0
MMS3_k127_3210257_39 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 423.0
MMS3_k127_3210257_4 DNA methylAse K07445 - - 0.0 1327.0
MMS3_k127_3210257_40 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 417.0
MMS3_k127_3210257_41 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 412.0
MMS3_k127_3210257_42 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 408.0
MMS3_k127_3210257_43 PFAM FAD linked oxidase domain protein K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 398.0
MMS3_k127_3210257_44 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 389.0
MMS3_k127_3210257_45 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 371.0
MMS3_k127_3210257_46 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 368.0
MMS3_k127_3210257_47 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 356.0
MMS3_k127_3210257_48 BMC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 347.0
MMS3_k127_3210257_49 AAA domain, putative AbiEii toxin, Type IV TA system K06926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 359.0
MMS3_k127_3210257_5 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 4.842e-296 912.0
MMS3_k127_3210257_50 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 357.0
MMS3_k127_3210257_51 Bacterial lipid A biosynthesis acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 343.0
MMS3_k127_3210257_52 Belongs to the ribF family K11753 GO:0003674,GO:0003824,GO:0003919,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008531,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0044237,GO:0070566 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 339.0
MMS3_k127_3210257_53 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 344.0
MMS3_k127_3210257_54 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 336.0
MMS3_k127_3210257_55 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 330.0
MMS3_k127_3210257_56 Hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 317.0
MMS3_k127_3210257_57 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 293.0
MMS3_k127_3210257_58 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 288.0
MMS3_k127_3210257_59 PFAM UBA THIF-type NAD FAD binding K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003294 284.0
MMS3_k127_3210257_6 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.634e-273 851.0
MMS3_k127_3210257_60 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005107 284.0
MMS3_k127_3210257_61 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004379 278.0
MMS3_k127_3210257_62 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000001759 265.0
MMS3_k127_3210257_63 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005711 264.0
MMS3_k127_3210257_64 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004217 274.0
MMS3_k127_3210257_65 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000124 268.0
MMS3_k127_3210257_66 peptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002854 267.0
MMS3_k127_3210257_67 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000005989 248.0
MMS3_k127_3210257_68 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000493 242.0
MMS3_k127_3210257_69 MltA-interacting protein MipA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000257 244.0
MMS3_k127_3210257_7 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.724e-262 814.0
MMS3_k127_3210257_70 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008731 229.0
MMS3_k127_3210257_71 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000005632 231.0
MMS3_k127_3210257_72 Fic/DOC family K04095 - - 0.00000000000000000000000000000000000000000000000000000000000001714 223.0
MMS3_k127_3210257_73 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000002987 220.0
MMS3_k127_3210257_74 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000001729 213.0
MMS3_k127_3210257_75 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000003624 215.0
MMS3_k127_3210257_76 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000001008 205.0
MMS3_k127_3210257_77 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000001448 201.0
MMS3_k127_3210257_78 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000001653 200.0
MMS3_k127_3210257_79 Putative transmembrane protein (Alph_Pro_TM) - - - 0.00000000000000000000000000000000000000000000000007293 189.0
MMS3_k127_3210257_8 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.744e-257 804.0
MMS3_k127_3210257_80 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000001538 181.0
MMS3_k127_3210257_81 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000002991 166.0
MMS3_k127_3210257_82 - - - - 0.0000000000000000000000000000000000000000001618 169.0
MMS3_k127_3210257_83 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml - - - 0.000000000000000000000000000000000000000001855 157.0
MMS3_k127_3210257_84 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000003885 154.0
MMS3_k127_3210257_85 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000005379 153.0
MMS3_k127_3210257_86 - - - - 0.000000000000000000000000000000000000007459 153.0
MMS3_k127_3210257_87 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000000000000001059 146.0
MMS3_k127_3210257_88 - - - - 0.0000000000000000000000000000000000000312 154.0
MMS3_k127_3210257_89 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000001123 146.0
MMS3_k127_3210257_9 Heavy metal translocating P-type atpase - - - 3.651e-252 799.0
MMS3_k127_3210257_90 - - - - 0.0000000000000000000000000000000000001505 150.0
MMS3_k127_3210257_91 MazG-like family - - - 0.00000000000000000000000000000000000371 144.0
MMS3_k127_3210257_92 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000001574 140.0
MMS3_k127_3210257_93 dehydratase - - - 0.0000000000000000000000000000000707 131.0
MMS3_k127_3210257_94 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000000001391 125.0
MMS3_k127_3210257_95 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000000000000000000000000002566 125.0
MMS3_k127_3210257_96 - - - - 0.000000000000000000000000000001096 128.0
MMS3_k127_3210257_97 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000001836 122.0
MMS3_k127_3210257_98 carboxysome shell protein - - - 0.000000000000000000000000000386 115.0
MMS3_k127_3210257_99 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000001205 115.0
MMS3_k127_3284212_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 294.0
MMS3_k127_3284212_2 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.00000000000000000000000000000001558 130.0
MMS3_k127_3284212_3 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.00000000000008456 72.0
MMS3_k127_3309938_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1224.0
MMS3_k127_3309938_1 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 515.0
MMS3_k127_3309938_2 Transcriptional regulator K03576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 467.0
MMS3_k127_3309938_3 Thioesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 293.0
MMS3_k127_3309938_4 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002952 280.0
MMS3_k127_3309938_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003874 280.0
MMS3_k127_3309938_6 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000000002665 217.0
MMS3_k127_3309938_7 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000003877 197.0
MMS3_k127_3309938_8 glycosylase K01246 - 3.2.2.20 0.0001193 46.0
MMS3_k127_3309938_9 COG3666 Transposase and inactivated derivatives - - - 0.0003267 46.0
MMS3_k127_3405338_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1339.0
MMS3_k127_3405338_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1073.0
MMS3_k127_3405338_10 PFAM Aminotransferase class-III K01845 - 5.4.3.8 2.354e-214 672.0
MMS3_k127_3405338_11 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 4.921e-213 672.0
MMS3_k127_3405338_12 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.463e-209 656.0
MMS3_k127_3405338_13 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 1.885e-205 650.0
MMS3_k127_3405338_14 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 1.422e-196 621.0
MMS3_k127_3405338_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.336e-195 620.0
MMS3_k127_3405338_16 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 605.0
MMS3_k127_3405338_17 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 533.0
MMS3_k127_3405338_18 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 522.0
MMS3_k127_3405338_19 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 511.0
MMS3_k127_3405338_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1009.0
MMS3_k127_3405338_20 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 514.0
MMS3_k127_3405338_21 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 503.0
MMS3_k127_3405338_22 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 487.0
MMS3_k127_3405338_23 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 477.0
MMS3_k127_3405338_24 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 466.0
MMS3_k127_3405338_25 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 473.0
MMS3_k127_3405338_26 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 438.0
MMS3_k127_3405338_27 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 422.0
MMS3_k127_3405338_28 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 415.0
MMS3_k127_3405338_29 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 407.0
MMS3_k127_3405338_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.775e-304 943.0
MMS3_k127_3405338_30 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 376.0
MMS3_k127_3405338_31 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 374.0
MMS3_k127_3405338_32 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 353.0
MMS3_k127_3405338_33 PFAM LppC K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 373.0
MMS3_k127_3405338_34 Belongs to the NadC ModD family K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 353.0
MMS3_k127_3405338_35 PFAM Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007767 355.0
MMS3_k127_3405338_36 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 347.0
MMS3_k127_3405338_37 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 347.0
MMS3_k127_3405338_38 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 351.0
MMS3_k127_3405338_39 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 334.0
MMS3_k127_3405338_4 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 2.996e-300 940.0
MMS3_k127_3405338_40 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 334.0
MMS3_k127_3405338_41 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 328.0
MMS3_k127_3405338_42 NGG1p interacting factor 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 323.0
MMS3_k127_3405338_43 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 323.0
MMS3_k127_3405338_44 Nad-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 324.0
MMS3_k127_3405338_45 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 308.0
MMS3_k127_3405338_46 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 294.0
MMS3_k127_3405338_47 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001356 280.0
MMS3_k127_3405338_48 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003155 273.0
MMS3_k127_3405338_49 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001136 269.0
MMS3_k127_3405338_5 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.445e-297 919.0
MMS3_k127_3405338_50 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004804 267.0
MMS3_k127_3405338_51 Stringent starvation protein A K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001218 265.0
MMS3_k127_3405338_52 PFAM HhH-GPD K07457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000097 257.0
MMS3_k127_3405338_53 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000001006 255.0
MMS3_k127_3405338_54 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004524 245.0
MMS3_k127_3405338_55 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000004338 238.0
MMS3_k127_3405338_56 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000036 219.0
MMS3_k127_3405338_57 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000007662 218.0
MMS3_k127_3405338_58 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000002272 209.0
MMS3_k127_3405338_59 PFAM regulatory protein, MerR - - - 0.000000000000000000000000000000000000000000000000000003738 192.0
MMS3_k127_3405338_6 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 7.222e-270 858.0
MMS3_k127_3405338_60 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000000000000000000000000000000000000000001144 180.0
MMS3_k127_3405338_61 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000002847 174.0
MMS3_k127_3405338_62 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000001462 168.0
MMS3_k127_3405338_63 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000000000000000005515 165.0
MMS3_k127_3405338_64 - - - - 0.000000000000000000000000000000000000000000007698 168.0
MMS3_k127_3405338_65 Glutathione peroxidase - - - 0.00000000000000000000000000000000000000000007596 166.0
MMS3_k127_3405338_66 Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000000002178 162.0
MMS3_k127_3405338_67 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000004493 156.0
MMS3_k127_3405338_68 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000008333 153.0
MMS3_k127_3405338_69 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000004195 153.0
MMS3_k127_3405338_7 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 1.643e-269 852.0
MMS3_k127_3405338_70 PFAM toluene tolerance K07323 - - 0.00000000000000000000000000000000003785 142.0
MMS3_k127_3405338_71 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000004398 135.0
MMS3_k127_3405338_72 - - - - 0.00000000000000000000000000000008603 128.0
MMS3_k127_3405338_73 COG1925 Phosphotransferase system, HPr-related proteins K08485,K11189 GO:0003674,GO:0003824,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006808,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009987,GO:0010033,GO:0010243,GO:0016310,GO:0016740,GO:0016772,GO:0019538,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0065007,GO:0071702,GO:0071704,GO:1901564,GO:1901698 - 0.000000000000000000000000000499 115.0
MMS3_k127_3405338_74 Bacterial SH3 domain homologues K07184 - - 0.000000000000000000000000003501 121.0
MMS3_k127_3405338_75 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.000000000000000000000000003709 111.0
MMS3_k127_3405338_76 pilin assembly protein - - - 0.00000000000000000000000001857 113.0
MMS3_k127_3405338_77 Prokaryotic diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.000000000000000000000005542 105.0
MMS3_k127_3405338_78 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000001576 98.0
MMS3_k127_3405338_79 - - - - 0.00000000000000000000265 97.0
MMS3_k127_3405338_8 Putative diguanylate phosphodiesterase - - - 9.888e-235 745.0
MMS3_k127_3405338_80 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.0000000000000000005895 94.0
MMS3_k127_3405338_81 Lipopolysaccharide assembly protein A domain K08992 - - 0.00000000000001046 77.0
MMS3_k127_3405338_82 NTP binding protein (Contains STAS domain) K07122 - - 0.00000000000001927 77.0
MMS3_k127_3405338_83 leucine-zipper of insertion element IS481 - - - 0.000000000002127 71.0
MMS3_k127_3405338_84 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000002618 61.0
MMS3_k127_3405338_85 Protein of unknown function DUF72 - - - 0.000000001789 66.0
MMS3_k127_3405338_86 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA K11719 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.00009516 52.0
MMS3_k127_3405338_87 Transposase IS200 like K07491 - - 0.0001919 44.0
MMS3_k127_3405338_9 PFAM ABC transporter K06158 - - 1.164e-217 693.0
MMS3_k127_3448988_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1345.0
MMS3_k127_3448988_1 Belongs to the ClpA ClpB family K03694 - - 0.0 1188.0
MMS3_k127_3448988_10 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 389.0
MMS3_k127_3448988_11 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 387.0
MMS3_k127_3448988_12 PFAM Transglutaminase-like K22452 - 2.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 397.0
MMS3_k127_3448988_13 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 381.0
MMS3_k127_3448988_14 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 370.0
MMS3_k127_3448988_15 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 357.0
MMS3_k127_3448988_16 reductase K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 321.0
MMS3_k127_3448988_17 PFAM Resolvase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 300.0
MMS3_k127_3448988_18 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001038 289.0
MMS3_k127_3448988_19 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000001958 239.0
MMS3_k127_3448988_2 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 2.457e-207 653.0
MMS3_k127_3448988_20 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000005326 223.0
MMS3_k127_3448988_21 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000000000000022 216.0
MMS3_k127_3448988_22 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000003231 221.0
MMS3_k127_3448988_23 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000006803 172.0
MMS3_k127_3448988_24 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000000000001596 168.0
MMS3_k127_3448988_25 PFAM Type IV pilus assembly PilZ K02676 - - 0.0000000000000000000000000000000000000000001005 162.0
MMS3_k127_3448988_26 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000008363 136.0
MMS3_k127_3448988_27 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000002978 136.0
MMS3_k127_3448988_28 Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins K22068 GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031974,GO:0034470,GO:0034641,GO:0034660,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0046483,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097428,GO:0098771,GO:1901360,GO:1901564 - 0.000000001429 59.0
MMS3_k127_3448988_29 - - - - 0.00003664 51.0
MMS3_k127_3448988_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.427e-205 647.0
MMS3_k127_3448988_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.395e-201 634.0
MMS3_k127_3448988_5 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008545 563.0
MMS3_k127_3448988_6 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 469.0
MMS3_k127_3448988_7 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 461.0
MMS3_k127_3448988_8 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 423.0
MMS3_k127_3448988_9 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 397.0
MMS3_k127_3470523_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.35e-218 686.0
MMS3_k127_3470523_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.279e-216 678.0
MMS3_k127_3470523_10 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000009525 222.0
MMS3_k127_3470523_11 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.7.7.77 0.00000000000000000000000000000000000000000000000000002187 195.0
MMS3_k127_3470523_12 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000009338 175.0
MMS3_k127_3470523_13 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000155 161.0
MMS3_k127_3470523_14 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.00000000000000000000000000000000007768 144.0
MMS3_k127_3470523_15 Sulfotransferase domain K13472 - - 0.00000000000000000000000000001302 130.0
MMS3_k127_3470523_16 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000002423 124.0
MMS3_k127_3470523_17 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000008682 113.0
MMS3_k127_3470523_18 - - - - 0.000000000003439 76.0
MMS3_k127_3470523_19 PFAM Integrase catalytic - - - 0.00000000006576 63.0
MMS3_k127_3470523_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 522.0
MMS3_k127_3470523_20 PFAM Integrase core domain - - - 0.0000000004449 60.0
MMS3_k127_3470523_21 - - - - 0.000000001432 63.0
MMS3_k127_3470523_22 - - - - 0.000000002845 59.0
MMS3_k127_3470523_23 - - - - 0.0000001273 55.0
MMS3_k127_3470523_24 - - - - 0.00000027 51.0
MMS3_k127_3470523_26 pathogenesis - - - 0.0001618 54.0
MMS3_k127_3470523_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 451.0
MMS3_k127_3470523_4 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 363.0
MMS3_k127_3470523_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 345.0
MMS3_k127_3470523_6 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002401 270.0
MMS3_k127_3470523_7 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000681 237.0
MMS3_k127_3470523_8 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000002613 232.0
MMS3_k127_3470523_9 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000001149 230.0
MMS3_k127_3490960_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2142.0
MMS3_k127_3490960_1 SIR2-like domain - - - 0.0 1814.0
MMS3_k127_3490960_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 4.652e-244 768.0
MMS3_k127_3490960_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 574.0
MMS3_k127_3490960_4 Hypothetical protein (DUF2513) - - - 0.0000000000000000000000000000000000000001153 154.0
MMS3_k127_3490960_5 - - - - 0.00001876 55.0
MMS3_k127_3577422_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.425e-207 652.0
MMS3_k127_3577422_1 PFAM malic K00029 - 1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 581.0
MMS3_k127_3577422_10 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
MMS3_k127_3577422_11 Molybdenum cofactor biosynthesis protein MoaE K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000002442 185.0
MMS3_k127_3577422_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000002444 185.0
MMS3_k127_3577422_13 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000008173 151.0
MMS3_k127_3577422_14 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000000000003882 123.0
MMS3_k127_3577422_15 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000155 115.0
MMS3_k127_3577422_16 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000008899 95.0
MMS3_k127_3577422_17 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000008608 94.0
MMS3_k127_3577422_18 low molecular weight K03741 - 1.20.4.1 0.000000000000003028 81.0
MMS3_k127_3577422_19 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0000000000001918 73.0
MMS3_k127_3577422_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 490.0
MMS3_k127_3577422_20 Belongs to the 'phage' integrase family - - - 0.000000000002813 79.0
MMS3_k127_3577422_3 heat shock protein DnaJ K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 400.0
MMS3_k127_3577422_4 COG1194 A G-specific DNA glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 389.0
MMS3_k127_3577422_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 370.0
MMS3_k127_3577422_6 5'-3' exonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 312.0
MMS3_k127_3577422_7 PFAM YicC-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 303.0
MMS3_k127_3577422_8 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000002703 254.0
MMS3_k127_3577422_9 AsmA family K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000001035 256.0
MMS3_k127_3612755_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.471e-228 723.0
MMS3_k127_3612755_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 596.0
MMS3_k127_3612755_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 458.0
MMS3_k127_3612755_3 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 361.0
MMS3_k127_3612755_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 353.0
MMS3_k127_3612755_5 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 344.0
MMS3_k127_3612755_6 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000009745 246.0
MMS3_k127_3612755_7 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.00000000000000000000000000000000000000000000000000000000000007535 216.0
MMS3_k127_3612755_8 Preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000001002 144.0
MMS3_k127_3612755_9 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000005528 68.0
MMS3_k127_3750596_0 Belongs to the GcvT family K00302 - 1.5.3.1 0.0 1223.0
MMS3_k127_3750596_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1034.0
MMS3_k127_3750596_10 Sugar (and other) transporter K03446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 591.0
MMS3_k127_3750596_11 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 586.0
MMS3_k127_3750596_12 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 571.0
MMS3_k127_3750596_13 C-terminal AAA-associated domain K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 570.0
MMS3_k127_3750596_14 Neisseria PilC beta-propeller domain K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008946 578.0
MMS3_k127_3750596_15 PFAM Rh family protein ammonium transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 526.0
MMS3_k127_3750596_16 PFAM Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 516.0
MMS3_k127_3750596_17 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 503.0
MMS3_k127_3750596_18 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 501.0
MMS3_k127_3750596_19 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 502.0
MMS3_k127_3750596_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.914e-252 796.0
MMS3_k127_3750596_20 glutamine amidotransferase K22081 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 481.0
MMS3_k127_3750596_21 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 476.0
MMS3_k127_3750596_22 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 468.0
MMS3_k127_3750596_23 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 455.0
MMS3_k127_3750596_24 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 444.0
MMS3_k127_3750596_25 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 438.0
MMS3_k127_3750596_26 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 395.0
MMS3_k127_3750596_27 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 375.0
MMS3_k127_3750596_28 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 377.0
MMS3_k127_3750596_29 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 374.0
MMS3_k127_3750596_3 Belongs to the glutamate synthase family K00265,K22083 - 1.4.1.13,1.4.1.14,2.1.1.21 1.852e-247 768.0
MMS3_k127_3750596_30 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K07006,K22343 - 1.14.13.238 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 345.0
MMS3_k127_3750596_31 HlyD membrane-fusion protein of T1SS K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 337.0
MMS3_k127_3750596_32 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 336.0
MMS3_k127_3750596_33 TRANSCRIPTIONal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 318.0
MMS3_k127_3750596_34 Glutamate synthase K22082 - 2.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 317.0
MMS3_k127_3750596_35 C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells K17222,K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 316.0
MMS3_k127_3750596_37 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 295.0
MMS3_k127_3750596_38 RarD protein K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 295.0
MMS3_k127_3750596_39 PFAM PfkB domain protein K00846 - 2.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 288.0
MMS3_k127_3750596_4 glutamine synthetase K01915,K09470 - 6.3.1.11,6.3.1.2 7.392e-245 763.0
MMS3_k127_3750596_40 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006357 274.0
MMS3_k127_3750596_41 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006578 267.0
MMS3_k127_3750596_42 Secretion protein, HlyD K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001119 274.0
MMS3_k127_3750596_43 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006294 270.0
MMS3_k127_3750596_44 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000001791 256.0
MMS3_k127_3750596_45 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000000000000008037 249.0
MMS3_k127_3750596_46 Cellulose biosynthesis protein BcsQ - - - 0.00000000000000000000000000000000000000000000000000000000000004412 222.0
MMS3_k127_3750596_47 The glycine cleavage system catalyzes the degradation of glycine K00302,K00305,K00605,K06980 - 1.5.3.1,2.1.2.10 0.0000000000000000000000000000000000000000000000000000000001226 211.0
MMS3_k127_3750596_48 lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000675 196.0
MMS3_k127_3750596_49 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000002793 187.0
MMS3_k127_3750596_5 Binding-protein-dependent transport system inner membrane component K02050 - - 7.244e-234 737.0
MMS3_k127_3750596_50 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000002766 183.0
MMS3_k127_3750596_51 Transcriptional regulator, MarR K06075 - - 0.00000000000000000000000000000000000000000009234 163.0
MMS3_k127_3750596_52 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.000000000000000000000000000000000000000006931 162.0
MMS3_k127_3750596_53 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000005238 145.0
MMS3_k127_3750596_54 type 4 fimbrial biogenesis transmembrane K02672 - - 0.0000000000000000000000000000000000009202 148.0
MMS3_k127_3750596_55 transcriptional regulators - - - 0.000000000000000000000000000000000001338 145.0
MMS3_k127_3750596_56 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.00000000000000000000000000000000001172 141.0
MMS3_k127_3750596_57 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000000000000731 139.0
MMS3_k127_3750596_58 Sarcosine oxidase, delta subunit K00304 - 1.5.3.1 0.0000000000000000000000000000000001198 135.0
MMS3_k127_3750596_59 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000003291 134.0
MMS3_k127_3750596_6 Sarcosine oxidase, subunit beta K00303 - 1.5.3.1 2.338e-229 714.0
MMS3_k127_3750596_60 - K22344 - 1.14.13.238 0.000000000000000000000000000000007332 135.0
MMS3_k127_3750596_61 Ethanolamine utilisation protein EutQ - - - 0.000000000000000000000000000001239 124.0
MMS3_k127_3750596_62 - - - - 0.000000000000000000000000000001606 125.0
MMS3_k127_3750596_63 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02673 - - 0.000000000000000000000000000004797 126.0
MMS3_k127_3750596_64 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000005702 117.0
MMS3_k127_3750596_65 pilus assembly protein PilE K02655 - - 0.0000000000000000000000000291 113.0
MMS3_k127_3750596_66 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02671 - - 0.000000000000000000000009157 109.0
MMS3_k127_3750596_67 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.00000000000000000000001088 104.0
MMS3_k127_3750596_68 - - - - 0.00000000000000000005004 92.0
MMS3_k127_3750596_69 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K08084 - - 0.0000000000000000003036 94.0
MMS3_k127_3750596_7 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 1.004e-226 717.0
MMS3_k127_3750596_70 Conserved repeat domain - - - 0.000000000000000001921 102.0
MMS3_k127_3750596_71 PFAM CHAD domain containing protein - - - 0.0000000000000000386 93.0
MMS3_k127_3750596_72 - - - - 0.00000000000006467 77.0
MMS3_k127_3750596_73 - - - - 0.0000008651 59.0
MMS3_k127_3750596_74 - - - - 0.00002496 49.0
MMS3_k127_3750596_75 Response regulator, receiver - - - 0.0008767 48.0
MMS3_k127_3750596_8 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.139e-207 666.0
MMS3_k127_3750596_9 Sodium/hydrogen exchanger family K03316 - - 1.37e-202 647.0
MMS3_k127_3839962_0 ABC transporter, transmembrane region K11085 - - 1.546e-205 658.0
MMS3_k127_3839962_1 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 534.0
MMS3_k127_3839962_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 478.0
MMS3_k127_3839962_3 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 433.0
MMS3_k127_3839962_4 Probable transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 410.0
MMS3_k127_3839962_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000001341 79.0
MMS3_k127_4128196_0 AAA ATPase domain - - - 1.286e-307 952.0
MMS3_k127_4128196_1 UvrD-like helicase C-terminal domain - - - 6.935e-263 818.0
MMS3_k127_4128196_10 involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000003587 168.0
MMS3_k127_4128196_11 Carbon-nitrogen hydrolase K01426 - 3.5.1.4 0.00000000000000000000003926 98.0
MMS3_k127_4128196_12 PQ loop repeat K15383 - - 0.0000000000000000001857 90.0
MMS3_k127_4128196_13 sequence-specific DNA binding - - - 0.0000000000000002477 81.0
MMS3_k127_4128196_14 Cytochrome c, class I K08738 - - 0.0000000004018 67.0
MMS3_k127_4128196_2 Permease for cytosine/purines, uracil, thiamine, allantoin K10974 - - 2.062e-243 758.0
MMS3_k127_4128196_3 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 7.286e-234 730.0
MMS3_k127_4128196_4 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 5.44e-215 668.0
MMS3_k127_4128196_5 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates K01426,K01455 GO:0003674,GO:0003824,GO:0004040,GO:0016787,GO:0016810,GO:0016811 3.5.1.4,3.5.1.49 2.382e-206 643.0
MMS3_k127_4128196_6 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 379.0
MMS3_k127_4128196_7 molybdenum ion binding K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009423 358.0
MMS3_k127_4128196_8 T5orf172 - - - 0.0000000000000000000000000000000000000000000000001617 185.0
MMS3_k127_4128196_9 -acetyltransferase - - - 0.000000000000000000000000000000000000000000006775 169.0
MMS3_k127_4149637_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2306.0
MMS3_k127_4149637_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2202.0
MMS3_k127_4149637_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000000000000000000001222 141.0
MMS3_k127_4149637_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000001567 85.0
MMS3_k127_4149637_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000001308 76.0
MMS3_k127_4149637_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1223.0
MMS3_k127_4149637_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 370.0
MMS3_k127_4149637_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 316.0
MMS3_k127_4149637_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004169 265.0
MMS3_k127_4149637_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001652 249.0
MMS3_k127_4149637_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008106 242.0
MMS3_k127_4149637_8 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000007458 231.0
MMS3_k127_4149637_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000001979 197.0
MMS3_k127_4254557_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1382.0
MMS3_k127_4254557_1 DNA segregation ATPase FtsK SpoIIIE K03466 - - 3.338e-315 981.0
MMS3_k127_4254557_10 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 492.0
MMS3_k127_4254557_11 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 485.0
MMS3_k127_4254557_12 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 457.0
MMS3_k127_4254557_13 Glutathione S-transferase K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 446.0
MMS3_k127_4254557_14 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 404.0
MMS3_k127_4254557_15 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 401.0
MMS3_k127_4254557_16 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 376.0
MMS3_k127_4254557_17 transcriptional regulator K13634 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 353.0
MMS3_k127_4254557_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 330.0
MMS3_k127_4254557_19 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006845 318.0
MMS3_k127_4254557_2 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 6.848e-296 930.0
MMS3_k127_4254557_20 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 310.0
MMS3_k127_4254557_21 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 304.0
MMS3_k127_4254557_22 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 297.0
MMS3_k127_4254557_23 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 294.0
MMS3_k127_4254557_24 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008608 254.0
MMS3_k127_4254557_25 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001699 231.0
MMS3_k127_4254557_26 phosphoribosyltransferase K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000001624 218.0
MMS3_k127_4254557_27 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000002104 189.0
MMS3_k127_4254557_28 mercury ion transmembrane transporter activity K07213 - - 0.00000000000000000000000000000000000000000000000002436 182.0
MMS3_k127_4254557_29 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000003986 179.0
MMS3_k127_4254557_3 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381 - 1.8.1.2 1.465e-232 734.0
MMS3_k127_4254557_30 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000002863 170.0
MMS3_k127_4254557_31 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000325 137.0
MMS3_k127_4254557_32 - - - - 0.00000000000000000000000004456 112.0
MMS3_k127_4254557_33 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000000005219 107.0
MMS3_k127_4254557_35 Protein of unknown function (DUF2892) - - - 0.000000000000000004059 85.0
MMS3_k127_4254557_36 - - - - 0.00000000006513 66.0
MMS3_k127_4254557_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 5.048e-212 676.0
MMS3_k127_4254557_5 AAA ATPase, central domain protein K07478 - - 5.75e-196 619.0
MMS3_k127_4254557_6 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component K00380 - 1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 616.0
MMS3_k127_4254557_7 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 529.0
MMS3_k127_4254557_8 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 514.0
MMS3_k127_4254557_9 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 518.0
MMS3_k127_4274789_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1103.0
MMS3_k127_4274789_1 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 2.609e-282 879.0
MMS3_k127_4274789_10 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 7.055e-224 709.0
MMS3_k127_4274789_11 Belongs to the glycosyl hydrolase 57 family - - - 2.312e-213 678.0
MMS3_k127_4274789_12 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 8.609e-209 653.0
MMS3_k127_4274789_13 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 9.899e-204 640.0
MMS3_k127_4274789_14 homoserine dehydrogenase K00003 - 1.1.1.3 2.602e-197 623.0
MMS3_k127_4274789_15 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 609.0
MMS3_k127_4274789_16 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 604.0
MMS3_k127_4274789_17 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 515.0
MMS3_k127_4274789_18 oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 501.0
MMS3_k127_4274789_19 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 452.0
MMS3_k127_4274789_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.237e-280 872.0
MMS3_k127_4274789_20 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030312,GO:0030313,GO:0031975,GO:0043170,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 456.0
MMS3_k127_4274789_21 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 451.0
MMS3_k127_4274789_22 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 427.0
MMS3_k127_4274789_23 TIGRFAM RNA polymerase sigma factor RpoS K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 416.0
MMS3_k127_4274789_24 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 413.0
MMS3_k127_4274789_25 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 406.0
MMS3_k127_4274789_26 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 372.0
MMS3_k127_4274789_27 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 357.0
MMS3_k127_4274789_28 PFAM Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 341.0
MMS3_k127_4274789_29 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 325.0
MMS3_k127_4274789_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.927e-250 779.0
MMS3_k127_4274789_30 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 321.0
MMS3_k127_4274789_31 PFAM UbiA prenyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 310.0
MMS3_k127_4274789_32 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 310.0
MMS3_k127_4274789_33 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 304.0
MMS3_k127_4274789_34 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003073 275.0
MMS3_k127_4274789_35 Short-chain dehydrogenase reductase (SDR) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005747 271.0
MMS3_k127_4274789_36 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000138 268.0
MMS3_k127_4274789_37 subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000001249 231.0
MMS3_k127_4274789_38 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000001287 220.0
MMS3_k127_4274789_39 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000001526 220.0
MMS3_k127_4274789_4 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 5.089e-240 773.0
MMS3_k127_4274789_40 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000004323 215.0
MMS3_k127_4274789_41 CYTH K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000004698 202.0
MMS3_k127_4274789_42 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000005604 199.0
MMS3_k127_4274789_43 peptidase K06194 - - 0.00000000000000000000000000000000000000000000000000003789 196.0
MMS3_k127_4274789_44 low molecular weight K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000002532 189.0
MMS3_k127_4274789_45 Smr domain - - - 0.0000000000000000000000000000000000000000000005114 172.0
MMS3_k127_4274789_46 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000007946 134.0
MMS3_k127_4274789_47 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000000001947 127.0
MMS3_k127_4274789_48 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000001939 119.0
MMS3_k127_4274789_49 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000000000000000000001488 109.0
MMS3_k127_4274789_5 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 2.153e-238 743.0
MMS3_k127_4274789_50 cytotoxic translational repressor of toxin-antitoxin K06218 - - 0.000000000000000000001158 98.0
MMS3_k127_4274789_51 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000211 100.0
MMS3_k127_4274789_52 - - - - 0.0000000000004346 71.0
MMS3_k127_4274789_55 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.0000489 46.0
MMS3_k127_4274789_56 - - - - 0.0001199 44.0
MMS3_k127_4274789_57 cyd operon protein YbgE - - - 0.0006157 48.0
MMS3_k127_4274789_6 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 4.329e-231 721.0
MMS3_k127_4274789_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 1.265e-230 718.0
MMS3_k127_4274789_8 oxidase, subunit K00425 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0022900,GO:0022904,GO:0032991,GO:0044237,GO:0044464,GO:0045333,GO:0055114,GO:0070069,GO:0071944 1.10.3.14 4.766e-230 723.0
MMS3_k127_4274789_9 aminotransferase class I and II K14261 - - 2.443e-225 701.0
MMS3_k127_4333028_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02298 - 1.10.3.10 0.0 1010.0
MMS3_k127_4333028_1 Glucan 1,4-alpha-glucosidase K01178 - 3.2.1.3 2.69e-279 878.0
MMS3_k127_4333028_10 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 303.0
MMS3_k127_4333028_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 285.0
MMS3_k127_4333028_12 Cytochrome c oxidase subunit III K02299 - - 0.000000000000000000000000000000000000000000000000000000000000001573 224.0
MMS3_k127_4333028_13 Membrane protease subunits, stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000004811 127.0
MMS3_k127_4333028_14 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor K02300 - - 0.000000000000000000000000001374 115.0
MMS3_k127_4333028_15 Belongs to the 'phage' integrase family - - - 0.00000000000000000000001664 103.0
MMS3_k127_4333028_16 ribosome binding - - - 0.0000000000006492 72.0
MMS3_k127_4333028_17 TIGRFAM transposase, IS605 OrfB family - - - 0.000005221 56.0
MMS3_k127_4333028_18 - - - - 0.000007319 55.0
MMS3_k127_4333028_19 Group II intron, maturase-specific domain K00986 - 2.7.7.49 0.00003723 46.0
MMS3_k127_4333028_2 ABC transporter K16013 - - 8.113e-211 670.0
MMS3_k127_4333028_20 - - - - 0.00008185 48.0
MMS3_k127_4333028_3 ABC transporter K16012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 599.0
MMS3_k127_4333028_4 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 487.0
MMS3_k127_4333028_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 442.0
MMS3_k127_4333028_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 383.0
MMS3_k127_4333028_7 Group II intron, maturase-specific domain K00986 - 2.7.7.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 351.0
MMS3_k127_4333028_8 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 342.0
MMS3_k127_4333028_9 PFAM cytochrome c oxidase subunit II K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 319.0
MMS3_k127_595875_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1477.0
MMS3_k127_595875_1 Domain of unknown function (DUF3458_C) ARM repeats K01256,K08776 - 3.4.11.2 0.0 1030.0
MMS3_k127_595875_10 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 396.0
MMS3_k127_595875_11 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 384.0
MMS3_k127_595875_12 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 376.0
MMS3_k127_595875_13 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 373.0
MMS3_k127_595875_14 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 361.0
MMS3_k127_595875_15 YHYH protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 351.0
MMS3_k127_595875_16 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 334.0
MMS3_k127_595875_17 O-methyltransferase activity K05303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 331.0
MMS3_k127_595875_18 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 306.0
MMS3_k127_595875_19 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 298.0
MMS3_k127_595875_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 1.083e-198 624.0
MMS3_k127_595875_20 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003869 278.0
MMS3_k127_595875_21 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000001927 236.0
MMS3_k127_595875_22 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000003053 225.0
MMS3_k127_595875_23 receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000001384 243.0
MMS3_k127_595875_24 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000006148 202.0
MMS3_k127_595875_25 - - - - 0.000000000000000000000000000000000000000000000000000000009232 201.0
MMS3_k127_595875_26 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000001015 208.0
MMS3_k127_595875_27 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000001237 168.0
MMS3_k127_595875_28 Universal stress protein K06149 - - 0.0000000000000000000000000000000000000000003854 162.0
MMS3_k127_595875_29 - - - - 0.000000000000000000000000000000000000003843 155.0
MMS3_k127_595875_3 HemN C-terminal domain - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 572.0
MMS3_k127_595875_30 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000000000000000000000001436 147.0
MMS3_k127_595875_31 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000000000014 136.0
MMS3_k127_595875_32 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000003648 144.0
MMS3_k127_595875_34 - - - - 0.00000000000000000005793 91.0
MMS3_k127_595875_35 Helix-turn-helix domain of resolvase K14060 - - 0.000000000000000003667 87.0
MMS3_k127_595875_36 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000002106 76.0
MMS3_k127_595875_37 Domain of unknown function (DUF202) K00389 - - 0.00000000000007685 77.0
MMS3_k127_595875_38 TIGRFAM transposase, IS605 OrfB family - - - 0.000000002705 58.0
MMS3_k127_595875_39 Resolvase, N terminal domain - - - 0.0000002099 53.0
MMS3_k127_595875_4 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 540.0
MMS3_k127_595875_40 Extradiol ring-cleavage dioxygenase, class III K15777 - - 0.00000858 54.0
MMS3_k127_595875_5 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 533.0
MMS3_k127_595875_6 Alkaline and neutral invertase K01193 - 3.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 522.0
MMS3_k127_595875_7 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 499.0
MMS3_k127_595875_8 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 480.0
MMS3_k127_595875_9 pfam rok K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 395.0
MMS3_k127_597077_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1392.0
MMS3_k127_597077_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1172.0
MMS3_k127_597077_10 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 4.317e-243 773.0
MMS3_k127_597077_100 LysR substrate binding domain - - - 0.0000000000000000000002743 99.0
MMS3_k127_597077_101 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.000000000000000000007478 102.0
MMS3_k127_597077_102 HEPN domain - - - 0.000000000000000005993 87.0
MMS3_k127_597077_103 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000001378 89.0
MMS3_k127_597077_104 Tetratricopeptide repeat - - - 0.00000000000000004677 87.0
MMS3_k127_597077_105 Cytochrome c K17223 - - 0.0000000000000004897 83.0
MMS3_k127_597077_106 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000002369 74.0
MMS3_k127_597077_107 Zinc-binding dehydrogenase - - - 0.000000000003413 70.0
MMS3_k127_597077_108 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000006352 68.0
MMS3_k127_597077_109 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000003117 68.0
MMS3_k127_597077_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.069e-229 733.0
MMS3_k127_597077_110 Transposase - - - 0.000000001549 64.0
MMS3_k127_597077_111 HTH-like domain K07497 - - 0.00000001333 56.0
MMS3_k127_597077_112 PFAM DsrE DsrF-like family K09004 - - 0.0000001649 59.0
MMS3_k127_597077_114 peroxiredoxin activity - - - 0.000003874 53.0
MMS3_k127_597077_115 COG1064 Zn-dependent alcohol dehydrogenases - - - 0.00003259 46.0
MMS3_k127_597077_116 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.00004872 46.0
MMS3_k127_597077_12 Mechanosensitive ion channel - - - 5.902e-221 711.0
MMS3_k127_597077_13 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.845e-217 685.0
MMS3_k127_597077_14 Helicase K03722 - 3.6.4.12 2.597e-211 676.0
MMS3_k127_597077_15 PFAM ABC transporter K01990,K01992,K09695 - - 1.686e-203 652.0
MMS3_k127_597077_16 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 599.0
MMS3_k127_597077_17 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 597.0
MMS3_k127_597077_18 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 596.0
MMS3_k127_597077_19 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 592.0
MMS3_k127_597077_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1017.0
MMS3_k127_597077_20 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 560.0
MMS3_k127_597077_21 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 556.0
MMS3_k127_597077_22 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 514.0
MMS3_k127_597077_23 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 517.0
MMS3_k127_597077_24 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 506.0
MMS3_k127_597077_25 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 519.0
MMS3_k127_597077_26 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 481.0
MMS3_k127_597077_27 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 482.0
MMS3_k127_597077_28 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 490.0
MMS3_k127_597077_29 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 475.0
MMS3_k127_597077_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.091e-318 1000.0
MMS3_k127_597077_30 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 465.0
MMS3_k127_597077_31 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 459.0
MMS3_k127_597077_32 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 461.0
MMS3_k127_597077_33 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 458.0
MMS3_k127_597077_34 Abc-type multidrug transport system, permease component K01992 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 457.0
MMS3_k127_597077_35 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 451.0
MMS3_k127_597077_36 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 449.0
MMS3_k127_597077_37 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 424.0
MMS3_k127_597077_38 PFAM oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 422.0
MMS3_k127_597077_39 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0000166,GO:0003674,GO:0005215,GO:0005315,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008144,GO:0008150,GO:0010921,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0017076,GO:0019220,GO:0019222,GO:0022804,GO:0022857,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035303,GO:0035435,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0055085,GO:0065007,GO:0065009,GO:0071944,GO:0097159,GO:0097367,GO:0098656,GO:0098660,GO:0098661,GO:1901265,GO:1901363 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 420.0
MMS3_k127_597077_4 phosphorylase K00688 - 2.4.1.1 2.516e-318 997.0
MMS3_k127_597077_40 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 406.0
MMS3_k127_597077_41 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 385.0
MMS3_k127_597077_42 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 387.0
MMS3_k127_597077_43 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 374.0
MMS3_k127_597077_44 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007274 371.0
MMS3_k127_597077_45 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 353.0
MMS3_k127_597077_46 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 365.0
MMS3_k127_597077_47 ATPase (AAA superfamily) K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 353.0
MMS3_k127_597077_48 Belongs to the carbohydrate kinase PfkB family K16370 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007767 355.0
MMS3_k127_597077_49 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 339.0
MMS3_k127_597077_5 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 6.743e-314 969.0
MMS3_k127_597077_50 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 332.0
MMS3_k127_597077_51 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 331.0
MMS3_k127_597077_52 Citation J Bacteriol. 2002 Dec - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 326.0
MMS3_k127_597077_53 Permease YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 325.0
MMS3_k127_597077_54 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008168 318.0
MMS3_k127_597077_55 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 317.0
MMS3_k127_597077_56 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 324.0
MMS3_k127_597077_57 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 304.0
MMS3_k127_597077_58 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 294.0
MMS3_k127_597077_59 Prolyl oligopeptidase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 289.0
MMS3_k127_597077_6 ABC transporter - - - 2.813e-303 936.0
MMS3_k127_597077_60 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 295.0
MMS3_k127_597077_61 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003345 272.0
MMS3_k127_597077_62 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006212 270.0
MMS3_k127_597077_63 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000003046 277.0
MMS3_k127_597077_64 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008108 262.0
MMS3_k127_597077_65 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002953 255.0
MMS3_k127_597077_66 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000001461 244.0
MMS3_k127_597077_67 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000007742 234.0
MMS3_k127_597077_68 PFAM Peptidase M22, glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000004843 228.0
MMS3_k127_597077_69 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000009195 232.0
MMS3_k127_597077_7 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.822e-285 882.0
MMS3_k127_597077_70 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000002236 222.0
MMS3_k127_597077_71 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000004825 228.0
MMS3_k127_597077_72 cytochrome c1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000002272 220.0
MMS3_k127_597077_73 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000328 206.0
MMS3_k127_597077_74 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000000000000000000000000003421 203.0
MMS3_k127_597077_75 - - - - 0.000000000000000000000000000000000000000000000000000000003687 204.0
MMS3_k127_597077_76 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000002562 204.0
MMS3_k127_597077_77 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000489 199.0
MMS3_k127_597077_78 Inner membrane component domain - - - 0.000000000000000000000000000000000000000000000000003492 184.0
MMS3_k127_597077_79 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000004501 184.0
MMS3_k127_597077_8 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 6.949e-261 821.0
MMS3_k127_597077_80 PLD-like domain - - - 0.00000000000000000000000000000000000000000000001621 181.0
MMS3_k127_597077_81 protein conserved in archaea - - - 0.00000000000000000000000000000000000000000000002545 175.0
MMS3_k127_597077_82 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000003619 173.0
MMS3_k127_597077_83 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000000000000000002492 161.0
MMS3_k127_597077_84 Nucleotidyltransferase domain - - - 0.00000000000000000000000000000000000000004675 156.0
MMS3_k127_597077_85 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000001901 158.0
MMS3_k127_597077_86 n-acetyltransferase - - - 0.00000000000000000000000000000000000003952 148.0
MMS3_k127_597077_87 - - - - 0.0000000000000000000000000000000000001803 144.0
MMS3_k127_597077_88 - - - - 0.0000000000000000000000000000000000001967 154.0
MMS3_k127_597077_89 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000005066 148.0
MMS3_k127_597077_9 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.183e-256 797.0
MMS3_k127_597077_90 RDD family - - - 0.00000000000000000000000000000000003142 139.0
MMS3_k127_597077_91 Belongs to the ArsC family - - - 0.000000000000000000000000000000000415 135.0
MMS3_k127_597077_92 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.0000000000000000000000000000008207 126.0
MMS3_k127_597077_93 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000001095 126.0
MMS3_k127_597077_94 membrane transporter protein K07090 - - 0.0000000000000000000000000001945 126.0
MMS3_k127_597077_95 Universal stress protein - - - 0.0000000000000000000000002959 110.0
MMS3_k127_597077_96 DNA polymerase III, chi subunit K02339 GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 0.000000000000000000000008016 106.0
MMS3_k127_597077_97 Protein of unknown function (DUF2892) - - - 0.00000000000000000000001104 101.0
MMS3_k127_597077_98 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000005058 102.0
MMS3_k127_597077_99 Product type h extrachromosomal origin K07497 - - 0.00000000000000000000005251 100.0
MMS3_k127_661051_0 Belongs to the UPF0753 family K09822 - - 1.496e-288 907.0
MMS3_k127_661051_1 DEAD-like helicases superfamily - - - 1.721e-270 874.0
MMS3_k127_661051_10 - - - - 0.0000000000000000000000000000000000000000000000000000007441 198.0
MMS3_k127_661051_11 Plasmid recombination enzyme - - - 0.000000000000000000000000000000000000000000000000000001336 203.0
MMS3_k127_661051_12 BMC - - - 0.000000000000000000000000000000000001318 139.0
MMS3_k127_661051_13 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.00000000000000000000000000000000002661 139.0
MMS3_k127_661051_15 - - - - 0.0000000000000000000006048 103.0
MMS3_k127_661051_16 Pterin 4 alpha carbinolamine dehydratase - - - 0.00000000000000000008891 93.0
MMS3_k127_661051_17 - - - - 0.0000000000000000004122 87.0
MMS3_k127_661051_18 Membrane fusogenic activity K09806 - - 0.000000000000000001947 88.0
MMS3_k127_661051_19 - - - - 0.00000000000000000244 91.0
MMS3_k127_661051_2 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K05577 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 557.0
MMS3_k127_661051_22 AAA domain - - - 0.0003847 46.0
MMS3_k127_661051_3 Domain of unknown function(DUF2779) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 548.0
MMS3_k127_661051_4 LysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 477.0
MMS3_k127_661051_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 492.0
MMS3_k127_661051_6 Product type h extrachromosomal origin K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 402.0
MMS3_k127_661051_7 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 350.0
MMS3_k127_661051_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 346.0
MMS3_k127_661051_9 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000001477 216.0
MMS3_k127_682323_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1149.0
MMS3_k127_682323_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 6.041e-244 764.0
MMS3_k127_682323_10 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 344.0
MMS3_k127_682323_11 enzyme of heme biosynthesis K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 325.0
MMS3_k127_682323_12 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 317.0
MMS3_k127_682323_13 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 304.0
MMS3_k127_682323_14 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 289.0
MMS3_k127_682323_15 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005591 282.0
MMS3_k127_682323_16 Probable transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003783 259.0
MMS3_k127_682323_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001023 258.0
MMS3_k127_682323_18 LytTr DNA-binding domain K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002239 251.0
MMS3_k127_682323_19 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000002559 237.0
MMS3_k127_682323_2 argininosuccinate lyase K01755 - 4.3.2.1 2.3e-217 682.0
MMS3_k127_682323_20 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000001393 199.0
MMS3_k127_682323_21 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000002564 167.0
MMS3_k127_682323_22 Sterol-binding domain protein K03690 - - 0.00000000000000000000000000000000002768 142.0
MMS3_k127_682323_23 Sulfurtransferase TusA - - - 0.00000000000000000000000000000001414 127.0
MMS3_k127_682323_24 - - - - 0.000000000000000000000000000002777 124.0
MMS3_k127_682323_25 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.0000000000000000000000000004113 128.0
MMS3_k127_682323_26 Protein of unknown function (DUF2905) - - - 0.000000000000000004971 87.0
MMS3_k127_682323_27 - - - - 0.0000004605 59.0
MMS3_k127_682323_28 small periplasmic lipoprotein - - - 0.0003881 44.0
MMS3_k127_682323_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.246e-205 646.0
MMS3_k127_682323_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 610.0
MMS3_k127_682323_5 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 500.0
MMS3_k127_682323_6 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 478.0
MMS3_k127_682323_7 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 471.0
MMS3_k127_682323_8 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 397.0
MMS3_k127_682323_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 377.0
MMS3_k127_692002_0 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000001105 173.0
MMS3_k127_692002_1 Probable transposase - - - 0.0000000000000000000000000001647 114.0
MMS3_k127_692002_2 the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells K01840 - 5.4.2.8 0.0000000000000000000000000002094 128.0
MMS3_k127_692002_3 Smr domain - - - 0.00000000000000000000000001317 114.0
MMS3_k127_693681_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1466.0
MMS3_k127_693681_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1116.0
MMS3_k127_693681_10 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.23e-218 686.0
MMS3_k127_693681_11 ABC transporter K15738 - - 1.395e-215 687.0
MMS3_k127_693681_12 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 5.157e-212 670.0
MMS3_k127_693681_13 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 590.0
MMS3_k127_693681_14 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 567.0
MMS3_k127_693681_15 PFAM histone deacetylase superfamily K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 526.0
MMS3_k127_693681_16 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 445.0
MMS3_k127_693681_17 Amino acid permease K20265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 458.0
MMS3_k127_693681_18 P-type ATPase' K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 434.0
MMS3_k127_693681_19 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 419.0
MMS3_k127_693681_2 von Willebrand factor (vWF) type A domain - - - 0.0 1030.0
MMS3_k127_693681_20 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 419.0
MMS3_k127_693681_21 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 396.0
MMS3_k127_693681_22 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 351.0
MMS3_k127_693681_23 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 333.0
MMS3_k127_693681_24 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 287.0
MMS3_k127_693681_25 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 285.0
MMS3_k127_693681_26 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000275 268.0
MMS3_k127_693681_27 PFAM biotin lipoate A B protein ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003393 270.0
MMS3_k127_693681_28 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006875 259.0
MMS3_k127_693681_29 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001509 262.0
MMS3_k127_693681_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1018.0
MMS3_k127_693681_30 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001159 259.0
MMS3_k127_693681_31 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000003346 222.0
MMS3_k127_693681_32 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000004141 221.0
MMS3_k127_693681_33 Transposase K07491 - - 0.00000000000000000000000000000000000000000000000000000000000005219 216.0
MMS3_k127_693681_34 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000001567 197.0
MMS3_k127_693681_35 - - - - 0.0000000000000000000000000000000000000000000000000000003349 198.0
MMS3_k127_693681_36 - - - - 0.000000000000000000000000000000000000000000000000000001401 193.0
MMS3_k127_693681_37 membrane - - - 0.000000000000000000000000000000000000000000000000002588 194.0
MMS3_k127_693681_38 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000006443 181.0
MMS3_k127_693681_39 - - - - 0.00000000000000000000000000000000000000000000188 166.0
MMS3_k127_693681_4 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.757e-303 945.0
MMS3_k127_693681_40 MerR, DNA binding K08365,K19591,K19592 - - 0.000000000000000000000000000000000000000002729 158.0
MMS3_k127_693681_41 - - - - 0.00000000000000000000000000000000000000005841 155.0
MMS3_k127_693681_42 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000138 133.0
MMS3_k127_693681_43 Metal-dependent hydrolase K07043 - - 0.0000000000000000000000000000000001715 141.0
MMS3_k127_693681_44 regulatory protein, FmdB family - - - 0.00000000000000000000005642 101.0
MMS3_k127_693681_45 Transposase K07491 - - 0.0000000000000000000001643 100.0
MMS3_k127_693681_46 Carbon-nitrogen hydrolase K01426 - 3.5.1.4 0.00000000000000000003086 90.0
MMS3_k127_693681_47 Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors K12973 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009279,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016409,GO:0016416,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044462,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.251 0.0000000000000000001546 95.0
MMS3_k127_693681_48 protein conserved in bacteria K09912 - - 0.00000000000000002405 90.0
MMS3_k127_693681_49 Glycosyl transferase, family 2 - - - 0.000000009947 58.0
MMS3_k127_693681_5 Belongs to the purine-cytosine permease (2.A.39) family - - - 2.066e-266 831.0
MMS3_k127_693681_6 Belongs to the GPI family K01810 - 5.3.1.9 4.746e-253 790.0
MMS3_k127_693681_7 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.732e-231 725.0
MMS3_k127_693681_8 Pyridoxal-dependent decarboxylase conserved domain K01580 - 4.1.1.15 3.192e-228 714.0
MMS3_k127_693681_9 Acetamidase/Formamidase family K01455 - 3.5.1.49 4.169e-223 696.0
MMS3_k127_693851_0 AraC family transcriptional regulator - - - 7.111e-276 870.0
MMS3_k127_693851_1 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K02029,K09972,K10004 - 3.6.3.21 3.202e-210 665.0
MMS3_k127_693851_10 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000003505 204.0
MMS3_k127_693851_11 Protein of unknown function (DUF1810) - - - 0.0000000000000000000000000000000000000000000000000000001979 197.0
MMS3_k127_693851_12 - - - - 0.000000000000000000000000000000000000000000000000001194 193.0
MMS3_k127_693851_13 Carbon-nitrogen hydrolase K01426 - 3.5.1.4 0.00000000000000000002383 90.0
MMS3_k127_693851_15 transposition - - - 0.0006314 45.0
MMS3_k127_693851_2 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 587.0
MMS3_k127_693851_3 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 478.0
MMS3_k127_693851_4 PFAM DNA-repair protein, UmuC-like K03502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 421.0
MMS3_k127_693851_5 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 387.0
MMS3_k127_693851_6 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 327.0
MMS3_k127_693851_7 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002483 286.0
MMS3_k127_693851_8 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000004582 212.0
MMS3_k127_693851_9 Peptidase S24-like K03503 - - 0.00000000000000000000000000000000000000000000000000000000006989 211.0
MMS3_k127_879165_0 Nacht domain - - - 0.0 1976.0
MMS3_k127_879165_1 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 479.0
MMS3_k127_879165_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 413.0
MMS3_k127_879165_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 348.0
MMS3_k127_879165_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005412 255.0